data_POH
#
_chem_comp.id POH
_chem_comp.name (1Z,4Z,9Z,15Z)-5,10,15,20-tetrakis(1-methylpyridin-1-ium-4-yl)-21,23-dihydroporphyrin
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C44 H38 N8"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms TMPyP4
_chem_comp.pdbx_formal_charge 4
_chem_comp.pdbx_initial_date 2005-07-15
_chem_comp.pdbx_modified_date 2021-03-01
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 678.826
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code POH
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2A5R
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
POH CX3 CX3 C 0 1 Y N N N N N 6.664 4.608 0.188 -3.518 6.091 1.189 CX3 POH 1
POH C2A C2A C 0 1 Y N N N N N 6.994 5.999 -5.673 1.456 3.961 -0.040 C2A POH 2
POH C71 C71 C 0 1 Y N N N N N 5.671 5.868 -1.640 -2.785 4.092 0.089 C71 POH 3
POH C81 C81 C 0 1 Y N N N N N 6.363 7.022 -1.223 -3.637 4.426 -0.972 C81 POH 4
POH C91 C91 C 0 1 Y N N N N N 7.204 6.965 -0.102 -4.386 5.582 -0.890 C91 POH 5
POH CXN CXN C 0 1 N N N N N N 8.243 5.700 1.788 -5.121 7.584 0.209 CXN POH 6
POH C3A C3A C 0 1 Y N N N N N 6.812 5.953 -4.291 0.108 4.219 -0.012 C3A POH 7
POH C4A C4A C 0 1 Y N N N N N 5.431 5.951 -4.032 -0.564 2.986 0.011 C4A POH 8
POH C1A C1A C 0 1 Y N N N N N 5.730 6.026 -6.281 1.626 2.567 -0.034 C1A POH 9
POH CXD CXD C 0 1 Y N N N N N 5.824 4.665 -0.932 -2.734 4.956 1.192 CXD POH 10
POH NXT NXT N 1 1 Y N N N N N 7.355 5.759 0.605 -4.307 6.367 0.167 NXT POH 11
POH NA NA N 0 1 Y N N N N N 4.766 5.996 -5.264 0.381 1.989 -0.004 NA POH 12
POH NB NB N 0 1 Y N N N N N 2.402 5.949 -3.452 -2.065 0.394 0.018 NB POH 13
POH NC NC N 0 1 Y N N N N N 0.585 6.034 -5.728 -0.381 -1.990 0.001 NC POH 14
POH ND ND N 0 1 Y N N N N N 2.958 6.081 -7.553 2.066 -0.394 -0.021 ND POH 15
POH CHB CHB C 0 1 Y N N N N N 4.821 5.913 -2.764 -1.961 2.859 0.047 CHB POH 16
POH C1B C1B C 0 1 Y N N N N N 3.434 5.911 -2.505 -2.613 1.608 0.040 C1B POH 17
POH CX4 CX4 C 0 1 Y N N N N N -3.125 4.827 -1.447 -5.564 -4.384 0.980 CX4 POH 18
POH C2B C2B C 0 1 Y N N N N N 2.852 5.872 -1.231 -4.030 1.458 0.053 C2B POH 19
POH C72 C72 C 0 1 Y N N N N N -1.192 5.941 -2.418 -4.102 -2.777 -0.029 C72 POH 20
POH C82 C82 C 0 1 Y N N N N N -1.408 7.043 -1.567 -4.973 -2.751 -1.126 C82 POH 21
POH C92 C92 C 0 1 Y N N N N N -2.475 7.035 -0.660 -6.097 -3.549 -1.105 C92 POH 22
POH CXO CXO C 0 1 N N N N N N -4.465 5.918 0.358 -7.563 -5.159 -0.096 CXO POH 23
POH C3B C3B C 0 1 Y N N N N N 1.470 5.884 -1.383 -4.284 0.130 0.036 C3B POH 24
POH C4B C4B C 0 1 Y N N N N N 1.181 5.933 -2.756 -3.023 -0.532 0.014 C4B POH 25
POH CXE CXE C 0 1 Y N N N N N -2.054 4.834 -2.356 -4.417 -3.620 1.045 CXE POH 26
POH NXU NXU N 1 1 Y N N N N N -3.336 5.927 -0.599 -6.357 -4.328 -0.072 NXU POH 27
POH CHC CHC C 0 1 Y N N N N N -0.106 5.961 -3.324 -2.879 -1.936 -0.005 CHC POH 28
