data_MTL
#
_chem_comp.id MTL
_chem_comp.name D-MANNITOL
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C6 H14 O6"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2002-07-10
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 182.172
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code MTL
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1M2W
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
MTL O1 O1 O 0 1 N N N N N N 69.525 74.921 44.219 -0.080 0.000 4.306 O1 MTL 1
MTL C1 C1 C 0 1 N N N N N N 69.274 74.877 42.800 0.660 0.000 3.084 C1 MTL 2
MTL C2 C2 C 0 1 N N R N N N 68.848 76.281 42.374 -0.308 0.000 1.900 C2 MTL 3
MTL O2 O2 O 0 1 N N N N N N 69.886 77.260 42.659 -1.131 1.166 1.958 O2 MTL 4
MTL C3 C3 C 0 1 N N R N N N 68.454 76.299 40.893 0.484 0.000 0.591 C3 MTL 5
MTL O3 O3 O 0 1 N N N N N N 67.202 75.563 40.766 1.307 -1.166 0.533 O3 MTL 6
MTL C4 C4 C 0 1 N N R N N N 68.251 77.757 40.409 -0.484 0.000 -0.591 C4 MTL 7
MTL O4 O4 O 0 1 N N N N N N 67.010 78.272 40.903 -1.307 -1.166 -0.533 O4 MTL 8
MTL C5 C5 C 0 1 N N R N N N 68.222 77.795 38.880 0.308 0.000 -1.900 C5 MTL 9
MTL O5 O5 O 0 1 N N N N N N 69.496 77.423 38.357 1.131 1.166 -1.958 O5 MTL 10
MTL C6 C6 C 0 1 N N N N N N 67.834 79.228 38.352 -0.660 0.000 -3.084 C6 MTL 11
MTL O6 O6 O 0 1 N N N N N N 68.069 79.254 36.946 0.080 0.000 -4.306 O6 MTL 12
MTL HO1 HO1 H 0 1 N N N N N N 69.789 74.048 44.483 0.566 0.000 5.025 HO1 MTL 13
MTL H11 1H1 H 0 1 N N N N N N 70.139 74.486 42.215 1.288 0.890 3.039 H11 MTL 14
MTL H12 2H1 H 0 1 N N N N N N 68.538 74.090 42.510 1.288 -0.890 3.039 H12 MTL 15
MTL H2 H2 H 0 1 N N N N N N 67.952 76.566 42.973 -0.936 -0.890 1.944 H2 MTL 16
MTL HO2 HO2 H 0 1 N N N N N N 69.621 78.133 42.394 -0.538 1.929 1.916 HO2 MTL 17
MTL H3 H3 H 0 1 N N N N N N 69.255 75.834 40.272 1.112 0.890 0.547 H3 MTL 18
MTL HO3 HO3 H 0 1 N N N N N N 66.957 75.574 39.848 0.714 -1.929 0.575 HO3 MTL 19
MTL H4 H4 H 0 1 N N N N N N 69.094 78.378 40.791 -1.112 0.890 -0.547 H4 MTL 20
MTL HO4 HO4 H 0 1 N N N N N N 66.885 79.165 40.606 -0.714 -1.929 -0.575 HO4 MTL 21
MTL H5 H5 H 0 1 N N N N N N 67.448 77.070 38.534 0.936 -0.890 -1.944 H5 MTL 22
MTL HO5 HO5 H 0 1 N N N N N N 69.478 77.446 37.407 0.538 1.929 -1.916 HO5 MTL 23
MTL H61 1H6 H 0 1 N N N N N N 66.792 79.520 38.621 -1.288 -0.890 -3.039 H61 MTL 24
MTL H62 2H6 H 0 1 N N N N N N 68.363 80.046 38.894 -1.288 0.890 -3.039 H62 MTL 25
MTL HO6 HO6 H 0 1 N N N N N N 67.835 80.118 36.627 -0.566 0.000 -5.025 HO6 MTL 26
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
MTL O1 C1 SING N N 1
MTL O1 HO1 SING N N 2
MTL C1 C2 SING N N 3
MTL C1 H11 SING N N 4
MTL C1 H12 SING N N 5
MTL C2 O2 SING N N 6
MTL C2 C3 SING N N 7
MTL C2 H2 SING N N 8
MTL O2 HO2 SING N N 9
MTL C3 O3 SING N N 10
MTL C3 C4 SING N N 11
MTL C3 H3 SING N N 12
MTL O3 HO3 SING N N 13
MTL C4 O4 SING N N 14
MTL C4 C5 SING N N 15
MTL C4 H4 SING N N 16
MTL O4 HO4 SING N N 17
MTL C5 O5 SING N N 18
MTL C5 C6 SING N N 19
MTL C5 H5 SING N N 20
MTL O5 HO5 SING N N 21
MTL C6 O6 SING N N 22
MTL C6 H61 SING N N 23
MTL C6 H62 SING N N 24
MTL O6 HO6 SING N N 25
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
MTL SMILES ACDLabs 10.04 OC(C(O)CO)C(O)C(O)CO
MTL SMILES_CANONICAL CACTVS 3.341 OC[C@@H](O)[C@@H](O)[C@H](O)[C@H](O)CO
MTL SMILES CACTVS 3.341 OC[CH](O)[CH](O)[CH](O)[CH](O)CO
MTL SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 C([C@H]([C@H]([C@@H]([C@@H](CO)O)O)O)O)O
MTL SMILES "OpenEye OEToolkits" 1.5.0 C(C(C(C(C(CO)O)O)O)O)O
MTL InChI InChI 1.03 InChI=1S/C6H14O6/c7-1-3(9)5(11)6(12)4(10)2-8/h3-12H,1-2H2/t3-,4-,5-,6-/m1/s1
