data_PU1
#
_chem_comp.id PU1
_chem_comp.name 8-(2-CHLORO-3,4,5-TRIMETHOXY-BENZYL)-2-FLUORO-9-PENT-4-YLNYL-9H-PURIN-6-YLAMINE
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C20 H21 Cl F N5 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2004-03-02
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 433.864
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code PU1
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1UYF
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
PU1 CL CL CL 0 0 N N N N N N 2.312 14.068 24.315 -1.843 -2.085 -2.090 CL PU1 1
PU1 C13 C13 C 0 1 Y N N N N N 3.898 13.292 24.210 -0.568 -0.945 -2.385 C13 PU1 2
PU1 C15 C15 C 0 1 Y N N N N N 5.026 13.911 24.711 -0.584 -0.170 -3.536 C15 PU1 3
PU1 O3 O3 O 0 1 N N N N N N 5.119 15.139 25.358 -1.598 -0.304 -4.433 O3 PU1 4
PU1 C20 C20 C 0 1 N N N N N N 4.126 15.723 26.135 -1.168 -1.262 -5.403 C20 PU1 5
PU1 C17 C17 C 0 1 Y N N N N N 6.265 13.367 24.631 0.434 0.745 -3.769 C17 PU1 6
PU1 O2 O2 O 0 1 N N N N N N 7.309 14.087 25.213 0.422 1.507 -4.896 O2 PU1 7
PU1 C19 C19 C 0 1 N N N N N N 7.766 15.271 24.572 -0.311 2.693 -4.586 C19 PU1 8
PU1 C16 C16 C 0 1 Y N N N N N 6.502 12.195 24.043 1.470 0.875 -2.852 C16 PU1 9
PU1 O1 O1 O 0 1 N N N N N N 7.834 11.733 24.106 2.471 1.767 -3.077 O1 PU1 10
PU1 C18 C18 C 0 1 N N N N N N 8.181 10.708 23.156 3.368 1.672 -1.969 C18 PU1 11
PU1 C14 C14 C 0 1 Y N N N N N 5.427 11.507 23.502 1.479 0.097 -1.704 C14 PU1 12
PU1 C12 C12 C 0 1 Y N N N N N 4.140 12.043 23.572 0.462 -0.809 -1.473 C12 PU1 13
PU1 C6 C6 C 0 1 N N N N N N 3.041 11.215 22.947 0.476 -1.652 -0.224 C6 PU1 14
PU1 C5 C5 C 0 1 Y N N N N N 1.830 11.015 23.812 -0.258 -0.931 0.876 C5 PU1 15
PU1 N3 N3 N 0 1 Y N N N N N 0.627 11.445 23.560 -1.531 -1.038 1.119 N3 PU1 16
PU1 C2 C2 C 0 1 Y N N N N N -0.175 10.972 24.673 -1.856 -0.254 2.176 C2 PU1 17
PU1 C3 C3 C 0 1 Y N N N N N -1.484 11.134 24.956 -3.046 0.024 2.869 C3 PU1 18
PU1 N5 N5 N 0 1 N N N N N N -2.457 11.808 24.125 -4.240 -0.567 2.493 N5 PU1 19
PU1 C1 C1 C 0 1 Y N N N N N 0.583 10.314 25.577 -0.676 0.375 2.603 C1 PU1 20
PU1 N1 N1 N 0 1 Y N N N N N 0.147 9.843 26.705 -0.725 1.207 3.639 N1 PU1 21
PU1 C4 C4 C 0 1 Y N N N N N -1.136 10.008 26.953 -1.864 1.440 4.260 C4 PU1 22
PU1 N2 N2 N 0 1 Y N N N N N -1.897 10.605 26.099 -3.000 0.869 3.894 N2 PU1 23
PU1 N4 N4 N 0 1 Y N N N N N 1.923 10.326 25.099 0.315 -0.074 1.769 N4 PU1 24
PU1 C7 C7 C 0 1 N N N N N N 3.088 9.660 25.708 1.731 0.297 1.826 C7 PU1 25
PU1 C8 C8 C 0 1 N N N N N N 2.951 8.151 25.609 2.478 -0.673 2.742 C8 PU1 26
PU1 C9 C9 C 0 1 N N N N N N 3.390 7.480 24.336 3.956 -0.284 2.802 C9 PU1 27
PU1 C10 C10 C 0 1 N N N N N N 4.780 7.767 23.748 4.674 -1.219 3.683 C10 PU1 28