POH C1C C1C C 0 1 Y N N N N N -0.382 6.008 -4.709 -1.627 -2.568 0.002 C1C POH 29
POH CX5 CX5 C 0 1 Y N N N N N -1.464 4.993 -11.160 3.550 -6.125 -0.985 CX5 POH 30
POH C2C C2C C 0 1 Y N N N N N -1.643 6.037 -5.324 -1.456 -3.962 0.013 C2C POH 31
POH C73 C73 C 0 1 Y N N N N N -0.311 6.153 -9.359 2.787 -4.093 0.029 C73 POH 32
POH C83 C83 C 0 1 Y N N N N N -0.850 7.376 -9.800 3.609 -4.392 1.124 C83 POH 33
POH C93 C93 C 0 1 Y N N N N N -1.696 7.405 -10.920 4.359 -5.549 1.100 C93 POH 34
POH CXP CXP C 0 1 N N N N N N -2.895 6.242 -12.781 5.125 -7.585 0.086 CXP POH 35
POH C3C C3C C 0 1 Y N N N N N -1.456 6.079 -6.708 -0.108 -4.219 0.018 C3C POH 36
POH C4C C4C C 0 1 Y N N N N N -0.075 6.078 -6.965 0.564 -2.986 0.010 C4C POH 37
POH CXF CXF C 0 1 Y N N N N N -0.619 4.963 -10.041 2.767 -4.991 -1.046 CXF POH 38
POH NXV NXV N 1 1 Y N N N N N -2.003 6.213 -11.601 4.310 -6.367 0.066 NXV POH 39
POH CHD CHD C 0 1 Y N N N N N 0.540 6.115 -8.236 1.961 -2.860 0.009 CHD POH 40
POH C1D C1D C 0 1 Y N N N N N 1.926 6.116 -8.501 2.614 -1.609 -0.012 C1D POH 41
POH CX6 CX6 C 0 1 Y N N N N N 8.333 4.944 -9.751 5.528 4.358 -1.185 CX6 POH 42
POH C2D C2D C 0 1 Y N N N N N 2.515 6.154 -9.775 4.030 -1.459 -0.028 C2D POH 43
POH C74 C74 C 0 1 Y N N N N N 6.571 6.102 -8.538 4.100 2.778 -0.089 C74 POH 44
POH C84 C84 C 0 1 Y N N N N N 7.013 7.328 -9.071 5.005 2.781 0.981 C84 POH 45
POH C94 C94 C 0 1 Y N N N N N 8.112 7.360 -9.943 6.127 3.579 0.904 C94 POH 46
POH CXQ CXQ C 0 1 N N N N N N 9.933 6.197 -11.203 7.560 5.161 -0.192 CXQ POH 47
POH C3D C3D C 0 1 Y N N N N N 3.900 6.143 -9.617 4.284 -0.131 -0.047 C3D POH 48
POH C4D C4D C 0 1 Y N N N N N 4.183 6.098 -8.243 3.024 0.532 -0.042 C4D POH 49
POH CXG CXG C 0 1 Y N N N N N 7.233 4.911 -8.880 4.381 3.592 -1.194 CXG POH 50
POH CHA CHA C 0 1 Y N N N N N 5.465 6.074 -7.662 2.879 1.935 -0.053 CHA POH 51
POH NXW NXW N 1 1 Y N N N N N 8.773 6.167 -10.283 6.354 4.331 -0.156 NXW POH 52
POH H51 H51 H 0 1 N N N N N N 6.780 3.681 0.730 -3.490 6.760 2.036 H51 POH 53
POH H11 H11 H 0 1 N N N N N N 7.944 6.012 -6.186 2.244 4.699 -0.067 H11 POH 54
POH H31 H31 H 0 1 N N N N N N 6.246 7.949 -1.765 -3.706 3.789 -1.841 H31 POH 55
POH H41 H41 H 0 1 N N N N N N 7.736 7.848 0.219 -5.045 5.848 -1.703 H41 POH 56
POH H811 H811 H 0 0 N N N N N N 8.693 6.689 1.959 -4.561 8.411 -0.227 H811 POH 57
POH H821 H821 H 0 0 N N N N N N 7.657 5.406 2.672 -6.038 7.427 -0.358 H821 POH 58
POH H831 H831 H 0 0 N N N N N N 9.038 4.961 1.613 -5.370 7.819 1.244 H831 POH 59
POH H21 H21 H 0 1 N N N N N N 7.596 5.924 -3.549 -0.353 5.195 -0.008 H21 POH 60
POH H61 H61 H 0 1 N N N N N N 5.293 3.781 -1.252 -2.091 4.736 2.031 H61 POH 61
POH H71 H71 H 0 1 N N N N N N 3.775 6.005 -5.395 0.199 1.036 0.004 H71 POH 62
POH H73 H73 H 0 1 N N N N N N 1.576 6.023 -5.594 -0.199 -1.037 -0.005 H73 POH 63
POH H52 H52 H 0 1 N N N N N N -3.787 3.975 -1.400 -5.813 -5.040 1.801 H52 POH 64
