data_KGU
#
_chem_comp.id KGU
_chem_comp.name
~{N}-[1,4-diethyl-2,3-bis(oxidanylidene)-7-piperidin-1-yl-quinoxalin-6-yl]-2-(4-methylpiperazin-1-yl)ethanamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C24 H36 N6 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2017-01-20
_chem_comp.pdbx_modified_date 2018-02-09
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 456.581
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code KGU
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5MWZ
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
KGU N N1 N 0 1 N N N N N N -7.833 7.644 9.611 -4.486 0.601 -0.220 N KGU 1
KGU CA C1 C 0 1 N N N N N N -6.477 8.209 9.500 -3.401 1.452 0.288 CA KGU 2
KGU C C2 C 0 1 N N N N N N -6.379 9.057 8.223 -2.075 0.784 0.028 C KGU 3
KGU O O1 O 0 1 N N N N N N -5.303 9.167 7.639 -2.038 -0.294 -0.527 O KGU 4
KGU CAA C3 C 0 1 N N N N N N -4.725 9.775 3.333 0.012 -3.762 1.686 CAA KGU 5
KGU CAB C4 C 0 1 N N N N N N -11.024 12.273 2.569 5.470 -0.192 -1.706 CAB KGU 6
KGU CAC C5 C 0 1 N N N N N N -11.168 5.130 10.218 -8.028 -1.676 -0.557 CAC KGU 7
KGU CAG C6 C 0 1 Y N N N N N -6.815 10.701 5.794 0.324 -0.668 0.251 CAG KGU 8
KGU CAH C7 C 0 1 Y N N N N N -9.381 11.686 5.546 2.688 0.784 0.027 CAH KGU 9
KGU CAI C8 C 0 1 N N N N N N -12.199 10.515 9.450 2.526 5.521 0.155 CAI KGU 10
KGU CAJ C9 C 0 1 N N N N N N -10.779 10.512 9.972 1.972 4.885 1.433 CAJ KGU 11
KGU CAK C10 C 0 1 N N N N N N -12.240 9.657 8.205 1.806 4.923 -1.057 CAK KGU 12
KGU CAL C11 C 0 1 N N N N N N -4.830 11.217 3.843 0.305 -3.479 0.212 CAL KGU 13
KGU CAM C12 C 0 1 N N N N N N -10.138 13.258 3.327 5.183 -0.483 -0.231 CAM KGU 14
KGU CAN C13 C 0 1 N N N N N N -9.871 11.201 8.964 2.153 3.367 1.361 CAN KGU 15
KGU CAO C14 C 0 1 N N N N N N -11.397 10.297 7.110 1.992 3.404 -1.057 CAO KGU 16
KGU CAP C15 C 0 1 N N N N N N -9.442 5.983 8.780 -5.659 -1.542 -0.068 CAP KGU 17
KGU CAQ C16 C 0 1 N N N N N N -9.546 6.680 11.083 -6.855 0.428 -0.810 CAQ KGU 18
KGU CAR C17 C 0 1 N N N N N N -8.014 6.507 8.695 -4.573 -0.652 0.542 CAR KGU 19
KGU CAS C18 C 0 1 N N N N N N -8.117 7.200 10.985 -5.769 1.317 -0.200 CAS KGU 20
KGU CAW C19 C 0 1 Y N N N N N -7.759 10.416 6.794 0.292 0.715 0.275 CAW KGU 21
KGU CAX C20 C 0 1 Y N N N N N -9.065 10.903 6.655 1.479 1.444 0.162 CAX KGU 22
KGU CAY C21 C 0 1 N N N N N N -6.559 12.494 2.641 2.728 -3.385 -0.028 CAY KGU 23
KGU CAZ C22 C 0 1 N N N N N N -7.865 12.988 2.514 3.994 -2.608 -0.142 CAZ KGU 24
