data_PFN
#
_chem_comp.id PFN
_chem_comp.name FENOPROFEN
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C15 H14 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms "(2R)-2-(3-PHENOXYPHENYL)PROPANOIC ACID"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2010-02-26
_chem_comp.pdbx_modified_date 2020-06-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 242.270
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code PFN
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2X7H
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
PFN CAL CAL C 0 1 Y N N N N N -8.326 -8.550 15.667 3.330 0.941 0.523 CAL PFN 1
PFN CAJ CAJ C 0 1 Y N N N N N -9.662 -8.742 15.987 4.596 1.166 0.019 CAJ PFN 2
PFN CAP CAP C 0 1 Y N N N N N -10.057 -10.000 16.419 5.356 0.106 -0.442 CAP PFN 3
PFN CAI CAI C 0 1 Y N N N N N -9.169 -11.053 16.514 4.851 -1.180 -0.398 CAI PFN 4
PFN CAK CAK C 0 1 Y N N N N N -7.839 -10.891 16.185 3.585 -1.410 0.106 CAK PFN 5
PFN CAR CAR C 0 1 Y N N N N N -7.432 -9.627 15.759 2.821 -0.349 0.568 CAR PFN 6
PFN OAN OAN O 0 1 N N N N N N -6.148 -9.445 15.371 1.578 -0.573 1.070 OAN PFN 7
PFN CAO CAO C 0 1 N N N N N N -4.873 -10.010 20.106 -4.101 -0.627 -0.150 CAO PFN 8
PFN OAB OAB O 0 1 N N N N N N -5.572 -11.012 20.379 -3.639 -1.077 -1.172 OAB PFN 9
PFN OAA OAA O 0 1 N N N N N N -5.203 -8.796 20.300 -5.386 -0.854 0.162 OAA PFN 10
PFN CAM CAM C 0 1 N N N N N N -2.552 -9.175 19.634 -3.830 1.590 0.927 CAM PFN 11
PFN CAH CAH C 0 1 Y N N N N N -4.286 -10.945 15.194 0.702 0.492 -0.869 CAH PFN 12
PFN CAF CAF C 0 1 Y N N N N N -3.191 -11.573 15.791 -0.382 0.975 -1.575 CAF PFN 13
PFN C2 C2 C 0 1 Y N N N N N -5.122 -10.126 15.951 0.513 -0.092 0.375 C2 PFN 14
PFN CAD CAD C 0 1 Y N N N N N -2.941 -11.386 17.145 -1.655 0.877 -1.043 CAD PFN 15
PFN C13 C13 C 0 1 N N R N N N -3.519 -10.332 19.412 -3.234 0.190 0.773 C13 PFN 16
PFN CAE CAE C 0 1 Y N N N N N -3.779 -10.559 17.908 -1.846 0.295 0.196 CAE PFN 17
PFN CAG CAG C 0 1 Y N N N N N -4.868 -9.924 17.307 -0.764 -0.185 0.909 CAG PFN 18
PFN HAK HAK H 0 1 N N N N N N -7.140 -11.711 16.255 3.191 -2.415 0.139 HAK PFN 19
PFN HAI HAI H 0 1 N N N N N N -9.521 -12.017 16.851 5.446 -2.006 -0.759 HAI PFN 20
PFN HAP HAP H 0 1 N N N N N N -11.090 -10.160 16.689 6.345 0.284 -0.837 HAP PFN 21
PFN HAJ HAJ H 0 1 N N N N N N -10.375 -7.935 15.902 4.993 2.170 -0.017 HAJ PFN 22
PFN HAL HAL H 0 1 N N N N N N -7.977 -7.579 15.349 2.738 1.769 0.886 HAL PFN 23
PFN HAA HAA H 0 1 N N N N N N -6.070 -8.761 20.688 -5.903 -1.383 -0.461 HAA PFN 24
PFN H13 H13 H 0 1 N N N N N N -3.070 -11.242 19.837 -3.186 -0.294 1.749 H13 PFN 25
PFN HAM1 HAM1 H 0 0 N N N N N N -2.319 -9.092 20.706 -4.834 1.514 1.344 HAM1 PFN 26
PFN HAM2 HAM2 H 0 0 N N N N N N -1.625 -9.359 19.071 -3.203 2.181 1.594 HAM2 PFN 27
PFN HAM3 HAM3 H 0 0 N N N N N N -3.014 -8.239 19.286 -3.878 2.074 -0.049 HAM3 PFN 28
PFN HAG HAG H 0 1 N N N N N N -5.510 -9.280 17.889 -0.913 -0.639 1.877 HAG PFN 29
PFN HAD HAD H 0 1 N N N N N N -2.100 -11.878 17.611 -2.501 1.256 -1.597 HAD PFN 30
PFN HAF HAF H 0 1 N N N N N N -2.540 -12.202 15.202 -0.236 1.430 -2.544 HAF PFN 31
PFN HAH HAH H 0 1 N N N N N N -4.486 -11.094 14.143 1.695 0.565 -1.287 HAH PFN 32
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
PFN CAK CAI DOUB Y N 1
PFN CAK CAR SING Y N 2
PFN CAI CAP SING Y N 3
