data_PH3
#
_chem_comp.id PH3
_chem_comp.name "N-(CHLOROPHENYL)-N'-HYDROXYGUANIDINE"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C7 H8 Cl N3 O"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-12-16
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 185.611
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code PH3
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1DM6
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
PH3 CL CL CL 0 0 N N N N N N 2.300 3.573 65.197 -0.559 0.071 -3.921 CL PH3 1
PH3 C1 C1 C 0 1 Y N N N N N 0.183 7.701 65.524 0.826 -0.172 0.355 C1 PH3 2
PH3 C2 C2 C 0 1 Y N N N N N 1.608 7.499 66.162 1.613 0.464 -0.595 C2 PH3 3
PH3 C3 C3 C 0 1 Y N N N N N 2.296 6.139 66.044 1.185 0.537 -1.906 C3 PH3 4
PH3 C4 C4 C 0 1 Y N N N N N 1.564 5.136 65.353 -0.025 -0.022 -2.272 C4 PH3 5
PH3 C5 C5 C 0 1 Y N N N N N 0.253 5.339 64.769 -0.810 -0.658 -1.327 C5 PH3 6
PH3 C6 C6 C 0 1 Y N N N N N -0.409 6.603 64.870 -0.385 -0.739 -0.015 C6 PH3 7
PH3 NE NE N 0 1 N N N N N N -0.457 8.996 65.647 1.257 -0.248 1.685 NE PH3 8
PH3 CZ CZ C 0 1 N N N N N N -0.205 9.949 66.579 0.359 -0.063 2.711 CZ PH3 9
PH3 NH1 NH1 N 0 1 N N N N N N 0.610 9.773 67.666 -0.933 0.312 2.433 NH1 PH3 10
PH3 NH2 NH2 N 0 1 N N N N N N -0.779 11.117 66.407 0.734 -0.244 3.946 NH2 PH3 11
PH3 OH OH O 0 1 N N N N N N 0.812 10.640 68.648 -1.857 0.503 3.489 OH PH3 12
PH3 H2 H2 H 0 1 N N N N N N 2.126 8.314 66.694 2.558 0.902 -0.309 H2 PH3 13
PH3 H3 H3 H 0 1 N N N N N N 3.292 5.888 66.446 1.797 1.033 -2.646 H3 PH3 14
PH3 H5 H5 H 0 1 N N N N N N -0.251 4.514 64.236 -1.755 -1.094 -1.615 H5 PH3 15
PH3 H6 H6 H 0 1 N N N N N N -1.410 6.735 64.428 -0.998 -1.235 0.721 H6 PH3 16
PH3 HNE HNE H 0 1 N N N N N N -1.458 8.811 65.697 2.189 -0.431 1.883 HNE PH3 17
PH3 HN1 HN1 H 0 1 N N N N N N 1.531 9.540 67.296 -1.212 0.447 1.514 HN1 PH3 18
PH3 HN2 HN2 H 0 1 N N N N N N -0.216 11.957 66.540 1.621 -0.587 4.138 HN2 PH3 19
PH3 HO HO H 0 1 N N N N N N 1.377 10.518 69.401 -2.696 0.761 3.083 HO PH3 20
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
PH3 CL C4 SING N N 1
PH3 C1 C2 DOUB Y N 2
PH3 C1 C6 SING Y N 3
PH3 C1 NE SING N N 4
PH3 C2 C3 SING Y N 5
PH3 C2 H2 SING N N 6
PH3 C3 C4 DOUB Y N 7
PH3 C3 H3 SING N N 8
PH3 C4 C5 SING Y N 9
PH3 C5 C6 DOUB Y N 10
PH3 C5 H5 SING N N 11
PH3 C6 H6 SING N N 12
PH3 NE CZ SING N N 13
PH3 NE HNE SING N N 14
PH3 CZ NH1 SING N N 15
PH3 CZ NH2 DOUB N N 16
PH3 NH1 OH SING N N 17
PH3 NH1 HN1 SING N N 18
PH3 NH2 HN2 SING N N 19
PH3 OH HO SING N N 20
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
PH3 SMILES ACDLabs 10.04 Clc1ccc(NC(=[N@H])NO)cc1
PH3 SMILES_CANONICAL CACTVS 3.341 ONC(=N)Nc1ccc(Cl)cc1
PH3 SMILES CACTVS 3.341 ONC(=N)Nc1ccc(Cl)cc1
PH3 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 c1cc(ccc1NC(=N)NO)Cl
PH3 SMILES "OpenEye OEToolkits" 1.5.0 c1cc(ccc1NC(=N)NO)Cl
