data_KEB
#
_chem_comp.id KEB
_chem_comp.name (3~{S},6~{S})-3-[(3,5-dimethyl-4-oxidanyl-phenyl)methyl]-6-[(4-hydroxyphenyl)methyl]piperazine-2,5-dione
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C20 H22 N2 O4"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2019-05-15
_chem_comp.pdbx_modified_date 2020-04-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 354.400
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code KEB
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6RQ5
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
KEB C01 C1 C 0 1 N N N N N N -7.200 15.468 4.703 -4.515 2.692 -0.976 C01 KEB 1
KEB C02 C2 C 0 1 Y N N N N N -6.808 16.857 4.206 -4.214 1.231 -0.762 C02 KEB 2
KEB C03 C3 C 0 1 Y N N N N N -6.497 17.071 2.854 -2.904 0.801 -0.672 C03 KEB 3
KEB C04 C4 C 0 1 Y N N N N N -6.163 18.340 2.347 -2.627 -0.539 -0.475 C04 KEB 4
KEB C05 C5 C 0 1 N N N N N N -5.832 18.495 0.879 -1.198 -1.005 -0.378 C05 KEB 5
KEB C06 C6 C 0 1 N N S N N N -7.123 18.701 0.145 -0.745 -0.960 1.083 C06 KEB 6
KEB C08 C7 C 0 1 N N N N N N -8.755 20.283 0.705 0.384 1.149 1.628 C08 KEB 7
KEB C10 C8 C 0 1 N N S N N N -9.634 19.131 1.231 1.734 0.603 1.273 C10 KEB 8
KEB C11 C9 C 0 1 N N N N N N -9.659 19.197 2.779 2.124 1.096 -0.122 C11 KEB 9
KEB C12 C10 C 0 1 Y N N N N N -10.765 18.270 3.146 3.530 0.654 -0.437 C12 KEB 10
KEB C13 C11 C 0 1 Y N N N N N -12.020 18.829 3.394 4.599 1.462 -0.099 C13 KEB 11
KEB C14 C12 C 0 1 Y N N N N N -13.096 18.020 3.748 5.889 1.059 -0.387 C14 KEB 12
KEB C15 C13 C 0 1 Y N N N N N -12.904 16.631 3.892 6.110 -0.158 -1.016 C15 KEB 13
KEB C17 C14 C 0 1 Y N N N N N -11.630 16.080 3.682 5.035 -0.967 -1.353 C17 KEB 14
KEB C18 C15 C 0 1 Y N N N N N -10.561 16.911 3.327 3.747 -0.562 -1.058 C18 KEB 15
KEB C20 C16 C 0 1 N N N N N N -8.133 17.561 0.308 0.615 -1.579 1.195 C20 KEB 16
KEB C22 C17 C 0 1 Y N N N N N -6.065 19.406 3.245 -3.660 -1.452 -0.368 C22 KEB 17
KEB C23 C18 C 0 1 Y N N N N N -6.342 19.248 4.619 -4.971 -1.027 -0.456 C23 KEB 18
KEB C24 C19 C 0 1 N N N N N N -6.263 20.407 5.597 -6.096 -2.023 -0.339 C24 KEB 19
KEB C25 C20 C 0 1 Y N N N N N -6.704 17.968 5.085 -5.252 0.318 -0.648 C25 KEB 20
KEB N07 N1 N 0 1 N N N N N N -7.591 20.027 0.203 -0.735 0.424 1.536 N07 KEB 21
KEB N19 N2 N 0 1 N N N N N N -9.305 17.764 0.790 1.735 -0.854 1.281 N19 KEB 22
KEB O09 O1 O 0 1 N N N N N N -9.210 21.542 0.759 0.304 2.296 2.014 O09 KEB 23
KEB O16 O2 O 0 1 N N N N N N -13.921 15.783 4.223 7.378 -0.557 -1.301 O16 KEB 24
KEB O21 O3 O 0 1 N N N N N N -7.782 16.332 -0.086 0.704 -2.789 1.207 O21 KEB 25
KEB O26 O4 O 0 1 N N N N N N -6.978 17.798 6.420 -6.542 0.739 -0.729 O26 KEB 26
