data_I3P
#
_chem_comp.id I3P
_chem_comp.name D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C6 H15 O15 P3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 420.096
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code I3P
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1BTN
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
I3P C1 C1 C 0 1 N N R N N N 2.972 57.170 28.819 0.516 0.078 1.915 C1 I3P 1
I3P C2 C2 C 0 1 N N R N N N 2.402 58.343 28.135 1.904 -0.086 1.294 C2 I3P 2
I3P C3 C3 C 0 1 N N S N N N 1.403 57.936 27.036 1.786 -0.864 -0.017 C3 I3P 3
I3P C4 C4 C 0 1 N N R N N N 0.339 57.030 27.607 0.883 -0.098 -0.985 C4 I3P 4
I3P C5 C5 C 0 1 N N R N N N 1.010 55.801 28.200 -0.505 0.066 -0.364 C5 I3P 5
I3P C6 C6 C 0 1 N N S N N N 1.966 56.227 29.313 -0.387 0.844 0.947 C6 I3P 6
I3P O1 O1 O 0 1 N N N N N N 3.925 57.540 29.889 0.626 0.805 3.140 O1 I3P 7
I3P O2 O2 O 0 1 N N N N N N 1.780 59.229 29.064 2.466 1.201 1.035 O2 I3P 8
I3P O3 O3 O 0 1 N N N N N N 0.780 59.090 26.511 3.083 -1.019 -0.598 O3 I3P 9
I3P O4 O4 O 0 1 N N N N N N -0.567 56.702 26.508 0.773 -0.825 -2.211 O4 I3P 10
I3P O5 O5 O 0 1 N N N N N N -0.014 54.949 28.781 -1.349 0.781 -1.268 O5 I3P 11
I3P O6 O6 O 0 1 N N N N N N 2.584 55.074 29.910 -1.684 0.999 1.527 O6 I3P 12
I3P P1 P1 P 0 1 N N N N N N 5.333 57.881 29.854 0.060 -0.153 4.303 P1 I3P 13
I3P O11 O11 O 0 1 N N N N N N 5.403 59.260 29.660 0.865 -1.394 4.354 O11 I3P 14
I3P O12 O12 O 0 1 N N N N N N 5.847 57.172 28.709 0.154 0.606 5.719 O12 I3P 15
I3P O13 O13 O 0 1 N N N N N N 6.019 57.235 30.879 -1.475 -0.523 3.993 O13 I3P 16
I3P P4 P4 P 0 1 N N N N N N -1.980 57.014 26.290 1.338 0.133 -3.373 P4 I3P 17
I3P O41 O41 O 0 1 N N N N N N -2.762 56.883 27.426 2.750 0.473 -3.089 O41 I3P 18
I3P O42 O42 O 0 1 N N N N N N -1.849 58.397 26.096 1.244 -0.626 -4.790 O42 I3P 19
I3P O43 O43 O 0 1 N N N N N N -2.368 56.622 25.032 0.462 1.483 -3.429 O43 I3P 20
I3P P5 P5 P 0 1 N N N N N N -0.360 53.656 28.480 -2.590 -0.185 -1.611 P5 I3P 21
I3P O51 O51 O 0 1 N N N N N N -1.690 53.649 28.310 -3.316 -0.517 -0.365 O51 I3P 22
I3P O52 O52 O 0 1 N N N N N N 0.190 53.157 27.285 -3.587 0.560 -2.631 O52 I3P 23
I3P O53 O53 O 0 1 N N N N N N 0.212 52.903 29.438 -2.042 -1.539 -2.290 O53 I3P 24
I3P H1 H1 H 0 1 N N N N N N 3.544 56.634 28.026 0.087 -0.903 2.112 H1 I3P 25
I3P H2 H2 H 0 1 N N N N N N 3.249 58.877 27.646 2.548 -0.632 1.983 H2 I3P 26
I3P H3 H3 H 0 1 N N N N N N 1.958 57.398 26.231 1.357 -1.847 0.179 H3 I3P 27
I3P H4 H4 H 0 1 N N N N N N -0.244 57.509 28.427 1.311 0.883 -1.183 H4 I3P 28
I3P H5 H5 H 0 1 N N N N N N 1.571 55.260 27.402 -0.934 -0.915 -0.167 H5 I3P 29
I3P H6 H6 H 0 1 N N N N N N 1.374 56.753 30.097 0.041 1.827 0.749 H6 I3P 30
I3P HO2 HO2 H 0 1 N N N N N N 1.412 59.985 28.622 3.339 1.052 0.645 HO2 I3P 31
I3P HO3 HO3 H 0 1 N N N N N N 0.163 58.838 25.833 3.620 -1.505 0.042 HO3 I3P 32
I3P HO6 HO6 H 0 1 N N N N N N 1.931 54.462 30.230 -1.565 1.493 2.350 HO6 I3P 33
I3P HO12 2HO1 H 0 0 N N N N N N 6.770 57.395 28.686 -0.193 -0.001 6.386 HO12 I3P 34
I3P HO13 3HO1 H 0 0 N N N N N N 6.942 57.458 30.856 -1.964 0.310 3.969 HO13 I3P 35