POH H12 H12 H 0 1 N N N N N N 3.385 5.838 -0.292 -4.761 2.252 0.073 H12 POH 65
POH H32 H32 H 0 1 N N N N N N -0.748 7.897 -1.614 -4.767 -2.115 -1.974 H32 POH 66
POH H42 H42 H 0 1 N N N N N N -2.636 7.881 -0.008 -6.775 -3.536 -1.946 H42 POH 67
POH H812 H812 H 0 0 N N N N N N -4.468 6.857 0.931 -8.395 -4.604 0.339 H812 POH 68
POH H822 H822 H 0 0 N N N N N N -5.412 5.822 -0.193 -7.802 -5.423 -1.126 H822 POH 69
POH H832 H832 H 0 0 N N N N N N -4.354 5.068 1.048 -7.391 -6.067 0.482 H832 POH 70
POH H22 H22 H 0 1 N N N N N N 0.744 5.860 -0.583 -5.257 -0.339 0.039 H22 POH 71
POH H62 H62 H 0 1 N N N N N N -1.893 3.988 -3.007 -3.773 -3.670 1.911 H62 POH 72
POH H53 H53 H 0 1 N N N N N N -1.700 4.078 -11.683 3.538 -6.825 -1.806 H53 POH 73
POH H13 H13 H 0 1 N N N N N N -2.595 6.028 -4.815 -2.245 -4.700 0.016 H13 POH 74
POH H33 H33 H 0 1 N N N N N N -0.613 8.291 -9.277 3.655 -3.726 1.973 H33 POH 75
POH H43 H43 H 0 1 N N N N N N -2.111 8.343 -11.259 4.996 -5.788 1.939 H43 POH 76
POH H813 H813 H 0 0 N N N N N N -3.216 7.276 -12.974 6.101 -7.375 -0.351 H813 POH 77
POH H823 H823 H 0 0 N N N N N N -2.355 5.856 -13.658 5.252 -7.920 1.115 H823 POH 78
POH H833 H833 H 0 0 N N N N N N -3.778 5.614 -12.589 4.628 -8.364 -0.491 H833 POH 79
POH H23 H23 H 0 1 N N N N N N -2.238 6.107 -7.452 0.354 -5.196 0.027 H23 POH 80
POH H63 H63 H 0 1 N N N N N N -0.205 4.025 -9.703 2.147 -4.799 -1.910 H63 POH 81
POH H54 H54 H 0 1 N N N N N N 8.842 4.028 -10.012 5.756 4.985 -2.034 H54 POH 82
POH H14 H14 H 0 1 N N N N N N 1.986 6.186 -10.716 4.761 -2.254 -0.026 H14 POH 83
POH H34 H34 H 0 1 N N N N N N 6.506 8.245 -8.808 4.826 2.168 1.852 H34 POH 84
POH H44 H44 H 0 1 N N N N N N 8.450 8.301 -10.353 6.831 3.588 1.724 H44 POH 85
POH H814 H814 H 0 0 N N N N N N 10.128 7.234 -11.514 7.340 6.140 0.236 H814 POH 86
POH H824 H824 H 0 0 N N N N N N 10.819 5.795 -10.689 8.349 4.681 0.387 H824 POH 87
POH H834 H834 H 0 0 N N N N N N 9.714 5.584 -12.089 7.887 5.282 -1.224 H834 POH 88
POH H24 H24 H 0 1 N N N N N N 4.629 6.165 -10.414 5.257 0.337 -0.064 H24 POH 89
POH H64 H64 H 0 1 N N N N N N 6.895 3.970 -8.472 3.710 3.620 -2.040 H64 POH 90
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
POH CX3 CXD DOUB Y N 1
POH CX3 NXT SING Y N 2
POH C2A C3A DOUB Y N 3
POH C2A C1A SING Y N 4
POH C71 C81 DOUB Y N 5
POH C71 CXD SING Y N 6
POH C71 CHB SING Y N 7
POH C81 C91 SING Y N 8
POH C91 NXT DOUB Y N 9
POH CXN NXT SING N N 10
POH C3A C4A SING Y N 11
POH C4A NA SING Y N 12
POH C4A CHB DOUB Y N 13
POH C1A NA SING Y N 14
POH C1A CHA DOUB Y N 15
POH NB C1B DOUB Y N 16
POH NB C4B SING Y N 17
POH NC C1C SING Y N 18
POH NC C4C SING Y N 19
POH ND C1D SING Y N 20
POH ND C4D DOUB Y N 21
POH CHB C1B SING Y N 22
POH C1B C2B SING Y N 23
POH CX4 CXE DOUB Y N 24
POH CX4 NXU SING Y N 25
POH C2B C3B DOUB Y N 26
POH C72 C82 DOUB Y N 27
POH C72 CXE SING Y N 28
POH C72 CHC SING Y N 29
POH C82 C92 SING Y N 30
