data_HEZ
#
_chem_comp.id HEZ
_chem_comp.name HEXANE-1,6-DIOL
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C6 H14 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 118.174
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code HEZ
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1QUD
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
HEZ O1 O1 O 0 1 N N N N N N 32.953 2.841 19.061 -0.285 0.000 4.297 O1 HEZ 1
HEZ C1 C1 C 0 1 N N N N N N 32.933 1.491 18.614 0.512 0.000 3.112 C1 HEZ 2
HEZ C2 C2 C 0 1 N N N N N N 31.705 1.267 17.706 -0.399 0.000 1.883 C2 HEZ 3
HEZ C3 C3 C 0 1 N N N N N N 31.994 0.144 16.693 0.455 0.000 0.614 C3 HEZ 4
HEZ C4 C4 C 0 1 N N N N N N 32.963 -0.433 15.644 -0.455 0.000 -0.614 C4 HEZ 5
HEZ C5 C5 C 0 1 N N N N N N 32.733 0.233 14.267 0.399 0.000 -1.883 C5 HEZ 6
HEZ C6 C6 C 0 1 N N N N N N 32.377 -0.838 13.225 -0.512 0.000 -3.112 C6 HEZ 7
HEZ O6 O6 O 0 1 N N N N N N 32.447 -1.766 12.157 0.285 0.000 -4.297 O6 HEZ 8
HEZ HO1 HO1 H 0 1 N N N N N N 33.708 2.978 19.619 0.325 0.000 5.046 HO1 HEZ 9
HEZ H11 1H1 H 0 1 N N N N N N 33.885 1.198 18.113 1.141 0.890 3.098 H11 HEZ 10
HEZ H12 2H1 H 0 1 N N N N N N 32.968 0.766 19.460 1.141 -0.890 3.098 H12 HEZ 11
HEZ H21 1H2 H 0 1 N N N N N N 30.780 1.068 18.296 -1.028 -0.890 1.897 H21 HEZ 12
HEZ H22 2H2 H 0 1 N N N N N N 31.379 2.208 17.204 -1.028 0.890 1.897 H22 HEZ 13
HEZ H31 1H3 H 0 1 N N N N N N 31.891 -0.742 17.361 1.084 0.890 0.600 H31 HEZ 14
HEZ H32 2H3 H 0 1 N N N N N N 31.065 0.202 16.078 1.084 -0.890 0.600 H32 HEZ 15
HEZ H41 1H4 H 0 1 N N N N N N 34.025 -0.349 15.971 -1.084 -0.890 -0.600 H41 HEZ 16
HEZ H42 2H4 H 0 1 N N N N N N 32.893 -1.544 15.583 -1.084 0.890 -0.600 H42 HEZ 17
HEZ H51 1H5 H 0 1 N N N N N N 31.967 1.042 14.315 1.028 0.890 -1.897 H51 HEZ 18
HEZ H52 2H5 H 0 1 N N N N N N 33.603 0.853 13.950 1.028 -0.890 -1.897 H52 HEZ 19
HEZ H61 1H6 H 0 1 N N N N N N 32.010 -1.580 13.972 -1.141 -0.890 -3.098 H61 HEZ 20
HEZ H62 2H6 H 0 1 N N N N N N 31.503 -0.281 12.810 -1.141 0.890 -3.098 H62 HEZ 21
HEZ HO6 HO6 H 0 1 N N N N N N 32.226 -2.428 11.512 -0.325 0.000 -5.046 HO6 HEZ 22
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
HEZ O1 C1 SING N N 1
HEZ O1 HO1 SING N N 2
HEZ C1 C2 SING N N 3
HEZ C1 H11 SING N N 4
HEZ C1 H12 SING N N 5
HEZ C2 C3 SING N N 6
HEZ C2 H21 SING N N 7
HEZ C2 H22 SING N N 8
HEZ C3 C4 SING N N 9
HEZ C3 H31 SING N N 10
HEZ C3 H32 SING N N 11
HEZ C4 C5 SING N N 12
HEZ C4 H41 SING N N 13
HEZ C4 H42 SING N N 14
HEZ C5 C6 SING N N 15
HEZ C5 H51 SING N N 16
HEZ C5 H52 SING N N 17
HEZ C6 O6 SING N N 18
HEZ C6 H61 SING N N 19
HEZ C6 H62 SING N N 20
HEZ O6 HO6 SING N N 21
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
HEZ SMILES ACDLabs 10.04 OCCCCCCO
HEZ SMILES_CANONICAL CACTVS 3.341 OCCCCCCO
HEZ SMILES CACTVS 3.341 OCCCCCCO