I3P HO42 2HO4 H 0 0 N N N N N N -2.766 58.599 25.954 1.592 -0.018 -5.457 HO42 I3P 36
I3P HO43 3HO4 H 0 0 N N N N N N -3.285 56.824 24.890 -0.448 1.217 -3.616 HO43 I3P 37
I3P HO52 2HO5 H 0 0 N N N N N N -0.049 52.261 27.076 -4.313 -0.051 -2.810 HO52 I3P 38
I3P HO53 3HO5 H 0 0 N N N N N N -0.027 52.007 29.229 -1.577 -1.279 -3.097 HO53 I3P 39
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
I3P C1 C2 SING N N 1
I3P C1 C6 SING N N 2
I3P C1 O1 SING N N 3
I3P C1 H1 SING N N 4
I3P C2 C3 SING N N 5
I3P C2 O2 SING N N 6
I3P C2 H2 SING N N 7
I3P C3 C4 SING N N 8
I3P C3 O3 SING N N 9
I3P C3 H3 SING N N 10
I3P C4 C5 SING N N 11
I3P C4 O4 SING N N 12
I3P C4 H4 SING N N 13
I3P C5 C6 SING N N 14
I3P C5 O5 SING N N 15
I3P C5 H5 SING N N 16
I3P C6 O6 SING N N 17
I3P C6 H6 SING N N 18
I3P O1 P1 SING N N 19
I3P O2 HO2 SING N N 20
I3P O3 HO3 SING N N 21
I3P O4 P4 SING N N 22
I3P O5 P5 SING N N 23
I3P O6 HO6 SING N N 24
I3P P1 O11 DOUB N N 25
I3P P1 O12 SING N N 26
I3P P1 O13 SING N N 27
I3P O12 HO12 SING N N 28
I3P O13 HO13 SING N N 29
I3P P4 O41 DOUB N N 30
I3P P4 O42 SING N N 31
I3P P4 O43 SING N N 32
I3P O42 HO42 SING N N 33
I3P O43 HO43 SING N N 34
I3P P5 O51 DOUB N N 35
I3P P5 O52 SING N N 36
I3P P5 O53 SING N N 37
I3P O52 HO52 SING N N 38
I3P O53 HO53 SING N N 39
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
I3P SMILES ACDLabs 10.04 O=P(OC1C(O)C(O)C(OP(=O)(O)O)C(O)C1OP(=O)(O)O)(O)O
I3P SMILES_CANONICAL CACTVS 3.341 O[C@@H]1[C@H](O)[C@@H](O[P](O)(O)=O)[C@H](O[P](O)(O)=O)[C@@H](O)[C@@H]1O[P](O)(O)=O
I3P SMILES CACTVS 3.341 O[CH]1[CH](O)[CH](O[P](O)(O)=O)[CH](O[P](O)(O)=O)[CH](O)[CH]1O[P](O)(O)=O
I3P SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "[C@H]1([C@@H]([C@H]([C@@H]([C@H]([C@@H]1OP(=O)(O)O)O)OP(=O)(O)O)OP(=O)(O)O)O)O"
I3P SMILES "OpenEye OEToolkits" 1.5.0 C1(C(C(C(C(C1OP(=O)(O)O)O)OP(=O)(O)O)OP(=O)(O)O)O)O
I3P InChI InChI 1.03 InChI=1S/C6H15O15P3/c7-1-2(8)5(20-23(13,14)15)6(21-24(16,17)18)3(9)4(1)19-22(10,11)12/h1-9H,(H2,10,11,12)(H2,13,14,15)(H2,16,17,18)/t1-,2+,3+,4-,5-,6-/m1/s1
I3P InChIKey InChI 1.03 MMWCIQZXVOZEGG-XJTPDSDZSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
I3P "SYSTEMATIC NAME" ACDLabs 10.04 "(1R,2R,3S,4R,5R,6S)-3,5,6-trihydroxycyclohexane-1,2,4-triyl tris[dihydrogen (phosphate)]"
I3P "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(1R,2R,3S,4R,5R,6S)-2,3,6-trihydroxy-4,5-diphosphonooxy-cyclohexyl] dihydrogen phosphate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
I3P 'Create component' 1999-07-08 PDBJ
I3P 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id I3P
_pdbe_chem_comp_drugbank_details.drugbank_id DB03401
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name '1D-myo-inositol 1,4,5-trisphosphate'
_pdbe_chem_comp_drugbank_details.description
'Intracellular messenger formed by the action of phospholipase C on phosphatidylinositol 4,5-bisphosphate, which is one of the phospholipids that make up the cell membrane. Inositol 1,4,5-trisphosphate is released into the cytoplasm where it releases calcium ions from internal stores within the cell's endoplasmic reticulum. These calcium ions stimulate the activity of B kinase or calmodulin.'