MTL InChIKey InChI 1.03 FBPFZTCFMRRESA-KVTDHHQDSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
MTL "SYSTEMATIC NAME" ACDLabs 10.04 D-mannitol
MTL "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 (2R,3R,4R,5R)-hexane-1,2,3,4,5,6-hexol
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
MTL 'Create component' 2002-07-10 RCSB
MTL 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id MTL
_pdbe_chem_comp_drugbank_details.drugbank_id DB00742
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name Mannitol
_pdbe_chem_comp_drugbank_details.description
'Mannitol is an osmotic diuretic that is metabolically inert in humans and occurs naturally, as a sugar or sugar alcohol, in fruits and vegetables. Mannitol elevates blood plasma osmolality, resulting in enhanced flow of water from tissues, including the brain and cerebrospinal fluid, into interstitial fluid and plasma. As a result, cerebral edema, elevated intracranial pressure, and cerebrospinal fluid volume and pressure may be reduced. Mannitol may also be used for the promotion of diuresis before irreversible renal failure becomes established; the promotion of urinary excretion of toxic substances; as an Antiglaucoma agent; and as a renal function diagnostic aid.  On October 30, 2020, mannitol was approved by the FDA as add-on maintenance therapy for the control of pulmonary symptoms associated with cystic fibrosis in adult patients and is currently marketed for this indication under the name BRONCHITOL® by Chiesi USA Inc.[L20024]'
_pdbe_chem_comp_drugbank_details.cas_number 69-65-8
_pdbe_chem_comp_drugbank_details.mechanism_of_action
'Mannitol is an osmotic diuretic that is metabolically inert in humans and occurs naturally, as a sugar or sugar alcohol, in fruits and vegetables. Mannitol elevates blood plasma osmolality, resulting in enhanced flow of water from tissues, including the brain and cerebrospinal fluid, into interstitial fluid and plasma. As a result, cerebral edema, elevated intracranial pressure, and cerebrospinal fluid volume and pressure may be reduced. As a diurectic mannitol induces diuresis because it is not reabsorbed in the renal tubule, thereby increasing the osmolality of the glomerular filtrate, facilitating excretion of water, and inhibiting the renal tubular reabsorption of sodium, chloride, and other solutes. Mannitol promotes the urinary excretion of toxic materials and protects against nephrotoxicity by preventing the concentration of toxic substances in the tubular fluid. As an Antiglaucoma agent mannitol levates blood plasma osmolarity, resulting in enhanced flow of water from the eye into plasma and a consequent reduction in intraocular pressure. As a renal function diagnostic aid mannitol is freely filtered by the glomeruli with less than 10% tubular reabsorption. Therefore, its urinary excretion rate may serve as a measurement of glomerular filtration rate (GFR).  The exact mechanism of action of inhaled mannitol in the symptomatic maintenance treatment of cystic fibrosis remains unclear.[A223199, L20024] It is hypothesized that mannitol produces an osmotic gradient across the airway epithelium that draws fluid into the extracellular space and alters the properties of the airway surface mucus layer, allowing easier mucociliary clearance.[A223199]'
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
MTL (2R,3R,4R,5R)-hexane-1,2,3,4,5,6-hexaol DrugBank ?
MTL (2R,3R,4R,5R)-hexane-1,2,3,4,5,6-hexol DrugBank ?
MTL D-(-)-Mannitol DrugBank ?