POH C92 NXU DOUB Y N 31
POH CXO NXU SING N N 32
POH C3B C4B SING Y N 33
POH C4B CHC DOUB Y N 34
POH CHC C1C SING Y N 35
POH C1C C2C DOUB Y N 36
POH CX5 CXF DOUB Y N 37
POH CX5 NXV SING Y N 38
POH C2C C3C SING Y N 39
POH C73 C83 DOUB Y N 40
POH C73 CXF SING Y N 41
POH C73 CHD SING Y N 42
POH C83 C93 SING Y N 43
POH C93 NXV DOUB Y N 44
POH CXP NXV SING N N 45
POH C3C C4C DOUB Y N 46
POH C4C CHD SING Y N 47
POH CHD C1D DOUB Y N 48
POH C1D C2D SING Y N 49
POH CX6 CXG SING Y N 50
POH CX6 NXW DOUB Y N 51
POH C2D C3D DOUB Y N 52
POH C74 C84 SING Y N 53
POH C74 CXG DOUB Y N 54
POH C74 CHA SING Y N 55
POH C84 C94 DOUB Y N 56
POH C94 NXW SING Y N 57
POH CXQ NXW SING N N 58
POH C3D C4D SING Y N 59
POH C4D CHA SING Y N 60
POH CX3 H51 SING N N 61
POH C2A H11 SING N N 62
POH C81 H31 SING N N 63
POH C91 H41 SING N N 64
POH CXN H811 SING N N 65
POH CXN H821 SING N N 66
POH CXN H831 SING N N 67
POH C3A H21 SING N N 68
POH CXD H61 SING N N 69
POH NA H71 SING N N 70
POH NC H73 SING N N 71
POH CX4 H52 SING N N 72
POH C2B H12 SING N N 73
POH C82 H32 SING N N 74
POH C92 H42 SING N N 75
POH CXO H812 SING N N 76
POH CXO H822 SING N N 77
POH CXO H832 SING N N 78
POH C3B H22 SING N N 79
POH CXE H62 SING N N 80
POH CX5 H53 SING N N 81
POH C2C H13 SING N N 82
POH C83 H33 SING N N 83
POH C93 H43 SING N N 84
POH CXP H813 SING N N 85
POH CXP H823 SING N N 86
POH CXP H833 SING N N 87
POH C3C H23 SING N N 88
POH CXF H63 SING N N 89
POH CX6 H54 SING N N 90
POH C2D H14 SING N N 91
POH C84 H34 SING N N 92
POH C94 H44 SING N N 93
POH CXQ H814 SING N N 94
POH CXQ H824 SING N N 95
POH CXQ H834 SING N N 96
POH C3D H24 SING N N 97
POH CXG H64 SING N N 98
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
POH SMILES ACDLabs 12.01 n5c6c(c1nc(cc1)c(c2cc[n+](cc2)C)c3nc(C=C3)c(c4cc[n+](cc4)C)c8ccc(c(c5C=C6)c7cc[n+](cc7)C)n8)c9cc[n+](cc9)C
POH InChI InChI 1.03 InChI=1S/C44H37N8/c1-49-21-13-29(14-22-49)41-33-5-7-35(45-33)42(30-15-23-50(2)24-16-30)37-9-11-39(47-37)44(32-19-27-52(4)28-20-32)40-12-10-38(48-40)43(36-8-6-34(41)46-36)31-17-25-51(3)26-18-31/h5-28H,1-4H3,(H,45,46,47,48)/q+3/p+1/b41-33-,41-34-,42-35-,42-37-,43-36-,43-38-,44-39-,44-40-
POH InChIKey InChI 1.03 ABCGFHPGHXSVKI-LWQDQPMZSA-O
POH SMILES_CANONICAL CACTVS 3.370 C[n+]1ccc(cc1)c2c3[nH]c(cc3)c(c4cc[n+](C)cc4)c5ccc(n5)c(c6[nH]c(cc6)c(c7cc[n+](C)cc7)c8ccc2n8)c9cc[n+](C)cc9
POH SMILES CACTVS 3.370 C[n+]1ccc(cc1)c2c3[nH]c(cc3)c(c4cc[n+](C)cc4)c5ccc(n5)c(c6[nH]c(cc6)c(c7cc[n+](C)cc7)c8ccc2n8)c9cc[n+](C)cc9
POH SMILES_CANONICAL "OpenEye OEToolkits" 1.7.2 C[n+]1ccc(cc1)/c/2c\3/nc(/c(c/4\[nH]/c(c(\c5n/c(c(\c6[nH]c2cc6)/c7cc[n+](cc7)C)/C=C5)/c8cc[n+](cc8)C)/cc4)/c9cc[n+](cc9)C)C=C3
POH SMILES "OpenEye OEToolkits" 1.7.2 C[n+]1ccc(cc1)c2c3ccc([nH]3)c(c4nc(c(c5ccc([nH]5)c(c6nc2C=C6)c7cc[n+](cc7)C)c8cc[n+](cc8)C)C=C4)c9cc[n+](cc9)C
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