_pdbe_chem_comp_drugbank_details.cas_number 85166-31-0
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
I3P 1,4,5-Insp3 DrugBank ?
I3P '1D-myo-inositol 1,4,5-trisphosphate' DrugBank ?
I3P 'D-myo-Inositol 1,4,5-trisphosphate' DrugBank ?
I3P D-myo-Inositol-1,4,5-triphosphate DrugBank ?
I3P 'Inositol 1,4,5-trisphosphate' DrugBank ?
I3P Ins(1,4,5)P3 DrugBank ?
I3P InsP3 DrugBank ?
I3P IP3 DrugBank ?
#
_pdbe_chem_comp_drugbank_classification.comp_id I3P
_pdbe_chem_comp_drugbank_classification.drugbank_id DB03401
_pdbe_chem_comp_drugbank_classification.parent 'Inositol phosphates'
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Organooxygen compounds'
_pdbe_chem_comp_drugbank_classification.superclass 'Organic oxygen compounds'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as inositol phosphates. These are compounds containing a phosphate group attached to an inositol (or cyclohexanehexol) moiety.'
#
loop_
_pdbe_chem_comp_drugbank_targets.comp_id
_pdbe_chem_comp_drugbank_targets.drugbank_id
_pdbe_chem_comp_drugbank_targets.name
_pdbe_chem_comp_drugbank_targets.organism
_pdbe_chem_comp_drugbank_targets.uniprot_id
_pdbe_chem_comp_drugbank_targets.pharmacologically_active
_pdbe_chem_comp_drugbank_targets.ordinal
I3P DB03401 'Inositol 1,4,5-trisphosphate-gated calcium channel ITPR1' Humans Q14643 yes 1
I3P DB03401 'Inositol 1,4,5-trisphosphate-gated calcium channel ITPR3' Humans Q14573 unknown 2
I3P DB03401 'Inositol 1,4,5-trisphosphate-gated calcium channel ITPR2' Humans Q14571 unknown 3
I3P DB03401 Cytohesin-2 Humans Q99418 unknown 4
I3P DB03401 Epsin-1 Humans Q9Y6I3 unknown 5
I3P DB03401 '1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1' Humans P51178 unknown 6
I3P DB03401 Radixin Humans P35241 unknown 7
I3P DB03401 'Spectrin beta chain, non-erythrocytic 1' Humans Q01082 unknown 8
I3P DB03401 'Inositol-trisphosphate 3-kinase A' Humans P23677 unknown 9
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
I3P C1 C 10.301 -0.983 1
I3P C2 C 9.002 -1.732 2
I3P C3 C 7.702 -0.983 3
I3P C4 C 7.702 0.517 4
I3P C5 C 9.002 1.268 5
I3P C6 C 10.301 0.517 6
I3P O1 O 11.600 -1.732 7
I3P O2 O 9.002 -3.232 8
I3P O3 O 6.404 -1.732 9
I3P O4 O 6.404 1.268 10
I3P O5 O 9.002 2.768 11
I3P O6 O 11.600 1.268 12
I3P P1 P 11.600 -3.232 13
I3P O11 O 11.600 -4.732 14
I3P O12 O 13.100 -3.232 15
I3P O13 O 10.100 -3.232 16
I3P P4 P 5.104 0.517 17
I3P O41 O 3.805 -0.233 18
I3P O42 O 4.354 1.817 19
I3P O43 O 5.854 -0.781 20
I3P P5 P 10.301 3.518 21
I3P O51 O 11.600 4.268 22
I3P O52 O 9.551 4.816 23
I3P O53 O 11.051 2.219 24
