data_OTG
#
_chem_comp.id OTG
_chem_comp.name 2-deoxy-2-{[(2-methylphenyl)carbonyl]amino}-alpha-D-glucopyranose
_chem_comp.type "D-saccharide, alpha linking"
_chem_comp.pdbx_type ATOMS
_chem_comp.formula "C14 H19 N O6"
_chem_comp.mon_nstd_parent_comp_id PA1
_chem_comp.pdbx_synonyms
;ORTHO-TOLUOYLGLUCOSAMINE; N-[(2-methylphenyl)carbonyl]-alpha-D-glucosamine;
2-deoxy-2-{[(2-methylphenyl)carbonyl]amino}-alpha-D-glucose; 2-deoxy-2-{[(2-methylphenyl)carbonyl]amino}-D-glucose;
2-deoxy-2-{[(2-methylphenyl)carbonyl]amino}-glucose
;
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2020-07-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 297.304
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code OTG
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2YHX
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1 OTG ORTHO-TOLUOYLGLUCOSAMINE PDB ?
2 OTG N-[(2-methylphenyl)carbonyl]-alpha-D-glucosamine PDB ?
3 OTG 2-deoxy-2-{[(2-methylphenyl)carbonyl]amino}-alpha-D-glucose PDB ?
4 OTG 2-deoxy-2-{[(2-methylphenyl)carbonyl]amino}-D-glucose PDB ?
5 OTG 2-deoxy-2-{[(2-methylphenyl)carbonyl]amino}-glucose PDB ?
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
OTG C1 C1 C 0 1 N N S N N N 61.996 -15.771 5.437 1.046 -0.470 -1.337 C1 OTG 1
OTG O1 O1 O 0 1 N Y N N N N 62.208 -14.483 6.021 0.608 -1.828 -1.417 O1 OTG 2
OTG C2 C2 C 0 1 N N R N N N 63.258 -16.632 5.624 -0.060 0.386 -0.719 C2 OTG 3
OTG N2 N2 N 0 1 N N N N N N 63.548 -16.771 7.062 -0.350 -0.090 0.635 N2 OTG 4
OTG C3 C3 C 0 1 N N R N N N 64.452 -15.956 4.923 -1.321 0.275 -1.583 C3 OTG 5
OTG O3 O3 O 0 1 N N N N N N 65.578 -16.842 4.939 -2.317 1.184 -1.108 O3 OTG 6
OTG C4 C4 C 0 1 N N S N N N 64.079 -15.629 3.466 -0.956 0.623 -3.030 C4 OTG 7
OTG O4 O4 O 0 1 N N N N N N 65.116 -14.846 2.872 -2.079 0.381 -3.880 O4 OTG 8
OTG C5 C5 C 0 1 N N R N N N 62.757 -14.840 3.437 0.218 -0.251 -3.474 C5 OTG 9
OTG O5 O5 O 0 1 N N N N N N 61.722 -15.621 4.042 1.351 0.005 -2.646 O5 OTG 10
OTG C6 C6 C 0 1 N N N N N N 62.378 -14.519 1.981 0.568 0.068 -4.929 C6 OTG 11
OTG O6 O6 O 0 1 N N N N N N 62.173 -15.738 1.259 1.661 -0.752 -5.347 O6 OTG 12
OTG "C1'" "C1'" C 0 1 Y N N N N N 63.804 -18.440 10.090 0.625 0.550 4.156 "C1'" OTG 13
