data_KJS
#
_chem_comp.id KJS
_chem_comp.name
5-(3,5-dimethyl-1,2-oxazol-4-yl)-1-[2-(morpholin-4-yl)ethyl]-2-[2-(4-propoxyphenyl)ethyl]-1H-benzimidazole
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C29 H36 N4 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2018-12-19
_chem_comp.pdbx_modified_date 2019-01-18
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 488.621
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code KJS
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6NEZ
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
KJS C4 C1 C 0 1 Y N N N N N 30.208 -1.942 7.607 4.743 3.356 -0.569 C4 KJS 1
KJS C5 C2 C 0 1 Y N N N N N 29.423 -1.036 6.919 3.406 3.110 -0.325 C5 KJS 2
KJS C6 C3 C 0 1 Y N N N N N 28.935 0.100 7.541 3.020 1.937 0.297 C6 KJS 3
KJS N1 N1 N 0 1 Y N N N N N 25.256 1.008 8.461 -1.001 -0.444 0.232 N1 KJS 4
KJS C7 C4 C 0 1 N N N N N N 28.024 1.042 6.803 1.560 1.671 0.561 C7 KJS 5
KJS C8 C5 C 0 1 N N N N N N 26.676 0.408 6.475 0.950 0.938 -0.635 C8 KJS 6
KJS N2 N2 N 0 1 N N N N N N 24.219 4.260 6.887 0.721 -3.754 0.101 N2 KJS 7
KJS C9 C6 C 0 1 Y N N N N N 25.893 0.063 7.695 -0.510 0.672 -0.370 C9 KJS 8
KJS C10 C7 C 0 1 Y N N N N N 24.941 -1.017 9.284 -2.667 0.930 -0.306 C10 KJS 9
KJS C11 C8 C 0 1 Y N N N N N 24.420 -1.983 10.144 -3.994 1.354 -0.397 C11 KJS 10
KJS C12 C9 C 0 1 Y N N N N N 23.576 -1.576 11.179 -5.006 0.544 0.099 C12 KJS 11
KJS N3 N3 N 0 1 Y N N N N N 22.175 -4.484 12.924 -8.532 1.127 -0.518 N3 KJS 12
KJS C13 C10 C 0 1 Y N N N N N 23.282 -0.222 11.363 -4.699 -0.686 0.687 C13 KJS 13
KJS C14 C11 C 0 1 Y N N N N N 23.812 0.747 10.528 -3.402 -1.106 0.780 C14 KJS 14
KJS C15 C12 C 0 1 Y N N N N N 24.633 0.325 9.490 -2.375 -0.310 0.289 C15 KJS 15
KJS C26 C13 C 0 1 N N N N N N 21.830 -4.290 10.533 -7.394 -0.826 -1.617 C26 KJS 16
KJS C25 C14 C 0 1 Y N N N N N 22.343 -3.781 11.840 -7.478 0.398 -0.742 C25 KJS 17
KJS O2 O1 O 0 1 Y N N N N N 22.773 -3.732 13.979 -8.295 2.046 0.229 O2 KJS 18
KJS C23 C15 C 0 1 Y N N N N N 23.267 -2.595 13.458 -7.011 2.056 0.616 C23 KJS 19
KJS C24 C16 C 0 1 N N N N N N 23.903 -1.647 14.408 -6.353 3.047 1.541 C24 KJS 20
KJS C22 C17 C 0 1 Y N N N N N 23.031 -2.576 12.118 -6.420 0.987 0.005 C22 KJS 21
KJS N N4 N 0 1 Y N N N N N 25.735 -1.159 8.151 -1.483 1.476 -0.685 N KJS 22
KJS C16 C18 C 0 1 N N N N N N 25.189 2.458 8.272 -0.219 -1.581 0.725 C16 KJS 23
KJS C17 C19 C 0 1 N N N N N N 24.173 2.835 7.214 -0.063 -2.614 -0.392 C17 KJS 24