POH "SYSTEMATIC NAME" ACDLabs 12.01 "4,4',4'',4'''-porphyrin-5,10,15,20-tetrayltetrakis(1-methylpyridinium)"
POH "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.2 (5Z,10Z,14Z,19Z)-5,10,15,20-tetrakis(1-methylpyridin-1-ium-4-yl)-21,23-dihydroporphyrin
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
POH 'Create component' 2005-07-15 RCSB
POH 'Other modification' 2011-02-14 RCSB
POH 'Modify aromatic_flag' 2011-06-04 RCSB
POH 'Modify descriptor' 2011-06-04 RCSB
POH 'Modify name' 2011-06-07 RCSB
POH 'Modify descriptor' 2011-06-07 RCSB
POH 'Modify identifier' 2011-06-07 RCSB
POH 'Modify synonyms' 2021-03-01 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id POH
_pdbx_chem_comp_synonyms.name TMPyP4
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id POH
_pdbe_chem_comp_synonyms.name TMPyP4
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
POH CX3 C 4.327 6.513 1
POH C2A C 8.259 4.433 2
POH C71 C 4.176 3.924 3
POH C81 C 2.681 4.004 4
POH C91 C 2.007 5.344 5
POH CXN C 2.155 7.938 6
POH C3A C 6.757 4.433 7
POH C4A C 6.305 2.981 8
POH C1A C 8.761 3.031 9
POH CXD C 5.002 5.173 10
POH NXT N 2.830 6.598 11
POH NA N 7.508 2.029 12
POH NB N 5.303 -0.025 13
POH NC N 7.558 -2.079 14
POH ND N 9.811 -0.025 15
POH CHB C 4.853 2.579 16
POH C1B C 4.452 1.128 17
POH CX4 C 0.995 -3.269 18
POH C2B C 3.000 0.726 19
POH C72 C 3.617 -3.296 20
POH C82 C 3.570 -4.809 21
POH C92 C 2.260 -5.539 22
POH CXO C -0.338 -5.499 23
POH C3B C 3.000 -0.776 24
POH C4B C 4.452 -1.178 25
POH CXE C 2.306 -2.539 26
POH NXU N 0.972 -4.769 27
POH CHC C 4.904 -2.579 28
POH C1C C 6.355 -3.031 29
POH CX5 C 10.755 -6.517 30
POH C2C C 6.807 -4.433 31
POH C73 C 10.950 -3.974 32
POH C83 C 12.422 -4.023 33
POH C93 C 13.085 -5.369 34
POH CXP C 12.915 -7.961 35
POH C3C C 8.309 -4.433 36
POH C4C C 8.761 -2.981 37
POH CXF C 10.092 -5.172 38
POH NXV N 12.252 -6.616 39
POH CHD C 10.263 -2.579 40
POH C1D C 10.712 -1.128 41
POH CX6 C 14.122 3.263 42
POH C2D C 12.116 -0.726 43
POH C74 C 11.499 3.293 44
POH C84 C 11.549 4.807 45
POH C94 C 12.861 5.535 46
POH CXQ C 15.458 5.491 47
POH C3D C 12.116 0.776 48
POH C4D C 10.662 1.178 49
POH CXG C 12.810 2.535 50
POH CHA C 10.213 2.579 51
POH NXW N 14.147 4.763 52
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
POH CX3 CXD DOUBLE NONE 1
POH CX3 NXT SINGLE NONE 2
POH C2A C3A DOUBLE NONE 3
POH C2A C1A SINGLE ENDUPRIGHT 4
POH C71 C81 DOUBLE NONE 5
POH C71 CXD SINGLE NONE 6
POH C71 CHB SINGLE ENDUPRIGHT 7
POH C81 C91 SINGLE NONE 8
POH C91 NXT DOUBLE NONE 9
POH CXN NXT SINGLE NONE 10
POH C3A C4A SINGLE ENDUPRIGHT 11
POH C4A NA SINGLE ENDUPRIGHT 12
POH C4A CHB DOUBLE NONE 13
POH C1A NA SINGLE ENDUPRIGHT 14
POH C1A CHA DOUBLE NONE 15
POH NB C1B DOUBLE NONE 16
POH NB C4B SINGLE ENDUPRIGHT 17
POH NC C1C SINGLE NONE 18
POH NC C4C SINGLE NONE 19
POH ND C1D SINGLE ENDDOWNRIGHT 20
POH ND C4D DOUBLE NONE 21
POH CHB C1B SINGLE ENDUPRIGHT 22