OTG "C2'" "C2'" C 0 1 Y N N N N N 64.377 -18.274 8.824 0.023 -0.059 3.054 "C2'" OTG 14
OTG "C3'" "C3'" C 0 1 Y N N N N N 65.759 -18.113 8.708 -0.846 -1.133 3.248 "C3'" OTG 15
OTG "C4'" "C4'" C 0 1 Y N N N N N 66.513 -17.784 9.840 -1.115 -1.577 4.526 "C4'" OTG 16
OTG "C5'" "C5'" C 0 1 Y N N N N N 65.912 -17.833 11.103 -0.519 -0.965 5.614 "C5'" OTG 17
OTG "C6'" "C6'" C 0 1 Y N N N N N 64.615 -18.340 11.227 0.348 0.095 5.429 "C6'" OTG 18
OTG "C7'" "C7'" C 0 1 N N N N N N 62.281 -18.370 10.243 1.572 1.706 3.956 "C7'" OTG 19
OTG "C8'" "C8'" C 0 1 N N N N N N 63.483 -17.962 7.635 0.316 0.422 1.687 "C8'" OTG 20
OTG "O8'" "O8'" O 0 1 N N N N N N 62.884 -18.880 7.069 1.159 1.280 1.513 "O8'" OTG 21
OTG H1 H1 H 0 1 N N N N N N 61.130 -16.268 5.934 1.939 -0.413 -0.714 H1 OTG 22
OTG HO1 HO1 H 0 1 N Y N N N N 61.429 -13.951 5.905 1.332 -2.332 -1.810 HO1 OTG 23
OTG H2 H2 H 0 1 N N N N N N 63.088 -17.640 5.178 0.262 1.426 -0.677 H2 OTG 24
OTG HN21 HN2 H 0 0 N N N N N N 63.805 -16.008 7.688 -1.023 -0.775 0.774 HN21 OTG 25
OTG H3 H3 H 0 1 N N N N N N 64.710 -15.013 5.459 -1.705 -0.743 -1.537 H3 OTG 26
OTG HO3 HO3 H 0 1 N Y N N N N 66.314 -16.425 4.506 -3.084 1.085 -1.688 HO3 OTG 27
OTG H4 H4 H 0 1 N N N N N N 63.956 -16.577 2.893 -0.672 1.673 -3.091 H4 OTG 28
OTG HO4 HO4 H 0 1 N Y N N N N 64.885 -14.644 1.972 -1.803 0.608 -4.779 HO4 OTG 29
OTG H5 H5 H 0 1 N N N N N N 62.881 -13.887 4.003 -0.059 -1.301 -3.390 H5 OTG 30
OTG H61 H61 H 0 1 N N N N N N 61.497 -13.838 1.915 -0.296 -0.128 -5.562 H61 OTG 31
OTG H62 H62 H 0 1 N N N N N N 63.128 -13.858 1.486 0.849 1.118 -5.012 H62 OTG 32
OTG HO6 HO6 H 0 1 N Y N N N N 61.939 -15.539 0.359 1.848 -0.519 -6.267 HO6 OTG 33
OTG "H3'" "H3'" H 0 1 N N N N N N 66.251 -18.244 7.729 -1.311 -1.612 2.399 "H3'" OTG 34
OTG "H4'" "H4'" H 0 1 N N N N N N 67.570 -17.488 9.737 -1.792 -2.405 4.677 "H4'" OTG 35
OTG "H5'" "H5'" H 0 1 N N N N N N 66.456 -17.475 11.993 -0.733 -1.317 6.613 "H5'" OTG 36
OTG "H6'" "H6'" H 0 1 N N N N N N 64.235 -18.658 12.212 0.810 0.569 6.283 "H6'" OTG 37
OTG "H7'1" "H7'1" H 0 0 N N N N N N 61.824 -18.502 11.251 2.567 1.325 3.729 "H7'1" OTG 38
OTG "H7'2" "H7'2" H 0 0 N N N N N N 61.924 -17.404 9.814 1.221 2.323 3.129 "H7'2" OTG 39
OTG "H7'3" "H7'3" H 0 0 N N N N N N 61.818 -19.105 9.543 1.610 2.305 4.866 "H7'3" OTG 40