KGU CBA C23 C 0 1 Y N N N N N -7.144 11.476 4.674 1.538 -1.335 0.121 CBA KGU 25
KGU CBB C24 C 0 1 Y N N N N N -8.440 11.974 4.555 2.724 -0.607 0.013 CBB KGU 26
KGU NAU N2 N 0 1 N N N N N N -7.542 9.654 7.890 -0.931 1.385 0.411 NAU KGU 27
KGU NBC N3 N 0 1 N N N N N N -9.762 5.560 10.153 -6.943 -0.826 -0.048 NBC KGU 28
KGU NBE N4 N 0 1 N N N N N N -10.043 10.700 7.572 1.445 2.843 0.186 NBE KGU 29
KGU NBF N5 N 0 1 N N N N N N -6.218 11.750 3.718 1.558 -2.728 0.098 NBF KGU 30
KGU NBG N6 N 0 1 N N N N N N -8.770 12.727 3.483 3.947 -1.260 -0.119 NBG KGU 31
KGU OAE O2 O 0 1 N N N N N N -5.711 12.735 1.770 2.750 -4.600 -0.049 OAE KGU 32
KGU OAF O3 O 0 1 N N N N N N -8.189 13.642 1.520 5.059 -3.182 -0.257 OAF KGU 33
KGU H2 H2 H 0 1 N N N N N N -5.742 7.392 9.455 -3.428 2.417 -0.218 H2 KGU 34
KGU H3 H3 H 0 1 N N N N N N -6.270 8.841 10.376 -3.528 1.601 1.361 H3 KGU 35
KGU H4 H4 H 0 1 N N N N N N -3.689 9.421 3.443 0.826 -4.347 2.113 H4 KGU 36
KGU H5 H5 H 0 1 N N N N N N -5.397 9.129 3.918 -0.080 -2.819 2.226 H5 KGU 37
KGU H6 H6 H 0 1 N N N N N N -5.014 9.739 2.272 -0.920 -4.321 1.770 H6 KGU 38
KGU H7 H7 H 0 1 N N N N N N -12.036 12.693 2.467 4.644 0.376 -2.132 H7 KGU 39
KGU H8 H8 H 0 1 N N N N N N -10.600 12.092 1.570 6.390 0.386 -1.790 H8 KGU 40
KGU H9 H9 H 0 1 N N N N N N -11.075 11.324 3.123 5.581 -1.132 -2.246 H9 KGU 41
KGU H10 H10 H 0 1 N N N N N N -11.408 4.814 11.244 -8.114 -2.566 0.067 H10 KGU 42
KGU H11 H11 H 0 1 N N N N N N -11.821 5.967 9.930 -8.966 -1.122 -0.531 H11 KGU 43
KGU H12 H12 H 0 1 N N N N N N -11.326 4.288 9.528 -7.807 -1.971 -1.582 H12 KGU 44
KGU H13 H13 H 0 1 N N N N N N -5.812 10.314 5.891 -0.594 -1.230 0.338 H13 KGU 45
KGU H14 H14 H 0 1 N N N N N N -10.382 12.081 5.450 3.604 1.349 -0.061 H14 KGU 46
KGU H15 H15 H 0 1 N N N N N N -12.505 11.543 9.205 2.360 6.598 0.183 H15 KGU 47
KGU H16 H16 H 0 1 N N N N N N -12.877 10.102 10.211 3.595 5.319 0.081 H16 KGU 48
KGU H17 H17 H 0 1 N N N N N N -10.444 9.475 10.119 2.510 5.275 2.297 H17 KGU 49
KGU H18 H18 H 0 1 N N N N N N -10.739 11.050 10.931 0.912 5.121 1.527 H18 KGU 50
KGU H19 H19 H 0 1 N N N N N N -13.280 9.565 7.859 0.743 5.160 -1.002 H19 KGU 51
KGU H20 H20 H 0 1 N N N N N N -11.841 8.658 8.436 2.225 5.341 -1.972 H20 KGU 52
KGU H21 H21 H 0 1 N N N N N N -4.533 11.243 4.902 0.397 -4.422 -0.328 H21 KGU 53
KGU H22 H22 H 0 1 N N N N N N -4.151 11.852 3.256 -0.509 -2.894 -0.215 H22 KGU 54