KEB H1 H1 H 0 1 N N N N N N -6.297 14.917 5.003 -4.605 3.190 -0.011 H1 KEB 27
KEB H2 H2 H 0 1 N N N N N N -7.874 15.565 5.567 -3.707 3.150 -1.547 H2 KEB 28
KEB H3 H3 H 0 1 N N N N N N -7.712 14.922 3.897 -5.451 2.794 -1.525 H3 KEB 29
KEB H4 H4 H 0 1 N N N N N N -6.515 16.229 2.177 -2.096 1.513 -0.756 H4 KEB 30
KEB H5 H5 H 0 1 N N N N N N -5.330 17.588 0.509 -1.123 -2.027 -0.750 H5 KEB 31
KEB H6 H6 H 0 1 N N N N N N -5.174 19.364 0.732 -0.561 -0.353 -0.976 H6 KEB 32
KEB H7 H7 H 0 1 N N N N N N -6.817 18.589 -0.906 -1.448 -1.530 1.691 H7 KEB 33
KEB H8 H8 H 0 1 N N N N N N -10.660 19.344 0.895 2.466 0.963 1.996 H8 KEB 34
KEB H9 H9 H 0 1 N N N N N N -8.703 18.856 3.203 1.438 0.679 -0.859 H9 KEB 35
KEB H10 H10 H 0 1 N N N N N N -9.871 20.219 3.126 2.070 2.184 -0.150 H10 KEB 36
KEB H11 H11 H 0 1 N N N N N N -12.157 19.897 3.311 4.427 2.409 0.390 H11 KEB 37
KEB H12 H12 H 0 1 N N N N N N -14.072 18.454 3.911 6.724 1.691 -0.124 H12 KEB 38
KEB H13 H13 H 0 1 N N N N N N -11.475 15.017 3.794 5.204 -1.915 -1.843 H13 KEB 39
KEB H14 H14 H 0 1 N N N N N N -9.575 16.492 3.194 2.911 -1.194 -1.317 H14 KEB 40
KEB H15 H15 H 0 1 N N N N N N -5.769 20.377 2.877 -3.441 -2.499 -0.214 H15 KEB 41
KEB H16 H16 H 0 1 N N N N N N -7.242 20.905 5.657 -6.390 -2.118 0.707 H16 KEB 42
KEB H17 H17 H 0 1 N N N N N N -5.983 20.029 6.591 -6.949 -1.679 -0.925 H17 KEB 43
KEB H18 H18 H 0 1 N N N N N N -5.506 21.127 5.252 -5.765 -2.991 -0.713 H18 KEB 44
KEB H19 H19 H 0 1 N N N N N N -7.022 20.773 -0.145 -1.577 0.838 1.782 H19 KEB 45
KEB H20 H20 H 0 1 N N N N N N -9.971 17.021 0.864 2.584 -1.317 1.352 H20 KEB 46
KEB H21 H21 H 0 1 N N N N N N -14.723 16.279 4.336 7.797 -1.069 -0.596 H21 KEB 47
KEB H22 H22 H 0 1 N N N N N N -6.866 18.625 6.875 -6.900 0.736 -1.628 H22 KEB 48
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
KEB O21 C20 DOUB N N 1
KEB C06 N07 SING N N 2
KEB C06 C20 SING N N 3
KEB C06 C05 SING N N 4
KEB N07 C08 SING N N 5
KEB C20 N19 SING N N 6
KEB C08 O09 DOUB N N 7
KEB C08 C10 SING N N 8
KEB N19 C10 SING N N 9
KEB C05 C04 SING N N 10
KEB C10 C11 SING N N 11
KEB C04 C03 DOUB Y N 12
KEB C04 C22 SING Y N 13
KEB C11 C12 SING N N 14
KEB C03 C02 SING Y N 15
KEB C12 C18 DOUB Y N 16
KEB C12 C13 SING Y N 17
KEB C22 C23 DOUB Y N 18
KEB C18 C17 SING Y N 19
KEB C13 C14 DOUB Y N 20
KEB C17 C15 DOUB Y N 21
KEB C14 C15 SING Y N 22
KEB C15 O16 SING N N 23
KEB C02 C01 SING N N 24
KEB C02 C25 DOUB Y N 25
KEB C23 C25 SING Y N 26
KEB C23 C24 SING N N 27
KEB C25 O26 SING N N 28
KEB C01 H1 SING N N 29
KEB C01 H2 SING N N 30
KEB C01 H3 SING N N 31
KEB C03 H4 SING N N 32
KEB C05 H5 SING N N 33
