data_NPJ
#
_chem_comp.id NPJ
_chem_comp.name "4-NITROPHENYL 4-O-ALPHA-D-GLUCOPYRANOSYL-ALPHA-D-GALACTOPYRANOSIDE"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C18 H25 N O13"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms "P-NITROPHENYL MALTOSIDE"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2006-04-07
_chem_comp.pdbx_modified_date 2020-06-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 463.390
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code NPJ
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 2GGX
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
NPJ C1A C1A C 0 1 N N R N N N 36.913 53.998 1.427 -3.342 -0.859 0.065 C1A NPJ 1
NPJ C2A C2A C 0 1 N N R N N N 38.100 54.644 0.667 -4.374 -0.808 -1.064 C2A NPJ 2
NPJ C3A C3A C 0 1 N N S N N N 39.236 53.579 0.530 -4.462 0.627 -1.596 C3A NPJ 3
NPJ C4A C4A C 0 1 N N S N N N 39.689 53.175 1.948 -4.735 1.570 -0.418 C4A NPJ 4
NPJ C5A C5A C 0 1 N N R N N N 38.459 52.567 2.691 -3.674 1.340 0.661 C5A NPJ 5
NPJ C6A C6A C 0 1 N N N N N N 38.871 52.171 4.110 -3.917 2.302 1.826 C6A NPJ 6
NPJ O1A O1A O 0 1 N N N N N N 36.461 52.867 0.653 -2.074 -0.426 -0.433 O1A NPJ 7
NPJ O2A O2A O 0 1 N N N N N N 37.650 55.042 -0.633 -3.975 -1.687 -2.117 O2A NPJ 8
NPJ O3A O3A O 0 1 N N N N N N 40.355 54.143 -0.167 -5.525 0.722 -2.546 O3A NPJ 9
NPJ O4A O4A O 0 1 N N N N N N 40.743 52.189 1.842 -4.674 2.925 -0.867 O4A NPJ 10
NPJ O5A O5A O 0 1 N N N N N N 37.372 53.569 2.772 -3.749 -0.004 1.132 O5A NPJ 11
NPJ O6A O6A O 0 1 N N N N N N 37.722 51.663 4.801 -2.860 2.172 2.779 O6A NPJ 12
NPJ C1B C1B C 0 1 N N R N N N 32.513 51.667 -0.572 1.592 -1.624 1.012 C1B NPJ 13
NPJ C2B C2B C 0 1 N N R N N N 32.866 53.159 -0.673 0.472 -2.653 1.186 C2B NPJ 14
NPJ C3B C3B C 0 1 N N R N N N 34.392 53.313 -0.668 -0.691 -2.288 0.256 C3B NPJ 15
NPJ C4B C4B C 0 1 N N S N N N 34.940 52.700 0.642 -1.094 -0.833 0.523 C4B NPJ 16
NPJ C5B C5B C 0 1 N N R N N N 34.524 51.209 0.677 0.143 0.059 0.401 C5B NPJ 17
NPJ C6B C6B C 0 1 N N N N N N 35.051 50.576 1.966 -0.255 1.518 0.635 C6B NPJ 18
NPJ O1B O1B O 0 1 N N N N N N 32.992 50.940 -1.713 2.019 -1.613 -0.352 O1B NPJ 19
NPJ O2B O2B O 0 1 N N N N N N 32.327 53.703 -1.883 0.960 -3.954 0.853 O2B NPJ 20
NPJ O3B O3B O 0 1 N N N N N N 34.736 54.705 -0.749 -1.802 -3.148 0.513 O3B NPJ 21
NPJ O5B O5B O 0 1 N N N N N N 33.070 51.093 0.654 1.116 -0.328 1.369 O5B NPJ 22
NPJ O6B O6B O 0 1 N N N N N N 34.679 49.195 2.008 0.877 2.362 0.415 O6B NPJ 23
NPJ C1C C1C C 0 1 Y N N N N N 32.104 47.235 -3.641 5.479 0.628 -0.500 C1C NPJ 24
NPJ C2C C2C C 0 1 Y N N N N N 31.758 47.459 -2.262 4.840 0.424 0.709 C2C NPJ 25
