data_MGT
#
_chem_comp.id MGT
_chem_comp.name "7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C11 H20 N5 O14 P3"
_chem_comp.mon_nstd_parent_comp_id G
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 539.223
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code MGT
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1AV6
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
MGT PG PG P 0 1 N N N N N N 13.984 53.782 75.286 1.209 0.371 6.774 PG MGT 1
MGT O1G O1G O 0 1 N N N N N N 15.205 53.704 76.135 2.161 -0.702 6.412 O1G MGT 2
MGT O2G O2G O 0 1 N N N N N N 13.967 53.094 73.993 1.883 1.338 7.870 O2G MGT 3
MGT O3G O3G O 0 1 N Y N N N N 12.905 53.063 76.258 -0.129 -0.281 7.385 O3G MGT 4
MGT O3B O3B O 0 1 N N N N N N 13.379 55.277 75.042 0.839 1.225 5.460 O3B MGT 5
MGT PB PB P 0 1 N N R N N N 13.946 56.839 74.952 0.173 0.201 4.412 PB MGT 6
MGT O1B O1B O 0 1 N N N N N N 12.757 57.706 75.189 1.140 -0.870 4.086 O1B MGT 7
MGT O2B O2B O 0 1 N N N N N N 15.128 56.983 75.842 -1.148 -0.449 5.063 O2B MGT 8
MGT O3A O3A O 0 1 N N N N N N 14.472 57.180 73.505 -0.224 0.992 3.067 O3A MGT 9
MGT PA PA P 0 1 N N S N N N 13.675 57.014 72.073 -0.881 -0.087 2.069 PA MGT 10
MGT O1A O1A O 0 1 N N N N N N 14.262 55.884 71.319 0.102 -1.154 1.780 O1A MGT 11
MGT O2A O2A O 0 1 N N N N N N 12.229 57.160 72.131 -2.184 -0.732 2.759 O2A MGT 12
MGT "O5'" O5* O 0 1 N N N N N N 14.308 58.366 71.455 -1.304 0.639 0.696 "O5'" MGT 13
MGT "C5'" C5* C 0 1 N N N N N N 13.864 59.714 71.686 -1.877 -0.365 -0.142 "C5'" MGT 14
MGT "C4'" C4* C 0 1 N N R N N N 14.040 60.567 70.422 -2.303 0.262 -1.471 "C4'" MGT 15
MGT "O4'" O4* O 0 1 N N N N N N 15.412 60.431 69.898 -1.158 0.811 -2.158 "O4'" MGT 16
MGT "C3'" C3* C 0 1 N N S N N N 13.023 60.131 69.309 -2.856 -0.818 -2.426 "C3'" MGT 17
MGT "O3'" O3* O 0 1 N N N N N N 11.775 60.851 69.198 -4.284 -0.837 -2.389 "O3'" MGT 18
MGT "C2'" C2* C 0 1 N N R N N N 13.757 60.621 68.125 -2.355 -0.377 -3.822 "C2'" MGT 19
MGT "O2'" O2* O 0 1 N N N N N N 13.550 62.068 68.057 -3.459 -0.114 -4.690 "O2'" MGT 20
MGT "C1'" C1* C 0 1 N N R N N N 15.229 60.246 68.509 -1.557 0.914 -3.542 "C1'" MGT 21
MGT N9 N9 N 0 1 N N N N N N 15.653 58.821 68.245 -0.379 0.985 -4.409 N9 MGT 22
MGT C8 C8 C 0 1 N N N N N N 15.065 57.598 68.565 -0.070 2.056 -5.363 C8 MGT 23
MGT N7 N7 N 0 1 N N N N N N 15.761 56.568 68.191 1.204 1.675 -5.986 N7 MGT 24
MGT CM7 CM7 C 0 1 N N N N N N 15.481 55.172 68.327 1.935 2.424 -7.012 CM7 MGT 25
MGT C5 C5 C 0 1 N N N N N N 16.895 57.111 67.575 1.586 0.445 -5.409 C5 MGT 26
MGT C6 C6 C 0 1 N N N N N N 18.046 56.496 66.973 2.707 -0.369 -5.626 C6 MGT 27