PU1 C11 C11 C 0 1 N N N N N N 5.823 8.036 23.268 5.247 -1.964 4.386 C11 PU1 29
PU1 F F F 0 1 N N N N N N -1.696 9.551 28.095 -1.872 2.291 5.309 F PU1 30
PU1 H201 1H20 H 0 0 N N N N N N 4.201 16.707 26.654 -1.940 -1.380 -6.163 H201 PU1 31
PU1 H202 2H20 H 0 0 N N N N N N 3.853 14.974 26.915 -0.247 -0.916 -5.871 H202 PU1 32
PU1 H203 3H20 H 0 0 N N N N N N 3.212 15.769 25.498 -0.990 -2.219 -4.913 H203 PU1 33
PU1 H191 1H19 H 0 0 N N N N N N 8.600 15.846 25.037 -0.315 3.355 -5.452 H191 PU1 34
PU1 H192 2H19 H 0 0 N N N N N N 6.899 15.955 24.418 -1.336 2.429 -4.326 H192 PU1 35
PU1 H193 3H19 H 0 0 N N N N N N 8.040 15.028 23.519 0.157 3.200 -3.743 H193 PU1 36
PU1 H181 1H18 H 0 0 N N N N N N 9.233 10.343 23.206 4.191 2.373 -2.105 H181 PU1 37
PU1 H182 2H18 H 0 0 N N N N N N 7.945 11.051 22.122 2.835 1.912 -1.049 H182 PU1 38
PU1 H183 3H18 H 0 0 N N N N N N 7.475 9.850 23.246 3.761 0.657 -1.906 H183 PU1 39
PU1 H14 H14 H 0 1 N N N N N N 5.589 10.531 23.014 2.282 0.201 -0.989 H14 PU1 40
PU1 H6C1 1H6C H 0 0 N N N N N N 3.443 10.230 22.613 -0.013 -2.605 -0.423 H6C1 PU1 41
PU1 H6C2 2H6C H 0 0 N N N N N N 2.745 11.648 21.963 1.506 -1.830 0.082 H6C2 PU1 42
PU1 H5N1 1H5N H 0 0 N N N N N N -3.447 11.931 24.339 -5.055 -0.366 2.979 H5N1 PU1 43
PU1 H5N2 2H5N H 0 0 N N N N N N -2.139 12.215 23.245 -4.261 -1.182 1.744 H5N2 PU1 44
PU1 H7C1 1H7C H 0 0 N N N N N N 3.253 9.993 26.759 2.159 0.254 0.824 H7C1 PU1 45
PU1 H7C2 2H7C H 0 0 N N N N N N 4.047 10.019 25.267 1.825 1.311 2.217 H7C2 PU1 46
PU1 H8C1 1H8C H 0 0 N N N N N N 1.895 7.866 25.826 2.050 -0.629 3.744 H8C1 PU1 47
PU1 H8C2 2H8C H 0 0 N N N N N N 3.480 7.680 26.470 2.384 -1.686 2.351 H8C2 PU1 48
PU1 H9C1 1H9C H 0 0 N N N N N N 2.627 7.687 23.550 4.384 -0.328 1.800 H9C1 PU1 49
PU1 H9C2 2H9C H 0 0 N N N N N N 3.285 6.378 24.466 4.050 0.728 3.193 H9C2 PU1 50
PU1 H11 H11 H 0 1 N N N N N N 6.787 8.285 22.824 5.759 -2.631 5.015 H11 PU1 51
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
PU1 CL C13 SING N N 1
PU1 C13 C15 DOUB Y N 2
PU1 C13 C12 SING Y N 3
PU1 C15 O3 SING N N 4
PU1 C15 C17 SING Y N 5
PU1 O3 C20 SING N N 6
PU1 C20 H201 SING N N 7
PU1 C20 H202 SING N N 8
PU1 C20 H203 SING N N 9
PU1 C17 O2 SING N N 10
PU1 C17 C16 DOUB Y N 11
PU1 O2 C19 SING N N 12
PU1 C19 H191 SING N N 13
PU1 C19 H192 SING N N 14
PU1 C19 H193 SING N N 15
PU1 C16 O1 SING N N 16
PU1 C16 C14 SING Y N 17
PU1 O1 C18 SING N N 18
PU1 C18 H181 SING N N 19
PU1 C18 H182 SING N N 20
PU1 C18 H183 SING N N 21
PU1 C14 C12 DOUB Y N 22
PU1 C14 H14 SING N N 23
PU1 C12 C6 SING N N 24
PU1 C6 C5 SING N N 25
PU1 C6 H6C1 SING N N 26
PU1 C6 H6C2 SING N N 27
PU1 C5 N3 DOUB Y N 28
PU1 C5 N4 SING Y N 29
PU1 N3 C2 SING Y N 30
PU1 C2 C3 DOUB Y N 31
PU1 C2 C1 SING Y N 32
PU1 C3 N5 SING N N 33
