data_KG4
#
_chem_comp.id KG4
_chem_comp.name "5'-O-[(R)-(carboxyoxy)(hydroxy)phosphoryl]adenosine"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C11 H14 N5 O9 P"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2018-12-03
_chem_comp.pdbx_modified_date 2019-05-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 391.231
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code KG4
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6N9A
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
KG4 O1A O1 O 0 1 N N N N N N -66.711 31.195 3.582 -3.984 0.987 1.611 O1A KG4 1
KG4 PA P1 P 0 1 N N N N N N -66.072 29.936 4.124 -4.114 0.126 0.257 PA KG4 2
KG4 O2A O2 O 0 1 N N N N N N -65.240 29.272 3.049 -4.974 -1.053 0.503 O2A KG4 3
KG4 O3A O3 O 0 1 N N N N N N -65.108 30.331 5.357 -4.769 1.036 -0.898 O3A KG4 4
KG4 CB C1 C 0 1 N N N N N N -64.340 29.327 6.087 -6.037 1.443 -0.709 CB KG4 5
KG4 O2B O4 O 0 1 N N N N N N -63.759 28.415 5.452 -6.635 1.121 0.298 O2B KG4 6
KG4 O1B O5 O 0 1 N N N N N N -64.278 29.408 7.338 -6.644 2.206 -1.636 O1B KG4 7
KG4 "O5'" O6 O 0 1 N N N N N N -67.236 28.932 4.632 -2.653 -0.364 -0.210 "O5'" KG4 8
KG4 "C5'" C2 C 0 1 N N N N N N -67.183 27.523 4.380 -1.856 -1.273 0.552 "C5'" KG4 9
KG4 "C4'" C3 C 0 1 N N R N N N -68.323 26.781 5.082 -0.533 -1.525 -0.174 "C4'" KG4 10
KG4 "C3'" C4 C 0 1 N N S N N N -68.342 25.291 4.744 0.308 -2.572 0.588 "C3'" KG4 11
KG4 "O3'" O7 O 0 1 N N N N N N -68.465 24.489 5.926 0.155 -3.864 -0.004 "O3'" KG4 12
KG4 "C2'" C5 C 0 1 N N R N N N -69.563 25.098 3.868 1.762 -2.073 0.431 "C2'" KG4 13
KG4 "O2'" O8 O 0 1 N N N N N N -70.172 23.814 4.045 2.551 -3.041 -0.263 "O2'" KG4 14
KG4 "C1'" C6 C 0 1 N N R N N N -70.469 26.232 4.317 1.627 -0.783 -0.408 "C1'" KG4 15
KG4 "O4'" O9 O 0 1 N N N N N N -69.595 27.307 4.680 0.275 -0.328 -0.174 "O4'" KG4 16
KG4 N9 N1 N 0 1 Y N N N N N -71.420 26.604 3.244 2.590 0.224 0.045 N9 KG4 17
KG4 C4 C7 C 0 1 Y N N N N N -72.748 26.510 3.357 3.899 0.332 -0.353 C4 KG4 18
KG4 C5 C8 C 0 1 Y N N N N N -73.298 26.939 2.165 4.424 1.435 0.341 C5 KG4 19
KG4 N7 N2 N 0 1 Y N N N N N -72.281 27.286 1.349 3.428 1.934 1.112 N7 KG4 20
KG4 C8 C9 C 0 1 Y N N N N N -71.124 27.076 2.023 2.349 1.227 0.935 C8 KG4 21
KG4 N3 N3 N 0 1 Y N N N N N -73.559 26.098 4.367 4.685 -0.341 -1.186 N3 KG4 22
KG4 C2 C10 C 0 1 Y N N N N N -74.896 26.096 4.235 5.939 0.017 -1.362 C2 KG4 23
KG4 N1 N4 N 0 1 Y N N N N N -75.499 26.499 3.105 6.477 1.046 -0.733 N1 KG4 24
KG4 C6 C11 C 0 1 Y N N N N N -74.777 26.926 2.047 5.768 1.779 0.119 C6 KG4 25