POH C1B C2B SINGLE NONE 23
POH CX4 CXE DOUBLE NONE 24
POH CX4 NXU SINGLE NONE 25
POH C2B C3B DOUBLE NONE 26
POH C72 C82 DOUBLE NONE 27
POH C72 CXE SINGLE NONE 28
POH C72 CHC SINGLE ENDDOWNRIGHT 29
POH C82 C92 SINGLE NONE 30
POH C92 NXU DOUBLE NONE 31
POH CXO NXU SINGLE NONE 32
POH C3B C4B SINGLE ENDDOWNRIGHT 33
POH C4B CHC DOUBLE NONE 34
POH CHC C1C SINGLE ENDDOWNRIGHT 35
POH C1C C2C DOUBLE NONE 36
POH CX5 CXF DOUBLE NONE 37
POH CX5 NXV SINGLE NONE 38
POH C2C C3C SINGLE NONE 39
POH C73 C83 DOUBLE NONE 40
POH C73 CXF SINGLE NONE 41
POH C73 CHD SINGLE ENDUPRIGHT 42
POH C83 C93 SINGLE NONE 43
POH C93 NXV DOUBLE NONE 44
POH CXP NXV SINGLE NONE 45
POH C3C C4C DOUBLE NONE 46
POH C4C CHD SINGLE ENDDOWNRIGHT 47
POH CHD C1D DOUBLE NONE 48
POH C1D C2D SINGLE ENDDOWNRIGHT 49
POH CX6 CXG DOUBLE NONE 50
POH CX6 NXW SINGLE NONE 51
POH C2D C3D DOUBLE NONE 52
POH C74 C84 DOUBLE NONE 53
POH C74 CXG SINGLE NONE 54
POH C74 CHA SINGLE ENDUPRIGHT 55
POH C84 C94 SINGLE NONE 56
POH C94 NXW DOUBLE NONE 57
POH CXQ NXW SINGLE NONE 58
POH C3D C4D SINGLE NONE 59
POH C4D CHA SINGLE ENDDOWNRIGHT 60
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
POH MurckoScaffold S1 scaffold 'C1=Cc2nc1c(-c1cc[nH+]cc1)c1ccc([nH]1)c(-c1cc[nH+]cc1)c1nc(c(-c3cc[nH+]cc3)c3ccc([nH]3)c2-c2cc[nH+]cc2)C=C1' InChI=1S/C40H26N8/c1-2-30-38(26-11-19-42-20-12-26)32-5-6-34(47-32)40(28-15-23-44-24-16-28)36-8-7-35(48-36)39(27-13-21-43-22-14-27)33-4-3-31(46-33)37(29(1)45-30)25-9-17-41-18-10-25/h1-24,45,48H/p+4/b37-29-,37-31-,38-30-,38-32-,39-33-,39-35-,40-34-,40-36- DNZSHSJERXNJGX-XXDGMDECSA-R
POH porphin-like F1 fragment C1~C~C2~C~C3~C~C~C(~C~C4~C~C~C(~C~C5~C~C~C(~C~C~1~N~2)~N~5)~N~4)~N~3 ? ?
POH pyridine F2 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
POH pyrrole F3 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
POH CX3 S1 1
POH C2A S1 1
POH C71 S1 1
POH C81 S1 1
POH C91 S1 1
POH C3A S1 1
POH C4A S1 1
POH C1A S1 1
POH CXD S1 1
POH NXT S1 1
POH NA S1 1
POH NB S1 1
POH NC S1 1
POH ND S1 1
POH CHB S1 1
POH C1B S1 1
POH CX4 S1 1
POH C2B S1 1
POH C72 S1 1
POH C82 S1 1
POH C92 S1 1
POH C3B S1 1
POH C4B S1 1
POH CXE S1 1
POH NXU S1 1
POH CHC S1 1
POH C1C S1 1
POH CX5 S1 1
POH C2C S1 1
POH C73 S1 1
POH C83 S1 1
POH C93 S1 1
POH C3C S1 1
POH C4C S1 1
POH CXF S1 1
POH NXV S1 1
POH CHD S1 1
POH C1D S1 1
POH CX6 S1 1
POH C2D S1 1
POH C74 S1 1
POH C84 S1 1
POH C94 S1 1
POH C3D S1 1
POH C4D S1 1
POH CXG S1 1
POH CHA S1 1
POH NXW S1 1
POH C2A F1 1
POH C3A F1 1
POH C4A F1 1
POH CHB F1 1
POH C1B F1 1
POH NB F1 1
POH C4B F1 1
POH C3B F1 1
POH C2B F1 1
POH CHC F1 1
POH C1C F1 1
POH NC F1 1
POH C4C F1 1
POH CHD F1 1
POH C1D F1 1
POH ND F1 1
POH C4D F1 1
POH CHA F1 1
POH C1A F1 1
POH NA F1 1
POH C3D F1 1
POH C2D F1 1
POH C3C F1 1
POH C2C F1 1
POH CX3 F2 1
POH CXD F2 1
POH C71 F2 1
POH C81 F2 1
POH C91 F2 1
POH NXT F2 1
POH CX4 F2 2
POH CXE F2 2
POH C72 F2 2
POH C82 F2 2