KEB C05 H6 SING N N 34
KEB C06 H7 SING N N 35
KEB C10 H8 SING N N 36
KEB C11 H9 SING N N 37
KEB C11 H10 SING N N 38
KEB C13 H11 SING N N 39
KEB C14 H12 SING N N 40
KEB C17 H13 SING N N 41
KEB C18 H14 SING N N 42
KEB C22 H15 SING N N 43
KEB C24 H16 SING N N 44
KEB C24 H17 SING N N 45
KEB C24 H18 SING N N 46
KEB N07 H19 SING N N 47
KEB N19 H20 SING N N 48
KEB O16 H21 SING N N 49
KEB O26 H22 SING N N 50
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
KEB InChI InChI 1.03 InChI=1S/C20H22N2O4/c1-11-7-14(8-12(2)18(11)24)10-17-20(26)21-16(19(25)22-17)9-13-3-5-15(23)6-4-13/h3-8,16-17,23-24H,9-10H2,1-2H3,(H,21,26)(H,22,25)/t16-,17-/m0/s1
KEB InChIKey InChI 1.03 UCEYENNEMBTPOB-IRXDYDNUSA-N
KEB SMILES_CANONICAL CACTVS 3.385 Cc1cc(C[C@@H]2NC(=O)[C@H](Cc3ccc(O)cc3)NC2=O)cc(C)c1O
KEB SMILES CACTVS 3.385 Cc1cc(C[CH]2NC(=O)[CH](Cc3ccc(O)cc3)NC2=O)cc(C)c1O
KEB SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 Cc1cc(cc(c1O)C)C[C@H]2C(=O)N[C@H](C(=O)N2)Cc3ccc(cc3)O
KEB SMILES "OpenEye OEToolkits" 2.0.7 Cc1cc(cc(c1O)C)CC2C(=O)NC(C(=O)N2)Cc3ccc(cc3)O
#
_pdbx_chem_comp_identifier.comp_id KEB
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier
(3~{S},6~{S})-3-[(3,5-dimethyl-4-oxidanyl-phenyl)methyl]-6-[(4-hydroxyphenyl)methyl]piperazine-2,5-dione
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
KEB 'Create component' 2019-05-15 PDBE
KEB 'Initial release' 2020-04-22 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
KEB C01 C 3.000 -6.000 1
KEB C02 C 4.299 -5.250 2
KEB C03 C 4.299 -3.750 3
KEB C04 C 5.598 -3.000 4
KEB C05 C 5.598 -1.500 5
KEB C06 C 6.897 -0.750 6
KEB C08 C 9.495 -0.750 7
KEB C10 C 9.495 0.750 8
KEB C11 C 10.794 1.500 9
KEB C12 C 10.794 3.000 10
KEB C13 C 12.093 3.750 11
KEB C14 C 12.093 5.250 12
KEB C15 C 10.794 6.000 13
KEB C17 C 9.495 5.250 14
KEB C18 C 9.495 3.750 15
KEB C20 C 6.897 0.750 16
KEB C22 C 6.897 -3.750 17
KEB C23 C 6.897 -5.250 18
KEB C24 C 8.196 -6.000 19
KEB C25 C 5.598 -6.000 20
KEB N07 N 8.196 -1.500 21
KEB N19 N 8.196 1.500 22
KEB O09 O 10.794 -1.500 23
KEB O16 O 10.794 7.500 24
KEB O21 O 5.598 1.500 25
KEB O26 O 5.598 -7.500 26
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
KEB O21 C20 DOUBLE NONE 1
KEB C06 N07 SINGLE NONE 2
KEB C06 C20 SINGLE NONE 3
KEB C06 C05 SINGLE BEGINWEDGE 4
KEB N07 C08 SINGLE NONE 5
KEB C20 N19 SINGLE NONE 6
KEB C08 O09 DOUBLE NONE 7
KEB C08 C10 SINGLE NONE 8
KEB N19 C10 SINGLE NONE 9
KEB C05 C04 SINGLE NONE 10
KEB C10 C11 SINGLE BEGINWEDGE 11
KEB C04 C03 SINGLE NONE 12
KEB C04 C22 DOUBLE NONE 13
KEB C11 C12 SINGLE NONE 14
KEB C03 C02 DOUBLE NONE 15
KEB C12 C18 SINGLE NONE 16
KEB C12 C13 DOUBLE NONE 17