KG4 N6 N5 N 0 1 N N N N N N -75.397 27.330 0.916 6.341 2.855 0.774 N6 KG4 26
KG4 H1 H1 H 0 1 N N N N N N -66.459 31.313 2.674 -3.433 1.777 1.523 H1 KG4 27
KG4 H2 H2 H 0 1 N N N N N N -63.746 28.697 7.676 -7.556 2.474 -1.456 H2 KG4 28
KG4 H3 H3 H 0 1 N N N N N N -67.259 27.351 3.296 -1.656 -0.846 1.535 H3 KG4 29
KG4 H4 H4 H 0 1 N N N N N N -66.223 27.131 4.747 -2.392 -2.216 0.668 H4 KG4 30
KG4 H5 H5 H 0 1 N N N N N N -68.198 26.893 6.169 -0.719 -1.857 -1.195 H5 KG4 31
KG4 H6 H6 H 0 1 N N N N N N -67.434 25.028 4.182 0.023 -2.599 1.640 H6 KG4 32
KG4 H7 H7 H 0 1 N N N N N N -67.698 24.612 6.474 0.662 -4.560 0.436 H7 KG4 33
KG4 H8 H8 H 0 1 N N N N N N -69.284 25.251 2.815 2.198 -1.851 1.404 H8 KG4 34
KG4 H9 H9 H 0 1 N N N N N N -69.574 23.136 3.753 2.668 -3.871 0.218 H9 KG4 35
KG4 H10 H10 H 0 1 N N N N N N -71.035 25.899 5.199 1.774 -1.001 -1.466 H10 KG4 36
KG4 H11 H11 H 0 1 N N N N N N -70.130 27.258 1.641 1.404 1.406 1.427 H11 KG4 37
KG4 H12 H12 H 0 1 N N N N N N -75.504 25.760 5.062 6.551 -0.551 -2.047 H12 KG4 38
KG4 H13 H13 H 0 1 N N N N N N -76.387 27.249 1.031 5.814 3.382 1.395 H13 KG4 39
KG4 H14 H14 H 0 1 N N N N N N -75.160 28.283 0.728 7.270 3.083 0.613 H14 KG4 40
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
KG4 N6 C6 SING N N 1
KG4 N7 C8 DOUB Y N 2
KG4 N7 C5 SING Y N 3
KG4 C8 N9 SING Y N 4
KG4 C6 C5 DOUB Y N 5
KG4 C6 N1 SING Y N 6
KG4 C5 C4 SING Y N 7
KG4 O2A PA DOUB N N 8
KG4 N1 C2 DOUB Y N 9
KG4 N9 C4 SING Y N 10
KG4 N9 "C1'" SING N N 11
KG4 C4 N3 DOUB Y N 12
KG4 O1A PA SING N N 13
KG4 "C2'" "O2'" SING N N 14
KG4 "C2'" "C1'" SING N N 15
KG4 "C2'" "C3'" SING N N 16
KG4 PA "O5'" SING N N 17
KG4 PA O3A SING N N 18
KG4 C2 N3 SING Y N 19
KG4 "C1'" "O4'" SING N N 20
KG4 "C5'" "O5'" SING N N 21
KG4 "C5'" "C4'" SING N N 22
KG4 "O4'" "C4'" SING N N 23
KG4 "C3'" "C4'" SING N N 24
KG4 "C3'" "O3'" SING N N 25
KG4 O3A CB SING N N 26
KG4 O2B CB DOUB N N 27
KG4 CB O1B SING N N 28
KG4 O1A H1 SING N N 29
KG4 O1B H2 SING N N 30
KG4 "C5'" H3 SING N N 31
KG4 "C5'" H4 SING N N 32
KG4 "C4'" H5 SING N N 33
KG4 "C3'" H6 SING N N 34
KG4 "O3'" H7 SING N N 35
KG4 "C2'" H8 SING N N 36
KG4 "O2'" H9 SING N N 37
KG4 "C1'" H10 SING N N 38
KG4 C8 H11 SING N N 39
KG4 C2 H12 SING N N 40
KG4 N6 H13 SING N N 41
KG4 N6 H14 SING N N 42
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
KG4 SMILES ACDLabs 12.01 OP(OCC1C(O)C(O)C(O1)n3c2ncnc(c2nc3)N)(OC(O)=O)=O