KGU H23 H23 H 0 1 N N N N N N -10.095 14.205 2.770 6.010 -1.052 0.194 H23 KGU 55
KGU H24 H24 H 0 1 N N N N N N -10.570 13.438 4.323 5.072 0.457 0.309 H24 KGU 56
KGU H25 H25 H 0 1 N N N N N N -8.826 11.037 9.267 3.214 3.131 1.281 H25 KGU 57
KGU H26 H26 H 0 1 N N N N N N -10.091 12.279 8.976 1.746 2.909 2.263 H26 KGU 58
KGU H27 H27 H 0 1 N N N N N N -11.922 11.192 6.743 1.468 2.974 -1.911 H27 KGU 59
KGU H28 H28 H 0 1 N N N N N N -11.285 9.575 6.288 3.054 3.168 -1.125 H28 KGU 60
KGU H29 H29 H 0 1 N N N N N N -10.137 6.780 8.477 -5.395 -1.786 -1.096 H29 KGU 61
KGU H30 H30 H 0 1 N N N N N N -9.552 5.123 8.103 -5.746 -2.460 0.513 H30 KGU 62
KGU H31 H31 H 0 1 N N N N N N -10.243 7.494 10.835 -7.814 0.945 -0.770 H31 KGU 63
KGU H32 H32 H 0 1 N N N N N N -9.735 6.336 12.111 -6.604 0.206 -1.847 H32 KGU 64
KGU H33 H33 H 0 1 N N N N N N -7.315 5.703 8.971 -3.615 -1.170 0.502 H33 KGU 65
KGU H34 H34 H 0 1 N N N N N N -7.808 6.834 7.665 -4.824 -0.431 1.579 H34 KGU 66
KGU H35 H35 H 0 1 N N N N N N -7.418 6.396 11.259 -6.034 1.561 0.828 H35 KGU 67
KGU H36 H36 H 0 1 N N N N N N -7.990 8.048 11.675 -5.682 2.235 -0.781 H36 KGU 68
KGU H37 H37 H 0 1 N N N N N N -8.315 9.521 8.511 -0.955 2.281 0.781 H37 KGU 69
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
KGU OAF CAZ DOUB N N 1
KGU OAE CAY DOUB N N 2
KGU CAZ CAY SING N N 3
KGU CAZ NBG SING N N 4
KGU CAB CAM SING N N 5
KGU CAY NBF SING N N 6
KGU CAM NBG SING N N 7
KGU CAA CAL SING N N 8
KGU NBG CBB SING N N 9
KGU NBF CAL SING N N 10
KGU NBF CBA SING N N 11
KGU CBB CBA DOUB Y N 12
KGU CBB CAH SING Y N 13
KGU CBA CAG SING Y N 14
KGU CAH CAX DOUB Y N 15
KGU CAG CAW DOUB Y N 16
KGU CAX CAW SING Y N 17
KGU CAX NBE SING N N 18
KGU CAW NAU SING N N 19
KGU CAO NBE SING N N 20
KGU CAO CAK SING N N 21
KGU NBE CAN SING N N 22
KGU O C DOUB N N 23
KGU NAU C SING N N 24
KGU CAK CAI SING N N 25
KGU C CA SING N N 26
KGU CAR CAP SING N N 27
KGU CAR N SING N N 28
KGU CAP NBC SING N N 29
KGU CAN CAJ SING N N 30
KGU CAI CAJ SING N N 31
KGU CA N SING N N 32
KGU N CAS SING N N 33
KGU NBC CAC SING N N 34
KGU NBC CAQ SING N N 35
KGU CAS CAQ SING N N 36
KGU CA H2 SING N N 37
KGU CA H3 SING N N 38
KGU CAA H4 SING N N 39
KGU CAA H5 SING N N 40
KGU CAA H6 SING N N 41
KGU CAB H7 SING N N 42
KGU CAB H8 SING N N 43
KGU CAB H9 SING N N 44
KGU CAC H10 SING N N 45
KGU CAC H11 SING N N 46
KGU CAC H12 SING N N 47
KGU CAG H13 SING N N 48
KGU CAH H14 SING N N 49
KGU CAI H15 SING N N 50
