data_J0T
#
_chem_comp.id J0T
_chem_comp.name
(2~{S},3~{R},4~{S},5~{R},6~{R})-4-[4-(3-fluorophenyl)-1,2,3-triazol-1-yl]-2-[(2~{R})-3-[4-(3-fluorophenyl)-1,2,3-triazol-1-yl]-2-oxidanyl-propyl]sulfanyl-6-(hydroxymethyl)oxane-3,5-diol
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C25 H26 F2 N6 O5 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2019-01-11
_chem_comp.pdbx_modified_date 2019-01-18
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 560.573
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code J0T
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6QGF
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
J0T C02 C1 C 0 1 Y N N N N N -13.185 8.563 -0.055 -7.284 1.672 -0.057 C02 J0T 1
J0T C03 C2 C 0 1 Y N N N N N -11.941 8.772 -0.672 -6.764 2.425 -1.107 C03 J0T 2
J0T C05 C3 C 0 1 Y N N N N N -10.773 9.014 1.457 -8.793 3.694 -1.200 C05 J0T 3
J0T C06 C4 C 0 1 Y N N N N N -12.016 8.779 2.039 -9.316 2.948 -0.156 C06 J0T 4
J0T C08 C5 C 0 1 Y N N N N N -14.362 8.315 -0.804 -6.472 0.593 0.559 C08 J0T 5
J0T C12 C6 C 0 1 Y N N N N N -15.701 8.281 -0.427 -5.208 0.215 0.207 C12 J0T 6
J0T C14 C7 C 0 1 N N R N N N -18.372 6.573 -0.844 -3.663 -2.656 0.000 C14 J0T 7
J0T C15 C8 C 0 1 N N S N N N -17.872 7.796 -1.649 -3.605 -1.527 1.034 C15 J0T 8
J0T C16 C9 C 0 1 N N R N N N -18.689 9.055 -1.255 -2.468 -0.569 0.664 C16 J0T 9
J0T C24 C10 C 0 1 N N N N N N -22.766 9.636 -1.175 1.656 -1.296 0.193 C24 J0T 10
J0T C33 C11 C 0 1 Y N N N N N -28.785 9.305 3.000 8.608 0.805 0.277 C33 J0T 11
J0T C35 C12 C 0 1 Y N N N N N -30.782 9.752 4.325 10.622 2.077 -0.035 C35 J0T 12
J0T C37 C13 C 0 1 Y N N N N N -29.498 7.853 4.848 10.321 0.777 1.960 C37 J0T 13
J0T C01 C14 C 0 1 Y N N N N N -13.197 8.526 1.339 -8.566 1.939 0.418 C01 J0T 14
J0T C04 C15 C 0 1 Y N N N N N -10.771 8.997 0.061 -7.521 3.431 -1.673 C04 J0T 15
J0T C13 C16 C 0 1 N N R N N N -19.882 6.440 -1.091 -2.305 -3.361 -0.052 C13 J0T 16
J0T C17 C17 C 0 1 N N S N N N -20.159 8.760 -1.481 -1.155 -1.353 0.587 C17 J0T 17
J0T C20 C18 C 0 1 N N N N N N -20.415 5.295 -0.192 -2.337 -4.452 -1.125 C20 J0T 18
J0T C25 C19 C 0 1 N N R N N N -23.749 9.928 -0.053 2.893 -0.491 -0.209 C25 J0T 19
J0T C27 C20 C 0 1 N N N N N N -25.119 9.377 -0.503 4.134 -1.382 -0.114 C27 J0T 20
J0T C30 C21 C 0 1 Y N N N N N -27.851 9.637 1.920 7.276 0.366 -0.208 C30 J0T 21