PH3 InChI InChI 1.03 InChI=1S/C7H8ClN3O/c8-5-1-3-6(4-2-5)10-7(9)11-12/h1-4,12H,(H3,9,10,11)
PH3 InChIKey InChI 1.03 JYBXKTLYOMPMQY-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
PH3 "SYSTEMATIC NAME" ACDLabs 10.04 1-(4-chlorophenyl)-3-hydroxyguanidine
PH3 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 1-(4-chlorophenyl)-3-hydroxy-guanidine
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
PH3 'Create component' 1999-12-16 RCSB
PH3 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id PH3
_pdbe_chem_comp_drugbank_details.drugbank_id DB04559
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name "N-(Chlorophenyl)-N'-hydroxyguanidine"
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number 130974-86-6
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_synonyms.comp_id PH3
_pdbe_chem_comp_synonyms.name "N-(Chlorophenyl)-N'-hydroxyguanidine"
_pdbe_chem_comp_synonyms.provenance DrugBank
_pdbe_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_drugbank_classification.comp_id PH3
_pdbe_chem_comp_drugbank_classification.drugbank_id DB04559
_pdbe_chem_comp_drugbank_classification.parent Chlorobenzenes
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Benzene and substituted derivatives'
_pdbe_chem_comp_drugbank_classification.superclass Benzenoids
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as chlorobenzenes. These are compounds containing one or more chlorine atoms attached to a benzene moiety.'
#
_pdbe_chem_comp_drugbank_targets.comp_id PH3
_pdbe_chem_comp_drugbank_targets.drugbank_id DB04559
_pdbe_chem_comp_drugbank_targets.name 'Nitric oxide synthase 3'
_pdbe_chem_comp_drugbank_targets.organism Humans
_pdbe_chem_comp_drugbank_targets.uniprot_id P29474
_pdbe_chem_comp_drugbank_targets.pharmacologically_active yes
_pdbe_chem_comp_drugbank_targets.ordinal 1
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
PH3 CL Cl 4.299 -4.965 1
PH3 C1 C 4.299 -0.465 2
PH3 C2 C 3.000 -1.215 3
PH3 C3 C 3.000 -2.715 4
PH3 C4 C 4.299 -3.465 5
PH3 C5 C 5.598 -2.715 6
PH3 C6 C 5.598 -1.215 7
PH3 NE N 4.299 1.035 8
PH3 CZ C 5.598 1.785 9
PH3 NH1 N 5.598 3.285 10
PH3 NH2 N 6.897 1.035 11
PH3 OH O 6.897 4.035 12
PH3 HN2 H 6.897 -0.465 13
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
PH3 CL C4 SINGLE NONE 1
PH3 C1 C2 DOUBLE NONE 2
PH3 C1 C6 SINGLE NONE 3
PH3 C1 NE SINGLE NONE 4
PH3 C2 C3 SINGLE NONE 5
PH3 C3 C4 DOUBLE NONE 6
PH3 C4 C5 SINGLE NONE 7
PH3 C5 C6 DOUBLE NONE 8
PH3 NE CZ SINGLE ENDUPRIGHT 9
PH3 CZ NH1 SINGLE ENDUPRIGHT 10
PH3 CZ NH2 DOUBLE NONE 11
PH3 NH1 OH SINGLE NONE 12
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
PH3 MurckoScaffold S1 scaffold c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
PH3 phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
PH3 C1 S1 1
PH3 C2 S1 1
PH3 C3 S1 1