KJS C21 C20 C 0 1 N N N N N N 25.291 4.517 5.921 0.693 -4.868 -0.858 C21 KJS 25
KJS C20 C21 C 0 1 N N N N N N 25.339 5.984 5.577 1.471 -6.053 -0.278 C20 KJS 26
KJS O1 O2 O 0 1 N N N N N N 24.074 6.456 5.077 2.804 -5.637 0.030 O1 KJS 27
KJS C19 C22 C 0 1 N N N N N N 23.019 6.171 6.005 2.868 -4.554 0.962 C19 KJS 28
KJS C18 C23 C 0 1 N N N N N N 22.950 4.706 6.316 2.105 -3.354 0.395 C18 KJS 29
KJS C27 C24 C 0 1 Y N N N N N 29.363 0.380 8.832 3.970 1.007 0.675 C27 KJS 30
KJS C28 C25 C 0 1 Y N N N N N 30.184 -0.497 9.518 5.309 1.248 0.433 C28 KJS 31
KJS C3 C26 C 0 1 Y N N N N N 30.531 -1.704 8.933 5.699 2.425 -0.190 C3 KJS 32
KJS O O3 O 0 1 N N N N N N 31.204 -2.782 9.453 7.014 2.662 -0.435 O KJS 33
KJS C2 C27 C 0 1 N N N N N N 31.723 -2.716 10.786 7.943 1.659 -0.017 C2 KJS 34
KJS C1 C28 C 0 1 N N N N N N 33.017 -3.507 10.789 9.364 2.099 -0.375 C1 KJS 35
KJS C C29 C 0 1 N N N N N N 34.163 -2.821 10.017 10.358 1.025 0.073 C KJS 36
KJS H1 H1 H 0 1 N N N N N N 30.568 -2.832 7.113 5.044 4.271 -1.059 H1 KJS 37
KJS H2 H2 H 0 1 N N N N N N 29.187 -1.217 5.881 2.661 3.835 -0.620 H2 KJS 38
KJS H3 H3 H 0 1 N N N N N N 28.512 1.342 5.864 1.459 1.055 1.455 H3 KJS 39
KJS H4 H4 H 0 1 N N N N N N 27.854 1.931 7.428 1.040 2.617 0.712 H4 KJS 40
KJS H5 H5 H 0 1 N N N N N N 26.091 1.117 5.870 1.051 1.554 -1.528 H5 KJS 41
KJS H6 H6 H 0 1 N N N N N N 26.850 -0.511 5.897 1.470 -0.008 -0.785 H6 KJS 42
KJS H8 H8 H 0 1 N N N N N N 24.665 -3.027 10.012 -4.232 2.304 -0.851 H8 KJS 43
KJS H9 H9 H 0 1 N N N N N N 22.630 0.074 12.171 -5.492 -1.310 1.071 H9 KJS 44
KJS H10 H10 H 0 1 N N N N N N 23.595 1.794 10.678 -3.174 -2.058 1.237 H10 KJS 45
KJS H11 H11 H 0 1 N N N N N N 21.344 -5.265 10.684 -7.613 -1.713 -1.023 H11 KJS 46
KJS H12 H12 H 0 1 N N N N N N 21.100 -3.576 10.123 -8.119 -0.744 -2.427 H12 KJS 47
KJS H13 H13 H 0 1 N N N N N N 22.668 -4.403 9.829 -6.391 -0.906 -2.034 H13 KJS 48
KJS H14 H14 H 0 1 N N N N N N 23.857 -2.061 15.426 -7.088 3.784 1.865 H14 KJS 49
KJS H15 H15 H 0 1 N N N N N N 24.954 -1.492 14.122 -5.955 2.524 2.411 H15 KJS 50
KJS H16 H16 H 0 1 N N N N N N 23.369 -0.686 14.379 -5.541 3.550 1.016 H16 KJS 51
KJS H17 H17 H 0 1 N N N N N N 26.179 2.824 7.963 0.765 -1.235 1.041 H17 KJS 52
KJS H18 H18 H 0 1 N N N N N N 24.905 2.930 9.224 -0.733 -2.036 1.571 H18 KJS 53
KJS H19 H19 H 0 1 N N N N N N 23.167 2.589 7.585 0.451 -2.159 -1.239 H19 KJS 54
KJS H20 H20 H 0 1 N N N N N N 24.379 2.255 6.302 -1.047 -2.960 -0.708 H20 KJS 55
KJS H21 H21 H 0 1 N N N N N N 25.104 3.935 5.007 -0.339 -5.165 -1.041 H21 KJS 56