J0T C31 C22 C 0 1 Y N N N N N -26.807 8.925 1.352 6.406 -0.469 0.430 C31 J0T 22
J0T C34 C23 C 0 1 Y N N N N N -29.912 10.093 3.290 9.384 1.667 -0.495 C34 J0T 23
J0T C36 C24 C 0 1 Y N N N N N -30.616 8.624 5.137 11.089 1.632 1.191 C36 J0T 24
J0T C38 C25 C 0 1 Y N N N N N -28.619 8.181 3.807 9.084 0.362 1.509 C38 J0T 25
J0T F07 F1 F 0 1 N N N N N N -12.043 8.727 3.386 -10.560 3.209 0.302 F07 J0T 26
J0T F39 F2 F 0 1 N N N N N N -31.841 10.537 4.556 11.376 2.912 -0.782 F39 J0T 27
J0T N09 N1 N 0 1 Y N N N N N -14.366 7.971 -2.158 -6.831 -0.206 1.580 N09 J0T 28
J0T N10 N2 N 0 1 Y N N N N N -15.555 7.784 -2.583 -5.862 -1.012 1.836 N10 J0T 29
J0T N11 N3 N 0 1 Y N N N N N -16.433 7.954 -1.550 -4.877 -0.799 1.037 N11 J0T 30
J0T N28 N4 N 0 1 Y N N N N N -26.242 9.725 0.348 5.331 -0.581 -0.383 N28 J0T 31
J0T N29 N5 N 0 1 Y N N N N N -26.956 10.886 0.305 5.537 0.133 -1.433 N29 J0T 32
J0T N32 N6 N 0 1 Y N N N N N -27.864 10.849 1.211 6.681 0.716 -1.363 N32 J0T 33
J0T O18 O1 O 0 1 N N N N N N -20.509 7.639 -0.677 -1.287 -2.409 -0.371 O18 J0T 34
J0T O19 O2 O 0 1 N N N N N N -18.140 6.807 0.550 -3.968 -2.112 -1.285 O19 J0T 35
J0T O21 O3 O 0 1 N N N N N N -21.776 5.129 -0.507 -1.112 -5.186 -1.094 O21 J0T 36
J0T O22 O4 O 0 1 N N N N N N -18.219 10.044 -2.134 -2.359 0.450 1.661 O22 J0T 37
J0T O26 O5 O 0 1 N N N N N N -23.357 9.237 1.103 2.743 -0.026 -1.552 O26 J0T 38
J0T S23 S1 S 0 1 N N N N N N -21.093 10.162 -0.826 0.185 -0.241 0.080 S23 J0T 39
J0T H1 H1 H 0 1 N N N N N N -11.886 8.759 -1.750 -5.770 2.222 -1.478 H1 J0T 40
J0T H2 H2 H 0 1 N N N N N N -9.882 9.195 2.039 -9.381 4.482 -1.646 H2 J0T 41
J0T H3 H3 H 0 1 N N N N N N -16.094 8.474 0.560 -4.598 0.641 -0.576 H3 J0T 42
J0T H4 H4 H 0 1 N N N N N N -17.855 5.665 -1.189 -4.434 -3.371 0.285 H4 J0T 43
J0T H5 H5 H 0 1 N N N N N N -18.110 7.591 -2.703 -3.422 -1.947 2.023 H5 J0T 44
J0T H6 H6 H 0 1 N N N N N N -18.504 9.311 -0.201 -2.677 -0.112 -0.303 H6 J0T 45
J0T H7 H7 H 0 1 N N N N N N -23.111 10.155 -2.081 1.544 -2.149 -0.477 H7 J0T 46
J0T H8 H8 H 0 1 N N N N N N -22.758 8.551 -1.355 1.771 -1.651 1.217 H8 J0T 47
J0T H9 H9 H 0 1 N N N N N N -29.300 6.974 5.443 10.690 0.433 2.915 H9 J0T 48
J0T H10 H10 H 0 1 N N N N N N -14.110 8.304 1.871 -8.974 1.357 1.232 H10 J0T 49
J0T H11 H11 H 0 1 N N N N N N -9.843 9.162 -0.466 -7.117 4.015 -2.488 H11 J0T 50