MGT O6 O6 O 0 1 N N N N N N 18.409 55.335 66.828 3.558 -0.051 -6.443 O6 MGT 28
MGT N1 N1 N 0 1 N N N N N N 18.929 57.417 66.517 2.829 -1.510 -4.916 N1 MGT 29
MGT C2 C2 C 0 1 N N N N N N 18.762 58.758 66.606 1.874 -1.853 -4.009 C2 MGT 30
MGT N2 N2 N 0 1 N N N N N N 19.739 59.487 66.165 2.014 -3.017 -3.296 N2 MGT 31
MGT N3 N3 N 0 1 N N N N N N 17.717 59.358 67.145 0.819 -1.097 -3.803 N3 MGT 32
MGT C4 C4 C 0 1 N N N N N N 16.825 58.478 67.612 0.642 0.052 -4.474 C4 MGT 33
MGT HOG2 2HOG H 0 0 N N N N N N 13.188 53.143 73.451 2.089 0.789 8.639 HOG2 MGT 34
MGT HOG3 3HOG H 0 0 N N N N N N 12.126 53.112 75.716 -0.720 0.450 7.607 HOG3 MGT 35
MGT HOB2 2HOB H 0 0 N N N N N N 15.451 57.874 75.790 -1.751 0.281 5.259 HOB2 MGT 36
MGT HOA2 2HOA H 0 0 N N N N N N 11.769 57.064 71.305 -2.799 -0.005 2.931 HOA2 MGT 37
MGT "H5'1" 1H5* H 0 0 N N N N N N 12.815 59.744 72.062 -2.748 -0.797 0.350 "H5'1" MGT 38
MGT "H5'2" 2H5* H 0 0 N N N N N N 14.371 60.171 72.567 -1.140 -1.146 -0.329 "H5'2" MGT 39
MGT "H4'" H4* H 0 1 N N N N N N 13.847 61.629 70.698 -3.051 1.037 -1.301 "H4'" MGT 40
MGT "H3'" H3* H 0 1 N N N N N N 12.751 59.062 69.472 -2.455 -1.798 -2.167 "H3'" MGT 41
MGT "HO3'" *HO3 H 0 0 N N N N N N 11.159 60.587 68.524 -4.570 -1.528 -3.002 "HO3'" MGT 42
MGT "H2'" H2* H 0 1 N N N N N N 13.458 60.207 67.133 -1.706 -1.140 -4.253 "H2'" MGT 43
MGT "HO2'" *HO2 H 0 0 N N N N N N 12.644 62.215 68.328 -3.951 -0.942 -4.777 "HO2'" MGT 44
MGT "H1'" H1* H 0 1 N N N N N N 15.842 60.910 67.856 -2.189 1.790 -3.690 "H1'" MGT 45
MGT H81 1H8 H 0 1 N N N N N N 14.839 57.544 69.655 0.034 3.007 -4.841 H81 MGT 46
MGT H82 2H8 H 0 1 N N N N N N 14.029 57.541 68.156 -0.852 2.124 -6.119 H82 MGT 47
MGT HM71 1HM7 H 0 0 N N N N N N 16.078 54.287 68.005 2.846 1.887 -7.273 HM71 MGT 48
MGT HM72 2HM7 H 0 0 N N N N N N 15.296 55.017 69.415 1.309 2.531 -7.898 HM72 MGT 49
MGT HM73 3HM7 H 0 0 N N N N N N 14.478 55.030 67.859 2.192 3.411 -6.627 HM73 MGT 50
MGT HN1 HN1 H 0 1 N N N N N N 19.767 57.010 66.116 3.597 -2.087 -5.052 HN1 MGT 51
MGT HN21 1HN2 H 0 0 N N N N N N 20.561 59.111 65.724 1.340 -3.272 -2.646 HN21 MGT 52
MGT HN22 2HN2 H 0 0 N N N N N N 19.648 60.488 66.293 2.787 -3.585 -3.441 HN22 MGT 53
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
MGT PG O1G DOUB N N 1
MGT PG O2G SING N N 2
MGT PG O3G SING N N 3
MGT PG O3B SING N N 4
MGT O2G HOG2 SING N N 5
MGT O3G HOG3 SING N N 6
MGT O3B PB SING N N 7
MGT PB O1B DOUB N N 8
MGT PB O2B SING N N 9
MGT PB O3A SING N N 10
MGT O2B HOB2 SING N N 11
MGT O3A PA SING N N 12
MGT PA O1A DOUB N N 13
MGT PA O2A SING N N 14
MGT PA "O5'" SING N N 15
MGT O2A HOA2 SING N N 16
MGT "O5'" "C5'" SING N N 17
MGT "C5'" "C4'" SING N N 18