KJS H22 H22 H 0 1 N N N N N N 26.254 4.214 6.358 1.153 -4.553 -1.794 H22 KJS 57
KJS H23 H23 H 0 1 N N N N N N 26.109 6.145 4.808 0.979 -6.402 0.630 H23 KJS 58
KJS H24 H24 H 0 1 N N N N N N 25.600 6.554 6.481 1.501 -6.861 -1.010 H24 KJS 59
KJS H25 H25 H 0 1 N N N N N N 23.201 6.727 6.936 2.417 -4.859 1.906 H25 KJS 60
KJS H26 H26 H 0 1 N N N N N N 22.061 6.490 5.568 3.910 -4.278 1.128 H26 KJS 61
KJS H27 H27 H 0 1 N N N N N N 22.141 4.524 7.038 2.588 -3.015 -0.521 H27 KJS 62
KJS H28 H28 H 0 1 N N N N N N 22.749 4.146 5.391 2.103 -2.546 1.127 H28 KJS 63
KJS H29 H29 H 0 1 N N N N N N 29.050 1.297 9.308 3.666 0.092 1.161 H29 KJS 64
KJS H30 H30 H 0 1 N N N N N N 30.551 -0.243 10.501 6.051 0.522 0.729 H30 KJS 65
KJS H31 H31 H 0 1 N N N N N N 31.917 -1.670 11.066 7.866 1.519 1.061 H31 KJS 66
KJS H32 H32 H 0 1 N N N N N N 31.007 -3.158 11.494 7.715 0.720 -0.522 H32 KJS 67
KJS H33 H33 H 0 1 N N N N N N 32.826 -4.488 10.329 9.441 2.239 -1.453 H33 KJS 68
KJS H34 H34 H 0 1 N N N N N N 33.336 -3.648 11.832 9.591 3.037 0.131 H34 KJS 69
KJS H35 H35 H 0 1 N N N N N N 35.064 -3.450 10.063 11.370 1.339 -0.182 H35 KJS 70
KJS H36 H36 H 0 1 N N N N N N 33.866 -2.682 8.967 10.281 0.885 1.151 H36 KJS 71
KJS H37 H37 H 0 1 N N N N N N 34.376 -1.842 10.471 10.130 0.086 -0.432 H37 KJS 72
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
KJS O1 C20 SING N N 1
KJS O1 C19 SING N N 2
KJS C20 C21 SING N N 3
KJS C21 N2 SING N N 4
KJS C19 C18 SING N N 5
KJS C18 N2 SING N N 6
KJS C8 C7 SING N N 7
KJS C8 C9 SING N N 8
KJS C7 C6 SING N N 9
KJS N2 C17 SING N N 10
KJS C5 C6 DOUB Y N 11
KJS C5 C4 SING Y N 12
KJS C17 C16 SING N N 13
KJS C6 C27 SING Y N 14
KJS C4 C3 DOUB Y N 15
KJS C9 N DOUB Y N 16
KJS C9 N1 SING Y N 17
KJS N C10 SING Y N 18
KJS C16 N1 SING N N 19
KJS N1 C15 SING Y N 20
KJS C27 C28 DOUB Y N 21
KJS C3 O SING N N 22
KJS C3 C28 SING Y N 23
KJS C10 C15 DOUB Y N 24
KJS C10 C11 SING Y N 25
KJS O C2 SING N N 26
KJS C15 C14 SING Y N 27
KJS C C1 SING N N 28
KJS C11 C12 DOUB Y N 29
KJS C14 C13 DOUB Y N 30
KJS C26 C25 SING N N 31
KJS C2 C1 SING N N 32
KJS C12 C13 SING Y N 33
KJS C12 C22 SING N N 34
KJS C25 C22 SING Y N 35
KJS C25 N3 DOUB Y N 36
KJS C22 C23 DOUB Y N 37
KJS N3 O2 SING Y N 38
KJS C23 O2 SING Y N 39
KJS C23 C24 SING N N 40
KJS C4 H1 SING N N 41
KJS C5 H2 SING N N 42
KJS C7 H3 SING N N 43
KJS C7 H4 SING N N 44
KJS C8 H5 SING N N 45
KJS C8 H6 SING N N 46
KJS C11 H8 SING N N 47
KJS C13 H9 SING N N 48