PU1 C3 N2 SING Y N 34
PU1 N5 H5N1 SING N N 35
PU1 N5 H5N2 SING N N 36
PU1 C1 N1 DOUB Y N 37
PU1 C1 N4 SING Y N 38
PU1 N1 C4 SING Y N 39
PU1 C4 N2 DOUB Y N 40
PU1 C4 F SING N N 41
PU1 N4 C7 SING N N 42
PU1 C7 C8 SING N N 43
PU1 C7 H7C1 SING N N 44
PU1 C7 H7C2 SING N N 45
PU1 C8 C9 SING N N 46
PU1 C8 H8C1 SING N N 47
PU1 C8 H8C2 SING N N 48
PU1 C9 C10 SING N N 49
PU1 C9 H9C1 SING N N 50
PU1 C9 H9C2 SING N N 51
PU1 C10 C11 TRIP N N 52
PU1 C11 H11 SING N N 53
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
PU1 SMILES ACDLabs 10.04 "Clc1c(OC)c(OC)c(OC)cc1Cc3nc2c(nc(F)nc2n3CCCC#C)N"
PU1 SMILES_CANONICAL CACTVS 3.341 "COc1cc(Cc2nc3c(N)nc(F)nc3n2CCCC#C)c(Cl)c(OC)c1OC"
PU1 SMILES CACTVS 3.341 "COc1cc(Cc2nc3c(N)nc(F)nc3n2CCCC#C)c(Cl)c(OC)c1OC"
PU1 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "COc1cc(c(c(c1OC)OC)Cl)Cc2nc3c(nc(nc3n2CCCC#C)F)N"
PU1 SMILES "OpenEye OEToolkits" 1.5.0 "COc1cc(c(c(c1OC)OC)Cl)Cc2nc3c(nc(nc3n2CCCC#C)F)N"
PU1 InChI InChI 1.03 InChI=1S/C20H21ClFN5O3/c1-5-6-7-8-27-13(24-15-18(23)25-20(22)26-19(15)27)10-11-9-12(28-2)16(29-3)17(30-4)14(11)21/h1,9H,6-8,10H2,2-4H3,(H2,23,25,26)
PU1 InChIKey InChI 1.03 KCIOVTSUEXGUFJ-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
PU1 "SYSTEMATIC NAME" ACDLabs 10.04 8-(2-chloro-3,4,5-trimethoxybenzyl)-2-fluoro-9-pent-4-yn-1-yl-9H-purin-6-amine
PU1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 8-[(2-chloro-3,4,5-trimethoxy-phenyl)methyl]-2-fluoro-9-pent-4-ynyl-purin-6-amine
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
PU1 'Create component' 2004-03-02 EBI
PU1 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id PU1
_pdbe_chem_comp_drugbank_details.drugbank_id DB02550
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name 8-(2-Chloro-3,4,5-Trimethoxy-Benzyl)-2-Fluoro-9-Pent-4-Ylnyl-9h-Purin-6-Ylamine
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number ?
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_synonyms.comp_id PU1
_pdbe_chem_comp_synonyms.name 8-(2-Chloro-3,4,5-Trimethoxy-Benzyl)-2-Fluoro-9-Pent-4-Ylnyl-9h-Purin-6-Ylamine
_pdbe_chem_comp_synonyms.provenance DrugBank
_pdbe_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_drugbank_classification.comp_id PU1
_pdbe_chem_comp_drugbank_classification.drugbank_id DB02550
_pdbe_chem_comp_drugbank_classification.parent 6-aminopurines
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class Imidazopyrimidines
_pdbe_chem_comp_drugbank_classification.superclass 'Organoheterocyclic compounds'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as 6-aminopurines. These are purines that carry an amino group at position 6. Purine is a bicyclic aromatic compound made up of a pyrimidine ring fused to an imidazole ring.'