NPJ C3C C3C C 0 1 Y N N N N N 32.058 48.666 -1.659 3.681 -0.326 0.761 C3C NPJ 26
NPJ C4C C4C C 0 1 Y N N N N N 32.708 49.696 -2.390 3.158 -0.875 -0.401 C4C NPJ 27
NPJ C5C C5C C 0 1 Y N N N N N 33.062 49.502 -3.751 3.804 -0.673 -1.612 C5C NPJ 28
NPJ C6C C6C C 0 1 Y N N N N N 32.768 48.290 -4.377 4.960 0.082 -1.660 C6C NPJ 29
NPJ N1C N1C N 1 1 N N N N N N 31.802 46.043 -4.228 6.720 1.433 -0.553 N1C NPJ 30
NPJ O2C O2C O -1 1 N N N N N N 32.085 45.830 -5.397 7.178 1.914 0.467 O2C NPJ 31
NPJ O3C O3C O 0 1 N N N N N N 31.240 45.167 -3.587 7.284 1.613 -1.618 O3C NPJ 32
NPJ H1A H1A H 0 1 N N N N N N 36.086 54.711 1.558 -3.257 -1.881 0.432 H1A NPJ 33
NPJ H2A H2A H 0 1 N N N N N N 38.479 55.523 1.209 -5.348 -1.115 -0.681 H2A NPJ 34
NPJ H3A H3A H 0 1 N N N N N N 38.864 52.708 -0.028 -3.520 0.899 -2.072 H3A NPJ 35
NPJ H4A H4A H 0 1 N N N N N N 40.069 54.045 2.503 -5.724 1.365 -0.009 H4A NPJ 36
NPJ H5A H5A H 0 1 N N N N N N 38.105 51.684 2.138 -2.685 1.522 0.241 H5A NPJ 37
NPJ H6A1 1H6A H 0 0 N N N N N N 39.650 51.396 4.067 -4.867 2.062 2.302 H6A1 NPJ 38
NPJ H6A2 2H6A H 0 0 N N N N N N 39.268 53.048 4.642 -3.946 3.325 1.452 H6A2 NPJ 39
NPJ HO2A HO2A H 0 0 N N N N N N 36.704 55.130 -0.628 -3.927 -2.574 -1.737 HO2A NPJ 40
NPJ HO3A HO3A H 0 0 N N N N N N 40.129 54.268 -1.081 -5.317 0.104 -3.261 HO3A NPJ 41
NPJ HO4A HO4A H 0 0 N N N N N N 40.884 51.973 0.928 -5.352 3.024 -1.549 HO4A NPJ 42
NPJ HO6A HO6A H 0 0 N N N N N N 37.929 51.551 5.721 -3.051 2.793 3.494 HO6A NPJ 43
NPJ H1B H1B H 0 1 N N N N N N 31.417 51.583 -0.545 2.432 -1.891 1.652 H1B NPJ 44
NPJ H2B H2B H 0 1 N N N N N N 32.437 53.700 0.183 0.128 -2.646 2.220 H2B NPJ 45
NPJ H3B H3B H 0 1 N N N N N N 34.832 52.794 -1.532 -0.377 -2.396 -0.782 H3B NPJ 46
NPJ H4B H4B H 0 1 N N N N N N 34.535 53.200 1.534 -1.507 -0.748 1.528 H4B NPJ 47
NPJ H5B H5B H 0 1 N N N N N N 34.943 50.696 -0.201 0.565 -0.045 -0.599 H5B NPJ 48
NPJ H6B1 1H6B H 0 0 N N N N N N 36.147 50.661 1.994 -1.052 1.792 -0.055 H6B1 NPJ 49
NPJ H6B2 2H6B H 0 0 N N N N N N 34.619 51.098 2.833 -0.604 1.639 1.661 H6B2 NPJ 50
NPJ HO2B HO2B H 0 0 N N N N N N 32.208 54.640 -1.784 1.689 -4.144 1.460 HO2B NPJ 51
NPJ HO3B HO3B H 0 0 N N N N N N 34.812 55.064 0.127 -1.505 -4.051 0.333 HO3B NPJ 52
NPJ HO6B HO6B H 0 0 N N N N N N 34.597 48.862 1.122 0.584 3.270 0.573 HO6B NPJ 53
NPJ H2C H2C H 0 1 N N N N N N 31.263 46.683 -1.697 5.248 0.851 1.613 H2C NPJ 54
NPJ H3C H3C H 0 1 N N N N N N 31.796 48.827 -0.624 3.182 -0.485 1.706 H3C NPJ 55
NPJ H5C H5C H 0 1 N N N N N N 33.557 50.289 -4.300 3.399 -1.099 -2.518 H5C NPJ 56