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
I3P C1 C2 SINGLE NONE 1
I3P C1 C6 SINGLE NONE 2
I3P C1 O1 SINGLE BEGINDASH 3
I3P C2 C3 SINGLE NONE 4
I3P C2 O2 SINGLE BEGINDASH 5
I3P C3 C4 SINGLE NONE 6
I3P C3 O3 SINGLE BEGINDASH 7
I3P C4 C5 SINGLE NONE 8
I3P C4 O4 SINGLE BEGINWEDGE 9
I3P C5 C6 SINGLE NONE 10
I3P C5 O5 SINGLE BEGINDASH 11
I3P C6 O6 SINGLE BEGINWEDGE 12
I3P O1 P1 SINGLE NONE 13
I3P O4 P4 SINGLE NONE 14
I3P O5 P5 SINGLE NONE 15
I3P P1 O11 DOUBLE NONE 16
I3P P1 O12 SINGLE NONE 17
I3P P1 O13 SINGLE NONE 18
I3P P4 O41 DOUBLE NONE 19
I3P P4 O42 SINGLE NONE 20
I3P P4 O43 SINGLE NONE 21
I3P P5 O51 DOUBLE NONE 22
I3P P5 O52 SINGLE NONE 23
I3P P5 O53 SINGLE NONE 24
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
I3P MurckoScaffold S1 scaffold C1CCCCC1 InChI=1S/C6H12/c1-2-4-6-5-3-1/h1-6H2 XDTMQSROBMDMFD-UHFFFAOYSA-N
I3P cyclohexane F1 fragment C1CCCCC1 InChI=1S/C6H12/c1-2-4-6-5-3-1/h1-6H2 XDTMQSROBMDMFD-UHFFFAOYSA-N
I3P phosphate F2 fragment O=P(O)(O)O InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4) NBIIXXVUZAFLBC-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
I3P C1 S1 1
I3P C2 S1 1
I3P C3 S1 1
I3P C4 S1 1
I3P C5 S1 1
I3P C6 S1 1
I3P C1 F1 1
I3P C2 F1 1
I3P C3 F1 1
I3P C4 F1 1
I3P C5 F1 1
I3P C6 F1 1
I3P O1 F2 1
I3P P1 F2 1
I3P O11 F2 1
I3P O12 F2 1
I3P O13 F2 1
I3P O4 F2 2
I3P P4 F2 2
I3P O41 F2 2
I3P O42 F2 2
I3P O43 F2 2
I3P O5 F2 3
I3P P5 F2 3
I3P O51 F2 3
I3P O52 F2 3
I3P O53 F2 3
#
_pdbe_chem_comp_rdkit_properties.comp_id I3P
_pdbe_chem_comp_rdkit_properties.exactmw 419.962
_pdbe_chem_comp_rdkit_properties.amw 420.093
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 15
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 9
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 15
_pdbe_chem_comp_rdkit_properties.NumHBD 9
_pdbe_chem_comp_rdkit_properties.NumHBA 15
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 24
_pdbe_chem_comp_rdkit_properties.NumAtoms 39
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 18
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 1
_pdbe_chem_comp_rdkit_properties.NumRings 1
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 6
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 154.550
_pdbe_chem_comp_rdkit_properties.tpsa 260.970
_pdbe_chem_comp_rdkit_properties.CrippenClogP -3.484
_pdbe_chem_comp_rdkit_properties.CrippenMR 68.772
_pdbe_chem_comp_rdkit_properties.chi0v 13.149
_pdbe_chem_comp_rdkit_properties.chi1v 9.297
_pdbe_chem_comp_rdkit_properties.chi2v 3.065
_pdbe_chem_comp_rdkit_properties.chi3v 3.065
_pdbe_chem_comp_rdkit_properties.chi4v 2.371