#
_pdbe_chem_comp_drugbank_targets.comp_id PU1
_pdbe_chem_comp_drugbank_targets.drugbank_id DB02550
_pdbe_chem_comp_drugbank_targets.name 'Heat shock protein HSP 90-alpha'
_pdbe_chem_comp_drugbank_targets.organism Humans
_pdbe_chem_comp_drugbank_targets.uniprot_id P07900
_pdbe_chem_comp_drugbank_targets.pharmacologically_active unknown
_pdbe_chem_comp_drugbank_targets.ordinal 1
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
PU1 CL Cl 13.692 0.802 1
PU1 C13 C 12.942 2.102 2
PU1 C15 C 13.692 3.401 3
PU1 O3 O 15.192 3.401 4
PU1 C20 C 15.942 4.700 5
PU1 C17 C 12.942 4.700 6
PU1 O2 O 13.692 5.999 7
PU1 C19 C 12.942 7.298 8
PU1 C16 C 11.442 4.700 9
PU1 O1 O 10.692 5.999 10
PU1 C18 C 9.192 5.999 11
PU1 C14 C 10.692 3.401 12
PU1 C12 C 11.442 2.102 13
PU1 C6 C 10.692 0.802 14
PU1 C5 C 9.192 0.802 15
PU1 N3 N 8.316 2.010 16
PU1 C2 C 6.897 1.552 17
PU1 C3 C 5.598 2.303 18
PU1 N5 N 5.598 3.803 19
PU1 C1 C 6.897 0.052 20
PU1 N1 N 5.598 -0.698 21
PU1 C4 C 4.299 0.052 22
PU1 N2 N 4.299 1.552 23
PU1 N4 N 8.316 -0.405 24
PU1 C7 C 8.783 -1.830 25
PU1 C8 C 7.781 -2.947 26
PU1 C9 C 8.247 -4.373 27
PU1 C10 C 7.245 -5.489 28
PU1 C11 C 6.243 -6.606 29
PU1 F F 3.000 -0.698 30
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
PU1 CL C13 SINGLE NONE 1
PU1 C13 C15 DOUBLE NONE 2
PU1 C13 C12 SINGLE NONE 3
PU1 C15 O3 SINGLE NONE 4
PU1 C15 C17 SINGLE NONE 5
PU1 O3 C20 SINGLE NONE 6
PU1 C17 O2 SINGLE NONE 7
PU1 C17 C16 DOUBLE NONE 8
PU1 O2 C19 SINGLE NONE 9
PU1 C16 O1 SINGLE NONE 10
PU1 C16 C14 SINGLE NONE 11
PU1 O1 C18 SINGLE NONE 12
PU1 C14 C12 DOUBLE NONE 13
PU1 C12 C6 SINGLE NONE 14
PU1 C6 C5 SINGLE NONE 15
PU1 C5 N3 DOUBLE NONE 16
PU1 C5 N4 SINGLE NONE 17
PU1 N3 C2 SINGLE NONE 18
PU1 C2 C3 DOUBLE NONE 19
PU1 C2 C1 SINGLE NONE 20
PU1 C3 N5 SINGLE NONE 21
PU1 C3 N2 SINGLE NONE 22
PU1 C1 N1 DOUBLE NONE 23
PU1 C1 N4 SINGLE NONE 24
PU1 N1 C4 SINGLE NONE 25
PU1 C4 N2 DOUBLE NONE 26
PU1 C4 F SINGLE NONE 27
PU1 N4 C7 SINGLE NONE 28
PU1 C7 C8 SINGLE NONE 29
PU1 C8 C9 SINGLE NONE 30
PU1 C9 C10 SINGLE NONE 31
PU1 C10 C11 TRIPLE NONE 32
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
PU1 MurckoScaffold S1 scaffold 'c1ccc(Cc2nc3cncnc3[nH]2)cc1' InChI=1S/C12H10N4/c1-2-4-9(5-3-1)6-11-15-10-7-13-8-14-12(10)16-11/h1-5,7-8H,6H2,(H,13,14,15,16) ACIMMUMVJWYEMF-UHFFFAOYSA-N
PU1 adenine F1 fragment 'Nc1ncnc2nc[nH]c12' InChI=1S/C5H5N5/c6-4-3-5(9-1-7-3)10-2-8-4/h1-2H,(H3,6,7,8,9,10) GFFGJBXGBJISGV-UHFFFAOYSA-N