POH C92 F2 2
POH NXU F2 2
POH CX5 F2 3
POH CXF F2 3
POH C73 F2 3
POH C83 F2 3
POH C93 F2 3
POH NXV F2 3
POH CX6 F2 4
POH CXG F2 4
POH C74 F2 4
POH C84 F2 4
POH C94 F2 4
POH NXW F2 4
POH C4A F3 1
POH C3A F3 1
POH C2A F3 1
POH C1A F3 1
POH NA F3 1
POH C1C F3 2
POH C2C F3 2
POH C3C F3 2
POH C4C F3 2
POH NC F3 2
#
_pdbe_chem_comp_rdkit_properties.comp_id POH
_pdbe_chem_comp_rdkit_properties.exactmw 678.320
_pdbe_chem_comp_rdkit_properties.amw 678.844
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 2
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 52
_pdbe_chem_comp_rdkit_properties.NumAtoms 90
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 8
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.091
_pdbe_chem_comp_rdkit_properties.NumRings 9
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 7
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 9
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 7
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 8
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 354.717
_pdbe_chem_comp_rdkit_properties.tpsa 72.880
_pdbe_chem_comp_rdkit_properties.CrippenClogP 4.026
_pdbe_chem_comp_rdkit_properties.CrippenMR 194.541
_pdbe_chem_comp_rdkit_properties.chi0v 25.578
_pdbe_chem_comp_rdkit_properties.chi1v 14.472
_pdbe_chem_comp_rdkit_properties.chi2v 7.328
_pdbe_chem_comp_rdkit_properties.chi3v 7.328
_pdbe_chem_comp_rdkit_properties.chi4v 5.119
_pdbe_chem_comp_rdkit_properties.chi0n 63.578
_pdbe_chem_comp_rdkit_properties.chi1n 33.367
_pdbe_chem_comp_rdkit_properties.chi2n 7.328
_pdbe_chem_comp_rdkit_properties.chi3n 7.328
_pdbe_chem_comp_rdkit_properties.chi4n 5.119
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -6.800
_pdbe_chem_comp_rdkit_properties.kappa1 10.617
_pdbe_chem_comp_rdkit_properties.kappa2 12.511
_pdbe_chem_comp_rdkit_properties.kappa3 5.601
_pdbe_chem_comp_rdkit_properties.Phi 2.554
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
POH UniChem ChEBI 37447
POH UniChem SureChEMBL SCHEMBL265519
POH UniChem 'PubChem TPHARMA' 14888385
POH UniChem ACTor 38673-65-3
POH UniChem BindingDb 50107609
POH UniChem CCDC OBOZAI
POH UniChem Nikkaji J253.077E
POH UniChem Nikkaji J2.096.016G
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
POH CX3 6.292 3.096 0.980 ETKDGv3 1
POH C2A 0.230 4.287 0.367 ETKDGv3 2
POH C71 4.144 2.731 -0.111 ETKDGv3 3
POH C81 4.425 3.684 -1.013 ETKDGv3 4
POH C91 5.707 4.412 -0.930 ETKDGv3 5
POH CXN 7.849 4.844 0.066 ETKDGv3 6
POH C3A 1.524 4.015 0.315 ETKDGv3 7
POH C4A 1.693 2.599 -0.032 ETKDGv3 8
POH C1A -0.520 3.065 0.056 ETKDGv3 9
POH CXD 5.141 2.416 0.935 ETKDGv3 10
POH NXT 6.566 4.140 0.019 ETKDGv3 11
POH NA 0.404 2.004 -0.194 ETKDGv3 12
POH NB 2.079 -0.353 0.009 ETKDGv3 13
POH NC -0.410 -1.885 -0.043 ETKDGv3 14
POH ND -2.061 0.518 0.166 ETKDGv3 15
POH CHB 2.878 1.963 -0.182 ETKDGv3 16
