data_LQD
#
_chem_comp.id LQD
_chem_comp.name (3R,4S)-1-[(2-methoxyphenyl)methyl]-N,N-dimethyl-4-(1-methylindol-3-yl)pyrrolidin-3-amine
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C23 H29 N3 O"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2016-10-17
_chem_comp.pdbx_modified_date 2017-01-20
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 363.496
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code LQD
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5H15
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
LQD C1 C1 C 0 1 Y N N N N N 32.653 14.235 33.937 2.137 0.334 0.143 C1 LQD 1
LQD C2 C2 C 0 1 N N S N N N 32.316 15.719 34.081 0.919 -0.366 0.688 C2 LQD 2
LQD C3 C3 C 0 1 Y N N N N N 33.853 13.647 34.114 2.148 1.369 -0.712 C3 LQD 3
LQD C11 C4 C 0 1 N N N N N N 30.298 17.121 34.226 -1.373 -0.705 -0.016 C11 LQD 4
LQD C12 C5 C 0 1 N N N N N N 30.033 17.678 31.735 -2.434 0.855 1.523 C12 LQD 5
LQD C14 C6 C 0 1 Y N N N N N 27.955 16.553 30.679 -4.344 -0.107 0.215 C14 LQD 6
LQD C15 C7 C 0 1 N N N N N N 34.904 11.419 33.993 3.832 2.832 -1.872 C15 LQD 7
LQD C16 C8 C 0 1 Y N N N N N 30.356 13.063 33.137 4.158 -0.935 1.258 C16 LQD 8
LQD C18 C9 C 0 1 Y N N N N N 32.017 10.723 33.173 5.698 0.869 -0.202 C18 LQD 9
LQD C19 C10 C 0 1 Y N N N N N 27.667 18.415 32.244 -4.197 2.273 0.455 C19 LQD 10
LQD C20 C11 C 0 1 N N N N N N 30.575 17.251 37.152 -0.451 -2.991 -1.686 C20 LQD 11
LQD C21 C12 C 0 1 N N N N N N 31.805 15.171 37.285 1.770 -2.682 -0.773 C21 LQD 12
LQD C22 C13 C 0 1 Y N N N N N 26.543 16.497 30.544 -5.503 0.042 -0.534 C22 LQD 13
LQD C23 C14 C 0 1 N N N N N N 28.392 14.513 29.239 -4.576 -2.456 -0.072 C23 LQD 14
LQD C24 C15 C 0 1 Y N N N N N 29.842 11.789 32.799 5.522 -0.977 1.327 C24 LQD 15
LQD C25 C16 C 0 1 Y N N N N N 30.659 10.635 32.809 6.293 -0.079 0.601 C25 LQD 16
LQD C26 C17 C 0 1 Y N N N N N 26.270 18.333 32.123 -5.352 2.419 -0.292 C26 LQD 17
LQD C27 C18 C 0 1 Y N N N N N 25.703 17.377 31.256 -6.004 1.304 -0.786 C27 LQD 18
LQD N4 N1 N 0 1 Y N N N N N 33.774 12.355 33.888 3.438 1.738 -0.980 N4 LQD 19
LQD C5 C19 C 0 1 Y N N N N N 31.708 13.129 33.512 3.534 0.018 0.451 C5 LQD 20
LQD N6 N2 N 0 1 N N N N N N 30.504 16.765 32.811 -1.293 0.633 0.624 N6 LQD 21
LQD C7 C20 C 0 1 N N R N N N 31.094 16.022 34.997 0.086 -0.970 -0.466 C7 LQD 22
