data_IVN
#
_chem_comp.id IVN
_chem_comp.name
"(2~{R})-2-azanyl-3-[4-[2-azanyl-6-[(1~{R})-1-[4-chloranyl-2-(3-methylpyrazol-1-yl)phenyl]-2,2,2-tris(fluoranyl)ethoxy]pyrimidin-4-yl]phenyl]propanoic acid"
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C25 H22 Cl F3 N6 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2022-04-14
_chem_comp.pdbx_modified_date 2022-09-02
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 546.929
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code IVN
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7ZIK
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBE
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
IVN C4 C1 C 0 1 Y N N N N N 8.934 1.552 19.684 -2.084 0.860 -0.348 C4 IVN 1
IVN C5 C2 C 0 1 Y N N N N N 8.361 1.454 20.946 -1.101 -0.074 -0.031 C5 IVN 2
IVN C6 C3 C 0 1 Y N N N N N 7.353 0.513 21.145 0.213 0.367 0.104 C6 IVN 3
IVN N1 N1 N 0 1 Y N N N N N 6.960 -0.263 20.125 0.484 1.655 -0.073 N1 IVN 4
IVN N3 N2 N 0 1 Y N N N N N 8.501 0.753 18.701 -1.736 2.137 -0.511 N3 IVN 5
IVN O O1 O 0 1 N N N N N N 15.377 6.069 17.658 -10.618 -0.473 0.123 O IVN 6
IVN C C4 C 0 1 N N N N N N 15.237 6.078 18.900 -9.684 -1.231 0.241 C IVN 7
IVN OXT O2 O 0 1 N N N N N N 15.969 6.676 19.719 -9.894 -2.557 0.251 OXT IVN 8
IVN CA C5 C 0 1 N N R N N N 14.060 5.283 19.470 -8.285 -0.688 0.378 CA IVN 9
IVN N N3 N 0 1 N N N N N N 14.533 3.966 19.918 -8.344 0.713 0.814 N IVN 10
IVN CB C6 C 0 1 N N N N N N 12.985 5.157 18.389 -7.571 -0.772 -0.972 CB IVN 11
IVN CG C7 C 0 1 Y N N N N N 11.971 4.270 18.752 -6.135 -0.345 -0.809 CG IVN 12
IVN CD2 C8 C 0 1 Y N N N N N 11.217 4.455 19.908 -5.168 -1.284 -0.499 CD2 IVN 13
IVN CE2 C9 C 0 1 Y N N N N N 10.205 3.552 20.231 -3.852 -0.899 -0.349 CE2 IVN 14
IVN CD1 C10 C 0 1 Y N N N N N 11.701 3.190 17.923 -5.789 0.984 -0.975 CD1 IVN 15
IVN CE1 C11 C 0 1 Y N N N N N 10.692 2.291 18.242 -4.476 1.381 -0.827 CE1 IVN 16
IVN CZ C12 C 0 1 Y N N N N N 9.943 2.467 19.398 -3.497 0.440 -0.509 CZ IVN 17
IVN C2 C13 C 0 1 Y N N N N N 7.528 -0.144 18.916 -0.476 2.517 -0.374 C2 IVN 18
IVN NAB N4 N 0 1 N N N N N N 7.120 -0.926 17.920 -0.153 3.851 -0.550 NAB IVN 19
IVN OAX O3 O 0 1 N N N N N N 6.769 0.379 22.369 1.202 -0.506 0.413 OAX IVN 20
IVN CBJ C14 C 0 1 N N R N N N 5.965 -0.809 22.473 2.523 0.025 0.533 CBJ IVN 21
IVN CBL C15 C 0 1 N N N N N N 6.188 -1.461 23.847 2.769 0.456 1.981 CBL IVN 22
IVN F1 F1 F 0 1 N N N N N N 7.490 -1.670 24.033 4.062 0.977 2.099 F1 IVN 23
IVN F3 F2 F 0 1 N N N N N N 5.730 -0.658 24.802 1.837 1.436 2.341 F3 IVN 24
IVN F2 F3 F 0 1 N N N N N N 5.540 -2.644 23.916 2.633 -0.650 2.826 F2 IVN 25