KG4 InChI InChI 1.03 InChI=1S/C11H14N5O9P/c12-8-5-9(14-2-13-8)16(3-15-5)10-7(18)6(17)4(24-10)1-23-26(21,22)25-11(19)20/h2-4,6-7,10,17-18H,1H2,(H,19,20)(H,21,22)(H2,12,13,14)/t4-,6-,7-,10-/m1/s1
KG4 InChIKey InChI 1.03 ZYLWEGVHTNBJTI-KQYNXXCUSA-N
KG4 SMILES_CANONICAL CACTVS 3.385 Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(=O)OC(O)=O)[C@@H](O)[C@H]3O
KG4 SMILES CACTVS 3.385 Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)OC(O)=O)[CH](O)[CH]3O
KG4 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)OC(=O)O)O)O)N
KG4 SMILES "OpenEye OEToolkits" 2.0.6 c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OC(=O)O)O)O)N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
KG4 "SYSTEMATIC NAME" ACDLabs 12.01 "5'-O-[(R)-(carboxyoxy)(hydroxy)phosphoryl]adenosine"
KG4 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] hydrogen carbonate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
KG4 'Create component' 2018-12-03 RCSB
KG4 'Initial release' 2019-05-22 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
KG4 O1A O 11.833 5.099 1
KG4 PA P 12.713 3.884 2
KG4 O2A O 13.592 2.669 3
KG4 O3A O 13.928 4.764 4
KG4 CB C 15.297 4.152 5
KG4 O2B O 16.512 5.031 6
KG4 O1B O 15.451 2.659 7
KG4 "O5'" O 11.498 3.005 8
KG4 "C5'" C 10.129 3.617 9
KG4 "C4'" C 8.913 2.738 10
KG4 "C3'" C 7.487 3.204 11
KG4 "O3'" O 7.027 4.631 12
KG4 "C2'" C 6.604 1.992 13
KG4 "O2'" O 5.104 1.994 14
KG4 "C1'" C 7.483 0.777 15
KG4 "O4'" O 8.911 1.238 16
KG4 N9 N 7.018 -0.649 17
KG4 C4 C 5.598 -1.106 18
KG4 C5 C 5.598 -2.606 19
KG4 N7 N 7.018 -3.063 20
KG4 C8 C 7.893 -1.856 21
KG4 N3 N 4.299 -0.356 22
KG4 C2 C 3.000 -1.106 23
KG4 N1 N 3.000 -2.606 24
KG4 C6 C 4.299 -3.356 25
KG4 N6 N 4.299 -4.856 26
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
KG4 N6 C6 SINGLE NONE 1
KG4 N7 C8 DOUBLE NONE 2
KG4 N7 C5 SINGLE NONE 3
KG4 C8 N9 SINGLE NONE 4
KG4 C6 C5 DOUBLE NONE 5
KG4 C6 N1 SINGLE NONE 6
KG4 C5 C4 SINGLE NONE 7
KG4 O2A PA DOUBLE NONE 8
KG4 N1 C2 DOUBLE NONE 9
KG4 N9 C4 SINGLE NONE 10
KG4 "C1'" N9 SINGLE BEGINWEDGE 11
KG4 C4 N3 DOUBLE NONE 12
KG4 PA O1A SINGLE BEGINDASH 13
KG4 "C2'" "O2'" SINGLE BEGINDASH 14
KG4 "C2'" "C1'" SINGLE NONE 15
KG4 "C2'" "C3'" SINGLE NONE 16
KG4 PA "O5'" SINGLE NONE 17
KG4 PA O3A SINGLE NONE 18
KG4 C2 N3 SINGLE NONE 19
KG4 "C1'" "O4'" SINGLE NONE 20
KG4 "C5'" "O5'" SINGLE NONE 21
KG4 "C4'" "C5'" SINGLE BEGINWEDGE 22
KG4 "O4'" "C4'" SINGLE NONE 23
KG4 "C3'" "C4'" SINGLE NONE 24
KG4 "C3'" "O3'" SINGLE BEGINDASH 25
KG4 O3A CB SINGLE NONE 26
KG4 O2B CB DOUBLE NONE 27
KG4 CB O1B SINGLE NONE 28