PFN CAP CAJ DOUB Y N 4
PFN CAJ CAL SING Y N 5
PFN CAL CAR DOUB Y N 6
PFN CAR OAN SING N N 7
PFN OAN C2 SING N N 8
PFN CAO OAB DOUB N N 9
PFN CAO OAA SING N N 10
PFN CAO C13 SING N N 11
PFN CAM C13 SING N N 12
PFN CAG CAE SING Y N 13
PFN CAG C2 DOUB Y N 14
PFN CAE CAD DOUB Y N 15
PFN CAE C13 SING N N 16
PFN CAD CAF SING Y N 17
PFN CAF CAH DOUB Y N 18
PFN CAH C2 SING Y N 19
PFN CAK HAK SING N N 20
PFN CAI HAI SING N N 21
PFN CAP HAP SING N N 22
PFN CAJ HAJ SING N N 23
PFN CAL HAL SING N N 24
PFN OAA HAA SING N N 25
PFN C13 H13 SING N N 26
PFN CAM HAM1 SING N N 27
PFN CAM HAM2 SING N N 28
PFN CAM HAM3 SING N N 29
PFN CAG HAG SING N N 30
PFN CAD HAD SING N N 31
PFN CAF HAF SING N N 32
PFN CAH HAH SING N N 33
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
PFN SMILES ACDLabs 10.04 O=C(O)C(c2cc(Oc1ccccc1)ccc2)C
PFN SMILES_CANONICAL CACTVS 3.352 C[C@@H](C(O)=O)c1cccc(Oc2ccccc2)c1
PFN SMILES CACTVS 3.352 C[CH](C(O)=O)c1cccc(Oc2ccccc2)c1
PFN SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 C[C@H](c1cccc(c1)Oc2ccccc2)C(=O)O
PFN SMILES "OpenEye OEToolkits" 1.6.1 CC(c1cccc(c1)Oc2ccccc2)C(=O)O
PFN InChI InChI 1.03 InChI=1S/C15H14O3/c1-11(15(16)17)12-6-5-9-14(10-12)18-13-7-3-2-4-8-13/h2-11H,1H3,(H,16,17)/t11-/m1/s1
PFN InChIKey InChI 1.03 RDJGLLICXDHJDY-LLVKDONJSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
PFN "SYSTEMATIC NAME" ACDLabs 10.04 "(2R)-2-(3-phenoxyphenyl)propanoic acid"
PFN "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "(2R)-2-(3-phenoxyphenyl)propanoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
PFN 'Create component' 2010-02-26 EBI
PFN 'Modify aromatic_flag' 2011-06-04 RCSB
PFN 'Modify descriptor' 2011-06-04 RCSB
PFN 'Modify synonyms' 2020-06-05 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id PFN
_pdbx_chem_comp_synonyms.name "(2R)-2-(3-PHENOXYPHENYL)PROPANOIC ACID"
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id PFN
_pdbe_chem_comp_synonyms.name '(2R)-2-(3-PHENOXYPHENYL)PROPANOIC ACID'
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
PFN CAL C 5.598 -3.607 1
PFN CAJ C 5.598 -5.107 2
PFN CAP C 4.299 -5.857 3
PFN CAI C 3.000 -5.107 4
PFN CAK C 3.000 -3.607 5
PFN CAR C 4.299 -2.857 6
PFN OAN O 4.299 -1.357 7
PFN CAO C 8.196 3.893 8
PFN OAB O 8.196 5.393 9
PFN OAA O 9.495 3.143 10
PFN CAM C 5.598 3.893 11
PFN CAH C 6.897 -1.357 12
PFN CAF C 8.196 -0.608 13
PFN C2 C 5.598 -0.608 14
PFN CAD C 8.196 0.892 15
PFN C13 C 6.897 3.143 16
PFN CAE C 6.897 1.643 17
PFN CAG C 5.598 0.892 18
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
PFN CAK CAI SINGLE NONE 1
PFN CAK CAR DOUBLE NONE 2
PFN CAI CAP DOUBLE NONE 3
PFN CAP CAJ SINGLE NONE 4
PFN CAJ CAL DOUBLE NONE 5
PFN CAL CAR SINGLE NONE 6
PFN CAR OAN SINGLE NONE 7
PFN OAN C2 SINGLE NONE 8
PFN CAO OAB DOUBLE NONE 9
PFN CAO OAA SINGLE NONE 10
PFN CAO C13 SINGLE NONE 11
PFN C13 CAM SINGLE BEGINWEDGE 12
PFN CAG CAE SINGLE NONE 13
PFN CAG C2 DOUBLE NONE 14
PFN CAE CAD DOUBLE NONE 15
PFN CAE C13 SINGLE NONE 16
PFN CAD CAF SINGLE NONE 17
PFN CAF CAH DOUBLE NONE 18
PFN CAH C2 SINGLE NONE 19
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
PFN MurckoScaffold S1 scaffold c1ccc(Oc2ccccc2)cc1 InChI=1S/C12H10O/c1-3-7-11(8-4-1)13-12-9-5-2-6-10-12/h1-10H USIUVYZYUHIAEV-UHFFFAOYSA-N
PFN phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