KJS C14 H10 SING N N 49
KJS C26 H11 SING N N 50
KJS C26 H12 SING N N 51
KJS C26 H13 SING N N 52
KJS C24 H14 SING N N 53
KJS C24 H15 SING N N 54
KJS C24 H16 SING N N 55
KJS C16 H17 SING N N 56
KJS C16 H18 SING N N 57
KJS C17 H19 SING N N 58
KJS C17 H20 SING N N 59
KJS C21 H21 SING N N 60
KJS C21 H22 SING N N 61
KJS C20 H23 SING N N 62
KJS C20 H24 SING N N 63
KJS C19 H25 SING N N 64
KJS C19 H26 SING N N 65
KJS C18 H27 SING N N 66
KJS C18 H28 SING N N 67
KJS C27 H29 SING N N 68
KJS C28 H30 SING N N 69
KJS C2 H31 SING N N 70
KJS C2 H32 SING N N 71
KJS C1 H33 SING N N 72
KJS C1 H34 SING N N 73
KJS C H35 SING N N 74
KJS C H36 SING N N 75
KJS C H37 SING N N 76
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
KJS SMILES ACDLabs 12.01 c1c(ccc(c1)CCc4n(c2c(cc(cc2)c3c(noc3C)C)n4)CCN5CCOCC5)OCCC
KJS InChI InChI 1.03 InChI=1S/C29H36N4O3/c1-4-17-35-25-9-5-23(6-10-25)7-12-28-30-26-20-24(29-21(2)31-36-22(29)3)8-11-27(26)33(28)14-13-32-15-18-34-19-16-32/h5-6,8-11,20H,4,7,12-19H2,1-3H3
KJS InChIKey InChI 1.03 CGWBJJZOKGZCSJ-UHFFFAOYSA-N
KJS SMILES_CANONICAL CACTVS 3.385 CCCOc1ccc(CCc2nc3cc(ccc3n2CCN4CCOCC4)c5c(C)onc5C)cc1
KJS SMILES CACTVS 3.385 CCCOc1ccc(CCc2nc3cc(ccc3n2CCN4CCOCC4)c5c(C)onc5C)cc1
KJS SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 CCCOc1ccc(cc1)CCc2nc3cc(ccc3n2CCN4CCOCC4)c5c(noc5C)C
KJS SMILES "OpenEye OEToolkits" 2.0.6 CCCOc1ccc(cc1)CCc2nc3cc(ccc3n2CCN4CCOCC4)c5c(noc5C)C
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
KJS "SYSTEMATIC NAME" ACDLabs 12.01 5-(3,5-dimethyl-1,2-oxazol-4-yl)-1-[2-(morpholin-4-yl)ethyl]-2-[2-(4-propoxyphenyl)ethyl]-1H-benzimidazole
KJS "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 4-[2-[5-(3,5-dimethyl-1,2-oxazol-4-yl)-2-[2-(4-propoxyphenyl)ethyl]benzimidazol-1-yl]ethyl]morpholine
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
KJS 'Create component' 2018-12-19 RCSB
KJS 'Initial release' 2019-01-23 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
KJS C4 C 17.566 -4.210 1
KJS C5 C 16.066 -4.210 2
KJS C6 C 15.316 -2.911 3
KJS N1 N 10.691 -0.405 4
KJS C7 C 13.816 -2.911 5
KJS C8 C 13.066 -1.612 6
KJS N2 N 13.090 2.756 7
KJS C9 C 11.566 -1.612 8
KJS C10 C 9.271 -2.362 9
KJS C11 C 7.972 -3.112 10
KJS C12 C 6.673 -2.362 11
KJS N3 N 3.000 -3.617 12
KJS C13 C 6.673 -0.862 13
KJS C14 C 7.972 -0.112 14
KJS C15 C 9.271 -0.862 15
KJS C26 C 3.692 -1.035 16
KJS C25 C 4.004 -2.502 17
KJS O2 O 3.750 -4.916 18
KJS C23 C 5.217 -4.604 19
KJS C24 C 6.332 -5.607 20
KJS C22 C 5.374 -3.112 21