LQD C8 C21 C 0 1 Y N N N N N 32.521 11.995 33.529 4.310 0.930 -0.287 C8 LQD 23
LQD C9 C22 C 0 1 N N N N N N 31.923 16.369 32.726 -0.018 0.646 1.373 C9 LQD 24
LQD C10 C23 C 0 1 Y N N N N N 28.512 17.536 31.534 -3.692 1.013 0.709 C10 LQD 25
LQD N13 N3 N 0 1 N N N N N N 31.478 16.333 36.417 0.338 -2.411 -0.591 N13 LQD 26
LQD O17 O1 O 0 1 N N N N N N 28.817 15.704 29.950 -3.852 -1.348 0.469 O17 LQD 27
LQD H1 H1 H 0 1 N N N N N N 33.194 16.247 34.482 1.213 -1.146 1.390 H1 LQD 28
LQD H2 H2 H 0 1 N N N N N N 34.755 14.166 34.402 1.269 1.840 -1.127 H2 LQD 29
LQD H3 H3 H 0 1 N N N N N N 30.700 18.122 34.442 -1.696 -1.457 0.703 H3 LQD 30
LQD H4 H4 H 0 1 N N N N N N 29.230 17.090 34.488 -2.043 -0.683 -0.876 H4 LQD 31
LQD H5 H5 H 0 1 N N N N N N 30.547 17.426 30.796 -2.539 0.002 2.194 H5 LQD 32
LQD H6 H6 H 0 1 N N N N N N 30.266 18.716 32.014 -2.264 1.758 2.109 H6 LQD 33
LQD H7 H7 H 0 1 N N N N N N 35.807 11.966 34.302 3.906 3.757 -1.301 H7 LQD 34
LQD H8 H8 H 0 1 N N N N N N 34.671 10.646 34.740 4.798 2.604 -2.322 H8 LQD 35
LQD H9 H9 H 0 1 N N N N N N 35.079 10.945 33.016 3.084 2.949 -2.656 H9 LQD 36
LQD H10 H10 H 0 1 N N N N N N 29.736 13.947 33.108 3.565 -1.637 1.826 H10 LQD 37
LQD H11 H11 H 0 1 N N N N N N 32.651 9.849 33.180 6.306 1.563 -0.763 H11 LQD 38
LQD H12 H12 H 0 1 N N N N N N 28.101 19.163 32.891 -3.689 3.146 0.839 H12 LQD 39
LQD H13 H13 H 0 1 N N N N N N 30.956 17.402 38.173 -0.181 -2.507 -2.624 H13 LQD 40
LQD H14 H14 H 0 1 N N N N N N 30.532 18.218 36.630 -0.245 -4.059 -1.756 H14 LQD 41
LQD H15 H15 H 0 1 N N N N N N 29.567 16.814 37.199 -1.512 -2.837 -1.490 H15 LQD 42
LQD H16 H16 H 0 1 N N N N N N 32.068 15.527 38.292 2.323 -2.303 0.086 H16 LQD 43
LQD H17 H17 H 0 1 N N N N N N 30.933 14.504 37.349 1.929 -3.756 -0.862 H17 LQD 44
LQD H18 H18 H 0 1 N N N N N N 32.656 14.622 36.857 2.121 -2.186 -1.678 H18 LQD 45
LQD H19 H19 H 0 1 N N N N N N 26.103 15.765 29.882 -6.012 -0.829 -0.920 H19 LQD 46
LQD H20 H20 H 0 1 N N N N N N 29.262 14.041 28.759 -5.591 -2.456 0.326 H20 LQD 47
LQD H21 H21 H 0 1 N N N N N N 27.936 13.806 29.948 -4.612 -2.371 -1.158 H21 LQD 48
LQD H22 H22 H 0 1 N N N N N N 27.655 14.788 28.471 -4.077 -3.385 0.204 H22 LQD 49
LQD H23 H23 H 0 1 N N N N N N 28.801 11.696 32.527 6.004 -1.714 1.951 H23 LQD 50
LQD H24 H24 H 0 1 N N N N N N 30.239 9.679 32.535 7.370 -0.125 0.665 H24 LQD 51