NPJ H6C H6C H 0 1 N N N N N N 33.036 48.139 -5.412 5.461 0.244 -2.603 H6C NPJ 57
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
NPJ C1A C2A SING N N 1
NPJ C1A O1A SING N N 2
NPJ C1A O5A SING N N 3
NPJ C1A H1A SING N N 4
NPJ C2A C3A SING N N 5
NPJ C2A O2A SING N N 6
NPJ C2A H2A SING N N 7
NPJ C3A C4A SING N N 8
NPJ C3A O3A SING N N 9
NPJ C3A H3A SING N N 10
NPJ C4A C5A SING N N 11
NPJ C4A O4A SING N N 12
NPJ C4A H4A SING N N 13
NPJ C5A C6A SING N N 14
NPJ C5A O5A SING N N 15
NPJ C5A H5A SING N N 16
NPJ C6A O6A SING N N 17
NPJ C6A H6A1 SING N N 18
NPJ C6A H6A2 SING N N 19
NPJ O1A C4B SING N N 20
NPJ O2A HO2A SING N N 21
NPJ O3A HO3A SING N N 22
NPJ O4A HO4A SING N N 23
NPJ O6A HO6A SING N N 24
NPJ C1B C2B SING N N 25
NPJ C1B O1B SING N N 26
NPJ C1B O5B SING N N 27
NPJ C1B H1B SING N N 28
NPJ C2B C3B SING N N 29
NPJ C2B O2B SING N N 30
NPJ C2B H2B SING N N 31
NPJ C3B C4B SING N N 32
NPJ C3B O3B SING N N 33
NPJ C3B H3B SING N N 34
NPJ C4B C5B SING N N 35
NPJ C4B H4B SING N N 36
NPJ C5B C6B SING N N 37
NPJ C5B O5B SING N N 38
NPJ C5B H5B SING N N 39
NPJ C6B O6B SING N N 40
NPJ C6B H6B1 SING N N 41
NPJ C6B H6B2 SING N N 42
NPJ O1B C4C SING N N 43
NPJ O2B HO2B SING N N 44
NPJ O3B HO3B SING N N 45
NPJ O6B HO6B SING N N 46
NPJ C1C C2C DOUB Y N 47
NPJ C1C C6C SING Y N 48
NPJ C1C N1C SING N N 49
NPJ C2C C3C SING Y N 50
NPJ C2C H2C SING N N 51
NPJ C3C C4C DOUB Y N 52
NPJ C3C H3C SING N N 53
NPJ C4C C5C SING Y N 54
NPJ C5C C6C DOUB Y N 55
NPJ C5C H5C SING N N 56
NPJ C6C H6C SING N N 57
NPJ N1C O2C SING N N 58
NPJ N1C O3C DOUB N N 59
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
NPJ SMILES ACDLabs 10.04 "[O-][N+](=O)c3ccc(OC2OC(C(OC1OC(CO)C(O)C(O)C1O)C(O)C2O)CO)cc3"
NPJ SMILES_CANONICAL CACTVS 3.341 OC[C@H]1O[C@H](O[C@H]2[C@H](O)[C@@H](O)[C@H](O[C@@H]2CO)Oc3ccc(cc3)[N+]([O-])=O)[C@H](O)[C@@H](O)[C@@H]1O
NPJ SMILES CACTVS 3.341 OC[CH]1O[CH](O[CH]2[CH](O)[CH](O)[CH](O[CH]2CO)Oc3ccc(cc3)[N+]([O-])=O)[CH](O)[CH](O)[CH]1O
NPJ SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 c1cc(ccc1[N+](=O)[O-])O[C@@H]2[C@@H]([C@H]([C@@H]([C@H](O2)CO)O[C@@H]3[C@@H]([C@H]([C@@H]([C@H](O3)CO)O)O)O)O)O
NPJ SMILES "OpenEye OEToolkits" 1.5.0 c1cc(ccc1[N+](=O)[O-])OC2C(C(C(C(O2)CO)OC3C(C(C(C(O3)CO)O)O)O)O)O
NPJ InChI InChI 1.03 InChI=1S/C18H25NO13/c20-5-9-11(22)12(23)14(25)18(30-9)32-16-10(6-21)31-17(15(26)13(16)24)29-8-3-1-7(2-4-8)19(27)28/h1-4,9-18,20-26H,5-6H2/t9-,10-,11-,12+,13-,14-,15-,16-,17+,18-/m1/s1
NPJ InChIKey InChI 1.03 IAYJZWFYUSNIPN-LTHBGAKLSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
NPJ "SYSTEMATIC NAME" ACDLabs 10.04 "4-nitrophenyl 4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranoside"
NPJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 (2R,3R,4S,5S,6R)-2-[(2R,3S,4R,5R,6R)-4,5-dihydroxy-2-(hydroxymethyl)-6-(4-nitrophenoxy)oxan-3-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
NPJ 'Create component' 2006-04-07 RCSB
NPJ 'Modify descriptor' 2011-06-04 RCSB
NPJ 'Modify synonyms' 2020-06-05 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id NPJ
_pdbx_chem_comp_synonyms.name "P-NITROPHENYL MALTOSIDE"
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id NPJ
_pdbe_chem_comp_synonyms.name 'P-NITROPHENYL MALTOSIDE'
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
NPJ C1A C 9.002 -3.518 1
NPJ C2A C 9.002 -5.018 2
NPJ C3A C 7.702 -5.768 3
NPJ C4A C 6.404 -5.018 4
NPJ C5A C 6.404 -3.518 5
NPJ C6A C 5.104 -2.768 6
NPJ O1A O 10.301 -2.768 7
NPJ O2A O 10.301 -5.768 8
NPJ O3A O 7.702 -7.268 9
NPJ O4A O 5.104 -5.768 10
NPJ O5A O 7.702 -2.768 11
NPJ O6A O 3.805 -3.518 12
NPJ C1B C 10.301 1.732 13
NPJ C2B C 11.600 0.983 14
NPJ C3B C 11.600 -0.517 15
NPJ C4B C 10.301 -1.268 16
NPJ C5B C 9.002 -0.517 17
NPJ C6B C 7.702 -1.268 18
NPJ O1B O 10.301 3.232 19
NPJ O2B O 12.899 1.732 20
NPJ O3B O 12.899 -1.268 21
NPJ O5B O 9.002 0.983 22
NPJ O6B O 6.404 -0.517 23
NPJ C1C C 6.404 5.482 24
NPJ C2C C 7.702 6.232 25
NPJ C3C C 9.002 5.482 26
NPJ C4C C 9.002 3.982 27
NPJ C5C C 7.702 3.232 28
NPJ C6C C 6.404 3.982 29
NPJ N1C N 5.104 6.232 30
NPJ O2C O 5.104 7.732 31
NPJ O3C O 3.805 5.482 32
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
NPJ C1A C2A SINGLE NONE 1
NPJ C1A O1A SINGLE BEGINDASH 2
NPJ C1A O5A SINGLE NONE 3
NPJ C2A C3A SINGLE NONE 4
NPJ C2A O2A SINGLE BEGINDASH 5
NPJ C3A C4A SINGLE NONE 6
NPJ C3A O3A SINGLE BEGINWEDGE 7
NPJ C4A C5A SINGLE NONE 8
NPJ C4A O4A SINGLE BEGINDASH 9
NPJ C5A C6A SINGLE BEGINWEDGE 10
NPJ C5A O5A SINGLE NONE 11
NPJ C6A O6A SINGLE NONE 12
NPJ C4B O1A SINGLE BEGINDASH 13
NPJ C1B C2B SINGLE NONE 14
NPJ C1B O1B SINGLE BEGINDASH 15
NPJ C1B O5B SINGLE NONE 16
NPJ C2B C3B SINGLE NONE 17
NPJ C2B O2B SINGLE BEGINDASH 18
NPJ C3B C4B SINGLE NONE 19
NPJ C3B O3B SINGLE BEGINWEDGE 20
NPJ C4B C5B SINGLE NONE 21
NPJ C5B C6B SINGLE BEGINWEDGE 22
NPJ C5B O5B SINGLE NONE 23
NPJ C6B O6B SINGLE NONE 24
NPJ O1B C4C SINGLE NONE 25
NPJ C1C C2C DOUBLE NONE 26
NPJ C1C C6C SINGLE NONE 27
NPJ C1C N1C SINGLE NONE 28
NPJ C2C C3C SINGLE NONE 29
NPJ C3C C4C DOUBLE NONE 30
NPJ C4C C5C SINGLE NONE 31
NPJ C5C C6C DOUBLE NONE 32
NPJ N1C O2C SINGLE NONE 33
NPJ N1C O3C DOUBLE NONE 34
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