KGU CAI H16 SING N N 51
KGU CAJ H17 SING N N 52
KGU CAJ H18 SING N N 53
KGU CAK H19 SING N N 54
KGU CAK H20 SING N N 55
KGU CAL H21 SING N N 56
KGU CAL H22 SING N N 57
KGU CAM H23 SING N N 58
KGU CAM H24 SING N N 59
KGU CAN H25 SING N N 60
KGU CAN H26 SING N N 61
KGU CAO H27 SING N N 62
KGU CAO H28 SING N N 63
KGU CAP H29 SING N N 64
KGU CAP H30 SING N N 65
KGU CAQ H31 SING N N 66
KGU CAQ H32 SING N N 67
KGU CAR H33 SING N N 68
KGU CAR H34 SING N N 69
KGU CAS H35 SING N N 70
KGU CAS H36 SING N N 71
KGU NAU H37 SING N N 72
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
KGU InChI InChI 1.03 InChI=1S/C24H36N6O3/c1-4-29-20-15-18(25-22(31)17-27-13-11-26(3)12-14-27)19(28-9-7-6-8-10-28)16-21(20)30(5-2)24(33)23(29)32/h15-16H,4-14,17H2,1-3H3,(H,25,31)
KGU InChIKey InChI 1.03 IHQSAARJTQITPM-UHFFFAOYSA-N
KGU SMILES_CANONICAL CACTVS 3.385 CCN1C(=O)C(=O)N(CC)c2cc(N3CCCCC3)c(NC(=O)CN4CCN(C)CC4)cc12
KGU SMILES CACTVS 3.385 CCN1C(=O)C(=O)N(CC)c2cc(N3CCCCC3)c(NC(=O)CN4CCN(C)CC4)cc12
KGU SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 CCN1c2cc(c(cc2N(C(=O)C1=O)CC)N3CCCCC3)NC(=O)CN4CCN(CC4)C
KGU SMILES "OpenEye OEToolkits" 2.0.6 CCN1c2cc(c(cc2N(C(=O)C1=O)CC)N3CCCCC3)NC(=O)CN4CCN(CC4)C
#
_pdbx_chem_comp_identifier.comp_id KGU
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.6
_pdbx_chem_comp_identifier.identifier
~{N}-[1,4-diethyl-2,3-bis(oxidanylidene)-7-piperidin-1-yl-quinoxalin-6-yl]-2-(4-methylpiperazin-1-yl)ethanamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
KGU 'Create component' 2017-01-20 EBI
KGU 'Initial release' 2018-02-14 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
KGU N N 4.299 2.284 1
KGU CA C 4.299 0.783 2
KGU C C 5.598 0.034 3
KGU O O 6.897 0.783 4
KGU CAA C 12.109 0.850 5
KGU CAB C 12.109 -6.784 6
KGU CAC C 4.299 6.784 7
KGU CAG C 8.196 -1.467 8
KGU CAH C 8.196 -4.466 9
KGU CAI C 3.000 -5.966 10
KGU CAJ C 4.299 -6.716 11
KGU CAK C 3.000 -4.466 12
KGU CAL C 10.819 0.085 13
KGU CAM C 10.819 -6.018 14
KGU CAN C 5.598 -5.966 15
KGU CAO C 4.299 -3.716 16
KGU CAP C 3.000 4.534 17
KGU CAQ C 5.598 4.534 18
KGU CAR C 3.000 3.034 19
KGU CAS C 5.598 3.034 20
KGU CAW C 6.897 -2.216 21
KGU CAX C 6.897 -3.716 22
KGU CAY C 12.195 -2.185 23
KGU CAZ C 12.195 -3.748 24
KGU CBA C 9.495 -2.216 25
KGU CBB C 9.495 -3.716 26
KGU NAU N 5.598 -1.467 27
KGU NBC N 4.299 5.284 28
KGU NBE N 5.598 -4.466 29
KGU NBF N 10.836 -1.415 30
KGU NBG N 10.836 -4.519 31