MGT "C5'" "H5'1" SING N N 19
MGT "C5'" "H5'2" SING N N 20
MGT "C4'" "O4'" SING N N 21
MGT "C4'" "C3'" SING N N 22
MGT "C4'" "H4'" SING N N 23
MGT "O4'" "C1'" SING N N 24
MGT "C3'" "O3'" SING N N 25
MGT "C3'" "C2'" SING N N 26
MGT "C3'" "H3'" SING N N 27
MGT "O3'" "HO3'" SING N N 28
MGT "C2'" "O2'" SING N N 29
MGT "C2'" "C1'" SING N N 30
MGT "C2'" "H2'" SING N N 31
MGT "O2'" "HO2'" SING N N 32
MGT "C1'" N9 SING N N 33
MGT "C1'" "H1'" SING N N 34
MGT N9 C8 SING N N 35
MGT N9 C4 SING N N 36
MGT C8 N7 SING N N 37
MGT C8 H81 SING N N 38
MGT C8 H82 SING N N 39
MGT N7 CM7 SING N N 40
MGT N7 C5 SING N N 41
MGT CM7 HM71 SING N N 42
MGT CM7 HM72 SING N N 43
MGT CM7 HM73 SING N N 44
MGT C5 C6 SING N N 45
MGT C5 C4 DOUB N N 46
MGT C6 O6 DOUB N N 47
MGT C6 N1 SING N N 48
MGT N1 C2 SING N N 49
MGT N1 HN1 SING N N 50
MGT C2 N2 SING N N 51
MGT C2 N3 DOUB N N 52
MGT N2 HN21 SING N N 53
MGT N2 HN22 SING N N 54
MGT N3 C4 SING N N 55
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
MGT SMILES ACDLabs 10.04 O=P(O)(O)OP(=O)(O)OP(=O)(O)OCC3OC(N1C=2N=C(N)NC(=O)C=2N(C1)C)C(O)C3O
MGT SMILES_CANONICAL CACTVS 3.341 CN1CN([C@@H]2O[C@H](CO[P@@](O)(=O)O[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]2O)C3=C1C(=O)NC(=N3)N
MGT SMILES CACTVS 3.341 CN1CN([CH]2O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]2O)C3=C1C(=O)NC(=N3)N
MGT SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 CN1CN(C2=C1C(=O)NC(=N2)N)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)O[P@](=O)(O)OP(=O)(O)O)O)O
MGT SMILES "OpenEye OEToolkits" 1.5.0 CN1CN(C2=C1C(=O)NC(=N2)N)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O
MGT InChI InChI 1.03 InChI=1S/C11H20N5O14P3/c1-15-3-16(8-5(15)9(19)14-11(12)13-8)10-7(18)6(17)4(28-10)2-27-32(23,24)30-33(25,26)29-31(20,21)22/h4,6-7,10,17-18H,2-3H2,1H3,(H,23,24)(H,25,26)(H2,20,21,22)(H3,12,13,14,19)/t4-,6-,7-,10-/m1/s1
MGT InChIKey InChI 1.03 BUJQMJUTTBGELS-KQYNXXCUSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
MGT "SYSTEMATIC NAME" ACDLabs 10.04 "7-methylguanosine 5'-(tetrahydrogen triphosphate)"
MGT "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[[(2R,3S,4R,5R)-5-(2-amino-7-methyl-6-oxo-1,8-dihydropurin-9-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl] phosphono hydrogen phosphate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
MGT 'Create component' 1999-07-08 RCSB
MGT 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id MGT
_pdbe_chem_comp_drugbank_details.drugbank_id DB03358
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name "7-Methyl-7,8-dihydroguanosine 5'-(tetrahydrogen triphosphate)"
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number ?