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
KG4 MurckoScaffold S1 scaffold 'c1ncc2ncn([C@H]3CCCO3)c2n1' InChI=1S/C9H10N4O/c1-2-8(14-3-1)13-6-12-7-4-10-5-11-9(7)13/h4-6,8H,1-3H2/t8-/m1/s1 DAKONNSVCLKUJN-MRVPVSSYSA-N
KG4 adenine F1 fragment 'Nc1ncnc2nc[nH]c12' InChI=1S/C5H5N5/c6-4-3-5(9-1-7-3)10-2-8-4/h1-2H,(H3,6,7,8,9,10) GFFGJBXGBJISGV-UHFFFAOYSA-N
KG4 imidazole F2 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
KG4 phosphate F3 fragment O=P(O)(O)O InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4) NBIIXXVUZAFLBC-UHFFFAOYSA-N
KG4 purine F4 fragment 'c1ncc2[nH]cnc2n1' InChI=1S/C5H4N4/c1-4-5(8-2-6-1)9-3-7-4/h1-3H,(H,6,7,8,9) KDCGOANMDULRCW-UHFFFAOYSA-N
KG4 pyrimidine F5 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
KG4 ribose F6 fragment OCC1OCC(O)C1O InChI=1S/C5H10O4/c6-1-4-5(8)3(7)2-9-4/h3-8H,1-2H2 KZVAAIRBJJYZOW-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
KG4 "C4'" S1 1
KG4 "C3'" S1 1
KG4 "C2'" S1 1
KG4 "C1'" S1 1
KG4 "O4'" S1 1
KG4 N9 S1 1
KG4 C4 S1 1
KG4 C5 S1 1
KG4 N7 S1 1
KG4 C8 S1 1
KG4 N3 S1 1
KG4 C2 S1 1
KG4 N1 S1 1
KG4 C6 S1 1
KG4 N1 F1 1
KG4 C6 F1 1
KG4 C5 F1 1
KG4 C4 F1 1
KG4 N3 F1 1
KG4 C2 F1 1
KG4 N9 F1 1
KG4 C8 F1 1
KG4 N7 F1 1
KG4 N6 F1 1
KG4 C4 F2 1
KG4 C5 F2 1
KG4 N7 F2 1
KG4 C8 F2 1
KG4 N9 F2 1
KG4 O1A F3 1
KG4 PA F3 1
KG4 O2A F3 1
KG4 "O5'" F3 1
KG4 O3A F3 1
KG4 N7 F4 1
KG4 C8 F4 1
KG4 N9 F4 1
KG4 C4 F4 1
KG4 C5 F4 1
KG4 C6 F4 1
KG4 N1 F4 1
KG4 C2 F4 1
KG4 N3 F4 1
KG4 C5 F5 1
KG4 C6 F5 1
KG4 N1 F5 1
KG4 C2 F5 1
KG4 N3 F5 1
KG4 C4 F5 1
KG4 "C2'" F6 1
KG4 "C3'" F6 1
KG4 "C4'" F6 1
KG4 "O4'" F6 1
KG4 "C1'" F6 1
KG4 "C5'" F6 1
KG4 "O5'" F6 1
KG4 "O3'" F6 1
KG4 "O2'" F6 1
#
_pdbe_chem_comp_rdkit_properties.comp_id KG4
_pdbe_chem_comp_rdkit_properties.exactmw 391.053
_pdbe_chem_comp_rdkit_properties.amw 391.233
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 14
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 6
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 9
_pdbe_chem_comp_rdkit_properties.NumHBD 5
_pdbe_chem_comp_rdkit_properties.NumHBA 14
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 26
_pdbe_chem_comp_rdkit_properties.NumAtoms 40
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 15
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.455
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 5
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 164.076
_pdbe_chem_comp_rdkit_properties.tpsa 212.370
_pdbe_chem_comp_rdkit_properties.CrippenClogP -1.970