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
OTG C1 O1 SING N N 1
OTG C1 C2 SING N N 2
OTG C1 O5 SING N N 3
OTG C1 H1 SING N N 4
OTG O1 HO1 SING N N 5
OTG C2 N2 SING N N 6
OTG C2 C3 SING N N 7
OTG C2 H2 SING N N 8
OTG N2 "C8'" SING N N 9
OTG N2 HN21 SING N N 10
OTG C3 O3 SING N N 11
OTG C3 C4 SING N N 12
OTG C3 H3 SING N N 13
OTG O3 HO3 SING N N 14
OTG C4 O4 SING N N 15
OTG C4 C5 SING N N 16
OTG C4 H4 SING N N 17
OTG O4 HO4 SING N N 18
OTG C5 O5 SING N N 19
OTG C5 C6 SING N N 20
OTG C5 H5 SING N N 21
OTG C6 O6 SING N N 22
OTG C6 H61 SING N N 23
OTG C6 H62 SING N N 24
OTG O6 HO6 SING N N 25
OTG "C1'" "C2'" DOUB Y N 26
OTG "C1'" "C6'" SING Y N 27
OTG "C1'" "C7'" SING N N 28
OTG "C2'" "C3'" SING Y N 29
OTG "C2'" "C8'" SING N N 30
OTG "C3'" "C4'" DOUB Y N 31
OTG "C3'" "H3'" SING N N 32
OTG "C4'" "C5'" SING Y N 33
OTG "C4'" "H4'" SING N N 34
OTG "C5'" "C6'" DOUB Y N 35
OTG "C5'" "H5'" SING N N 36
OTG "C6'" "H6'" SING N N 37
OTG "C7'" "H7'1" SING N N 38
OTG "C7'" "H7'2" SING N N 39
OTG "C7'" "H7'3" SING N N 40
OTG "C8'" "O8'" DOUB N N 41
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
OTG SMILES ACDLabs 10.04 O=C(NC1C(O)C(O)C(OC1O)CO)c2ccccc2C
OTG SMILES_CANONICAL CACTVS 3.341 Cc1ccccc1C(=O)N[C@H]2[C@@H](O)O[C@H](CO)[C@@H](O)[C@@H]2O
OTG SMILES CACTVS 3.341 Cc1ccccc1C(=O)N[CH]2[CH](O)O[CH](CO)[CH](O)[CH]2O
OTG SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 Cc1ccccc1C(=O)N[C@@H]2[C@H]([C@@H]([C@H](O[C@@H]2O)CO)O)O
OTG SMILES "OpenEye OEToolkits" 1.5.0 Cc1ccccc1C(=O)NC2C(C(C(OC2O)CO)O)O
OTG InChI InChI 1.03 InChI=1S/C14H19NO6/c1-7-4-2-3-5-8(7)13(19)15-10-12(18)11(17)9(6-16)21-14(10)20/h2-5,9-12,14,16-18,20H,6H2,1H3,(H,15,19)/t9-,10-,11-,12-,14+/m1/s1
OTG InChIKey InChI 1.03 ZWRASUMSHKKCJN-SKENRDBWSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
OTG "SYSTEMATIC NAME" ACDLabs 10.04 2-deoxy-2-{[(2-methylphenyl)carbonyl]amino}-alpha-D-glucopyranose
OTG "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 2-methyl-N-[(2S,3R,4R,5S,6R)-2,4,5-trihydroxy-6-(hydroxymethyl)oxan-3-yl]benzamide
#
_pdbx_chem_comp_related.comp_id OTG
_pdbx_chem_comp_related.related_comp_id PA1
_pdbx_chem_comp_related.relationship_type "Carbohydrate core"
_pdbx_chem_comp_related.details ?
