data_H9Z
#
_chem_comp.id H9Z
_chem_comp.name
3-[[8-(1-methylindol-6-yl)quinoxalin-6-yl]amino]-~{N}-[(3~{S})-1-methylpiperidin-3-yl]pyridine-4-carboxamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C29 H29 N7 O"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2018-12-03
_chem_comp.pdbx_modified_date 2019-01-18
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 491.587
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code H9Z
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6IBX
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
H9Z CBJ C1 C 0 1 N N N N N N 84.429 46.621 266.937 -5.132 -1.920 2.601 CBJ H9Z 1
H9Z CBI C2 C 0 1 N N N N N N 83.495 45.705 266.157 -6.254 -1.985 1.561 CBI H9Z 2
H9Z CBH C3 C 0 1 N N N N N N 83.276 44.437 266.919 -5.870 -2.984 0.467 CBH H9Z 3
H9Z NBG N1 N 0 1 N N N N N N 84.544 43.762 267.212 -4.615 -2.560 -0.167 NBG H9Z 4
H9Z CBK C4 C 0 1 N N N N N N 84.339 42.618 268.106 -4.287 -3.417 -1.313 CBK H9Z 5
H9Z CBF C5 C 0 1 N N N N N N 85.515 44.604 267.892 -3.513 -2.535 0.804 CBF H9Z 6
H9Z CBE C6 C 0 1 N N S N N N 85.732 45.940 267.264 -3.826 -1.523 1.908 CBE H9Z 7
H9Z NBD N2 N 0 1 N N N N N N 86.584 45.830 266.062 -3.970 -0.188 1.322 NBD H9Z 8
H9Z CBB C7 C 0 1 N N N N N N 87.554 46.751 265.903 -2.880 0.578 1.114 CBB H9Z 9
H9Z OBC O1 O 0 1 N N N N N N 87.795 47.540 266.810 -1.778 0.161 1.413 OBC H9Z 10
H9Z CAW C8 C 0 1 Y N N N N N 88.413 46.648 264.789 -3.025 1.924 0.523 CAW H9Z 11
H9Z CAX C9 C 0 1 Y N N N N N 87.982 46.026 263.621 -4.278 2.408 0.133 CAX H9Z 12
H9Z CAY C10 C 0 1 Y N N N N N 88.810 45.862 262.520 -4.370 3.674 -0.410 CAY H9Z 13
H9Z NAZ N3 N 0 1 Y N N N N N 90.122 46.320 262.572 -3.298 4.428 -0.565 NAZ H9Z 14
H9Z CBA C11 C 0 1 Y N N N N N 90.569 46.952 263.730 -2.097 4.020 -0.215 CBA H9Z 15
H9Z CAV C12 C 0 1 Y N N N N N 89.735 47.124 264.832 -1.908 2.758 0.341 CAV H9Z 16
H9Z NAQ N4 N 0 1 N N N N N N 90.124 47.763 265.956 -0.639 2.333 0.714 NAQ H9Z 17
H9Z CAA C13 C 0 1 Y N N N N N 91.425 47.969 266.257 0.092 1.493 -0.127 CAA H9Z 18
H9Z CAB C14 C 0 1 Y N N N N N 91.757 49.181 266.857 1.316 0.977 0.306 CAB H9Z 19
H9Z CAF C15 C 0 1 Y N N N N N 92.429 46.993 266.098 -0.406 1.178 -1.374 CAF H9Z 20
H9Z CAE C16 C 0 1 Y N N N N N 93.725 47.272 266.511 0.322 0.334 -2.227 CAE H9Z 21