_pdbe_chem_comp_rdkit_properties.CrippenMR 77.516
_pdbe_chem_comp_rdkit_properties.chi0v 12.752
_pdbe_chem_comp_rdkit_properties.chi1v 7.560
_pdbe_chem_comp_rdkit_properties.chi2v 3.342
_pdbe_chem_comp_rdkit_properties.chi3v 3.342
_pdbe_chem_comp_rdkit_properties.chi4v 2.096
_pdbe_chem_comp_rdkit_properties.chi0n 25.858
_pdbe_chem_comp_rdkit_properties.chi1n 12.627
_pdbe_chem_comp_rdkit_properties.chi2n 2.654
_pdbe_chem_comp_rdkit_properties.chi3n 2.654
_pdbe_chem_comp_rdkit_properties.chi4n 1.682
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.350
_pdbe_chem_comp_rdkit_properties.kappa1 7.718
_pdbe_chem_comp_rdkit_properties.kappa2 6.753
_pdbe_chem_comp_rdkit_properties.kappa3 3.461
_pdbe_chem_comp_rdkit_properties.Phi 2.004
#
_pdbe_chem_comp_external_mappings.comp_id KG4
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PubChem
_pdbe_chem_comp_external_mappings.resource_id 90898916
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
KG4 O1A 5.562 -0.081 1.711 ETKDGv3 1
KG4 PA 4.108 0.465 1.040 ETKDGv3 2
KG4 O2A 4.068 1.976 1.102 ETKDGv3 3
KG4 O3A 4.019 -0.050 -0.600 ETKDGv3 4
KG4 CB 4.971 0.318 -1.552 ETKDGv3 5
KG4 O2B 5.948 1.052 -1.241 ETKDGv3 6
KG4 O1B 4.833 -0.133 -2.860 ETKDGv3 7
KG4 "O5'" 2.808 -0.189 1.929 ETKDGv3 8
KG4 "C5'" 1.605 0.205 1.311 ETKDGv3 9
KG4 "C4'" 0.417 -0.393 2.076 ETKDGv3 10
KG4 "C3'" 0.384 -1.921 1.986 ETKDGv3 11
KG4 "O3'" -0.112 -2.464 3.183 ETKDGv3 12
KG4 "C2'" -0.589 -2.155 0.860 ETKDGv3 13
KG4 "O2'" -1.317 -3.344 1.024 ETKDGv3 14
KG4 "C1'" -1.500 -0.937 0.945 ETKDGv3 15
KG4 "O4'" -0.782 0.125 1.538 ETKDGv3 16
KG4 N9 -1.976 -0.540 -0.383 ETKDGv3 17
KG4 C4 -2.489 0.729 -0.747 ETKDGv3 18
KG4 C5 -3.330 0.570 -1.874 ETKDGv3 19
KG4 N7 -3.390 -0.807 -2.213 ETKDGv3 20
KG4 C8 -2.622 -1.408 -1.342 ETKDGv3 21
KG4 N3 -2.350 1.860 -0.124 ETKDGv3 22
KG4 C2 -3.051 3.008 -0.658 ETKDGv3 23
KG4 N1 -3.831 2.883 -1.707 ETKDGv3 24
KG4 C6 -4.014 1.605 -2.358 ETKDGv3 25
KG4 N6 -4.915 1.469 -3.457 ETKDGv3 26
KG4 H1 5.512 0.180 2.666 ETKDGv3 27
KG4 H2 5.510 0.120 -3.571 ETKDGv3 28
KG4 H3 1.561 -0.143 0.254 ETKDGv3 29
KG4 H4 1.504 1.314 1.335 ETKDGv3 30
KG4 H5 0.495 -0.072 3.138 ETKDGv3 31
KG4 H6 1.375 -2.371 1.741 ETKDGv3 32
KG4 H7 0.644 -2.463 3.827 ETKDGv3 33
KG4 H8 -0.042 -2.159 -0.113 ETKDGv3 34
KG4 H9 -0.696 -4.086 0.799 ETKDGv3 35
KG4 H10 -2.379 -1.162 1.590 ETKDGv3 36
KG4 H11 -2.501 -2.483 -1.336 ETKDGv3 37
KG4 H12 -2.936 3.974 -0.185 ETKDGv3 38
KG4 H13 -5.058 0.548 -3.929 ETKDGv3 39
KG4 H14 -5.444 2.299 -3.803 ETKDGv3 40
#