HEADER Ideal coordinates for PDB-CCD PED COMPND PED AUTHOR pdbccdutils 1.0.0 AUTHOR RDKit 2025.03.3 HETATM 1 P PED A 1 -2.567 0.061 -0.043 1.00 20.00 P HETATM 2 O1P PED A 1 -2.764 -0.106 -1.500 1.00 20.00 O HETATM 3 O2P PED A 1 -2.795 1.604 0.357 1.00 20.00 O HETATM 4 O3P PED A 1 -3.623 -0.860 0.750 1.00 20.00 O HETATM 5 O5' PED A 1 -1.069 -0.380 0.351 1.00 20.00 O HETATM 6 C2' PED A 1 3.844 -0.413 0.375 1.00 20.00 C HETATM 7 C5' PED A 1 0.093 0.178 -0.265 1.00 20.00 C HETATM 8 C4' PED A 1 1.346 -0.460 0.339 1.00 20.00 C HETATM 9 O4' PED A 1 1.377 -1.851 0.013 1.00 20.00 O HETATM 10 C3' PED A 1 2.591 0.225 -0.229 1.00 20.00 C HETATM 11 C1' PED A 1 5.088 0.185 -0.284 1.00 20.00 C HETATM 12 O3' PED A 1 2.560 1.616 0.097 1.00 20.00 O HETATM 13 HOP2 PED A 1 -2.681 1.787 1.299 1.00 20.00 H HETATM 14 HOP3 PED A 1 -4.548 -0.650 0.562 1.00 20.00 H HETATM 15 H2'1 PED A 1 3.871 -0.217 1.447 1.00 20.00 H HETATM 16 H2'2 PED A 1 3.823 -1.489 0.203 1.00 20.00 H HETATM 17 H5'1 PED A 1 0.066 -0.018 -1.337 1.00 20.00 H HETATM 18 H5'2 PED A 1 0.114 1.254 -0.093 1.00 20.00 H HETATM 19 H4'1 PED A 1 1.328 -0.341 1.422 1.00 20.00 H HETATM 20 HO'4 PED A 1 1.394 -2.032 -0.936 1.00 20.00 H HETATM 21 H3' PED A 1 2.609 0.105 -1.312 1.00 20.00 H HETATM 22 H1'1 PED A 1 5.062 -0.012 -1.356 1.00 20.00 H HETATM 23 H1'2 PED A 1 5.109 1.261 -0.112 1.00 20.00 H HETATM 24 H1'3 PED A 1 5.981 -0.270 0.146 1.00 20.00 H HETATM 25 H3T PED A 1 2.543 1.797 1.047 1.00 20.00 H CONECT 1 2 2 3 4 5 CONECT 3 13 CONECT 4 14 CONECT 5 7 CONECT 6 10 11 15 16 CONECT 7 8 17 18 CONECT 8 9 10 19 CONECT 9 20 CONECT 10 12 21 CONECT 11 22 23 24 CONECT 12 25 END