HEZ SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 C(CCCO)CCO
HEZ SMILES "OpenEye OEToolkits" 1.5.0 C(CCCO)CCO
HEZ InChI InChI 1.03 InChI=1S/C6H14O2/c7-5-3-1-2-4-6-8/h7-8H,1-6H2
HEZ InChIKey InChI 1.03 XXMIOPMDWAUFGU-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
HEZ "SYSTEMATIC NAME" ACDLabs 10.04 hexane-1,6-diol
HEZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 hexane-1,6-diol
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
HEZ 'Create component' 1999-07-08 RCSB
HEZ 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id HEZ
_pdbe_chem_comp_drugbank_details.drugbank_id DB02210
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name Hexane-1,6-Diol
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number 629-11-8
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_drugbank_classification.comp_id HEZ
_pdbe_chem_comp_drugbank_classification.drugbank_id DB02210
_pdbe_chem_comp_drugbank_classification.parent 'Fatty alcohols'
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Fatty Acyls'
_pdbe_chem_comp_drugbank_classification.superclass 'Lipids and lipid-like molecules'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as fatty alcohols. These are aliphatic alcohols consisting of a chain of a least six carbon atoms.'
#
loop_
_pdbe_chem_comp_drugbank_targets.comp_id
_pdbe_chem_comp_drugbank_targets.drugbank_id
_pdbe_chem_comp_drugbank_targets.name
_pdbe_chem_comp_drugbank_targets.organism
_pdbe_chem_comp_drugbank_targets.uniprot_id
_pdbe_chem_comp_drugbank_targets.pharmacologically_active
_pdbe_chem_comp_drugbank_targets.ordinal
HEZ DB02210 'Phospholipase A2' Humans P04054 yes 1
HEZ DB02210 'Glucocorticoid receptor' Humans P04150 unknown 2
HEZ DB02210 'GTPase HRas' Humans P01112 unknown 3
HEZ DB02210 Endolysin 'Enterobacteria phage T4' P00720 unknown 4
HEZ DB02210 'Holliday junction branch migration complex subunit RuvB' 'Thermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)' Q56313 unknown 5
HEZ DB02210 'Chain A, Red Copper Protein Nitrosocyanin' 'Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298)' Q820S6 unknown 6
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
HEZ O1 O 12.899 -0.375 1
HEZ C1 C 11.600 0.375 2
HEZ C2 C 10.301 -0.375 3
HEZ C3 C 9.002 0.375 4
HEZ C4 C 7.702 -0.375 5
HEZ C5 C 6.404 0.375 6
HEZ C6 C 5.104 -0.375 7
HEZ O6 O 3.805 0.375 8
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
HEZ O1 C1 SINGLE NONE 1
HEZ C1 C2 SINGLE NONE 2
HEZ C2 C3 SINGLE NONE 3
HEZ C3 C4 SINGLE NONE 4
HEZ C4 C5 SINGLE NONE 5
HEZ C5 C6 SINGLE NONE 6
HEZ C6 O6 SINGLE NONE 7
#
#
#
_pdbe_chem_comp_rdkit_properties.comp_id HEZ
_pdbe_chem_comp_rdkit_properties.exactmw 118.099
_pdbe_chem_comp_rdkit_properties.amw 118.176
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 2
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 7