PFN CAL S1 1
PFN CAJ S1 1
PFN CAP S1 1
PFN CAI S1 1
PFN CAK S1 1
PFN CAR S1 1
PFN OAN S1 1
PFN CAH S1 1
PFN CAF S1 1
PFN C2 S1 1
PFN CAD S1 1
PFN CAE S1 1
PFN CAG S1 1
PFN CAL F1 1
PFN CAJ F1 1
PFN CAP F1 1
PFN CAI F1 1
PFN CAK F1 1
PFN CAR F1 1
PFN CAH F1 2
PFN CAF F1 2
PFN CAD F1 2
PFN CAE F1 2
PFN CAG F1 2
PFN C2 F1 2
#
_pdbe_chem_comp_rdkit_properties.comp_id PFN
_pdbe_chem_comp_rdkit_properties.exactmw 242.094
_pdbe_chem_comp_rdkit_properties.amw 242.274
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 3
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 5
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 18
_pdbe_chem_comp_rdkit_properties.NumAtoms 32
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 3
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.133
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 125.409
_pdbe_chem_comp_rdkit_properties.tpsa 46.530
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.687
_pdbe_chem_comp_rdkit_properties.CrippenMR 67.523
_pdbe_chem_comp_rdkit_properties.chi0v 8.725
_pdbe_chem_comp_rdkit_properties.chi1v 4.566
_pdbe_chem_comp_rdkit_properties.chi2v 1.737
_pdbe_chem_comp_rdkit_properties.chi3v 1.737
_pdbe_chem_comp_rdkit_properties.chi4v 0.996
_pdbe_chem_comp_rdkit_properties.chi0n 22.725
_pdbe_chem_comp_rdkit_properties.chi1n 11.475
_pdbe_chem_comp_rdkit_properties.chi2n 1.737
_pdbe_chem_comp_rdkit_properties.chi3n 1.737
_pdbe_chem_comp_rdkit_properties.chi4n 0.996
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.290
_pdbe_chem_comp_rdkit_properties.kappa1 3.604
_pdbe_chem_comp_rdkit_properties.kappa2 5.361
_pdbe_chem_comp_rdkit_properties.kappa3 2.884
_pdbe_chem_comp_rdkit_properties.Phi 1.074
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
PFN UniChem ZINC ZINC000000402909
PFN UniChem fdasrs S651283H42
PFN UniChem SureChEMBL SCHEMBL4082
PFN UniChem BRENDA 94899
PFN UniChem 'Probes And Drugs' PD132684
PFN UniChem CCDC GETPAW
PFN UniChem Nikkaji J245.600A
PFN UniChem PubChem 41097863
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
PFN CAL 4.049 0.320 -1.253 ETKDGv3 1
PFN CAJ 5.280 0.033 -0.811 ETKDGv3 2
PFN CAP 5.476 -0.434 0.577 ETKDGv3 3
PFN CAI 4.424 -0.562 1.395 ETKDGv3 4
PFN CAK 3.066 -0.240 0.910 ETKDGv3 5
PFN CAR 2.878 0.165 -0.361 ETKDGv3 6
PFN OAN 1.609 0.500 -0.857 ETKDGv3 7
PFN CAO -3.962 0.945 1.060 ETKDGv3 8
PFN OAB -3.678 1.921 1.805 ETKDGv3 9
PFN OAA -4.847 -0.031 1.510 ETKDGv3 10
PFN CAM -4.264 0.247 -1.336 ETKDGv3 11
PFN CAH 0.349 -1.528 -0.037 ETKDGv3 12
PFN CAF -0.820 -2.082 0.302 ETKDGv3 13
PFN C2 0.403 -0.111 -0.481 ETKDGv3 14
PFN CAD -2.065 -1.293 0.228 ETKDGv3 15
PFN C13 -3.302 0.817 -0.287 ETKDGv3 16
PFN CAE -2.037 -0.011 -0.190 ETKDGv3 17
PFN CAG -0.734 0.594 -0.570 ETKDGv3 18
PFN HAK 2.234 -0.315 1.598 ETKDGv3 19
PFN HAI 4.566 -0.897 2.414 ETKDGv3 20
PFN HAP 6.472 -0.667 0.931 ETKDGv3 21
PFN HAJ 6.133 0.143 -1.467 ETKDGv3 22
PFN HAL 3.908 0.664 -2.270 ETKDGv3 23
PFN HAA -5.279 0.041 2.424 ETKDGv3 24
PFN H13 -3.037 1.844 -0.627 ETKDGv3 25
PFN HAM1 -3.763 0.206 -2.327 ETKDGv3 26
PFN HAM2 -5.158 0.901 -1.426 ETKDGv3 27
PFN HAM3 -4.599 -0.777 -1.065 ETKDGv3 28
PFN HAG -0.697 1.621 -0.912 ETKDGv3 29
PFN HAD -2.996 -1.766 0.510 ETKDGv3 30
PFN HAF -0.858 -3.116 0.620 ETKDGv3 31
PFN HAH 1.249 -2.128 -0.006 ETKDGv3 32
#