H9Z NAM N5 N 0 1 Y N N N N N 94.709 46.349 266.339 -0.144 0.016 -3.441 NAM H9Z 22
H9Z CAN C17 C 0 1 Y N N N N N 96.028 46.627 266.728 0.558 -0.776 -4.221 CAN H9Z 23
H9Z CAO C18 C 0 1 Y N N N N N 96.324 47.847 267.330 1.783 -1.289 -3.797 CAO H9Z 24
H9Z NAP N6 N 0 1 Y N N N N N 95.317 48.777 267.484 2.260 -0.991 -2.608 NAP H9Z 25
H9Z CAD C19 C 0 1 Y N N N N N 94.052 48.514 267.069 1.567 -0.189 -1.798 CAD H9Z 26
H9Z CAC C20 C 0 1 Y N N N N N 93.055 49.464 267.261 2.057 0.144 -0.510 CAC H9Z 27
H9Z CAG C21 C 0 1 Y N N N N N 93.320 50.704 267.883 3.353 -0.397 -0.043 CAG H9Z 28
H9Z CAH C22 C 0 1 Y N N N N N 92.585 51.093 268.995 4.308 0.461 0.493 CAH H9Z 29
H9Z CAI C23 C 0 1 Y N N N N N 92.799 52.269 269.584 5.522 -0.049 0.931 CAI H9Z 30
H9Z NAT N7 N 0 1 Y N N N N N 92.212 52.851 270.623 6.642 0.524 1.493 NAT H9Z 31
H9Z CAU C24 C 0 1 N N N N N N 91.159 52.288 271.462 6.804 1.951 1.780 CAU H9Z 32
H9Z CAS C25 C 0 1 Y N N N N N 92.797 54.039 270.848 7.580 -0.440 1.745 CAS H9Z 33
H9Z CAR C26 C 0 1 Y N N N N N 93.744 54.223 269.926 7.116 -1.642 1.365 CAR H9Z 34
H9Z CAJ C27 C 0 1 Y N N N N N 93.749 53.111 269.144 5.771 -1.431 0.826 CAJ H9Z 35
H9Z CAK C28 C 0 1 Y N N N N N 94.491 52.778 268.082 4.801 -2.280 0.284 CAK H9Z 36
H9Z CAL C29 C 0 1 Y N N N N N 94.309 51.561 267.440 3.609 -1.770 -0.138 CAL H9Z 37
H9Z H1 H1 H 0 1 N N N N N N 84.637 47.517 266.333 -5.382 -1.178 3.360 H1 H9Z 38
H9Z H2 H2 H 0 1 N N N N N N 83.936 46.917 267.875 -5.013 -2.896 3.072 H2 H9Z 39
H9Z H3 H3 H 0 1 N N N N N N 83.944 45.471 265.181 -7.177 -2.309 2.041 H3 H9Z 40
H9Z H4 H4 H 0 1 N N N N N N 82.530 46.211 266.005 -6.399 -0.999 1.120 H4 H9Z 41
H9Z H5 H5 H 0 1 N N N N N N 82.769 44.672 267.866 -5.738 -3.973 0.907 H5 H9Z 42
H9Z H6 H6 H 0 1 N N N N N N 82.643 43.765 266.321 -6.660 -3.023 -0.283 H6 H9Z 43
H9Z H8 H8 H 0 1 N N N N N N 85.305 42.132 268.308 -5.119 -3.414 -2.018 H8 H9Z 44
H9Z H9 H9 H 0 1 N N N N N N 83.899 42.966 269.052 -3.392 -3.039 -1.806 H9 H9Z 45
H9Z H10 H10 H 0 1 N N N N N N 83.659 41.897 267.629 -4.109 -4.435 -0.966 H10 H9Z 46
H9Z H11 H11 H 0 1 N N N N N N 85.167 44.763 268.923 -3.392 -3.525 1.242 H11 H9Z 47
H9Z H12 H12 H 0 1 N N N N N N 86.478 44.072 267.907 -2.591 -2.247 0.298 H12 H9Z 48
H9Z H13 H13 H 0 1 N N N N N N 86.260 46.570 267.995 -3.015 -1.516 2.636 H13 H9Z 49