KJS N N 10.691 -2.819 22
KJS C16 C 11.156 1.021 23
KJS C17 C 12.624 1.330 24
KJS C21 C 12.088 3.872 25
KJS C20 C 12.554 5.298 26
KJS O1 O 14.022 5.607 27
KJS C19 C 15.024 4.491 28
KJS C18 C 14.558 3.065 29
KJS C27 C 16.066 -1.612 30
KJS C28 C 17.566 -1.612 31
KJS C3 C 18.316 -2.911 32
KJS O O 19.816 -2.911 33
KJS C2 C 20.566 -4.210 34
KJS C1 C 22.066 -4.210 35
KJS C C 22.816 -5.509 36
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
KJS O1 C20 SINGLE NONE 1
KJS O1 C19 SINGLE NONE 2
KJS C20 C21 SINGLE NONE 3
KJS C21 N2 SINGLE NONE 4
KJS C19 C18 SINGLE NONE 5
KJS C18 N2 SINGLE NONE 6
KJS C8 C7 SINGLE NONE 7
KJS C8 C9 SINGLE NONE 8
KJS C7 C6 SINGLE NONE 9
KJS N2 C17 SINGLE NONE 10
KJS C5 C6 SINGLE NONE 11
KJS C5 C4 DOUBLE NONE 12
KJS C17 C16 SINGLE NONE 13
KJS C6 C27 DOUBLE NONE 14
KJS C4 C3 SINGLE NONE 15
KJS C9 N DOUBLE NONE 16
KJS C9 N1 SINGLE NONE 17
KJS N C10 SINGLE NONE 18
KJS C16 N1 SINGLE NONE 19
KJS N1 C15 SINGLE NONE 20
KJS C27 C28 SINGLE NONE 21
KJS C3 O SINGLE NONE 22
KJS C3 C28 DOUBLE NONE 23
KJS C10 C15 SINGLE NONE 24
KJS C10 C11 DOUBLE NONE 25
KJS O C2 SINGLE NONE 26
KJS C15 C14 DOUBLE NONE 27
KJS C C1 SINGLE NONE 28
KJS C11 C12 SINGLE NONE 29
KJS C14 C13 SINGLE NONE 30
KJS C26 C25 SINGLE NONE 31
KJS C2 C1 SINGLE NONE 32
KJS C12 C13 DOUBLE NONE 33
KJS C12 C22 SINGLE NONE 34
KJS C25 C22 SINGLE NONE 35
KJS C25 N3 DOUBLE NONE 36
KJS C22 C23 DOUBLE NONE 37
KJS N3 O2 SINGLE NONE 38
KJS C23 O2 SINGLE NONE 39
KJS C23 C24 SINGLE NONE 40
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
KJS MurckoScaffold S1 scaffold c1ccc(CCc2nc3cc(-c4cnoc4)ccc3n2CCN2CCOCC2)cc1 InChI=1S/C24H26N4O2/c1-2-4-19(5-3-1)6-9-24-26-22-16-20(21-17-25-30-18-21)7-8-23(22)28(24)11-10-27-12-14-29-15-13-27/h1-5,7-8,16-18H,6,9-15H2 ZANSBUWIDHYLEQ-UHFFFAOYSA-N
KJS benzimidazole F1 fragment 'c1ccc2[nH]cnc2c1' InChI=1S/C7H6N2/c1-2-4-7-6(3-1)8-5-9-7/h1-5H,(H,8,9) HYZJCKYKOHLVJF-UHFFFAOYSA-N
KJS imidazole F2 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
KJS isoxazole F3 fragment c1cnoc1 InChI=1S/C3H3NO/c1-2-4-5-3-1/h1-3H CTAPFRYPJLPFDF-UHFFFAOYSA-N
KJS phenyl F4 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
KJS C4 S1 1
KJS C5 S1 1
KJS C6 S1 1
KJS N1 S1 1
KJS C7 S1 1
KJS C8 S1 1
KJS N2 S1 1
KJS C9 S1 1
KJS C10 S1 1
KJS C11 S1 1
KJS C12 S1 1
KJS N3 S1 1
KJS C13 S1 1
KJS C14 S1 1
KJS C15 S1 1
KJS C25 S1 1
KJS O2 S1 1
KJS C23 S1 1
KJS C22 S1 1
KJS N S1 1
KJS C16 S1 1
KJS C17 S1 1
KJS C21 S1 1
KJS C20 S1 1
KJS O1 S1 1
KJS C19 S1 1