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_synonyms.comp_id MGT
_pdbe_chem_comp_synonyms.name "7-Methyl-7,8-dihydroguanosine 5'-(tetrahydrogen triphosphate)"
_pdbe_chem_comp_synonyms.provenance DrugBank
_pdbe_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_drugbank_classification.comp_id MGT
_pdbe_chem_comp_drugbank_classification.drugbank_id DB03358
_pdbe_chem_comp_drugbank_classification.parent 'Purine ribonucleoside triphosphates'
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Purine nucleotides'
_pdbe_chem_comp_drugbank_classification.superclass 'Nucleosides, nucleotides, and analogues'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as purine ribonucleoside triphosphates. These are purine ribobucleotides with a triphosphate group  linked to the ribose moiety.'
#
_pdbe_chem_comp_drugbank_targets.comp_id MGT
_pdbe_chem_comp_drugbank_targets.drugbank_id DB03358
_pdbe_chem_comp_drugbank_targets.name "Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase"
_pdbe_chem_comp_drugbank_targets.organism VACV
_pdbe_chem_comp_drugbank_targets.uniprot_id P07617
_pdbe_chem_comp_drugbank_targets.pharmacologically_active unknown
_pdbe_chem_comp_drugbank_targets.ordinal 1
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
MGT PG P 19.986 3.710 1
MGT O1G O 21.201 4.589 2
MGT O2G O 20.865 2.495 3
MGT O3G O 19.106 4.925 4
MGT O3B O 18.771 2.830 5
MGT PB P 17.401 3.442 6
MGT O1B O 18.014 4.812 7
MGT O2B O 16.789 2.073 8
MGT O3A O 16.032 4.055 9
MGT PA P 14.817 3.175 10
MGT O1A O 15.697 1.960 11
MGT O2A O 13.938 4.391 12
MGT "O5'" O 13.602 2.296 13
MGT "C5'" C 12.233 2.908 14
MGT "C4'" C 11.018 2.029 15
MGT "O4'" O 11.015 0.529 16
MGT "C3'" C 9.592 2.495 17
MGT "O3'" O 9.131 3.922 18
MGT "C2'" C 8.708 1.283 19
MGT "O2'" O 7.208 1.285 20
MGT "C1'" C 9.588 0.068 21
MGT N9 N 9.122 -1.358 22
MGT C8 C 9.997 -2.565 23
MGT N7 N 9.122 -3.772 24
MGT CM7 C 9.588 -5.198 25
MGT C5 C 7.702 -3.315 26
MGT C6 C 6.404 -4.065 27
MGT O6 O 6.404 -5.565 28
MGT N1 N 5.104 -3.315 29
MGT C2 C 5.104 -1.815 30
MGT N2 N 3.805 -1.065 31
MGT N3 N 6.404 -1.065 32
MGT C4 C 7.702 -1.815 33
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
MGT PG O1G DOUBLE NONE 1
MGT PG O2G SINGLE NONE 2
MGT PG O3G SINGLE NONE 3
MGT PG O3B SINGLE NONE 4
MGT O3B PB SINGLE NONE 5
MGT PB O1B DOUBLE NONE 6
MGT PB O2B SINGLE BEGINDASH 7
MGT PB O3A SINGLE NONE 8
MGT O3A PA SINGLE NONE 9
MGT PA O1A DOUBLE NONE 10
MGT PA O2A SINGLE BEGINWEDGE 11
MGT PA "O5'" SINGLE NONE 12
MGT "O5'" "C5'" SINGLE NONE 13
MGT "C4'" "C5'" SINGLE BEGINWEDGE 14
MGT "C4'" "O4'" SINGLE NONE 15
MGT "C4'" "C3'" SINGLE NONE 16
MGT "O4'" "C1'" SINGLE NONE 17
MGT "C3'" "O3'" SINGLE BEGINDASH 18
MGT "C3'" "C2'" SINGLE NONE 19
MGT "C2'" "O2'" SINGLE BEGINDASH 20
MGT "C2'" "C1'" SINGLE NONE 21