IVN CBG C16 C 0 1 Y N N N N N 4.620 -0.464 22.308 3.527 -1.030 0.146 CBG IVN 26
IVN CAP C17 C 0 1 Y N N N N N 4.265 0.868 22.510 3.206 -2.367 0.269 CAP IVN 27
IVN CAJ C18 C 0 1 Y N N N N N 2.951 1.289 22.367 4.126 -3.337 -0.086 CAJ IVN 28
IVN CBB C19 C 0 1 Y N N N N N 1.976 0.370 22.015 5.371 -2.970 -0.566 CBB IVN 29
IVN CL1 CL1 CL 0 0 N N N N N N 0.348 0.882 21.835 6.523 -4.189 -1.011 CL1 IVN 30
IVN CAR C20 C 0 1 Y N N N N N 2.317 -0.962 21.813 5.697 -1.632 -0.693 CAR IVN 31
IVN CBH C21 C 0 1 Y N N N N N 3.634 -1.392 21.946 4.773 -0.658 -0.342 CBH IVN 32
IVN NBK N5 N 0 1 Y N N N N N 3.881 -2.691 21.745 5.100 0.699 -0.469 NBK IVN 33
IVN NAW N6 N 0 1 Y N N N N N 3.392 -3.569 22.455 4.315 1.682 -1.086 NAW IVN 34
IVN CAZ C22 C 0 1 Y N N N N N 3.803 -4.754 22.022 4.952 2.823 -1.007 CAZ IVN 35
IVN CAA C23 C 0 1 N N N N N N 3.421 -6.102 22.643 4.467 4.145 -1.544 CAA IVN 36
IVN CAK C24 C 0 1 Y N N N N N 4.589 -4.587 20.972 6.162 2.604 -0.339 CAK IVN 37
IVN CAQ C25 C 0 1 Y N N N N N 4.632 -3.270 20.796 6.227 1.292 -0.014 CAQ IVN 38
IVN H1 H1 H 0 1 N N N N N N 8.689 2.092 21.753 -1.351 -1.115 0.108 H1 IVN 39
IVN H2 H2 H 0 1 N N N N N N 16.660 7.131 19.253 -10.809 -2.857 0.161 H2 IVN 40
IVN H3 H3 H 0 1 N N N N N N 13.641 5.835 20.324 -7.738 -1.276 1.116 H3 IVN 41
IVN H4 H4 H 0 1 N N N N N N 15.233 4.085 20.622 -8.847 1.279 0.147 H4 IVN 42
IVN H5 H5 H 0 1 N N N N N N 13.766 3.447 20.295 -8.753 0.789 1.733 H5 IVN 43
IVN H7 H7 H 0 1 N N N N N N 13.456 4.796 17.462 -7.606 -1.799 -1.338 H7 IVN 44
IVN H8 H8 H 0 1 N N N N N N 12.542 6.148 18.213 -8.067 -0.115 -1.687 H8 IVN 45
IVN H9 H9 H 0 1 N N N N N N 11.416 5.297 20.554 -5.444 -2.321 -0.375 H9 IVN 46
IVN H10 H10 H 0 1 N N N N N N 9.623 3.694 21.129 -3.097 -1.633 -0.106 H10 IVN 47
IVN H11 H11 H 0 1 N N N N N N 12.280 3.048 17.023 -6.548 1.712 -1.222 H11 IVN 48
IVN H12 H12 H 0 1 N N N N N N 10.490 1.454 17.590 -4.206 2.418 -0.956 H12 IVN 49
IVN H13 H13 H 0 1 N N N N N N 7.640 -0.712 17.093 -0.845 4.493 -0.771 H13 IVN 50
IVN H14 H14 H 0 1 N N N N N N 7.266 -1.884 18.167 0.767 4.144 -0.453 H14 IVN 51
IVN H15 H15 H 0 1 N N N N N N 6.269 -1.528 21.698 2.629 0.887 -0.125 H15 IVN 52
IVN H16 H16 H 0 1 N N N N N N 5.026 1.585 22.782 2.235 -2.657 0.645 H16 IVN 53
IVN H17 H17 H 0 1 N N N N N N 2.690 2.325 22.529 3.872 -4.382 0.012 H17 IVN 54
IVN H18 H18 H 0 1 N N N N N N 1.549 -1.674 21.549 6.667 -1.346 -1.072 H18 IVN 55
IVN H19 H19 H 0 1 N N N N N N 2.754 -5.935 23.502 3.889 4.659 -0.776 H19 IVN 56
IVN H20 H20 H 0 1 N N N N N N 2.904 -6.718 21.892 5.322 4.758 -1.827 H20 IVN 57