LQD H25 H25 H 0 1 N N N N N N 25.635 18.997 32.690 -5.745 3.405 -0.490 H25 LQD 52
LQD H26 H26 H 0 1 N N N N N N 24.631 17.319 31.138 -6.905 1.421 -1.369 H26 LQD 53
LQD H28 H28 H 0 1 N N N N N N 30.467 15.118 35.010 0.299 -0.457 -1.405 H28 LQD 54
LQD H29 H29 H 0 1 N N N N N N 32.061 15.645 31.909 -0.191 0.350 2.408 H29 LQD 55
LQD H30 H30 H 0 1 N N N N N N 32.548 17.255 32.540 0.423 1.643 1.338 H30 LQD 56
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
LQD C23 O17 SING N N 1
LQD O17 C14 SING N N 2
LQD C22 C14 SING Y N 3
LQD C22 C27 DOUB Y N 4
LQD C14 C10 DOUB Y N 5
LQD C27 C26 SING Y N 6
LQD C10 C12 SING N N 7
LQD C10 C19 SING Y N 8
LQD C12 N6 SING N N 9
LQD C26 C19 DOUB Y N 10
LQD C9 N6 SING N N 11
LQD C9 C2 SING N N 12
LQD C24 C25 SING Y N 13
LQD C24 C16 DOUB Y N 14
LQD C25 C18 DOUB Y N 15
LQD N6 C11 SING N N 16
LQD C16 C5 SING Y N 17
LQD C18 C8 SING Y N 18
LQD C5 C8 DOUB Y N 19
LQD C5 C1 SING Y N 20
LQD C8 N4 SING Y N 21
LQD N4 C15 SING N N 22
LQD N4 C3 SING Y N 23
LQD C1 C2 SING N N 24
LQD C1 C3 DOUB Y N 25
LQD C2 C7 SING N N 26
LQD C11 C7 SING N N 27
LQD C7 N13 SING N N 28
LQD N13 C20 SING N N 29
LQD N13 C21 SING N N 30
LQD C2 H1 SING N N 31
LQD C3 H2 SING N N 32
LQD C11 H3 SING N N 33
LQD C11 H4 SING N N 34
LQD C12 H5 SING N N 35
LQD C12 H6 SING N N 36
LQD C15 H7 SING N N 37
LQD C15 H8 SING N N 38
LQD C15 H9 SING N N 39
LQD C16 H10 SING N N 40
LQD C18 H11 SING N N 41
LQD C19 H12 SING N N 42
LQD C20 H13 SING N N 43
LQD C20 H14 SING N N 44
LQD C20 H15 SING N N 45
LQD C21 H16 SING N N 46
LQD C21 H17 SING N N 47
LQD C21 H18 SING N N 48
LQD C22 H19 SING N N 49
LQD C23 H20 SING N N 50
LQD C23 H21 SING N N 51
LQD C23 H22 SING N N 52
LQD C24 H23 SING N N 53
LQD C25 H24 SING N N 54
LQD C26 H25 SING N N 55
LQD C27 H26 SING N N 56
LQD C7 H28 SING N N 57
LQD C9 H29 SING N N 58
LQD C9 H30 SING N N 59
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
LQD InChI InChI 1.03 InChI=1S/C23H29N3O/c1-24(2)22-16-26(13-17-9-5-8-12-23(17)27-4)15-20(22)19-14-25(3)21-11-7-6-10-18(19)21/h5-12,14,20,22H,13,15-16H2,1-4H3/t20-,22+/m1/s1
LQD InChIKey InChI 1.03 CXQQECCQTKSQKN-IRLDBZIGSA-N
LQD SMILES_CANONICAL CACTVS 3.385 COc1ccccc1CN2C[C@@H]([C@H](C2)c3cn(C)c4ccccc34)N(C)C
LQD SMILES CACTVS 3.385 COc1ccccc1CN2C[CH]([CH](C2)c3cn(C)c4ccccc34)N(C)C
LQD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 Cn1cc(c2c1cccc2)[C@H]3CN(C[C@@H]3N(C)C)Cc4ccccc4OC