#
loop_
_pdbx_chem_comp_atom_related.ordinal
_pdbx_chem_comp_atom_related.comp_id
_pdbx_chem_comp_atom_related.atom_id
_pdbx_chem_comp_atom_related.related_comp_id
_pdbx_chem_comp_atom_related.related_atom_id
_pdbx_chem_comp_atom_related.related_type
1 OTG C1 PA1 C1 "Carbohydrate core"
2 OTG C2 PA1 C2 "Carbohydrate core"
3 OTG C3 PA1 C3 "Carbohydrate core"
4 OTG C4 PA1 C4 "Carbohydrate core"
5 OTG C5 PA1 C5 "Carbohydrate core"
6 OTG C6 PA1 C6 "Carbohydrate core"
7 OTG N2 PA1 N2 "Carbohydrate core"
8 OTG O1 PA1 O1 "Carbohydrate core"
9 OTG O3 PA1 O3 "Carbohydrate core"
10 OTG O4 PA1 O4 "Carbohydrate core"
11 OTG O5 PA1 O5 "Carbohydrate core"
12 OTG O6 PA1 O6 "Carbohydrate core"
13 OTG H1 PA1 H1 "Carbohydrate core"
14 OTG H2 PA1 H2 "Carbohydrate core"
15 OTG H3 PA1 H3 "Carbohydrate core"
16 OTG H4 PA1 H4 "Carbohydrate core"
17 OTG H5 PA1 H5 "Carbohydrate core"
18 OTG H61 PA1 H61 "Carbohydrate core"
19 OTG H62 PA1 H62 "Carbohydrate core"
20 OTG HN21 PA1 HN21 "Carbohydrate core"
21 OTG HO1 PA1 HO1 "Carbohydrate core"
22 OTG HO3 PA1 HO3 "Carbohydrate core"
23 OTG HO4 PA1 HO4 "Carbohydrate core"
24 OTG HO6 PA1 HO6 "Carbohydrate core"
#
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
OTG "CARBOHYDRATE ISOMER" D PDB ?
OTG "CARBOHYDRATE RING" pyranose PDB ?
OTG "CARBOHYDRATE ANOMER" alpha PDB ?
OTG "CARBOHYDRATE PRIMARY CARBONYL GROUP" aldose PDB ?
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
OTG 'Create component' 1999-07-08 RCSB
OTG 'Modify descriptor' 2011-06-04 RCSB
OTG 'Other modification' 2020-07-03 RCSB
OTG 'Modify parent residue' 2020-07-17 RCSB
OTG 'Modify name' 2020-07-17 RCSB
OTG 'Modify synonyms' 2020-07-17 RCSB
OTG 'Modify internal type' 2020-07-17 RCSB
OTG 'Modify linking type' 2020-07-17 RCSB
OTG 'Modify atom id' 2020-07-17 RCSB
OTG 'Modify component atom id' 2020-07-17 RCSB
OTG 'Modify leaving atom flag' 2020-07-17 RCSB
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
OTG ORTHO-TOLUOYLGLUCOSAMINE wwPDB ?
OTG 'N-[(2-methylphenyl)carbonyl]-alpha-D-glucosamine' wwPDB ?
OTG '2-deoxy-2-{[(2-methylphenyl)carbonyl]amino}-alpha-D-glucose' wwPDB ?
OTG '2-deoxy-2-{[(2-methylphenyl)carbonyl]amino}-D-glucose' wwPDB ?