J0T H12 H12 H 0 1 N N N N N N -20.078 6.213 -2.149 -2.091 -3.810 0.918 H12 J0T 51
J0T H13 H13 H 0 1 N N N N N N -20.404 8.640 -2.547 -0.926 -1.776 1.565 H13 J0T 52
J0T H14 H14 H 0 1 N N N N N N -19.863 4.366 -0.396 -3.170 -5.127 -0.931 H14 J0T 53
J0T H15 H15 H 0 1 N N N N N N -20.302 5.563 0.869 -2.462 -3.993 -2.105 H15 J0T 54
J0T H16 H16 H 0 1 N N N N N N -23.819 11.012 0.119 3.006 0.361 0.460 H16 J0T 55
J0T H17 H17 H 0 1 N N N N N N -25.325 9.764 -1.512 4.199 -1.808 0.887 H17 J0T 56
J0T H18 H18 H 0 1 N N N N N N -25.048 8.280 -0.539 4.062 -2.185 -0.847 H18 J0T 57
J0T H19 H19 H 0 1 N N N N N N -26.486 7.933 1.632 6.547 -0.945 1.389 H19 J0T 58
J0T H20 H20 H 0 1 N N N N N N -30.107 10.977 2.702 9.020 2.013 -1.451 H20 J0T 59
J0T H21 H21 H 0 1 N N N N N N -31.306 8.372 5.929 12.057 1.954 1.547 H21 J0T 60
J0T H22 H22 H 0 1 N N N N N N -27.775 7.533 3.622 8.486 -0.306 2.111 H22 J0T 61
J0T H23 H23 H 0 1 N N N N N N -18.444 6.060 1.052 -4.018 -2.772 -1.990 H23 J0T 62
J0T H24 H24 H 0 1 N N N N N N -22.142 4.432 0.025 -1.062 -5.895 -1.750 H24 J0T 63
J0T H25 H25 H 0 1 N N N N N N -18.671 10.862 -1.962 -1.657 1.093 1.490 H25 J0T 64
J0T H26 H26 H 0 1 N N N N N N -23.971 9.419 1.805 2.638 -0.733 -2.204 H26 J0T 65
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
J0T N10 N09 DOUB Y N 1
J0T N10 N11 SING Y N 2
J0T N09 C08 SING Y N 3
J0T O22 C16 SING N N 4
J0T C15 N11 SING N N 5
J0T C15 C16 SING N N 6
J0T C15 C14 SING N N 7
J0T N11 C12 SING Y N 8
J0T C17 C16 SING N N 9
J0T C17 S23 SING N N 10
J0T C17 O18 SING N N 11
J0T C24 S23 SING N N 12
J0T C24 C25 SING N N 13
J0T C13 C14 SING N N 14
J0T C13 O18 SING N N 15
J0T C13 C20 SING N N 16
J0T C14 O19 SING N N 17
J0T C08 C12 DOUB Y N 18
J0T C08 C02 SING N N 19
J0T C03 C02 DOUB Y N 20
J0T C03 C04 SING Y N 21
J0T O21 C20 SING N N 22
J0T C27 C25 SING N N 23
J0T C27 N28 SING N N 24
J0T C02 C01 SING Y N 25
J0T C25 O26 SING N N 26
J0T C04 C05 DOUB Y N 27
J0T N29 N28 SING Y N 28
J0T N29 N32 DOUB Y N 29
J0T N28 C31 SING Y N 30
J0T N32 C30 SING Y N 31
J0T C01 C06 DOUB Y N 32
J0T C31 C30 DOUB Y N 33
J0T C05 C06 SING Y N 34
J0T C30 C33 SING N N 35
J0T C06 F07 SING N N 36
J0T C33 C34 DOUB Y N 37
J0T C33 C38 SING Y N 38
J0T C34 C35 SING Y N 39
J0T C38 C37 DOUB Y N 40
J0T C35 F39 SING N N 41
J0T C35 C36 DOUB Y N 42
J0T C37 C36 SING Y N 43
J0T C03 H1 SING N N 44
J0T C05 H2 SING N N 45
J0T C12 H3 SING N N 46
J0T C14 H4 SING N N 47