MGT "C1'" N9 SINGLE BEGINWEDGE 22
MGT N9 C8 SINGLE NONE 23
MGT N9 C4 SINGLE NONE 24
MGT C8 N7 SINGLE NONE 25
MGT N7 CM7 SINGLE NONE 26
MGT N7 C5 SINGLE NONE 27
MGT C5 C6 SINGLE NONE 28
MGT C5 C4 DOUBLE NONE 29
MGT C6 O6 DOUBLE NONE 30
MGT C6 N1 SINGLE NONE 31
MGT N1 C2 SINGLE NONE 32
MGT C2 N2 SINGLE NONE 33
MGT C2 N3 DOUBLE NONE 34
MGT N3 C4 SINGLE NONE 35
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
MGT MurckoScaffold S1 scaffold 'O=c1[nH]cnc2c1NCN2[C@H]1CCCO1' InChI=1S/C9H12N4O2/c14-9-7-8(10-4-11-9)13(5-12-7)6-2-1-3-15-6/h4,6,12H,1-3,5H2,(H,10,11,14)/t6-/m1/s1 OIJBALQIYQGIQC-ZCFIWIBFSA-N
MGT phosphate F1 fragment O=P(O)(O)O InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4) NBIIXXVUZAFLBC-UHFFFAOYSA-N
MGT pyrimidine F2 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
MGT ribose F3 fragment OCC1OCC(O)C1O InChI=1S/C5H10O4/c6-1-4-5(8)3(7)2-9-4/h3-8H,1-2H2 KZVAAIRBJJYZOW-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
MGT "C4'" S1 1
MGT "O4'" S1 1
MGT "C3'" S1 1
MGT "C2'" S1 1
MGT "C1'" S1 1
MGT N9 S1 1
MGT C8 S1 1
MGT N7 S1 1
MGT C5 S1 1
MGT C6 S1 1
MGT O6 S1 1
MGT N1 S1 1
MGT C2 S1 1
MGT N3 S1 1
MGT C4 S1 1
MGT O2G F1 1
MGT PG F1 1
MGT O1G F1 1
MGT O3G F1 1
MGT O3B F1 1
MGT O3B F1 2
MGT PB F1 2
MGT O1B F1 2
MGT O2B F1 2
MGT O3A F1 2
MGT O3A F1 3
MGT PA F1 3
MGT O1A F1 3
MGT O2A F1 3
MGT "O5'" F1 3
MGT C5 F2 1
MGT C6 F2 1
MGT N1 F2 1
MGT C2 F2 1
MGT N3 F2 1
MGT C4 F2 1
MGT "C2'" F3 1
MGT "C3'" F3 1
MGT "C4'" F3 1
MGT "O4'" F3 1
MGT "C1'" F3 1
MGT "C5'" F3 1
MGT "O5'" F3 1
MGT "O3'" F3 1
MGT "O2'" F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id MGT
_pdbe_chem_comp_rdkit_properties.exactmw 539.022
_pdbe_chem_comp_rdkit_properties.amw 539.224
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 19
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 9
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 16
_pdbe_chem_comp_rdkit_properties.NumHBD 8
_pdbe_chem_comp_rdkit_properties.NumHBA 18
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 33
_pdbe_chem_comp_rdkit_properties.NumAtoms 53
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 22
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.636
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 6
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 212.097
_pdbe_chem_comp_rdkit_properties.tpsa 287.760
_pdbe_chem_comp_rdkit_properties.CrippenClogP -2.886
_pdbe_chem_comp_rdkit_properties.CrippenMR 103.146
_pdbe_chem_comp_rdkit_properties.chi0v 17.476
_pdbe_chem_comp_rdkit_properties.chi1v 11.757
_pdbe_chem_comp_rdkit_properties.chi2v 6.631
_pdbe_chem_comp_rdkit_properties.chi3v 6.631
_pdbe_chem_comp_rdkit_properties.chi4v 4.756
_pdbe_chem_comp_rdkit_properties.chi0n 34.793
_pdbe_chem_comp_rdkit_properties.chi1n 16.666