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 2
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 8
_pdbe_chem_comp_rdkit_properties.NumAtoms 22
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 2
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 1
_pdbe_chem_comp_rdkit_properties.NumRings 0
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 69.995
_pdbe_chem_comp_rdkit_properties.tpsa 40.460
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.531
_pdbe_chem_comp_rdkit_properties.CrippenMR 32.640
_pdbe_chem_comp_rdkit_properties.chi0v 3.816
_pdbe_chem_comp_rdkit_properties.chi1v 1.658
_pdbe_chem_comp_rdkit_properties.chi2v 0.290
_pdbe_chem_comp_rdkit_properties.chi3v 0.290
_pdbe_chem_comp_rdkit_properties.chi4v 0.114
_pdbe_chem_comp_rdkit_properties.chi0n 17.816
_pdbe_chem_comp_rdkit_properties.chi1n 8.475
_pdbe_chem_comp_rdkit_properties.chi2n 0.290
_pdbe_chem_comp_rdkit_properties.chi3n 0.290
_pdbe_chem_comp_rdkit_properties.chi4n 0.114
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.080
_pdbe_chem_comp_rdkit_properties.kappa1 0.867
_pdbe_chem_comp_rdkit_properties.kappa2 6.920
_pdbe_chem_comp_rdkit_properties.kappa3 5.920
_pdbe_chem_comp_rdkit_properties.Phi 0.750
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
HEZ UniChem DrugBank DB02210
HEZ UniChem ChEBI 43078
HEZ UniChem ZINC ZINC000001555566
HEZ UniChem fdasrs ZIA319275I
HEZ UniChem 'PubChem TPHARMA' 15170579
HEZ UniChem NMRShiftDB 20097248
HEZ UniChem ACTor 140434-69-1
HEZ UniChem 'EPA CompTox Dashboard' DTXSID1027265
HEZ UniChem BRENDA 29252
HEZ UniChem BRENDA 49110
HEZ UniChem ChemicalBook CB4160863
HEZ UniChem rxnorm HEXANEDIOL
HEZ UniChem 'Probes And Drugs' PD008131
HEZ UniChem CCDC FECCOF
HEZ UniChem Nikkaji J6.886A
HEZ UniChem eMolecules 490866
HEZ UniChem SureChEMBL SCHEMBL15343
HEZ UniChem PubChem 12374
HEZ UniChem Mcule MCULE-8817570517
HEZ UniChem ACTor 629-11-8
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
HEZ O1 2.646 1.672 -0.353 ETKDGv3 1
HEZ C1 2.785 0.434 0.292 ETKDGv3 2
HEZ C2 1.413 -0.159 0.627 ETKDGv3 3
HEZ C3 0.626 -0.535 -0.639 ETKDGv3 4
HEZ C4 -0.647 -1.345 -0.333 ETKDGv3 5
HEZ C5 -1.692 -0.609 0.526 ETKDGv3 6
HEZ C6 -2.240 0.652 -0.146 ETKDGv3 7
HEZ O6 -3.311 1.150 0.605 ETKDGv3 8
HEZ HO1 2.597 1.485 -1.327 ETKDGv3 9
HEZ H11 3.380 -0.278 -0.325 ETKDGv3 10
HEZ H12 3.342 0.595 1.239 ETKDGv3 11
HEZ H21 0.842 0.583 1.225 ETKDGv3 12
HEZ H22 1.566 -1.067 1.251 ETKDGv3 13
HEZ H31 0.368 0.378 -1.215 ETKDGv3 14
HEZ H32 1.273 -1.161 -1.292 ETKDGv3 15
HEZ H41 -0.360 -2.284 0.188 ETKDGv3 16
HEZ H42 -1.118 -1.641 -1.296 ETKDGv3 17
HEZ H51 -2.538 -1.308 0.704 ETKDGv3 18
HEZ H52 -1.268 -0.354 1.520 ETKDGv3 19
HEZ H61 -2.588 0.408 -1.175 ETKDGv3 20
HEZ H62 -1.443 1.426 -0.202 ETKDGv3 21
HEZ HO6 -3.631 1.959 0.126 ETKDGv3 22
#