OTG '2-deoxy-2-{[(2-methylphenyl)carbonyl]amino}-glucose' wwPDB ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
OTG C1 C 7.702 0.892 1
OTG O1 O 9.002 1.643 2
OTG C2 C 7.702 -0.608 3
OTG N2 N 9.002 -1.357 4
OTG C3 C 6.404 -1.357 5
OTG O3 O 6.404 -2.857 6
OTG C4 C 5.104 -0.608 7
OTG O4 O 3.805 -1.357 8
OTG C5 C 5.104 0.892 9
OTG O5 O 6.404 1.643 10
OTG C6 C 3.805 1.643 11
OTG O6 O 3.805 3.143 12
OTG "C1'" C 11.600 -2.857 13
OTG "C2'" C 11.600 -1.357 14
OTG "C3'" C 12.899 -0.608 15
OTG "C4'" C 14.198 -1.357 16
OTG "C5'" C 14.198 -2.857 17
OTG "C6'" C 12.899 -3.607 18
OTG "C7'" C 10.301 -3.607 19
OTG "C8'" C 10.301 -0.608 20
OTG "O8'" O 10.301 0.892 21
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
OTG C1 O1 SINGLE BEGINDASH 1
OTG C1 C2 SINGLE NONE 2
OTG C1 O5 SINGLE NONE 3
OTG C2 N2 SINGLE BEGINDASH 4
OTG C2 C3 SINGLE NONE 5
OTG N2 "C8'" SINGLE NONE 6
OTG C3 O3 SINGLE BEGINWEDGE 7
OTG C3 C4 SINGLE NONE 8
OTG C4 O4 SINGLE BEGINDASH 9
OTG C4 C5 SINGLE NONE 10
OTG C5 O5 SINGLE NONE 11
OTG C5 C6 SINGLE BEGINWEDGE 12
OTG C6 O6 SINGLE NONE 13
OTG "C1'" "C2'" DOUBLE NONE 14
OTG "C1'" "C6'" SINGLE NONE 15
OTG "C1'" "C7'" SINGLE NONE 16
OTG "C2'" "C3'" SINGLE NONE 17
OTG "C2'" "C8'" SINGLE NONE 18
OTG "C3'" "C4'" DOUBLE NONE 19
OTG "C4'" "C5'" SINGLE NONE 20
OTG "C5'" "C6'" DOUBLE NONE 21
OTG "C8'" "O8'" DOUBLE NONE 22
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
OTG MurckoScaffold S1 scaffold 'O=C(N[C@@H]1CCCOC1)c1ccccc1' InChI=1S/C12H15NO2/c14-12(10-5-2-1-3-6-10)13-11-7-4-8-15-9-11/h1-3,5-6,11H,4,7-9H2,(H,13,14)/t11-/m1/s1 KSTOAACFCMVXAY-LLVKDONJSA-N
OTG amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
OTG phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
OTG pyranose F3 fragment OC1CCCCO1 InChI=1S/C5H10O2/c6-5-3-1-2-4-7-5/h5-6H,1-4H2 CELWCAITJAEQNL-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
OTG C1 S1 1
OTG C2 S1 1
OTG N2 S1 1
OTG C3 S1 1
OTG C4 S1 1
OTG C5 S1 1
OTG O5 S1 1
OTG "C1'" S1 1
OTG "C2'" S1 1
OTG "C3'" S1 1
OTG "C4'" S1 1
OTG "C5'" S1 1
OTG "C6'" S1 1
OTG "C8'" S1 1
OTG "O8'" S1 1
OTG N2 F1 1
OTG "C8'" F1 1
OTG "O8'" F1 1
OTG "C2'" F1 1
OTG "C1'" F2 1
OTG "C2'" F2 1
OTG "C3'" F2 1
OTG "C4'" F2 1
OTG "C5'" F2 1
OTG "C6'" F2 1
OTG C4 F3 1
OTG C5 F3 1
OTG O5 F3 1
OTG C1 F3 1
OTG C2 F3 1
OTG C3 F3 1
OTG O1 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id OTG
_pdbe_chem_comp_rdkit_properties.exactmw 297.121
_pdbe_chem_comp_rdkit_properties.amw 297.307
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 7
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 5
_pdbe_chem_comp_rdkit_properties.NumHBA 6
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 21
_pdbe_chem_comp_rdkit_properties.NumAtoms 40
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 7