MTL D-Mannitol DrugBank ?
MTL 'Manna Sugar' DrugBank ?
MTL Mannit DrugBank ?
MTL Mannite DrugBank ?
MTL Mannitol DrugBank ?
MTL Mannitolum DrugBank ?
MTL Anol DrugBank 'International brand'
MTL Aridol DrugBank 'International brand'
MTL Deltamannit DrugBank 'International brand'
MTL Demanitol DrugBank 'International brand'
MTL Diurecide DrugBank 'International brand'
MTL Isotol DrugBank 'International brand'
MTL Manicol DrugBank 'International brand'
MTL Manit DrugBank 'International brand'
MTL 'Manitol Mein' DrugBank 'International brand'
MTL Maniton DrugBank 'International brand'
MTL Mannigen DrugBank 'International brand'
MTL Mannisol DrugBank 'International brand'
MTL 'Mannisol A' DrugBank 'International brand'
MTL Mannit DrugBank 'International brand'
MTL 'Mannit-Lösung' DrugBank 'International brand'
MTL 'Mannite Actipharm' DrugBank 'International brand'
MTL Osmofundin DrugBank 'International brand'
MTL Osmohale DrugBank 'International brand'
MTL Osmosol DrugBank 'International brand'
MTL Osmosteril DrugBank 'International brand'
MTL Resectisol DrugBank 'International brand'
#
_pdbe_chem_comp_drugbank_classification.comp_id MTL
_pdbe_chem_comp_drugbank_classification.drugbank_id DB00742
_pdbe_chem_comp_drugbank_classification.parent 'Sugar alcohols'
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Organooxygen compounds'
_pdbe_chem_comp_drugbank_classification.superclass 'Organic oxygen compounds'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as sugar alcohols. These are hydrogenated forms of carbohydrate in which the carbonyl group (aldehyde or ketone, reducing sugar) has been reduced to a primary or secondary hydroxyl group.'
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
MTL O1 O 12.899 -0.375 1
MTL C1 C 11.600 0.375 2
MTL C2 C 10.301 -0.375 3
MTL O2 O 10.301 -1.875 4
MTL C3 C 9.002 0.375 5
MTL O3 O 9.002 1.875 6
MTL C4 C 7.702 -0.375 7
MTL O4 O 7.702 -1.875 8
MTL C5 C 6.404 0.375 9
MTL O5 O 6.404 1.875 10
MTL C6 C 5.104 -0.375 11
MTL O6 O 3.805 0.375 12
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
MTL O1 C1 SINGLE NONE 1
MTL C1 C2 SINGLE NONE 2
MTL C2 O2 SINGLE BEGINWEDGE 3
MTL C2 C3 SINGLE NONE 4
MTL C3 O3 SINGLE BEGINDASH 5
MTL C3 C4 SINGLE NONE 6
MTL C4 O4 SINGLE BEGINDASH 7
MTL C4 C5 SINGLE NONE 8
MTL C5 O5 SINGLE BEGINWEDGE 9
MTL C5 C6 SINGLE NONE 10
MTL C6 O6 SINGLE NONE 11
#
#
#
_pdbe_chem_comp_rdkit_properties.comp_id MTL
_pdbe_chem_comp_rdkit_properties.exactmw 182.079
_pdbe_chem_comp_rdkit_properties.amw 182.172
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 6
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 6
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 11
_pdbe_chem_comp_rdkit_properties.NumHBD 6
_pdbe_chem_comp_rdkit_properties.NumHBA 6
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 12
_pdbe_chem_comp_rdkit_properties.NumAtoms 26
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 6
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 1
_pdbe_chem_comp_rdkit_properties.NumRings 0
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 4
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 89.519
_pdbe_chem_comp_rdkit_properties.tpsa 121.380
_pdbe_chem_comp_rdkit_properties.CrippenClogP -3.585