KJS C18 S1 1
KJS C27 S1 1
KJS C28 S1 1
KJS C3 S1 1
KJS C10 F1 1
KJS N F1 1
KJS C9 F1 1
KJS N1 F1 1
KJS C15 F1 1
KJS C14 F1 1
KJS C13 F1 1
KJS C12 F1 1
KJS C11 F1 1
KJS C10 F2 1
KJS C15 F2 1
KJS N1 F2 1
KJS C9 F2 1
KJS N F2 1
KJS C23 F3 1
KJS C22 F3 1
KJS C25 F3 1
KJS N3 F3 1
KJS O2 F3 1
KJS C4 F4 1
KJS C5 F4 1
KJS C6 F4 1
KJS C27 F4 1
KJS C28 F4 1
KJS C3 F4 1
KJS C10 F4 2
KJS C15 F4 2
KJS C14 F4 2
KJS C13 F4 2
KJS C12 F4 2
KJS C11 F4 2
#
_pdbe_chem_comp_rdkit_properties.comp_id KJS
_pdbe_chem_comp_rdkit_properties.exactmw 488.279
_pdbe_chem_comp_rdkit_properties.amw 488.632
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 7
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 0
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 13
_pdbe_chem_comp_rdkit_properties.NumHBD 0
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 36
_pdbe_chem_comp_rdkit_properties.NumAtoms 72
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 7
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.448
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 263.136
_pdbe_chem_comp_rdkit_properties.tpsa 65.550
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.725
_pdbe_chem_comp_rdkit_properties.CrippenMR 136.397
_pdbe_chem_comp_rdkit_properties.chi0v 17.514
_pdbe_chem_comp_rdkit_properties.chi1v 9.466
_pdbe_chem_comp_rdkit_properties.chi2v 4.165
_pdbe_chem_comp_rdkit_properties.chi3v 4.165
_pdbe_chem_comp_rdkit_properties.chi4v 2.690
_pdbe_chem_comp_rdkit_properties.chi0n 53.514
_pdbe_chem_comp_rdkit_properties.chi1n 27.466
_pdbe_chem_comp_rdkit_properties.chi2n 4.165
_pdbe_chem_comp_rdkit_properties.chi3n 4.165
_pdbe_chem_comp_rdkit_properties.chi4n 2.690
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.160
_pdbe_chem_comp_rdkit_properties.kappa1 6.275
_pdbe_chem_comp_rdkit_properties.kappa2 11.269
_pdbe_chem_comp_rdkit_properties.kappa3 5.472
_pdbe_chem_comp_rdkit_properties.Phi 1.964
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
KJS UniChem ZINC ZINC000498035579
KJS UniChem PubChem 119081417
KJS UniChem ChemicalBook CB43169669
KJS UniChem 'Probes And Drugs' PD016966
KJS UniChem BindingDb 188517
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
KJS C4 4.390 1.656 -0.649 ETKDGv3 1
KJS C5 3.194 1.062 -0.744 ETKDGv3 2
KJS C6 3.021 -0.348 -0.318 ETKDGv3 3
KJS N1 -1.600 -0.592 1.638 ETKDGv3 4
KJS C7 1.659 -0.983 -0.380 ETKDGv3 5
KJS C8 0.893 -0.739 0.927 ETKDGv3 6
KJS N2 -1.018 2.238 0.835 ETKDGv3 7
KJS C9 -0.547 -1.167 0.832 ETKDGv3 8