J0T C15 H5 SING N N 48
J0T C16 H6 SING N N 49
J0T C24 H7 SING N N 50
J0T C24 H8 SING N N 51
J0T C37 H9 SING N N 52
J0T C01 H10 SING N N 53
J0T C04 H11 SING N N 54
J0T C13 H12 SING N N 55
J0T C17 H13 SING N N 56
J0T C20 H14 SING N N 57
J0T C20 H15 SING N N 58
J0T C25 H16 SING N N 59
J0T C27 H17 SING N N 60
J0T C27 H18 SING N N 61
J0T C31 H19 SING N N 62
J0T C34 H20 SING N N 63
J0T C36 H21 SING N N 64
J0T C38 H22 SING N N 65
J0T O19 H23 SING N N 66
J0T O21 H24 SING N N 67
J0T O22 H25 SING N N 68
J0T O26 H26 SING N N 69
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
J0T InChI InChI 1.03 InChI=1S/C25H26F2N6O5S/c26-16-5-1-3-14(7-16)19-10-32(30-28-19)9-18(35)13-39-25-24(37)22(23(36)21(12-34)38-25)33-11-20(29-31-33)15-4-2-6-17(27)8-15/h1-8,10-11,18,21-25,34-37H,9,12-13H2/t18-,21-,22+,23+,24-,25+/m1/s1
J0T InChIKey InChI 1.03 QSKQHLBUOMOHKU-LAMOWGQJSA-N
J0T SMILES_CANONICAL CACTVS 3.385 OC[C@H]1O[C@@H](SC[C@H](O)Cn2cc(nn2)c3cccc(F)c3)[C@H](O)[C@H]([C@H]1O)n4cc(nn4)c5cccc(F)c5
J0T SMILES CACTVS 3.385 OC[CH]1O[CH](SC[CH](O)Cn2cc(nn2)c3cccc(F)c3)[CH](O)[CH]([CH]1O)n4cc(nn4)c5cccc(F)c5
J0T SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 c1cc(cc(c1)F)c2cn(nn2)C[C@H](CS[C@H]3[C@@H]([C@H]([C@H]([C@H](O3)CO)O)n4cc(nn4)c5cccc(c5)F)O)O
J0T SMILES "OpenEye OEToolkits" 2.0.6 c1cc(cc(c1)F)c2cn(nn2)CC(CSC3C(C(C(C(O3)CO)O)n4cc(nn4)c5cccc(c5)F)O)O
#
_pdbx_chem_comp_identifier.comp_id J0T
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.6
_pdbx_chem_comp_identifier.identifier
(2~{S},3~{R},4~{S},5~{R},6~{R})-4-[4-(3-fluorophenyl)-1,2,3-triazol-1-yl]-2-[(2~{R})-3-[4-(3-fluorophenyl)-1,2,3-triazol-1-yl]-2-oxidanyl-propyl]sulfanyl-6-(hydroxymethyl)oxane-3,5-diol
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
J0T 'Create component' 2019-01-11 EBI
J0T 'Initial release' 2019-01-23 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
J0T C02 C 6.865 -7.926 1
J0T C03 C 7.475 -9.296 2
J0T C05 C 5.102 -10.353 3
J0T C06 C 4.492 -8.983 4
J0T C08 C 7.747 -6.713 5
J0T C12 C 7.283 -5.286 6
J0T C14 C 7.198 -2.154 7
J0T C15 C 8.497 -2.904 8
J0T C16 C 9.796 -2.154 9
J0T C24 C 11.095 1.596 10
J0T C33 C 15.927 7.769 11
J0T C35 C 18.029 9.296 12
J0T C37 C 15.656 10.353 13
J0T C01 C 5.373 -7.769 14
J0T C04 C 6.594 -10.510 15
J0T C13 C 7.198 -0.654 16
J0T C17 C 9.796 -0.654 17
J0T C20 C 5.899 0.096 18
J0T C25 C 12.394 2.346 19