_pdbe_chem_comp_rdkit_properties.CrippenMR 38.199
_pdbe_chem_comp_rdkit_properties.chi0v 5.449
_pdbe_chem_comp_rdkit_properties.chi1v 2.475
_pdbe_chem_comp_rdkit_properties.chi2v 0.804
_pdbe_chem_comp_rdkit_properties.chi3v 0.804
_pdbe_chem_comp_rdkit_properties.chi4v 0.299
_pdbe_chem_comp_rdkit_properties.chi0n 19.449
_pdbe_chem_comp_rdkit_properties.chi1n 8.924
_pdbe_chem_comp_rdkit_properties.chi2n 0.804
_pdbe_chem_comp_rdkit_properties.chi3n 0.804
_pdbe_chem_comp_rdkit_properties.chi4n 0.299
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.240
_pdbe_chem_comp_rdkit_properties.kappa1 2.221
_pdbe_chem_comp_rdkit_properties.kappa2 5.413
_pdbe_chem_comp_rdkit_properties.kappa3 3.015
_pdbe_chem_comp_rdkit_properties.Phi 1.002
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
MTL UniChem DrugBank DB00742
MTL UniChem 'PubChem DOTF' 125299321
MTL UniChem 'KEGG LIGAND' C00392
MTL UniChem ChEBI 16899
MTL UniChem ZINC ZINC000002041302
MTL UniChem eMolecules 483939
MTL UniChem atlas mannitol
MTL UniChem fdasrs 3OWL53L36A
MTL UniChem SureChEMBL SCHEMBL919
MTL UniChem HMDB HMDB0000765
MTL UniChem Selleck D-Mannitol(Osmitrol)
MTL UniChem 'PubChem TPHARMA' 16045072
MTL UniChem NMRShiftDB 60006045
MTL UniChem ACTor 123897-58-5
MTL UniChem 'EPA CompTox Dashboard' DTXSID1023235
MTL UniChem 'EPA CompTox Dashboard' DTXSID30858955
MTL UniChem DrugCentral 935
MTL UniChem MetaboLights MTBLC16899
MTL UniChem BRENDA 1791
MTL UniChem BRENDA 210609
MTL UniChem BRENDA 266134
MTL UniChem BRENDA 495
MTL UniChem Rhea 16899
MTL UniChem ChemicalBook CB11452502
MTL UniChem ChemicalBook CB4720971
MTL UniChem ChemicalBook CB7720972
MTL UniChem DailyMed MANNITOL
MTL UniChem ClinicalTrials BRONCHITOL
MTL UniChem ClinicalTrials D-MANNITOL
MTL UniChem ClinicalTrials MANNITOL
MTL UniChem ClinicalTrials OSMITROL
MTL UniChem ClinicalTrials RESECTISOL
MTL UniChem rxnorm 'ALEXITOL SODIUM'
MTL UniChem rxnorm MANNITOL
MTL UniChem rxnorm OSMITROL
MTL UniChem rxnorm RESECTISOL
MTL UniChem MedChemExpress HY-N0378
MTL UniChem 'Probes And Drugs' PD009837
MTL UniChem CCDC DMANTL
MTL UniChem Nikkaji J2.369H
MTL UniChem 'PubChem TPHARMA' 15195196
MTL UniChem PubChem 6251
MTL UniChem ACTor 133-43-7
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
MTL O1 -3.361 -0.991 0.653 ETKDGv3 1
MTL C1 -2.261 -0.617 -0.130 ETKDGv3 2
MTL C2 -1.628 0.655 0.449 ETKDGv3 3
MTL O2 -1.067 0.377 1.705 ETKDGv3 4
MTL C3 -0.601 1.328 -0.503 ETKDGv3 5
MTL O3 -0.218 2.562 0.052 ETKDGv3 6
MTL C4 0.668 0.507 -0.883 ETKDGv3 7
MTL O4 0.308 -0.648 -1.597 ETKDGv3 8
MTL C5 1.632 0.188 0.308 ETKDGv3 9
MTL O5 2.967 0.460 -0.044 ETKDGv3 10
MTL C6 1.521 -1.247 0.873 ETKDGv3 11
MTL O6 2.010 -2.200 -0.034 ETKDGv3 12
MTL HO1 -3.736 -1.807 0.231 ETKDGv3 13
MTL H11 -1.525 -1.448 -0.138 ETKDGv3 14
MTL H12 -2.601 -0.425 -1.172 ETKDGv3 15
MTL H2 -2.465 1.383 0.583 ETKDGv3 16
MTL HO2 -1.012 1.237 2.198 ETKDGv3 17
MTL H3 -1.149 1.531 -1.454 ETKDGv3 18
MTL HO3 0.111 3.130 -0.693 ETKDGv3 19
MTL H4 1.225 1.178 -1.583 ETKDGv3 20
MTL HO4 1.081 -0.889 -2.172 ETKDGv3 21
MTL H5 1.394 0.877 1.146 ETKDGv3 22
MTL HO5 3.175 -0.056 -0.866 ETKDGv3 23
MTL H61 0.467 -1.493 1.102 ETKDGv3 24
MTL H62 2.077 -1.307 1.837 ETKDGv3 25
MTL HO6 2.985 -2.285 0.133 ETKDGv3 26
#