NPJ MurckoScaffold S1 scaffold 'c1ccc(O[C@@H]2CC[C@H](O[C@@H]3CCCCO3)CO2)cc1' InChI=1S/C16H22O4/c1-2-6-13(7-3-1)19-16-10-9-14(12-18-16)20-15-8-4-5-11-17-15/h1-3,6-7,14-16H,4-5,8-12H2/t14-,15+,16+/m0/s1 VEQXFYVFJYPIAG-ARFHVFGLSA-N
NPJ phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
NPJ pyranose F2 fragment OC1CCCCO1 InChI=1S/C5H10O2/c6-5-3-1-2-4-7-5/h5-6H,1-4H2 CELWCAITJAEQNL-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
NPJ C1A S1 1
NPJ C2A S1 1
NPJ C3A S1 1
NPJ C4A S1 1
NPJ C5A S1 1
NPJ O1A S1 1
NPJ O5A S1 1
NPJ C1B S1 1
NPJ C2B S1 1
NPJ C3B S1 1
NPJ C4B S1 1
NPJ C5B S1 1
NPJ O1B S1 1
NPJ O5B S1 1
NPJ C1C S1 1
NPJ C2C S1 1
NPJ C3C S1 1
NPJ C4C S1 1
NPJ C5C S1 1
NPJ C6C S1 1
NPJ C1C F1 1
NPJ C2C F1 1
NPJ C3C F1 1
NPJ C4C F1 1
NPJ C5C F1 1
NPJ C6C F1 1
NPJ C4A F2 1
NPJ C5A F2 1
NPJ O5A F2 1
NPJ C1A F2 1
NPJ C2A F2 1
NPJ C3A F2 1
NPJ O1A F2 1
NPJ C4B F2 2
NPJ C5B F2 2
NPJ O5B F2 2
NPJ C1B F2 2
NPJ C2B F2 2
NPJ C3B F2 2
NPJ O1B F2 2
#
_pdbe_chem_comp_rdkit_properties.comp_id NPJ
_pdbe_chem_comp_rdkit_properties.exactmw 463.133
_pdbe_chem_comp_rdkit_properties.amw 463.392
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 14
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 7
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 14
_pdbe_chem_comp_rdkit_properties.NumHBD 7
_pdbe_chem_comp_rdkit_properties.NumHBA 13
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 32
_pdbe_chem_comp_rdkit_properties.NumAtoms 57
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 14
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.667
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 10
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 216.197
_pdbe_chem_comp_rdkit_properties.tpsa 221.670
_pdbe_chem_comp_rdkit_properties.CrippenClogP -4.245
_pdbe_chem_comp_rdkit_properties.CrippenMR 98.691
_pdbe_chem_comp_rdkit_properties.chi0v 14.754
_pdbe_chem_comp_rdkit_properties.chi1v 7.651
_pdbe_chem_comp_rdkit_properties.chi2v 3.344
_pdbe_chem_comp_rdkit_properties.chi3v 3.344
_pdbe_chem_comp_rdkit_properties.chi4v 1.952
_pdbe_chem_comp_rdkit_properties.chi0n 39.754
_pdbe_chem_comp_rdkit_properties.chi1n 19.508
_pdbe_chem_comp_rdkit_properties.chi2n 3.344
_pdbe_chem_comp_rdkit_properties.chi3n 3.344
_pdbe_chem_comp_rdkit_properties.chi4n 1.952
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.980
_pdbe_chem_comp_rdkit_properties.kappa1 7.776
_pdbe_chem_comp_rdkit_properties.kappa2 10.305
_pdbe_chem_comp_rdkit_properties.kappa3 4.991
_pdbe_chem_comp_rdkit_properties.Phi 2.504
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
NPJ UniChem ZINC ZINC000004282193
NPJ UniChem SureChEMBL SCHEMBL14359612
NPJ UniChem 'PubChem TPHARMA' 144217370