LQD SMILES "OpenEye OEToolkits" 2.0.6 Cn1cc(c2c1cccc2)C3CN(CC3N(C)C)Cc4ccccc4OC
#
_pdbx_chem_comp_identifier.comp_id LQD
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.6
_pdbx_chem_comp_identifier.identifier
(3~{R},4~{S})-1-[(2-methoxyphenyl)methyl]-~{N},~{N}-dimethyl-4-(1-methylindol-3-yl)pyrrolidin-3-amine
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
LQD 'Create component' 2016-10-17 PDBJ
LQD 'Initial release' 2017-01-25 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
LQD C1 C 7.018 -2.547 1
LQD C2 C 7.483 -1.121 2
LQD C3 C 7.893 -3.754 3
LQD C11 C 8.913 0.840 4
LQD C12 C 7.027 2.733 5
LQD C14 C 9.499 3.532 6
LQD C15 C 7.483 -6.387 7
LQD C16 C 4.299 -2.254 8
LQD C18 C 4.299 -5.254 9
LQD C19 C 7.571 5.274 10
LQD C20 C 11.494 -0.936 11
LQD C21 C 9.963 -3.035 12
LQD C22 C 10.505 4.645 13
LQD C23 C 11.427 1.790 14
LQD C24 C 3.000 -3.004 15
LQD C25 C 3.000 -4.504 16
LQD C26 C 8.577 6.387 17
LQD C27 C 10.043 6.072 18
LQD N4 N 7.018 -4.961 19
LQD C5 C 5.598 -3.004 20
LQD N6 N 7.487 1.306 21
LQD C7 C 8.911 -0.660 22
LQD C8 C 5.598 -4.504 23
LQD C9 C 6.604 0.094 24
LQD C10 C 8.032 3.846 25
LQD N13 N 10.123 -1.544 26
LQD O17 O 9.960 2.105 27
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
LQD C23 O17 SINGLE NONE 1
LQD O17 C14 SINGLE NONE 2
LQD C22 C14 DOUBLE NONE 3
LQD C22 C27 SINGLE NONE 4
LQD C14 C10 SINGLE NONE 5
LQD C27 C26 DOUBLE NONE 6
LQD C10 C12 SINGLE NONE 7
LQD C10 C19 DOUBLE NONE 8
LQD C12 N6 SINGLE NONE 9
LQD C26 C19 SINGLE NONE 10
LQD C9 N6 SINGLE NONE 11
LQD C9 C2 SINGLE NONE 12
LQD C24 C25 DOUBLE NONE 13
LQD C24 C16 SINGLE NONE 14
LQD C25 C18 SINGLE NONE 15
LQD N6 C11 SINGLE NONE 16
LQD C16 C5 DOUBLE NONE 17
LQD C18 C8 DOUBLE NONE 18
LQD C5 C8 SINGLE NONE 19
LQD C5 C1 SINGLE NONE 20
LQD C8 N4 SINGLE NONE 21
LQD N4 C15 SINGLE NONE 22
LQD N4 C3 SINGLE NONE 23
LQD C2 C1 SINGLE BEGINWEDGE 24
LQD C1 C3 DOUBLE NONE 25
LQD C2 C7 SINGLE NONE 26
LQD C11 C7 SINGLE NONE 27
LQD C7 N13 SINGLE BEGINDASH 28
LQD N13 C20 SINGLE NONE 29
LQD N13 C21 SINGLE NONE 30
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
LQD MurckoScaffold S1 scaffold 'c1ccc(CN2CC[C@@H](c3c[nH]c4ccccc34)C2)cc1' InChI=1S/C19H20N2/c1-2-6-15(7-3-1)13-21-11-10-16(14-21)18-12-20-19-9-5-4-8-17(18)19/h1-9,12,16,20H,10-11,13-14H2/t16-/m1/s1 DEUIOKBKJUOVFD-MRXNPFEDSA-N