PU1 imidazole F2 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
PU1 phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
PU1 purine F4 fragment 'c1ncc2[nH]cnc2n1' InChI=1S/C5H4N4/c1-4-5(8-2-6-1)9-3-7-4/h1-3H,(H,6,7,8,9) KDCGOANMDULRCW-UHFFFAOYSA-N
PU1 pyrimidine F5 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
PU1 C13 S1 1
PU1 C15 S1 1
PU1 C17 S1 1
PU1 C16 S1 1
PU1 C14 S1 1
PU1 C12 S1 1
PU1 C6 S1 1
PU1 C5 S1 1
PU1 N3 S1 1
PU1 C2 S1 1
PU1 C3 S1 1
PU1 C1 S1 1
PU1 N1 S1 1
PU1 C4 S1 1
PU1 N2 S1 1
PU1 N4 S1 1
PU1 N2 F1 1
PU1 C3 F1 1
PU1 C2 F1 1
PU1 C1 F1 1
PU1 N1 F1 1
PU1 C4 F1 1
PU1 N4 F1 1
PU1 C5 F1 1
PU1 N3 F1 1
PU1 N5 F1 1
PU1 C2 F2 1
PU1 C1 F2 1
PU1 N4 F2 1
PU1 C5 F2 1
PU1 N3 F2 1
PU1 C13 F3 1
PU1 C15 F3 1
PU1 C17 F3 1
PU1 C16 F3 1
PU1 C14 F3 1
PU1 C12 F3 1
PU1 N3 F4 1
PU1 C5 F4 1
PU1 N4 F4 1
PU1 C1 F4 1
PU1 C2 F4 1
PU1 C3 F4 1
PU1 N2 F4 1
PU1 C4 F4 1
PU1 N1 F4 1
PU1 C2 F5 1
PU1 C3 F5 1
PU1 N2 F5 1
PU1 C4 F5 1
PU1 N1 F5 1
PU1 C1 F5 1
#
_pdbe_chem_comp_rdkit_properties.comp_id PU1
_pdbe_chem_comp_rdkit_properties.exactmw 433.132
_pdbe_chem_comp_rdkit_properties.amw 433.871
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 12
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 8
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 30
_pdbe_chem_comp_rdkit_properties.NumAtoms 51
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 10
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.350
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 207.302
_pdbe_chem_comp_rdkit_properties.tpsa 97.310
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.925
_pdbe_chem_comp_rdkit_properties.CrippenMR 106.282
_pdbe_chem_comp_rdkit_properties.chi0v 14.973
_pdbe_chem_comp_rdkit_properties.chi1v 7.717
_pdbe_chem_comp_rdkit_properties.chi2v 3.727
_pdbe_chem_comp_rdkit_properties.chi3v 3.727
_pdbe_chem_comp_rdkit_properties.chi4v 2.437
_pdbe_chem_comp_rdkit_properties.chi0n 35.217
_pdbe_chem_comp_rdkit_properties.chi1n 17.733
_pdbe_chem_comp_rdkit_properties.chi2n 3.367
_pdbe_chem_comp_rdkit_properties.chi3n 3.367
_pdbe_chem_comp_rdkit_properties.chi4n 2.218
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.250
_pdbe_chem_comp_rdkit_properties.kappa1 7.166
_pdbe_chem_comp_rdkit_properties.kappa2 9.049
_pdbe_chem_comp_rdkit_properties.kappa3 3.910
_pdbe_chem_comp_rdkit_properties.Phi 2.162