PH3 C4 S1 1
PH3 C5 S1 1
PH3 C6 S1 1
PH3 C1 F1 1
PH3 C2 F1 1
PH3 C3 F1 1
PH3 C4 F1 1
PH3 C5 F1 1
PH3 C6 F1 1
#
_pdbe_chem_comp_rdkit_properties.comp_id PH3
_pdbe_chem_comp_rdkit_properties.exactmw 185.036
_pdbe_chem_comp_rdkit_properties.amw 185.614
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 4
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 4
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 2
_pdbe_chem_comp_rdkit_properties.NumHBD 4
_pdbe_chem_comp_rdkit_properties.NumHBA 2
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 12
_pdbe_chem_comp_rdkit_properties.NumAtoms 20
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 5
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0
_pdbe_chem_comp_rdkit_properties.NumRings 1
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 86.134
_pdbe_chem_comp_rdkit_properties.tpsa 68.140
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.285
_pdbe_chem_comp_rdkit_properties.CrippenMR 46.900
_pdbe_chem_comp_rdkit_properties.chi0v 6.384
_pdbe_chem_comp_rdkit_properties.chi1v 3.144
_pdbe_chem_comp_rdkit_properties.chi2v 1.064
_pdbe_chem_comp_rdkit_properties.chi3v 1.064
_pdbe_chem_comp_rdkit_properties.chi4v 0.561
_pdbe_chem_comp_rdkit_properties.chi0n 13.628
_pdbe_chem_comp_rdkit_properties.chi1n 6.516
_pdbe_chem_comp_rdkit_properties.chi2n 0.875
_pdbe_chem_comp_rdkit_properties.chi3n 0.875
_pdbe_chem_comp_rdkit_properties.chi4n 0.467
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.260
_pdbe_chem_comp_rdkit_properties.kappa1 2.901
_pdbe_chem_comp_rdkit_properties.kappa2 3.941
_pdbe_chem_comp_rdkit_properties.kappa3 2.410
_pdbe_chem_comp_rdkit_properties.Phi 0.953
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
PH3 UniChem DrugBank DB04559
PH3 UniChem ACTor 130974-86-6
PH3 UniChem BRENDA 125773
PH3 UniChem BRENDA 57084
PH3 UniChem 'Probes And Drugs' PD006004
PH3 UniChem 'EPA CompTox Dashboard' DTXSID90156823
PH3 UniChem SureChEMBL SCHEMBL2213727
PH3 UniChem PubChem 181426
PH3 UniChem Nikkaji J1.060.514H
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
PH3 CL 4.988 0.221 0.548 ETKDGv3 1
PH3 C1 0.508 -0.025 -0.396 ETKDGv3 2
PH3 C2 1.004 -0.614 0.710 ETKDGv3 3
PH3 C3 2.447 -0.528 1.018 ETKDGv3 4
PH3 C4 3.274 0.119 0.188 ETKDGv3 5
PH3 C5 2.743 0.744 -1.042 ETKDGv3 6
PH3 C6 1.435 0.671 -1.320 ETKDGv3 7
PH3 NE -0.885 -0.119 -0.742 ETKDGv3 8
PH3 CZ -1.966 -0.094 0.205 ETKDGv3 9
PH3 NH1 -3.287 -0.440 -0.233 ETKDGv3 10
PH3 NH2 -1.758 0.292 1.426 ETKDGv3 11
PH3 OH -4.344 -0.414 0.615 ETKDGv3 12
PH3 H2 0.366 -1.182 1.373 ETKDGv3 13
PH3 H3 2.828 -0.996 1.917 ETKDGv3 14
PH3 H5 3.412 1.258 -1.720 ETKDGv3 15
PH3 H6 1.053 1.130 -2.224 ETKDGv3 16
PH3 HNE -1.132 -0.117 -1.757 ETKDGv3 17
PH3 HN1 -3.440 -0.747 -1.220 ETKDGv3 18
PH3 HN2 -2.521 0.345 2.137 ETKDGv3 19
PH3 HO -4.725 0.496 0.517 ETKDGv3 20
#