IVN H21 H21 H 0 1 N N N N N N 4.330 -6.621 22.980 3.838 3.973 -2.418 H21 IVN 58
IVN H22 H22 H 0 1 N N N N N N 5.085 -5.349 20.389 6.910 3.351 -0.118 H22 IVN 59
IVN H23 H23 H 0 1 N N N N N N 5.179 -2.754 20.021 7.036 0.805 0.510 H23 IVN 60
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
IVN O C DOUB N N 1
IVN NAB C2 SING N N 2
IVN CD1 CE1 DOUB Y N 3
IVN CD1 CG SING Y N 4
IVN CE1 CZ SING Y N 5
IVN CB CG SING N N 6
IVN CB CA SING N N 7
IVN N3 C2 DOUB Y N 8
IVN N3 C4 SING Y N 9
IVN CG CD2 DOUB Y N 10
IVN C CA SING N N 11
IVN C OXT SING N N 12
IVN C2 N1 SING Y N 13
IVN CZ C4 SING N N 14
IVN CZ CE2 DOUB Y N 15
IVN CA N SING N N 16
IVN C4 C5 DOUB Y N 17
IVN CD2 CE2 SING Y N 18
IVN N1 C6 DOUB Y N 19
IVN CAQ CAK DOUB Y N 20
IVN CAQ NBK SING Y N 21
IVN C5 C6 SING Y N 22
IVN CAK CAZ SING Y N 23
IVN C6 OAX SING N N 24
IVN NBK CBH SING N N 25
IVN NBK NAW SING Y N 26
IVN CAR CBH DOUB Y N 27
IVN CAR CBB SING Y N 28
IVN CL1 CBB SING N N 29
IVN CBH CBG SING Y N 30
IVN CBB CAJ DOUB Y N 31
IVN CAZ NAW DOUB Y N 32
IVN CAZ CAA SING N N 33
IVN CBG CBJ SING N N 34
IVN CBG CAP DOUB Y N 35
IVN CAJ CAP SING Y N 36
IVN OAX CBJ SING N N 37
IVN CBJ CBL SING N N 38
IVN CBL F2 SING N N 39
IVN CBL F1 SING N N 40
IVN CBL F3 SING N N 41
IVN C5 H1 SING N N 42
IVN OXT H2 SING N N 43
IVN CA H3 SING N N 44
IVN N H4 SING N N 45
IVN N H5 SING N N 46
IVN CB H7 SING N N 47
IVN CB H8 SING N N 48
IVN CD2 H9 SING N N 49
IVN CE2 H10 SING N N 50
IVN CD1 H11 SING N N 51
IVN CE1 H12 SING N N 52
IVN NAB H13 SING N N 53
IVN NAB H14 SING N N 54
IVN CBJ H15 SING N N 55
IVN CAP H16 SING N N 56
IVN CAJ H17 SING N N 57
IVN CAR H18 SING N N 58
IVN CAA H19 SING N N 59
IVN CAA H20 SING N N 60
IVN CAA H21 SING N N 61
IVN CAK H22 SING N N 62
IVN CAQ H23 SING N N 63
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
IVN InChI InChI 1.06 InChI=1S/C25H22ClF3N6O3/c1-13-8-9-35(34-13)20-11-16(26)6-7-17(20)22(25(27,28)29)38-21-12-19(32-24(31)33-21)15-4-2-14(3-5-15)10-18(30)23(36)37/h2-9,11-12,18,22H,10,30H2,1H3,(H,36,37)(H2,31,32,33)/t18-,22-/m1/s1
IVN InChIKey InChI 1.06 NCLGDOBQAWBXRA-XMSQKQJNSA-N
IVN SMILES_CANONICAL CACTVS 3.385 Cc1ccn(n1)c2cc(Cl)ccc2[C@@H](Oc3cc(nc(N)n3)c4ccc(C[C@@H](N)C(O)=O)cc4)C(F)(F)F
IVN SMILES CACTVS 3.385 Cc1ccn(n1)c2cc(Cl)ccc2[CH](Oc3cc(nc(N)n3)c4ccc(C[CH](N)C(O)=O)cc4)C(F)(F)F
IVN SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 Cc1ccn(n1)c2cc(ccc2[C@H](C(F)(F)F)Oc3cc(nc(n3)N)c4ccc(cc4)C[C@H](C(=O)O)N)Cl
IVN SMILES "OpenEye OEToolkits" 2.0.7 Cc1ccn(n1)c2cc(ccc2C(C(F)(F)F)Oc3cc(nc(n3)N)c4ccc(cc4)CC(C(=O)O)N)Cl
#
_pdbx_chem_comp_identifier.comp_id IVN
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier
"(2~{R})-2-azanyl-3-[4-[2-azanyl-6-[(1~{R})-1-[4-chloranyl-2-(3-methylpyrazol-1-yl)phenyl]-2,2,2-tris(fluoranyl)ethoxy]pyrimidin-4-yl]phenyl]propanoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
IVN 'Create component' 2022-04-14 PDBE
IVN 'Modify descriptor' 2022-08-22 RCSB
IVN 'Initial release' 2022-09-07 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
IVN C4 C 10.794 -1.643 1
IVN C5 C 10.794 -0.142 2
IVN C6 C 12.093 0.608 3
IVN N1 N 13.392 -0.142 4
IVN N3 N 12.093 -2.393 5
IVN O O 4.299 -8.393 6
IVN C C 4.299 -6.893 7
IVN OXT O 3.000 -6.143 8
IVN CA C 5.598 -6.143 9
IVN N N 6.897 -6.893 10
IVN CB C 5.598 -4.643 11
IVN CG C 6.897 -3.893 12
IVN CD2 C 8.196 -4.643 13
IVN CE2 C 9.495 -3.893 14
IVN CD1 C 6.897 -2.393 15
IVN CE1 C 8.196 -1.643 16
IVN CZ C 9.495 -2.393 17
IVN C2 C 13.392 -1.643 18
IVN NAB N 14.691 -2.393 19
IVN OAX O 12.093 2.107 20
IVN CBJ C 13.392 2.857 21
IVN CBL C 14.691 2.107 22
IVN F1 F 13.941 0.808 23
IVN F3 F 15.441 3.406 24
IVN F2 F 15.990 1.357 25
IVN CBG C 13.392 4.357 26
IVN CAP C 14.691 5.107 27
IVN CAJ C 14.691 6.607 28
IVN CBB C 13.392 7.357 29
IVN CL1 Cl 13.392 8.857 30
IVN CAR C 12.093 6.607 31
IVN CBH C 12.093 5.107 32
IVN NBK N 10.794 4.357 33
IVN NAW N 10.637 2.866 34
IVN CAZ C 9.170 2.554 35
IVN CAA C 8.560 1.183 36
IVN CAK C 8.420 3.853 37
IVN CAQ C 9.424 4.968 38
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
IVN O C DOUBLE NONE 1
IVN NAB C2 SINGLE NONE 2
IVN CD1 CE1 SINGLE NONE 3
IVN CD1 CG DOUBLE NONE 4
IVN CE1 CZ DOUBLE NONE 5
IVN CB CG SINGLE NONE 6
IVN CB CA SINGLE NONE 7
IVN N3 C2 DOUBLE NONE 8
IVN N3 C4 SINGLE NONE 9
IVN CG CD2 SINGLE NONE 10
IVN C CA SINGLE NONE 11
IVN C OXT SINGLE NONE 12
IVN C2 N1 SINGLE NONE 13
IVN CZ C4 SINGLE NONE 14
IVN CZ CE2 SINGLE NONE 15
IVN CA N SINGLE BEGINWEDGE 16
IVN C4 C5 DOUBLE NONE 17
IVN CD2 CE2 DOUBLE NONE 18
IVN N1 C6 DOUBLE NONE 19
IVN CAQ CAK DOUBLE NONE 20
IVN CAQ NBK SINGLE NONE 21
IVN C5 C6 SINGLE NONE 22
IVN CAK CAZ SINGLE NONE 23
IVN C6 OAX SINGLE NONE 24
IVN NBK CBH SINGLE NONE 25
IVN NBK NAW SINGLE NONE 26
IVN CAR CBH DOUBLE NONE 27
IVN CAR CBB SINGLE NONE 28
IVN CL1 CBB SINGLE NONE 29
IVN CBH CBG SINGLE NONE 30
IVN CBB CAJ DOUBLE NONE 31
IVN CAZ NAW DOUBLE NONE 32
IVN CAZ CAA SINGLE NONE 33
IVN CBG CBJ SINGLE NONE 34
IVN CBG CAP DOUBLE NONE 35
IVN CAJ CAP SINGLE NONE 36
IVN CBJ OAX SINGLE BEGINDASH 37
IVN CBJ CBL SINGLE NONE 38
IVN CBL F2 SINGLE NONE 39
IVN CBL F1 SINGLE NONE 40
IVN CBL F3 SINGLE NONE 41
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