_pdbe_chem_comp_rdkit_properties.chi0n 25.465
_pdbe_chem_comp_rdkit_properties.chi1n 11.590
_pdbe_chem_comp_rdkit_properties.chi2n 1.847
_pdbe_chem_comp_rdkit_properties.chi3n 1.847
_pdbe_chem_comp_rdkit_properties.chi4n 1.203
_pdbe_chem_comp_rdkit_properties.hallKierAlpha 0.210
_pdbe_chem_comp_rdkit_properties.kappa1 8.483
_pdbe_chem_comp_rdkit_properties.kappa2 7.447
_pdbe_chem_comp_rdkit_properties.kappa3 6.499
_pdbe_chem_comp_rdkit_properties.Phi 2.632
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
I3P UniChem DrugBank DB03401
I3P UniChem 'Guide to Pharmacology' 4222
I3P UniChem 'KEGG LIGAND' C01245
I3P UniChem ChEBI 16595
I3P UniChem ZINC ZINC000004095598
I3P UniChem SureChEMBL SCHEMBL9383914
I3P UniChem HMDB HMDB0001498
I3P UniChem 'PubChem TPHARMA' 14929378
I3P UniChem NMRShiftDB 60020722
I3P UniChem ACTor 85166-31-0
I3P UniChem BindingDb 50075183
I3P UniChem MetaboLights MTBLC16595
I3P UniChem BRENDA 240535
I3P UniChem BRENDA 77944
I3P UniChem 'Probes And Drugs' PD050148
I3P UniChem Nikkaji J260.291A
I3P UniChem PubChem 439456
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
I3P C1 1.664 -0.222 0.787 ETKDGv3 1
I3P C2 0.772 -1.403 1.241 ETKDGv3 2
I3P C3 -0.424 -1.645 0.294 ETKDGv3 3
I3P C4 -1.281 -0.366 0.138 ETKDGv3 4
I3P C5 -0.428 0.847 -0.314 ETKDGv3 5
I3P C6 0.829 1.068 0.567 ETKDGv3 6
I3P O1 2.316 -0.567 -0.425 ETKDGv3 7
I3P O2 1.532 -2.576 1.410 ETKDGv3 8
I3P O3 0.028 -2.086 -0.963 ETKDGv3 9
I3P O4 -1.908 -0.059 1.372 ETKDGv3 10
I3P O5 -0.002 0.648 -1.652 ETKDGv3 11
I3P O6 0.507 1.704 1.781 ETKDGv3 12
I3P P1 3.963 -0.114 -0.374 ETKDGv3 13
I3P O11 4.683 -0.913 0.691 ETKDGv3 14
I3P O12 4.117 1.543 -0.055 ETKDGv3 15
I3P O13 4.661 -0.448 -1.878 ETKDGv3 16
I3P P4 -3.555 -0.514 1.349 ETKDGv3 17
I3P O41 -4.148 -0.233 2.711 ETKDGv3 18
I3P O42 -4.394 0.404 0.197 ETKDGv3 19
I3P O43 -3.716 -2.170 1.023 ETKDGv3 20
I3P P5 -0.958 1.558 -2.739 ETKDGv3 21
I3P O51 -0.751 1.012 -4.133 ETKDGv3 22
I3P O52 -2.603 1.437 -2.350 ETKDGv3 23
I3P O53 -0.470 3.180 -2.715 ETKDGv3 24
I3P H1 2.372 -0.035 1.630 ETKDGv3 25
I3P H2 0.359 -1.161 2.242 ETKDGv3 26
I3P H3 -1.052 -2.444 0.752 ETKDGv3 27
I3P H4 -2.012 -0.549 -0.683 ETKDGv3 28
I3P H5 -1.052 1.764 -0.189 ETKDGv3 29
I3P H6 1.474 1.787 0.018 ETKDGv3 30
I3P HO2 1.903 -2.838 0.528 ETKDGv3 31
I3P HO3 -0.750 -2.501 -1.420 ETKDGv3 32
I3P HO6 0.048 1.054 2.369 ETKDGv3 33
I3P HO12 4.049 1.628 0.929 ETKDGv3 34
I3P HO13 5.585 -0.100 -1.811 ETKDGv3 35
I3P HO42 -4.417 -0.154 -0.620 ETKDGv3 36
I3P HO43 -3.552 -2.267 0.052 ETKDGv3 37
I3P HO52 -2.811 2.257 -1.836 ETKDGv3 38
I3P HO53 -0.580 3.472 -1.776 ETKDGv3 39
#