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.500
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 5
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 148.446
_pdbe_chem_comp_rdkit_properties.tpsa 119.250
_pdbe_chem_comp_rdkit_properties.CrippenClogP -1.585
_pdbe_chem_comp_rdkit_properties.CrippenMR 71.880
_pdbe_chem_comp_rdkit_properties.chi0v 9.897
_pdbe_chem_comp_rdkit_properties.chi1v 5.126
_pdbe_chem_comp_rdkit_properties.chi2v 2.223
_pdbe_chem_comp_rdkit_properties.chi3v 2.223
_pdbe_chem_comp_rdkit_properties.chi4v 1.285
_pdbe_chem_comp_rdkit_properties.chi0n 28.897
_pdbe_chem_comp_rdkit_properties.chi1n 14.206
_pdbe_chem_comp_rdkit_properties.chi2n 2.223
_pdbe_chem_comp_rdkit_properties.chi3n 2.223
_pdbe_chem_comp_rdkit_properties.chi4n 1.285
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.510
_pdbe_chem_comp_rdkit_properties.kappa1 4.273
_pdbe_chem_comp_rdkit_properties.kappa2 6.504
_pdbe_chem_comp_rdkit_properties.kappa3 3.224
_pdbe_chem_comp_rdkit_properties.Phi 1.323
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
OTG UniChem ZINC ZINC000006523237
OTG UniChem PubChem 449419
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
OTG C1 -1.885 -1.499 -0.068 ETKDGv3 1
OTG O1 -1.170 -2.705 -0.013 ETKDGv3 2
OTG C2 -0.986 -0.351 -0.596 ETKDGv3 3
OTG N2 0.390 -0.502 -0.108 ETKDGv3 4
OTG C3 -1.537 1.033 -0.162 ETKDGv3 5
OTG O3 -1.254 2.011 -1.132 ETKDGv3 6
OTG C4 -3.047 0.960 0.135 ETKDGv3 7
OTG O4 -3.511 2.204 0.594 ETKDGv3 8
OTG C5 -3.308 -0.127 1.222 ETKDGv3 9
OTG O5 -2.356 -1.189 1.230 ETKDGv3 10
OTG C6 -4.734 -0.699 1.140 ETKDGv3 11
OTG O6 -5.690 0.313 1.311 ETKDGv3 12
OTG "C1'" 3.880 0.682 -0.480 ETKDGv3 13
OTG "C2'" 2.897 -0.245 -0.325 ETKDGv3 14
OTG "C3'" 3.197 -1.501 0.412 ETKDGv3 15
OTG "C4'" 4.419 -1.729 0.904 ETKDGv3 16
OTG "C5'" 5.487 -0.733 0.717 ETKDGv3 17
OTG "C6'" 5.236 0.403 0.061 ETKDGv3 18
OTG "C7'" 3.653 1.996 -1.181 ETKDGv3 19
OTG "C8'" 1.528 -0.063 -0.866 ETKDGv3 20
OTG "O8'" 1.363 0.458 -2.002 ETKDGv3 21
OTG H1 -2.750 -1.642 -0.761 ETKDGv3 22
OTG HO1 -1.008 -2.985 -0.952 ETKDGv3 23
OTG H2 -0.994 -0.430 -1.707 ETKDGv3 24
OTG HN21 0.531 -0.773 0.892 ETKDGv3 25
OTG H3 -1.033 1.342 0.781 ETKDGv3 26
OTG HO3 -1.759 1.775 -1.954 ETKDGv3 27
OTG H4 -3.585 0.679 -0.803 ETKDGv3 28
OTG HO4 -3.651 2.774 -0.207 ETKDGv3 29
OTG H5 -3.215 0.370 2.213 ETKDGv3 30
OTG H61 -4.869 -1.486 1.916 ETKDGv3 31
OTG H62 -4.898 -1.177 0.151 ETKDGv3 32
OTG HO6 -5.701 0.533 2.279 ETKDGv3 33
OTG "H3'" 2.430 -2.254 0.541 ETKDGv3 34
OTG "H4'" 4.629 -2.650 1.432 ETKDGv3 35
OTG "H5'" 6.477 -0.927 1.111 ETKDGv3 36
OTG "H6'" 6.033 1.125 -0.069 ETKDGv3 37
OTG "H7'1" 3.599 1.832 -2.278 ETKDGv3 38
OTG "H7'2" 4.481 2.706 -0.976 ETKDGv3 39
OTG "H7'3" 2.713 2.470 -0.825 ETKDGv3 40
#