KEB C22 C23 SINGLE NONE 18
KEB C18 C17 DOUBLE NONE 19
KEB C13 C14 SINGLE NONE 20
KEB C17 C15 SINGLE NONE 21
KEB C14 C15 DOUBLE NONE 22
KEB C15 O16 SINGLE NONE 23
KEB C02 C01 SINGLE NONE 24
KEB C02 C25 SINGLE NONE 25
KEB C23 C25 DOUBLE NONE 26
KEB C23 C24 SINGLE NONE 27
KEB C25 O26 SINGLE NONE 28
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
KEB MurckoScaffold S1 scaffold 'O=C1N[C@@H](Cc2ccccc2)C(=O)N[C@H]1Cc1ccccc1' InChI=1S/C18H18N2O2/c21-17-15(11-13-7-3-1-4-8-13)19-18(22)16(20-17)12-14-9-5-2-6-10-14/h1-10,15-16H,11-12H2,(H,19,22)(H,20,21)/t15-,16-/m0/s1 JUAPMRSLDANLAS-HOTGVXAUSA-N
KEB amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
KEB peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
KEB phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
KEB piperazine F4 fragment C1CNCCN1 InChI=1S/C4H10N2/c1-2-6-4-3-5-1/h5-6H,1-4H2 GLUUGHFHXGJENI-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
KEB C02 S1 1
KEB C03 S1 1
KEB C04 S1 1
KEB C05 S1 1
KEB C06 S1 1
KEB C08 S1 1
KEB C10 S1 1
KEB C11 S1 1
KEB C12 S1 1
KEB C13 S1 1
KEB C14 S1 1
KEB C15 S1 1
KEB C17 S1 1
KEB C18 S1 1
KEB C20 S1 1
KEB C22 S1 1
KEB C23 S1 1
KEB C25 S1 1
KEB N07 S1 1
KEB N19 S1 1
KEB O09 S1 1
KEB O21 S1 1
KEB N07 F1 1
KEB C08 F1 1
KEB O09 F1 1
KEB C10 F1 1
KEB N19 F1 2
KEB C20 F1 2
KEB O21 F1 2
KEB C06 F1 2
KEB O09 F2 1
KEB C08 F2 1
KEB C10 F2 1
KEB N19 F2 1
KEB O21 F2 2
KEB C20 F2 2
KEB C06 F2 2
KEB N07 F2 2
KEB C02 F3 1
KEB C03 F3 1
KEB C04 F3 1
KEB C22 F3 1
KEB C23 F3 1
KEB C25 F3 1
KEB C12 F3 2
KEB C18 F3 2
KEB C17 F3 2
KEB C15 F3 2
KEB C14 F3 2
KEB C13 F3 2
KEB N07 F4 1
KEB C06 F4 1
KEB C20 F4 1
KEB N19 F4 1
KEB C10 F4 1
KEB C08 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id KEB
_pdbe_chem_comp_rdkit_properties.exactmw 354.158
_pdbe_chem_comp_rdkit_properties.amw 354.406
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 6
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 4
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 4
_pdbe_chem_comp_rdkit_properties.NumHBA 4
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 26
_pdbe_chem_comp_rdkit_properties.NumAtoms 48
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 6
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.300
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 182.612
_pdbe_chem_comp_rdkit_properties.tpsa 98.660
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.339
_pdbe_chem_comp_rdkit_properties.CrippenMR 94.673
_pdbe_chem_comp_rdkit_properties.chi0v 12.527
_pdbe_chem_comp_rdkit_properties.chi1v 6.711
_pdbe_chem_comp_rdkit_properties.chi2v 2.875
_pdbe_chem_comp_rdkit_properties.chi3v 2.875