KGU OAE O 13.491 -1.430 32
KGU OAF O 13.491 -4.503 33
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
KGU OAF CAZ DOUBLE NONE 1
KGU OAE CAY DOUBLE NONE 2
KGU CAZ CAY SINGLE NONE 3
KGU CAZ NBG SINGLE NONE 4
KGU CAB CAM SINGLE NONE 5
KGU CAY NBF SINGLE NONE 6
KGU CAM NBG SINGLE NONE 7
KGU CAA CAL SINGLE NONE 8
KGU NBG CBB SINGLE NONE 9
KGU NBF CAL SINGLE NONE 10
KGU NBF CBA SINGLE NONE 11
KGU CBB CBA SINGLE NONE 12
KGU CBB CAH DOUBLE NONE 13
KGU CBA CAG DOUBLE NONE 14
KGU CAH CAX SINGLE NONE 15
KGU CAG CAW SINGLE NONE 16
KGU CAX CAW DOUBLE NONE 17
KGU CAX NBE SINGLE NONE 18
KGU CAW NAU SINGLE NONE 19
KGU CAO NBE SINGLE NONE 20
KGU CAO CAK SINGLE NONE 21
KGU NBE CAN SINGLE NONE 22
KGU O C DOUBLE NONE 23
KGU NAU C SINGLE NONE 24
KGU CAK CAI SINGLE NONE 25
KGU C CA SINGLE NONE 26
KGU CAR CAP SINGLE NONE 27
KGU CAR N SINGLE NONE 28
KGU CAP NBC SINGLE NONE 29
KGU CAN CAJ SINGLE NONE 30
KGU CAI CAJ SINGLE NONE 31
KGU CA N SINGLE NONE 32
KGU N CAS SINGLE NONE 33
KGU NBC CAC SINGLE NONE 34
KGU NBC CAQ SINGLE NONE 35
KGU CAS CAQ SINGLE NONE 36
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
KGU MurckoScaffold S1 scaffold 'O=C(CN1CCNCC1)Nc1cc2[nH]c(=O)c(=O)[nH]c2cc1N1CCCCC1' InChI=1S/C19H26N6O3/c26-17(12-24-8-4-20-5-9-24)21-15-10-13-14(23-19(28)18(27)22-13)11-16(15)25-6-2-1-3-7-25/h10-11,20H,1-9,12H2,(H,21,26)(H,22,27)(H,23,28) JCQCNZNZAABPTB-UHFFFAOYSA-N
KGU amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
KGU peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
KGU phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
KGU piperazine F4 fragment C1CNCCN1 InChI=1S/C4H10N2/c1-2-6-4-3-5-1/h5-6H,1-4H2 GLUUGHFHXGJENI-UHFFFAOYSA-N
KGU pyrazine F5 fragment c1cnccn1 InChI=1S/C4H4N2/c1-2-6-4-3-5-1/h1-4H KYQCOXFCLRTKLS-UHFFFAOYSA-N
KGU quinoxaline F6 fragment c1ccc2nccnc2c1 InChI=1S/C8H6N2/c1-2-4-8-7(3-1)9-5-6-10-8/h1-6H XSCHRSMBECNVNS-UHFFFAOYSA-N
KGU Z85934875 F7 fragment CNC(=O)CN1CCNCC1 InChI=1S/C7H15N3O/c1-8-7(11)6-10-4-2-9-3-5-10/h9H,2-6H2,1H3,(H,8,11) SOTHHBNFPDRYCM-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
KGU N S1 1
KGU CA S1 1
KGU C S1 1
KGU O S1 1
KGU CAG S1 1
KGU CAH S1 1
KGU CAI S1 1
KGU CAJ S1 1
KGU CAK S1 1
KGU CAN S1 1
KGU CAO S1 1
KGU CAP S1 1
KGU CAQ S1 1
KGU CAR S1 1
KGU CAS S1 1
KGU CAW S1 1
KGU CAX S1 1
KGU CAY S1 1
KGU CAZ S1 1
KGU CBA S1 1
KGU CBB S1 1
KGU NAU S1 1
KGU NBC S1 1
KGU NBE S1 1
KGU NBF S1 1
KGU NBG S1 1
KGU OAE S1 1
KGU OAF S1 1