IVN MurckoScaffold S1 scaffold c1ccc(-c2cc(OCc3ccccc3-n3cccn3)ncn2)cc1 InChI=1S/C20H16N4O/c1-2-7-16(8-3-1)18-13-20(22-15-21-18)25-14-17-9-4-5-10-19(17)24-12-6-11-23-24/h1-13,15H,14H2 WWPDFWMVMIIDRL-UHFFFAOYSA-N
IVN peptide F1 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
IVN phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
IVN pyrazole F3 fragment 'c1cn[nH]c1' InChI=1S/C3H4N2/c1-2-4-5-3-1/h1-3H,(H,4,5) WTKZEGDFNFYCGP-UHFFFAOYSA-N
IVN pyrimidine F4 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
IVN Z104479788 F5 fragment CC(O)c1ccc(Cl)cc1 InChI=1S/C8H9ClO/c1-6(10)7-2-4-8(9)5-3-7/h2-6,10H,1H3 MVOSNPUNXINWAD-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
IVN C4 S1 1
IVN C5 S1 1
IVN C6 S1 1
IVN N1 S1 1
IVN N3 S1 1
IVN CG S1 1
IVN CD2 S1 1
IVN CE2 S1 1
IVN CD1 S1 1
IVN CE1 S1 1
IVN CZ S1 1
IVN C2 S1 1
IVN OAX S1 1
IVN CBJ S1 1
IVN CBG S1 1
IVN CAP S1 1
IVN CAJ S1 1
IVN CBB S1 1
IVN CAR S1 1
IVN CBH S1 1
IVN NBK S1 1
IVN NAW S1 1
IVN CAZ S1 1
IVN CAK S1 1
IVN CAQ S1 1
IVN O F1 1
IVN C F1 1
IVN CA F1 1
IVN N F1 1
IVN CG F2 1
IVN CD1 F2 1
IVN CE1 F2 1
IVN CZ F2 1
IVN CE2 F2 1
IVN CD2 F2 1
IVN CBG F2 2
IVN CBH F2 2
IVN CAR F2 2
IVN CBB F2 2
IVN CAJ F2 2
IVN CAP F2 2
IVN CAZ F3 1
IVN CAK F3 1
IVN CAQ F3 1
IVN NBK F3 1
IVN NAW F3 1
IVN C5 F4 1
IVN C4 F4 1
IVN N3 F4 1
IVN C2 F4 1
IVN N1 F4 1
IVN C6 F4 1
IVN CBL F5 1
IVN CBJ F5 1
IVN OAX F5 1
IVN CBG F5 1
IVN CBH F5 1
IVN CAR F5 1
IVN CBB F5 1
IVN CL1 F5 1
IVN CAJ F5 1
IVN CAP F5 1
#
_pdbe_chem_comp_rdkit_properties.comp_id IVN
_pdbe_chem_comp_rdkit_properties.exactmw 546.139
_pdbe_chem_comp_rdkit_properties.amw 546.937
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 11
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 9
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 38
_pdbe_chem_comp_rdkit_properties.NumAtoms 60
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 13
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.200
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 250.616
_pdbe_chem_comp_rdkit_properties.tpsa 142.170
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.933
_pdbe_chem_comp_rdkit_properties.CrippenMR 129.716
_pdbe_chem_comp_rdkit_properties.chi0v 18.676
_pdbe_chem_comp_rdkit_properties.chi1v 9.913
_pdbe_chem_comp_rdkit_properties.chi2v 4.264
_pdbe_chem_comp_rdkit_properties.chi3v 4.264
_pdbe_chem_comp_rdkit_properties.chi4v 2.746
_pdbe_chem_comp_rdkit_properties.chi0n 39.920
_pdbe_chem_comp_rdkit_properties.chi1n 20.232
_pdbe_chem_comp_rdkit_properties.chi2n 4.075
_pdbe_chem_comp_rdkit_properties.chi3n 4.075
_pdbe_chem_comp_rdkit_properties.chi4n 2.609
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.160
_pdbe_chem_comp_rdkit_properties.kappa1 10.541