_pdbe_chem_comp_rdkit_properties.chi2n 3.116
_pdbe_chem_comp_rdkit_properties.chi3n 3.116
_pdbe_chem_comp_rdkit_properties.chi4n 2.080
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.430
_pdbe_chem_comp_rdkit_properties.kappa1 10.281
_pdbe_chem_comp_rdkit_properties.kappa2 8.976
_pdbe_chem_comp_rdkit_properties.kappa3 5.985
_pdbe_chem_comp_rdkit_properties.Phi 2.796
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
MGT UniChem ChEMBL CHEMBL1234306
MGT UniChem BRENDA 183050
MGT UniChem SureChEMBL 994178
MGT UniChem PubChem 135486126
MGT UniChem 'Probes And Drugs' PD059671
MGT UniChem DrugBank DB03358
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
MGT PG 5.312 -2.406 3.222 ETKDGv3 1
MGT O1G 6.778 -2.328 2.854 ETKDGv3 2
MGT O2G 4.930 -4.011 3.596 ETKDGv3 3
MGT O3G 5.015 -1.450 4.587 ETKDGv3 4
MGT O3B 4.332 -1.906 1.921 ETKDGv3 5
MGT PB 4.783 -0.317 1.497 ETKDGv3 6
MGT O1B 4.686 0.590 2.703 ETKDGv3 7
MGT O2B 6.374 -0.273 0.910 ETKDGv3 8
MGT O3A 3.700 0.273 0.323 ETKDGv3 9
MGT PA 3.982 -0.574 -1.128 ETKDGv3 10
MGT O1A 5.233 -0.038 -1.786 ETKDGv3 11
MGT O2A 4.162 -2.238 -0.855 ETKDGv3 12
MGT "O5'" 2.667 -0.315 -2.181 ETKDGv3 13
MGT "C5'" 1.512 -0.857 -1.585 ETKDGv3 14
MGT "C4'" 0.293 -0.556 -2.462 ETKDGv3 15
MGT "O4'" -0.855 -1.152 -1.897 ETKDGv3 16
MGT "C3'" 0.046 0.942 -2.615 ETKDGv3 17
MGT "O3'" 0.704 1.451 -3.746 ETKDGv3 18
MGT "C2'" -1.457 1.014 -2.744 ETKDGv3 19
MGT "O2'" -1.880 0.969 -4.088 ETKDGv3 20
MGT "C1'" -1.921 -0.225 -1.974 ETKDGv3 21
MGT N9 -2.353 0.145 -0.624 ETKDGv3 22
MGT C8 -1.664 -0.149 0.639 ETKDGv3 23
MGT N7 -2.544 0.405 1.671 ETKDGv3 24
MGT CM7 -2.301 0.377 3.107 ETKDGv3 25
MGT C5 -3.666 0.973 1.005 ETKDGv3 26
MGT C6 -4.837 1.648 1.564 ETKDGv3 27
MGT O6 -4.984 1.814 2.803 ETKDGv3 28
MGT N1 -5.822 2.118 0.631 ETKDGv3 29
MGT C2 -5.619 1.907 -0.785 ETKDGv3 30
MGT N2 -6.591 2.370 -1.720 ETKDGv3 31
MGT N3 -4.547 1.294 -1.214 ETKDGv3 32
MGT C4 -3.556 0.822 -0.288 ETKDGv3 33
MGT HOG2 5.042 -4.503 2.743 ETKDGv3 34
MGT HOG3 5.573 -1.849 5.302 ETKDGv3 35
MGT HOB2 6.503 -1.137 0.444 ETKDGv3 36
MGT HOA2 4.281 -2.630 -1.757 ETKDGv3 37
MGT "H5'1" 1.607 -1.963 -1.497 ETKDGv3 38
MGT "H5'2" 1.337 -0.426 -0.572 ETKDGv3 39
MGT "H4'" 0.459 -1.013 -3.464 ETKDGv3 40
MGT "H3'" 0.366 1.489 -1.696 ETKDGv3 41
MGT "HO3'" 0.621 2.439 -3.697 ETKDGv3 42
MGT "H2'" -1.837 1.955 -2.289 ETKDGv3 43
MGT "HO2'" -1.562 0.117 -4.488 ETKDGv3 44
MGT "H1'" -2.774 -0.711 -2.495 ETKDGv3 45
MGT H81 -1.556 -1.246 0.774 ETKDGv3 46
MGT H82 -0.677 0.357 0.665 ETKDGv3 47
MGT HM71 -2.253 1.415 3.498 ETKDGv3 48
MGT HM72 -1.338 -0.132 3.322 ETKDGv3 49
MGT HM73 -3.120 -0.174 3.614 ETKDGv3 50
MGT HN1 -6.678 2.608 0.976 ETKDGv3 51
MGT HN21 -6.453 2.223 -2.745 ETKDGv3 52
MGT HN22 -7.451 2.861 -1.390 ETKDGv3 53
#