LQD indole F1 fragment 'c1ccc2[nH]ccc2c1' InChI=1S/C8H7N/c1-2-4-8-7(3-1)5-6-9-8/h1-6,9H SIKJAQJRHWYJAI-UHFFFAOYSA-N
LQD phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
LQD pyrrole F3 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
LQD C1 S1 1
LQD C2 S1 1
LQD C3 S1 1
LQD C11 S1 1
LQD C12 S1 1
LQD C14 S1 1
LQD C16 S1 1
LQD C18 S1 1
LQD C19 S1 1
LQD C22 S1 1
LQD C24 S1 1
LQD C25 S1 1
LQD C26 S1 1
LQD C27 S1 1
LQD N4 S1 1
LQD C5 S1 1
LQD N6 S1 1
LQD C7 S1 1
LQD C8 S1 1
LQD C9 S1 1
LQD C10 S1 1
LQD C8 F1 1
LQD C5 F1 1
LQD C1 F1 1
LQD C3 F1 1
LQD N4 F1 1
LQD C16 F1 1
LQD C24 F1 1
LQD C25 F1 1
LQD C18 F1 1
LQD C14 F2 1
LQD C22 F2 1
LQD C27 F2 1
LQD C26 F2 1
LQD C19 F2 1
LQD C10 F2 1
LQD C16 F2 2
LQD C24 F2 2
LQD C25 F2 2
LQD C18 F2 2
LQD C8 F2 2
LQD C5 F2 2
LQD C3 F3 1
LQD C1 F3 1
LQD C5 F3 1
LQD C8 F3 1
LQD N4 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id LQD
_pdbe_chem_comp_rdkit_properties.exactmw 363.231
_pdbe_chem_comp_rdkit_properties.amw 363.505
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 4
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 0
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 9
_pdbe_chem_comp_rdkit_properties.NumHBD 0
_pdbe_chem_comp_rdkit_properties.NumHBA 4
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 27
_pdbe_chem_comp_rdkit_properties.NumAtoms 56
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 4
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.391
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 202.245
_pdbe_chem_comp_rdkit_properties.tpsa 20.640
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.716
_pdbe_chem_comp_rdkit_properties.CrippenMR 108.058
_pdbe_chem_comp_rdkit_properties.chi0v 13.250
_pdbe_chem_comp_rdkit_properties.chi1v 7.171
_pdbe_chem_comp_rdkit_properties.chi2v 3.495
_pdbe_chem_comp_rdkit_properties.chi3v 3.495
_pdbe_chem_comp_rdkit_properties.chi4v 2.374
_pdbe_chem_comp_rdkit_properties.chi0n 42.250
_pdbe_chem_comp_rdkit_properties.chi1n 21.671
_pdbe_chem_comp_rdkit_properties.chi2n 3.495
_pdbe_chem_comp_rdkit_properties.chi3n 3.495
_pdbe_chem_comp_rdkit_properties.chi4n 2.374
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.300
_pdbe_chem_comp_rdkit_properties.kappa1 4.315
_pdbe_chem_comp_rdkit_properties.kappa2 7.372
_pdbe_chem_comp_rdkit_properties.kappa3 3.352
_pdbe_chem_comp_rdkit_properties.Phi 1.178