_pdbe_chem_comp_rdkit_properties.kappa2 10.677
_pdbe_chem_comp_rdkit_properties.kappa3 6.209
_pdbe_chem_comp_rdkit_properties.Phi 2.962
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
IVN UniChem ZINC ZINC000114216631
IVN UniChem PubChem 124561875
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
IVN C4 0.764 0.452 1.779 ETKDGv3 1
IVN C5 -0.210 -0.427 1.479 ETKDGv3 2
IVN C6 -1.548 -0.258 2.098 ETKDGv3 3
IVN N1 -1.746 0.735 2.914 ETKDGv3 4
IVN N3 0.471 1.535 2.680 ETKDGv3 5
IVN O 4.107 -0.175 -3.310 ETKDGv3 6
IVN C 5.243 -0.453 -2.841 ETKDGv3 7
IVN OXT 5.764 -1.734 -2.997 ETKDGv3 8
IVN CA 6.023 0.591 -2.090 ETKDGv3 9
IVN N 7.375 0.680 -2.643 ETKDGv3 10
IVN CB 6.093 0.243 -0.591 ETKDGv3 11
IVN CG 4.730 0.272 0.053 ETKDGv3 12
IVN CD2 4.129 1.569 0.445 ETKDGv3 13
IVN CE2 2.902 1.613 0.978 ETKDGv3 14
IVN CD1 4.027 -0.859 0.233 ETKDGv3 15
IVN CE1 2.675 -0.813 0.827 ETKDGv3 16
IVN CZ 2.119 0.366 1.176 ETKDGv3 17
IVN C2 -0.704 1.672 3.220 ETKDGv3 18
IVN NAB -0.961 2.760 4.105 ETKDGv3 19
IVN OAX -2.620 -1.121 1.823 ETKDGv3 20
IVN CBJ -2.563 -2.243 0.942 ETKDGv3 21
IVN CBL -3.793 -3.131 1.164 ETKDGv3 22
IVN F1 -3.808 -3.577 2.474 ETKDGv3 23
IVN F3 -3.745 -4.229 0.324 ETKDGv3 24
IVN F2 -4.960 -2.429 0.923 ETKDGv3 25
IVN CBG -2.452 -1.809 -0.514 ETKDGv3 26
IVN CAP -1.614 -2.484 -1.328 ETKDGv3 27
IVN CAJ -1.522 -2.158 -2.763 ETKDGv3 28
IVN CBB -2.293 -1.199 -3.284 ETKDGv3 29
IVN CL1 -2.192 -0.815 -4.992 ETKDGv3 30
IVN CAR -3.228 -0.456 -2.418 ETKDGv3 31
IVN CBH -3.308 -0.726 -1.104 ETKDGv3 32
IVN NBK -4.201 0.043 -0.291 ETKDGv3 33
IVN NAW -3.780 1.105 0.514 ETKDGv3 34
IVN CAZ -4.814 1.833 0.776 ETKDGv3 35
IVN CAA -4.774 3.021 1.678 ETKDGv3 36
IVN CAK -6.007 1.291 0.126 ETKDGv3 37
IVN CAQ -5.591 0.223 -0.537 ETKDGv3 38
IVN H1 -0.035 -1.225 0.773 ETKDGv3 39
IVN H2 5.243 -2.450 -3.490 ETKDGv3 40
IVN H3 5.522 1.581 -2.208 ETKDGv3 41
IVN H4 7.301 0.959 -3.649 ETKDGv3 42
IVN H5 7.877 1.464 -2.165 ETKDGv3 43
IVN H7 6.741 0.983 -0.072 ETKDGv3 44
IVN H8 6.573 -0.752 -0.453 ETKDGv3 45
IVN H9 4.682 2.488 0.297 ETKDGv3 46
IVN H10 2.480 2.571 1.251 ETKDGv3 47
IVN H11 4.438 -1.817 -0.060 ETKDGv3 48
IVN H12 2.160 -1.749 0.991 ETKDGv3 49
IVN H13 -0.211 3.450 4.331 ETKDGv3 50
IVN H14 -1.907 2.878 4.530 ETKDGv3 51
IVN H15 -1.679 -2.857 1.229 ETKDGv3 52
IVN H16 -1.000 -3.290 -0.946 ETKDGv3 53
IVN H17 -0.834 -2.709 -3.391 ETKDGv3 54
IVN H18 -3.837 0.328 -2.852 ETKDGv3 55
IVN H19 -3.775 3.504 1.628 ETKDGv3 56
IVN H20 -4.971 2.698 2.721 ETKDGv3 57
IVN H21 -5.546 3.756 1.370 ETKDGv3 58
IVN H22 -7.013 1.689 0.141 ETKDGv3 59
IVN H23 -6.199 -0.407 -1.172 ETKDGv3 60
#