J0T C27 C 12.394 3.845 20
J0T C30 C 15.317 6.399 21
J0T C31 C 13.850 6.087 22
J0T C34 C 17.419 7.926 23
J0T C36 C 17.147 10.510 24
J0T C38 C 15.046 8.983 25
J0T F07 F 3.000 -8.826 26
J0T F39 F 19.521 9.454 27
J0T N09 N 9.247 -6.713 28
J0T N10 N 9.710 -5.286 29
J0T N11 N 8.497 -4.404 30
J0T N28 N 13.693 4.596 31
J0T N29 N 15.063 3.985 32
J0T N32 N 16.067 5.100 33
J0T O18 O 8.497 0.096 34
J0T O19 O 5.899 -2.904 35
J0T O21 O 5.899 1.596 36
J0T O22 O 11.095 -2.904 37
J0T O26 O 13.693 1.596 38
J0T S23 S 11.095 0.096 39
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
J0T N10 N09 DOUBLE NONE 1
J0T N10 N11 SINGLE NONE 2
J0T N09 C08 SINGLE NONE 3
J0T C16 O22 SINGLE BEGINDASH 4
J0T C15 N11 SINGLE BEGINWEDGE 5
J0T C15 C16 SINGLE NONE 6
J0T C15 C14 SINGLE NONE 7
J0T N11 C12 SINGLE NONE 8
J0T C17 C16 SINGLE NONE 9
J0T C17 S23 SINGLE BEGINWEDGE 10
J0T C17 O18 SINGLE NONE 11
J0T C24 S23 SINGLE NONE 12
J0T C24 C25 SINGLE NONE 13
J0T C13 C14 SINGLE NONE 14
J0T C13 O18 SINGLE NONE 15
J0T C13 C20 SINGLE BEGINWEDGE 16
J0T C14 O19 SINGLE BEGINWEDGE 17
J0T C08 C12 DOUBLE NONE 18
J0T C08 C02 SINGLE NONE 19
J0T C03 C02 DOUBLE NONE 20
J0T C03 C04 SINGLE NONE 21
J0T O21 C20 SINGLE NONE 22
J0T C27 C25 SINGLE NONE 23
J0T C27 N28 SINGLE NONE 24
J0T C02 C01 SINGLE NONE 25
J0T C25 O26 SINGLE BEGINWEDGE 26
J0T C04 C05 DOUBLE NONE 27
J0T N29 N28 SINGLE NONE 28
J0T N29 N32 DOUBLE NONE 29
J0T N28 C31 SINGLE NONE 30
J0T N32 C30 SINGLE NONE 31
J0T C01 C06 DOUBLE NONE 32
J0T C31 C30 DOUBLE NONE 33
J0T C05 C06 SINGLE NONE 34
J0T C30 C33 SINGLE NONE 35
J0T C06 F07 SINGLE NONE 36
J0T C33 C34 SINGLE NONE 37
J0T C33 C38 DOUBLE NONE 38
J0T C34 C35 DOUBLE NONE 39
J0T C38 C37 SINGLE NONE 40
J0T C35 F39 SINGLE NONE 41
J0T C35 C36 SINGLE NONE 42
J0T C37 C36 DOUBLE NONE 43
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
J0T MurckoScaffold S1 scaffold 'c1ccc(-c2cn(CCCS[C@H]3C[C@@H](n4cc(-c5ccccc5)nn4)CCO3)nn2)cc1' InChI=1S/C24H26N6OS/c1-3-8-19(9-4-1)22-17-29(27-25-22)13-7-15-32-24-16-21(12-14-31-24)30-18-23(26-28-30)20-10-5-2-6-11-20/h1-6,8-11,17-18,21,24H,7,12-16H2/t21-,24-/m0/s1 WAWPRRDRULUMHT-URXFXBBRSA-N
J0T phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
J0T C02 S1 1
J0T C03 S1 1
J0T C05 S1 1
J0T C06 S1 1
J0T C08 S1 1
J0T C12 S1 1
J0T C14 S1 1
J0T C15 S1 1
J0T C16 S1 1
J0T C24 S1 1
J0T C33 S1 1
J0T C35 S1 1
J0T C37 S1 1