KGU NAU F1 1
KGU C F1 1
KGU O F1 1
KGU CA F1 1
KGU O F2 1
KGU C F2 1
KGU CA F2 1
KGU N F2 1
KGU CAG F3 1
KGU CBA F3 1
KGU CBB F3 1
KGU CAH F3 1
KGU CAX F3 1
KGU CAW F3 1
KGU N F4 1
KGU CAR F4 1
KGU CAP F4 1
KGU NBC F4 1
KGU CAQ F4 1
KGU CAS F4 1
KGU CAY F5 1
KGU CAZ F5 1
KGU NBG F5 1
KGU CBB F5 1
KGU CBA F5 1
KGU NBF F5 1
KGU CAW F6 1
KGU CAX F6 1
KGU CAH F6 1
KGU CBB F6 1
KGU CBA F6 1
KGU CAG F6 1
KGU NBF F6 1
KGU CAY F6 1
KGU CAZ F6 1
KGU NBG F6 1
KGU CAW F7 1
KGU NAU F7 1
KGU C F7 1
KGU O F7 1
KGU CA F7 1
KGU N F7 1
KGU CAR F7 1
KGU CAP F7 1
KGU NBC F7 1
KGU CAQ F7 1
KGU CAS F7 1
#
_pdbe_chem_comp_rdkit_properties.comp_id KGU
_pdbe_chem_comp_rdkit_properties.exactmw 456.285
_pdbe_chem_comp_rdkit_properties.amw 456.591
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 9
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 8
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 33
_pdbe_chem_comp_rdkit_properties.NumAtoms 69
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 9
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.625
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 244.751
_pdbe_chem_comp_rdkit_properties.tpsa 82.820
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.989
_pdbe_chem_comp_rdkit_properties.CrippenMR 128.809
_pdbe_chem_comp_rdkit_properties.chi0v 15.908
_pdbe_chem_comp_rdkit_properties.chi1v 8.414
_pdbe_chem_comp_rdkit_properties.chi2v 3.834
_pdbe_chem_comp_rdkit_properties.chi3v 3.834
_pdbe_chem_comp_rdkit_properties.chi4v 2.508
_pdbe_chem_comp_rdkit_properties.chi0n 51.908
_pdbe_chem_comp_rdkit_properties.chi1n 26.361
_pdbe_chem_comp_rdkit_properties.chi2n 3.834
_pdbe_chem_comp_rdkit_properties.chi3n 3.834
_pdbe_chem_comp_rdkit_properties.chi4n 2.508
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.650
_pdbe_chem_comp_rdkit_properties.kappa1 5.436
_pdbe_chem_comp_rdkit_properties.kappa2 10.091
_pdbe_chem_comp_rdkit_properties.kappa3 4.840
_pdbe_chem_comp_rdkit_properties.Phi 1.662
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
KGU UniChem ZINC ZINC000021777345
KGU UniChem eMolecules 27045695
KGU UniChem PubChem 46249496
KGU UniChem Mcule MCULE-1841802739
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
KGU N 3.363 -0.414 -2.116 ETKDGv3 1
KGU CA 2.521 -1.350 -1.339 ETKDGv3 2
KGU C 1.150 -0.781 -1.135 ETKDGv3 3
KGU O 0.365 -0.693 -2.118 ETKDGv3 4
KGU CAA -0.397 5.027 1.065 ETKDGv3 5
KGU CAB -6.236 0.242 1.766 ETKDGv3 6