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
PU1 UniChem DrugBank DB02550
PU1 UniChem ChEBI 47628
PU1 UniChem ZINC ZINC000001552694
PU1 UniChem SureChEMBL SCHEMBL2604977
PU1 UniChem BindingDb 15381
PU1 UniChem BRENDA 42033
PU1 UniChem 'Probes And Drugs' PD007874
PU1 UniChem Nikkaji J2.042.565B
PU1 UniChem 'PubChem TPHARMA' 14905552
PU1 UniChem PubChem 448972
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
PU1 CL 0.434 -2.713 0.446 ETKDGv3 1
PU1 C13 1.575 -1.365 0.419 ETKDGv3 2
PU1 C15 2.828 -1.570 -0.027 ETKDGv3 3
PU1 O3 3.154 -2.876 -0.442 ETKDGv3 4
PU1 C20 4.405 -3.315 -0.958 ETKDGv3 5
PU1 C17 3.803 -0.427 -0.067 ETKDGv3 6
PU1 O2 5.109 -0.695 -0.526 ETKDGv3 7
PU1 C19 6.197 0.217 -0.641 ETKDGv3 8
PU1 C16 3.399 0.807 0.334 ETKDGv3 9
PU1 O1 4.286 1.893 0.295 ETKDGv3 10
PU1 C18 3.961 3.223 0.686 ETKDGv3 11
PU1 C14 2.007 1.001 0.814 ETKDGv3 12
PU1 C12 1.142 -0.020 0.874 ETKDGv3 13
PU1 C6 -0.274 0.225 1.338 ETKDGv3 14
PU1 C5 -1.187 0.401 0.158 ETKDGv3 15
PU1 N3 -1.008 1.374 -0.700 ETKDGv3 16
PU1 C2 -2.057 1.239 -1.646 ETKDGv3 17
PU1 C3 -2.418 2.038 -2.648 ETKDGv3 18
PU1 N5 -1.660 3.195 -3.002 ETKDGv3 19
PU1 C1 -2.864 0.134 -1.284 ETKDGv3 20
PU1 N1 -3.986 -0.144 -1.874 ETKDGv3 21
PU1 C4 -4.375 0.683 -2.996 ETKDGv3 22
PU1 N2 -3.636 1.707 -3.355 ETKDGv3 23
PU1 N4 -2.324 -0.456 -0.117 ETKDGv3 24
PU1 C7 -3.067 -1.285 0.832 ETKDGv3 25
PU1 C8 -3.865 -0.404 1.802 ETKDGv3 26
PU1 C9 -4.643 -1.232 2.831 ETKDGv3 27
PU1 C10 -5.749 -1.967 2.202 ETKDGv3 28
PU1 C11 -6.656 -2.571 1.686 ETKDGv3 29
PU1 F -5.515 0.406 -3.673 ETKDGv3 30
PU1 H201 5.202 -3.186 -0.196 ETKDGv3 31
PU1 H202 4.333 -4.394 -1.201 ETKDGv3 32
PU1 H203 4.650 -2.766 -1.892 ETKDGv3 33
PU1 H191 5.950 1.023 -1.363 ETKDGv3 34
PU1 H192 7.081 -0.331 -1.027 ETKDGv3 35
PU1 H193 6.458 0.634 0.354 ETKDGv3 36
PU1 H181 3.139 3.618 0.053 ETKDGv3 37
PU1 H182 3.668 3.246 1.757 ETKDGv3 38
PU1 H183 4.853 3.868 0.550 ETKDGv3 39
PU1 H14 1.679 1.986 1.119 ETKDGv3 40
PU1 H6C1 -0.334 1.137 1.971 ETKDGv3 41
PU1 H6C2 -0.604 -0.613 1.981 ETKDGv3 42
PU1 H5N1 -0.783 3.445 -2.492 ETKDGv3 43
PU1 H5N2 -1.979 3.807 -3.785 ETKDGv3 44
PU1 H7C1 -2.365 -1.935 1.393 ETKDGv3 45
PU1 H7C2 -3.755 -1.951 0.270 ETKDGv3 46
PU1 H8C1 -4.566 0.246 1.232 ETKDGv3 47
PU1 H8C2 -3.160 0.259 2.349 ETKDGv3 48
PU1 H9C1 -5.068 -0.551 3.598 ETKDGv3 49
PU1 H9C2 -3.966 -1.949 3.341 ETKDGv3 50
PU1 H11 -7.451 -3.101 1.232 ETKDGv3 51
#