J0T C01 S1 1
J0T C04 S1 1
J0T C13 S1 1
J0T C17 S1 1
J0T C25 S1 1
J0T C27 S1 1
J0T C30 S1 1
J0T C31 S1 1
J0T C34 S1 1
J0T C36 S1 1
J0T C38 S1 1
J0T N09 S1 1
J0T N10 S1 1
J0T N11 S1 1
J0T N28 S1 1
J0T N29 S1 1
J0T N32 S1 1
J0T O18 S1 1
J0T S23 S1 1
J0T C02 F1 1
J0T C03 F1 1
J0T C04 F1 1
J0T C05 F1 1
J0T C06 F1 1
J0T C01 F1 1
J0T C33 F1 2
J0T C34 F1 2
J0T C35 F1 2
J0T C36 F1 2
J0T C37 F1 2
J0T C38 F1 2
#
_pdbe_chem_comp_rdkit_properties.comp_id J0T
_pdbe_chem_comp_rdkit_properties.exactmw 560.165
_pdbe_chem_comp_rdkit_properties.amw 560.583
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 11
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 4
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 13
_pdbe_chem_comp_rdkit_properties.NumHBD 4
_pdbe_chem_comp_rdkit_properties.NumHBA 12
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 39
_pdbe_chem_comp_rdkit_properties.NumAtoms 65
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 14
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.360
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 6
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 262.093
_pdbe_chem_comp_rdkit_properties.tpsa 151.570
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.496
_pdbe_chem_comp_rdkit_properties.CrippenMR 133.450
_pdbe_chem_comp_rdkit_properties.chi0v 19.205
_pdbe_chem_comp_rdkit_properties.chi1v 10.719
_pdbe_chem_comp_rdkit_properties.chi2v 5.061
_pdbe_chem_comp_rdkit_properties.chi3v 5.061
_pdbe_chem_comp_rdkit_properties.chi4v 3.287
_pdbe_chem_comp_rdkit_properties.chi0n 44.389
_pdbe_chem_comp_rdkit_properties.chi1n 22.536
_pdbe_chem_comp_rdkit_properties.chi2n 4.319
_pdbe_chem_comp_rdkit_properties.chi3n 4.319
_pdbe_chem_comp_rdkit_properties.chi4n 2.741
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.270
_pdbe_chem_comp_rdkit_properties.kappa1 9.975
_pdbe_chem_comp_rdkit_properties.kappa2 11.856
_pdbe_chem_comp_rdkit_properties.kappa3 6.158
_pdbe_chem_comp_rdkit_properties.Phi 3.032
#
_pdbe_chem_comp_external_mappings.comp_id J0T
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PubChem
_pdbe_chem_comp_external_mappings.resource_id 137319681
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
J0T C02 -7.217 0.330 0.914 ETKDGv3 1
J0T C03 -6.906 1.437 1.620 ETKDGv3 2
J0T C05 -9.257 1.929 2.061 ETKDGv3 3
J0T C06 -9.611 0.719 1.294 ETKDGv3 4