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
LQD UniChem ZINC ZINC000584905614
LQD UniChem PubChem 124037093
LQD UniChem BindingDb 223984
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
LQD C1 -2.016 0.318 -0.216 ETKDGv3 1
LQD C2 -1.118 -0.098 -1.363 ETKDGv3 2
LQD C3 -3.163 0.999 -0.361 ETKDGv3 3
LQD C11 0.664 -1.766 -1.425 ETKDGv3 4
LQD C12 2.587 -0.276 -1.276 ETKDGv3 5
LQD C14 3.322 0.758 0.988 ETKDGv3 6
LQD C15 -4.809 2.321 1.095 ETKDGv3 7
LQD C16 -0.790 -0.415 1.922 ETKDGv3 8
LQD C18 -2.991 0.873 3.208 ETKDGv3 9
LQD C19 3.527 2.012 -1.110 ETKDGv3 10
LQD C20 -1.686 -3.739 -2.287 ETKDGv3 11
LQD C21 -1.073 -2.011 -3.866 ETKDGv3 12
LQD C22 3.824 1.800 1.683 ETKDGv3 13
LQD C23 2.972 -0.678 3.015 ETKDGv3 14
LQD C24 -0.869 -0.362 3.406 ETKDGv3 15
LQD C25 -1.908 0.250 4.014 ETKDGv3 16
LQD C26 4.076 3.142 -0.337 ETKDGv3 17
LQD C27 4.217 3.041 0.988 ETKDGv3 18
LQD N4 -3.787 1.302 0.894 ETKDGv3 19
LQD C5 -1.782 0.151 1.225 ETKDGv3 20
LQD N6 1.199 -0.530 -0.850 ETKDGv3 21
LQD C7 -0.864 -1.617 -1.396 ETKDGv3 22
LQD C8 -2.895 0.794 1.876 ETKDGv3 23
LQD C9 0.274 0.533 -1.260 ETKDGv3 24
LQD C10 3.172 0.872 -0.490 ETKDGv3 25
LQD N13 -1.590 -2.288 -2.510 ETKDGv3 26
LQD O17 2.928 -0.439 1.612 ETKDGv3 27
LQD H1 -1.591 0.245 -2.309 ETKDGv3 28
LQD H2 -3.566 1.314 -1.315 ETKDGv3 29
LQD H3 1.056 -1.917 -2.452 ETKDGv3 30
LQD H4 0.978 -2.633 -0.805 ETKDGv3 31
LQD H5 3.209 -1.175 -1.071 ETKDGv3 32
LQD H6 2.640 -0.091 -2.374 ETKDGv3 33
LQD H7 -5.470 2.375 0.204 ETKDGv3 34
LQD H8 -4.325 3.308 1.252 ETKDGv3 35
LQD H9 -5.430 2.068 1.979 ETKDGv3 36
LQD H10 0.044 -0.898 1.438 ETKDGv3 37
LQD H11 -3.826 1.364 3.688 ETKDGv3 38
LQD H12 3.411 2.121 -2.182 ETKDGv3 39
LQD H13 -2.262 -4.218 -3.109 ETKDGv3 40
LQD H14 -0.677 -4.203 -2.234 ETKDGv3 41
LQD H15 -2.232 -3.946 -1.342 ETKDGv3 42
LQD H16 -0.240 -2.696 -4.139 ETKDGv3 43
LQD H17 -1.891 -2.155 -4.603 ETKDGv3 44
LQD H18 -0.714 -0.966 -3.970 ETKDGv3 45
LQD H19 3.949 1.754 2.756 ETKDGv3 46
LQD H20 2.573 -1.692 3.221 ETKDGv3 47
LQD H21 4.019 -0.626 3.379 ETKDGv3 48
LQD H22 2.343 0.066 3.549 ETKDGv3 49
LQD H23 -0.087 -0.817 4.000 ETKDGv3 50
LQD H24 -1.957 0.287 5.095 ETKDGv3 51
LQD H25 4.362 4.054 -0.846 ETKDGv3 52
LQD H26 4.619 3.871 1.555 ETKDGv3 53
LQD H28 -1.212 -2.052 -0.431 ETKDGv3 54
LQD H29 0.303 1.366 -0.523 ETKDGv3 55
LQD H30 0.555 0.946 -2.257 ETKDGv3 56
#