POH C1B 2.986 0.493 -0.364 ETKDGv3 17
POH CX4 4.545 -5.558 0.473 ETKDGv3 18
POH C2B 4.180 -0.193 -0.873 ETKDGv3 19
POH C72 2.682 -4.106 -0.133 ETKDGv3 20
POH C82 2.163 -5.074 -0.903 ETKDGv3 21
POH C92 2.863 -6.368 -1.022 ETKDGv3 22
POH CXO 4.673 -7.864 -0.517 ETKDGv3 23
POH C3B 3.962 -1.493 -0.802 ETKDGv3 24
POH C4B 2.620 -1.647 -0.247 ETKDGv3 25
POH CXE 3.941 -4.371 0.599 ETKDGv3 26
POH NXU 3.971 -6.589 -0.361 ETKDGv3 27
POH CHC 1.984 -2.805 0.017 ETKDGv3 28
POH C1C 0.565 -2.801 0.442 ETKDGv3 29
POH CX5 -6.378 -3.262 0.839 ETKDGv3 30
POH C2C -0.003 -3.709 1.228 ETKDGv3 31
POH C73 -4.131 -2.672 0.099 ETKDGv3 32
POH C83 -4.096 -3.754 -0.693 ETKDGv3 33
POH C93 -5.263 -4.655 -0.753 ETKDGv3 34
POH CXP -7.486 -5.305 -0.116 ETKDGv3 35
POH C3C -1.431 -3.409 1.278 ETKDGv3 36
POH C4C -1.636 -2.338 0.519 ETKDGv3 37
POH CXF -5.341 -2.420 0.914 ETKDGv3 38
POH NXV -6.322 -4.423 -0.019 ETKDGv3 39
POH CHD -2.961 -1.764 0.189 ETKDGv3 40
POH C1D -3.093 -0.444 -0.042 ETKDGv3 41
POH CX6 -3.367 6.364 -0.696 ETKDGv3 42
POH C2D -4.291 0.248 -0.508 ETKDGv3 43
POH C74 -2.702 4.180 0.156 ETKDGv3 44
POH C84 -3.579 4.292 1.165 ETKDGv3 45
POH C94 -4.409 5.507 1.279 ETKDGv3 46
POH CXQ -5.143 7.664 0.517 ETKDGv3 47
POH C3D -3.971 1.527 -0.576 ETKDGv3 48
POH C4D -2.572 1.664 -0.153 ETKDGv3 49
POH CXG -2.601 5.276 -0.833 ETKDGv3 50
POH CHA -1.868 2.963 0.009 ETKDGv3 51
POH NXW -4.288 6.480 0.412 ETKDGv3 52
POH H51 7.018 2.855 1.746 ETKDGv3 53
POH H11 -0.179 5.255 0.624 ETKDGv3 54
POH H31 3.728 3.922 -1.807 ETKDGv3 55
POH H41 5.921 5.173 -1.672 ETKDGv3 56
POH H811 8.552 4.386 -0.661 ETKDGv3 57
POH H821 8.294 4.785 1.083 ETKDGv3 58
POH H831 7.715 5.920 -0.180 ETKDGv3 59
POH H21 2.307 4.732 0.524 ETKDGv3 60
POH H61 4.943 1.638 1.661 ETKDGv3 61
POH H71 0.199 1.134 -0.730 ETKDGv3 62
POH H73 -0.301 -1.234 -0.851 ETKDGv3 63
POH H52 5.469 -5.740 1.008 ETKDGv3 64
POH H12 5.084 0.268 -1.249 ETKDGv3 65
POH H32 1.240 -4.917 -1.448 ETKDGv3 66
POH H42 2.441 -7.129 -1.668 ETKDGv3 67
POH H812 5.261 -7.852 -1.459 ETKDGv3 68
POH H822 5.363 -8.042 0.336 ETKDGv3 69
POH H832 3.950 -8.708 -0.547 ETKDGv3 70
POH H22 4.649 -2.266 -1.119 ETKDGv3 71
POH H62 4.373 -3.611 1.239 ETKDGv3 72
POH H53 -7.261 -3.066 1.435 ETKDGv3 73
POH H13 0.495 -4.545 1.703 ETKDGv3 74
POH H33 -3.224 -3.973 -1.298 ETKDGv3 75
POH H43 -5.225 -5.511 -1.417 ETKDGv3 76
POH H813 -8.134 -5.205 0.782 ETKDGv3 77
POH H823 -7.167 -6.368 -0.184 ETKDGv3 78
POH H833 -8.078 -5.042 -1.017 ETKDGv3 79
POH H23 -2.190 -3.981 1.796 ETKDGv3 80
POH H63 -5.390 -1.562 1.572 ETKDGv3 81
POH H54 -3.291 7.160 -1.428 ETKDGv3 82
POH H14 -5.250 -0.176 -0.772 ETKDGv3 83
POH H34 -3.685 3.503 1.900 ETKDGv3 84
POH H44 -5.119 5.576 2.095 ETKDGv3 85
POH H814 -6.141 7.442 0.084 ETKDGv3 86
POH H824 -4.697 8.523 -0.029 ETKDGv3 87
POH H834 -5.264 7.967 1.580 ETKDGv3 88
POH H24 -4.635 2.320 -0.896 ETKDGv3 89
POH H64 -1.917 5.198 -1.668 ETKDGv3 90
#