KJS C10 -2.338 -2.264 0.260 ETKDGv3 9
KJS C11 -3.195 -3.092 -0.336 ETKDGv3 10
KJS C12 -4.635 -2.998 0.055 ETKDGv3 11
KJS N3 -6.712 -5.027 -2.220 ETKDGv3 12
KJS C13 -5.021 -2.081 0.981 ETKDGv3 13
KJS C14 -4.024 -1.175 1.615 ETKDGv3 14
KJS C15 -2.753 -1.308 1.235 ETKDGv3 15
KJS C26 -4.915 -3.629 -3.130 ETKDGv3 16
KJS C25 -5.755 -4.179 -2.024 ETKDGv3 17
KJS O2 -7.252 -5.321 -0.990 ETKDGv3 18
KJS C23 -6.568 -4.622 -0.008 ETKDGv3 19
KJS C24 -6.874 -4.720 1.452 ETKDGv3 20
KJS C22 -5.625 -3.886 -0.592 ETKDGv3 21
KJS N -0.937 -2.142 0.051 ETKDGv3 22
KJS C16 -1.532 0.537 2.566 ETKDGv3 23
KJS C17 -1.971 1.845 1.899 ETKDGv3 24
KJS C21 -0.729 3.687 0.878 ETKDGv3 25
KJS C20 -0.101 4.155 -0.445 ETKDGv3 26
KJS O1 -0.921 3.941 -1.588 ETKDGv3 27
KJS C19 -1.910 2.938 -1.403 ETKDGv3 28
KJS C18 -1.433 1.777 -0.514 ETKDGv3 29
KJS C27 4.073 -1.018 0.183 ETKDGv3 30
KJS C28 5.394 -0.365 0.281 ETKDGv3 31
KJS C3 5.558 0.906 -0.112 ETKDGv3 32
KJS O 6.828 1.486 0.001 ETKDGv3 33
KJS C2 7.131 2.824 -0.386 ETKDGv3 34
KJS C1 8.607 3.123 -0.127 ETKDGv3 35
KJS C 9.521 2.262 -0.997 ETKDGv3 36
KJS H1 4.490 2.685 -0.966 ETKDGv3 37
KJS H2 2.349 1.617 -1.132 ETKDGv3 38
KJS H3 1.754 -2.076 -0.563 ETKDGv3 39
KJS H4 1.094 -0.552 -1.235 ETKDGv3 40
KJS H5 1.378 -1.297 1.756 ETKDGv3 41
KJS H6 0.934 0.344 1.165 ETKDGv3 42
KJS H8 -2.849 -3.811 -1.067 ETKDGv3 43
KJS H9 -6.063 -1.975 1.254 ETKDGv3 44
KJS H10 -4.324 -0.438 2.347 ETKDGv3 45
KJS H11 -4.612 -2.587 -2.896 ETKDGv3 46
KJS H12 -4.009 -4.258 -3.255 ETKDGv3 47
KJS H13 -5.488 -3.627 -4.080 ETKDGv3 48
KJS H14 -7.403 -5.673 1.656 ETKDGv3 49
KJS H15 -7.528 -3.876 1.755 ETKDGv3 50
KJS H16 -5.937 -4.700 2.047 ETKDGv3 51
KJS H17 -2.197 0.333 3.433 ETKDGv3 52
KJS H18 -0.504 0.643 2.970 ETKDGv3 53
KJS H19 -2.005 2.610 2.708 ETKDGv3 54
KJS H20 -3.011 1.759 1.513 ETKDGv3 55
KJS H21 -1.658 4.276 1.056 ETKDGv3 56
KJS H22 -0.020 3.893 1.709 ETKDGv3 57
KJS H23 0.119 5.240 -0.369 ETKDGv3 58
KJS H24 0.868 3.631 -0.595 ETKDGv3 59
KJS H25 -2.187 2.532 -2.399 ETKDGv3 60
KJS H26 -2.825 3.395 -0.968 ETKDGv3 61
KJS H27 -0.557 1.303 -1.005 ETKDGv3 62
KJS H28 -2.230 1.003 -0.474 ETKDGv3 63
KJS H29 3.964 -2.040 0.526 ETKDGv3 64
KJS H30 6.233 -0.923 0.678 ETKDGv3 65
KJS H31 6.902 2.969 -1.465 ETKDGv3 66
KJS H32 6.513 3.530 0.211 ETKDGv3 67
KJS H33 8.804 4.194 -0.347 ETKDGv3 68
KJS H34 8.839 2.941 0.945 ETKDGv3 69
KJS H35 10.580 2.526 -0.795 ETKDGv3 70
KJS H36 9.375 1.185 -0.768 ETKDGv3 71
KJS H37 9.310 2.441 -2.073 ETKDGv3 72
#