_pdbe_chem_comp_rdkit_properties.chi4v 1.750
_pdbe_chem_comp_rdkit_properties.chi0n 34.527
_pdbe_chem_comp_rdkit_properties.chi1n 17.422
_pdbe_chem_comp_rdkit_properties.chi2n 2.875
_pdbe_chem_comp_rdkit_properties.chi3n 2.875
_pdbe_chem_comp_rdkit_properties.chi4n 1.750
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.020
_pdbe_chem_comp_rdkit_properties.kappa1 5.030
_pdbe_chem_comp_rdkit_properties.kappa2 7.075
_pdbe_chem_comp_rdkit_properties.kappa3 3.795
_pdbe_chem_comp_rdkit_properties.Phi 1.369
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
KEB UniChem PubChem 146035899
KEB UniChem BindingDb 50505725
KEB UniChem BRENDA 265940
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
KEB C01 4.456 2.164 -0.275 ETKDGv3 1
KEB C02 3.693 1.570 0.877 ETKDGv3 2
KEB C03 2.408 1.209 0.717 ETKDGv3 3
KEB C04 1.643 0.618 1.838 ETKDGv3 4
KEB C05 0.217 0.178 1.622 ETKDGv3 5
KEB C06 0.132 -1.322 1.289 ETKDGv3 6
KEB C08 0.296 -1.722 -1.222 ETKDGv3 7
KEB C10 -1.196 -1.638 -1.397 ETKDGv3 8
KEB C11 -1.599 -0.248 -1.919 ETKDGv3 9
KEB C12 -3.075 -0.172 -2.209 ETKDGv3 10
KEB C13 -3.931 0.337 -1.304 ETKDGv3 11
KEB C14 -5.381 0.373 -1.587 ETKDGv3 12
KEB C15 -5.854 -0.111 -2.743 ETKDGv3 13
KEB C17 -4.919 -0.684 -3.737 ETKDGv3 14
KEB C18 -3.604 -0.715 -3.484 ETKDGv3 15
KEB C20 -1.304 -1.747 1.147 ETKDGv3 16
KEB C22 2.245 0.429 3.022 ETKDGv3 17
KEB C23 3.658 0.828 3.222 ETKDGv3 18
KEB C24 4.304 0.613 4.562 ETKDGv3 19
KEB C25 4.353 1.371 2.202 ETKDGv3 20
KEB N07 0.894 -1.631 0.077 ETKDGv3 21
KEB N19 -1.891 -1.946 -0.145 ETKDGv3 22
KEB O09 1.032 -1.866 -2.234 ETKDGv3 23
KEB O16 -7.222 -0.074 -3.000 ETKDGv3 24
KEB O21 -2.004 -1.921 2.180 ETKDGv3 25
KEB O26 5.686 1.740 2.401 ETKDGv3 26
KEB H1 4.803 3.183 -0.006 ETKDGv3 27
KEB H2 3.834 2.243 -1.192 ETKDGv3 28
KEB H3 5.334 1.525 -0.509 ETKDGv3 29
KEB H4 1.916 1.340 -0.240 ETKDGv3 30
KEB H5 -0.375 0.389 2.540 ETKDGv3 31
KEB H6 -0.236 0.778 0.807 ETKDGv3 32
KEB H7 0.573 -1.898 2.132 ETKDGv3 33
KEB H8 -1.490 -2.400 -2.153 ETKDGv3 34
KEB H9 -1.043 -0.032 -2.858 ETKDGv3 35
KEB H10 -1.309 0.537 -1.190 ETKDGv3 36
KEB H11 -3.571 0.719 -0.356 ETKDGv3 37
KEB H12 -6.057 0.792 -0.853 ETKDGv3 38
KEB H13 -5.298 -1.082 -4.670 ETKDGv3 39
KEB H14 -2.928 -1.140 -4.215 ETKDGv3 40
KEB H15 1.697 -0.024 3.840 ETKDGv3 41
KEB H16 4.666 1.582 4.967 ETKDGv3 42
KEB H17 5.162 -0.084 4.458 ETKDGv3 43
KEB H18 3.587 0.178 5.290 ETKDGv3 44
KEB H19 1.933 -1.707 0.151 ETKDGv3 45
KEB H20 -2.890 -2.249 -0.194 ETKDGv3 46
KEB H21 -7.602 -0.435 -3.867 ETKDGv3 47
KEB H22 6.255 2.152 1.673 ETKDGv3 48
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