KGU CAC 6.903 0.690 -1.674 ETKDGv3 7
KGU CAG -0.730 1.559 0.949 ETKDGv3 8
KGU CAH -2.998 -0.019 0.481 ETKDGv3 9
KGU CAI -1.111 -4.680 -0.971 ETKDGv3 10
KGU CAJ -0.232 -4.051 0.114 ETKDGv3 11
KGU CAK -1.590 -3.618 -1.966 ETKDGv3 12
KGU CAL -0.953 4.213 2.230 ETKDGv3 13
KGU CAM -5.716 1.131 0.641 ETKDGv3 14
KGU CAN -0.977 -2.923 0.833 ETKDGv3 15
KGU CAO -2.333 -2.489 -1.245 ETKDGv3 16
KGU CAP 4.871 0.493 -0.318 ETKDGv3 17
KGU CAQ 5.620 -1.400 -1.674 ETKDGv3 18
KGU CAR 3.767 0.787 -1.354 ETKDGv3 19
KGU CAS 4.534 -1.079 -2.717 ETKDGv3 20
KGU CAW -0.569 0.191 0.424 ETKDGv3 21
KGU CAX -1.653 -0.585 0.243 ETKDGv3 22
KGU CAY -3.428 3.950 1.948 ETKDGv3 23
KGU CAZ -4.615 3.146 1.643 ETKDGv3 24
KGU CBA -1.950 2.077 1.212 ETKDGv3 25
KGU CBB -3.165 1.254 0.903 ETKDGv3 26
KGU NAU 0.754 -0.293 0.155 ETKDGv3 27
KGU NBC 6.029 -0.211 -0.902 ETKDGv3 28
KGU NBE -1.521 -1.967 -0.139 ETKDGv3 29
KGU NBF -2.106 3.400 1.794 ETKDGv3 30
KGU NBG -4.487 1.835 1.060 ETKDGv3 31
KGU OAE -3.584 5.135 2.352 ETKDGv3 32
KGU OAF -5.756 3.624 1.895 ETKDGv3 33
KGU H2 2.396 -2.307 -1.891 ETKDGv3 34
KGU H3 2.980 -1.603 -0.361 ETKDGv3 35
KGU H4 -1.175 5.721 0.683 ETKDGv3 36
KGU H5 -0.073 4.359 0.240 ETKDGv3 37
KGU H6 0.475 5.621 1.408 ETKDGv3 38
KGU H7 -7.149 -0.291 1.427 ETKDGv3 39
KGU H8 -5.472 -0.508 2.058 ETKDGv3 40
KGU H9 -6.491 0.860 2.652 ETKDGv3 41
KGU H10 6.376 1.136 -2.542 ETKDGv3 42
KGU H11 7.273 1.510 -1.022 ETKDGv3 43
KGU H12 7.794 0.137 -2.040 ETKDGv3 44
KGU H13 0.176 2.123 1.108 ETKDGv3 45
KGU H14 -3.838 -0.673 0.308 ETKDGv3 46
KGU H15 -1.988 -5.177 -0.502 ETKDGv3 47
KGU H16 -0.527 -5.454 -1.513 ETKDGv3 48
KGU H17 0.060 -4.829 0.852 ETKDGv3 49
KGU H18 0.696 -3.648 -0.346 ETKDGv3 50
KGU H19 -0.715 -3.199 -2.510 ETKDGv3 51
KGU H20 -2.266 -4.088 -2.712 ETKDGv3 52
KGU H21 -0.162 3.579 2.680 ETKDGv3 53
KGU H22 -1.248 4.910 3.044 ETKDGv3 54
KGU H23 -5.544 0.539 -0.281 ETKDGv3 55
KGU H24 -6.509 1.858 0.363 ETKDGv3 56
KGU H25 -1.811 -3.348 1.433 ETKDGv3 57
KGU H26 -0.276 -2.420 1.534 ETKDGv3 58
KGU H27 -3.298 -2.872 -0.846 ETKDGv3 59
KGU H28 -2.553 -1.682 -1.977 ETKDGv3 60
KGU H29 5.195 1.450 0.149 ETKDGv3 61
KGU H30 4.457 -0.119 0.511 ETKDGv3 62
KGU H31 5.242 -2.174 -0.973 ETKDGv3 63
KGU H32 6.499 -1.850 -2.186 ETKDGv3 64
KGU H33 2.894 1.238 -0.838 ETKDGv3 65
KGU H34 4.125 1.561 -2.065 ETKDGv3 66
KGU H35 4.229 -2.017 -3.231 ETKDGv3 67
KGU H36 4.956 -0.427 -3.510 ETKDGv3 68
KGU H37 1.495 -0.117 0.870 ETKDGv3 69
#