NPJ UniChem ACTor 17400-77-0
NPJ UniChem BRENDA 11233
NPJ UniChem BRENDA 130200
NPJ UniChem BRENDA 13357
NPJ UniChem BRENDA 166622
NPJ UniChem BRENDA 19181
NPJ UniChem BRENDA 211919
NPJ UniChem BRENDA 35572
NPJ UniChem BRENDA 42475
NPJ UniChem BRENDA 47651
NPJ UniChem BRENDA 94629
NPJ UniChem ChemicalBook CB7311374
NPJ UniChem PubChem 167654
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
NPJ C1A -2.647 -0.446 0.117 ETKDGv3 1
NPJ C2A -3.259 -0.620 1.535 ETKDGv3 2
NPJ C3A -4.735 -1.095 1.474 ETKDGv3 3
NPJ C4A -5.353 -0.763 0.111 ETKDGv3 4
NPJ C5A -4.492 -1.417 -1.013 ETKDGv3 5
NPJ C6A -4.731 -0.781 -2.392 ETKDGv3 6
NPJ O1A -1.231 -0.505 0.176 ETKDGv3 7
NPJ O2A -2.499 -1.507 2.318 ETKDGv3 8
NPJ O3A -5.485 -0.482 2.490 ETKDGv3 9
NPJ O4A -6.668 -1.257 0.065 ETKDGv3 10
NPJ O5A -3.094 -1.487 -0.732 ETKDGv3 11
NPJ O6A -4.362 0.570 -2.393 ETKDGv3 12
NPJ C1B 2.234 1.459 0.374 ETKDGv3 13
NPJ C2B 1.761 0.309 1.322 ETKDGv3 14
NPJ C3B 0.296 0.519 1.753 ETKDGv3 15
NPJ C4B -0.645 0.740 0.535 ETKDGv3 16
NPJ C5B 0.150 1.285 -0.681 ETKDGv3 17
NPJ C6B -0.768 2.032 -1.659 ETKDGv3 18
NPJ O1B 3.117 0.982 -0.645 ETKDGv3 19
NPJ O2B 1.863 -0.938 0.679 ETKDGv3 20
NPJ O3B 0.198 1.578 2.677 ETKDGv3 21
NPJ O5B 1.163 2.167 -0.236 ETKDGv3 22
NPJ O6B -0.023 2.555 -2.726 ETKDGv3 23
NPJ C1C 7.147 -0.269 -0.154 ETKDGv3 24
NPJ C2C 6.528 -0.350 -1.345 ETKDGv3 25
NPJ C3C 5.127 0.093 -1.494 ETKDGv3 26
NPJ C4C 4.448 0.581 -0.448 ETKDGv3 27
NPJ C5C 5.129 0.679 0.872 ETKDGv3 28
NPJ C6C 6.398 0.277 1.008 ETKDGv3 29
NPJ N1C 8.511 -0.700 -0.001 ETKDGv3 30
NPJ O2C 9.214 -1.206 -1.071 ETKDGv3 31
NPJ O3C 9.078 -0.621 1.108 ETKDGv3 32
NPJ H1A -2.979 0.529 -0.311 ETKDGv3 33
NPJ H2A -3.226 0.375 2.030 ETKDGv3 34
NPJ H3A -4.782 -2.204 1.600 ETKDGv3 35
NPJ H4A -5.364 0.348 -0.000 ETKDGv3 36
NPJ H5A -4.834 -2.472 -1.098 ETKDGv3 37
NPJ H6A1 -5.805 -0.876 -2.666 ETKDGv3 38
NPJ H6A2 -4.131 -1.331 -3.151 ETKDGv3 39
NPJ HO2A -2.442 -2.367 1.826 ETKDGv3 40
NPJ HO3A -5.207 -0.906 3.344 ETKDGv3 41
NPJ HO4A -7.147 -0.738 -0.632 ETKDGv3 42
NPJ HO6A -4.529 0.901 -3.313 ETKDGv3 43
NPJ H1B 2.775 2.210 0.989 ETKDGv3 44
NPJ H2B 2.389 0.309 2.245 ETKDGv3 45
NPJ H3B -0.029 -0.396 2.294 ETKDGv3 46
NPJ H4B -1.395 1.507 0.848 ETKDGv3 47
NPJ H5B 0.597 0.434 -1.248 ETKDGv3 48
NPJ H6B1 -1.270 2.874 -1.136 ETKDGv3 49
NPJ H6B2 -1.556 1.349 -2.048 ETKDGv3 50
NPJ HO2B 2.765 -1.300 0.880 ETKDGv3 51
NPJ HO3B 0.422 2.422 2.207 ETKDGv3 52
NPJ HO6B 0.200 1.791 -3.319 ETKDGv3 53
NPJ H2C 7.041 -0.741 -2.214 ETKDGv3 54
NPJ H3C 4.648 0.015 -2.462 ETKDGv3 55
NPJ H5C 4.615 1.074 1.736 ETKDGv3 56
NPJ H6C 6.876 0.355 1.976 ETKDGv3 57
#