J0T C08 -6.177 -0.532 0.302 ETKDGv3 5
J0T C12 -4.862 -0.334 0.293 ETKDGv3 6
J0T C14 -2.806 -0.750 -2.303 ETKDGv3 7
J0T C15 -2.936 -1.525 -0.978 ETKDGv3 8
J0T C16 -1.876 -1.044 0.014 ETKDGv3 9
J0T C24 2.266 -1.082 -0.399 ETKDGv3 10
J0T C33 7.422 1.096 -0.090 ETKDGv3 11
J0T C35 9.663 0.258 -0.648 ETKDGv3 12
J0T C37 9.027 2.526 -1.275 ETKDGv3 13
J0T C01 -8.648 -0.038 0.751 ETKDGv3 14
J0T C04 -7.973 2.269 2.215 ETKDGv3 15
J0T C13 -1.308 -0.513 -2.686 ETKDGv3 16
J0T C17 -0.470 -1.320 -0.574 ETKDGv3 17
J0T C20 -0.828 0.957 -2.707 ETKDGv3 18
J0T C25 2.881 -1.875 0.767 ETKDGv3 19
J0T C27 3.333 -0.979 1.938 ETKDGv3 20
J0T C30 6.092 0.867 0.523 ETKDGv3 21
J0T C31 5.652 -0.255 1.083 ETKDGv3 22
J0T C34 8.466 0.034 -0.089 ETKDGv3 23
J0T C36 9.956 1.564 -1.270 ETKDGv3 24
J0T C38 7.706 2.284 -0.660 ETKDGv3 25
J0T F07 -10.914 0.376 1.139 ETKDGv3 26
J0T F39 10.609 -0.713 -0.644 ETKDGv3 27
J0T N09 -6.464 -1.726 -0.430 ETKDGv3 28
J0T N10 -5.363 -2.207 -0.846 ETKDGv3 29
J0T N11 -4.290 -1.418 -0.427 ETKDGv3 30
J0T N28 4.325 0.002 1.508 ETKDGv3 31
J0T N29 4.038 1.315 1.133 ETKDGv3 32
J0T N32 5.047 1.844 0.569 ETKDGv3 33
J0T O18 -0.399 -1.364 -1.997 ETKDGv3 34
J0T O19 -3.515 0.463 -2.234 ETKDGv3 35
J0T O21 -1.131 1.622 -1.513 ETKDGv3 36
J0T O22 -2.032 -1.725 1.233 ETKDGv3 37
J0T O26 1.953 -2.822 1.228 ETKDGv3 38
J0T S23 0.768 -0.149 0.105 ETKDGv3 39
J0T H1 -5.881 1.744 1.771 ETKDGv3 40
J0T H2 -10.037 2.538 2.498 ETKDGv3 41
J0T H3 -4.315 0.496 0.717 ETKDGv3 42
J0T H4 -3.277 -1.394 -3.085 ETKDGv3 43
J0T H5 -2.739 -2.602 -1.185 ETKDGv3 44
J0T H6 -2.016 0.047 0.185 ETKDGv3 45
J0T H7 2.040 -1.778 -1.234 ETKDGv3 46
J0T H8 3.009 -0.358 -0.793 ETKDGv3 47
J0T H9 9.241 3.484 -1.730 ETKDGv3 48
J0T H10 -8.924 -0.923 0.191 ETKDGv3 49
J0T H11 -7.711 3.156 2.778 ETKDGv3 50
J0T H12 -1.234 -0.826 -3.751 ETKDGv3 51
J0T H13 -0.179 -2.334 -0.225 ETKDGv3 52
J0T H14 0.271 0.978 -2.881 ETKDGv3 53
J0T H15 -1.317 1.488 -3.555 ETKDGv3 54
J0T H16 3.777 -2.406 0.367 ETKDGv3 55
J0T H17 2.464 -0.456 2.390 ETKDGv3 56
J0T H18 3.784 -1.615 2.729 ETKDGv3 57
J0T H19 6.169 -1.199 1.185 ETKDGv3 58
J0T H20 8.275 -0.930 0.362 ETKDGv3 59
J0T H21 10.924 1.742 -1.721 ETKDGv3 60
J0T H22 6.975 3.083 -0.681 ETKDGv3 61
J0T H23 -3.713 0.734 -3.169 ETKDGv3 62
J0T H24 -0.770 2.541 -1.610 ETKDGv3 63
J0T H25 -1.500 -1.228 1.909 ETKDGv3 64
J0T H26 2.464 -3.504 1.737 ETKDGv3 65
#