H9Z H14 H14 H 0 1 N N N N N N 86.446 45.100 265.392 -4.849 0.145 1.083 H14 H9Z 50
H9Z H15 H15 H 0 1 N N N N N N 86.968 45.658 263.570 -5.162 1.800 0.255 H15 H9Z 51
H9Z H16 H16 H 0 1 N N N N N N 88.438 45.381 261.627 -5.334 4.053 -0.712 H16 H9Z 52
H9Z H17 H17 H 0 1 N N N N N N 91.585 47.317 263.774 -1.249 4.672 -0.362 H17 H9Z 53
H9Z H18 H18 H 0 1 N N N N N N 89.424 48.096 266.588 -0.261 2.620 1.560 H18 H9Z 54
H9Z H19 H19 H 0 1 N N N N N N 90.985 49.920 267.012 1.688 1.232 1.288 H19 H9Z 55
H9Z H20 H20 H 0 1 N N N N N N 92.192 46.035 265.658 -1.356 1.581 -1.694 H20 H9Z 56
H9Z H21 H21 H 0 1 N N N N N N 96.809 45.899 266.562 0.182 -1.032 -5.201 H21 H9Z 57
H9Z H22 H22 H 0 1 N N N N N N 97.326 48.062 267.671 2.346 -1.939 -4.451 H22 H9Z 58
H9Z H23 H23 H 0 1 N N N N N N 91.827 50.432 269.389 4.105 1.519 0.568 H23 H9Z 59
H9Z H24 H24 H 0 1 N N N N N N 90.882 53.014 272.240 6.446 2.162 2.788 H24 H9Z 60
H9Z H25 H25 H 0 1 N N N N N N 90.279 52.061 270.843 7.857 2.220 1.704 H25 H9Z 61
H9Z H26 H26 H 0 1 N N N N N N 91.522 51.364 271.936 6.227 2.534 1.061 H26 H9Z 62
H9Z H27 H27 H 0 1 N N N N N N 92.544 54.728 271.640 8.550 -0.261 2.184 H27 H9Z 63
H9Z H28 H28 H 0 1 N N N N N N 94.383 55.088 269.821 7.637 -2.585 1.442 H28 H9Z 64
H9Z H29 H29 H 0 1 N N N N N N 95.241 53.465 267.719 4.994 -3.340 0.204 H29 H9Z 65
H9Z H30 H30 H 0 1 N N N N N N 94.934 51.287 266.603 2.860 -2.428 -0.551 H30 H9Z 66
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
H9Z CAY NAZ DOUB Y N 1
H9Z CAY CAX SING Y N 2
H9Z NAZ CBA SING Y N 3
H9Z CAX CAW DOUB Y N 4
H9Z CBA CAV DOUB Y N 5
H9Z CAW CAV SING Y N 6
H9Z CAW CBB SING N N 7
H9Z CAV NAQ SING N N 8
H9Z CBB NBD SING N N 9
H9Z CBB OBC DOUB N N 10
H9Z NAQ CAA SING N N 11
H9Z NBD CBE SING N N 12
H9Z CAF CAA DOUB Y N 13
H9Z CAF CAE SING Y N 14
H9Z CBI CBH SING N N 15
H9Z CBI CBJ SING N N 16
H9Z CAA CAB SING Y N 17
H9Z NAM CAE DOUB Y N 18
H9Z NAM CAN SING Y N 19
H9Z CAE CAD SING Y N 20
H9Z CAN CAO DOUB Y N 21
H9Z CAB CAC DOUB Y N 22
H9Z CBH NBG SING N N 23
H9Z CBJ CBE SING N N 24
H9Z CAD CAC SING Y N 25
H9Z CAD NAP DOUB Y N 26
H9Z NBG CBF SING N N 27
H9Z NBG CBK SING N N 28
H9Z CAC CAG SING N N 29
H9Z CBE CBF SING N N 30
H9Z CAO NAP SING Y N 31
H9Z CAL CAG DOUB Y N 32
H9Z CAL CAK SING Y N 33
H9Z CAG CAH SING Y N 34
H9Z CAK CAJ DOUB Y N 35
H9Z CAH CAI DOUB Y N 36
H9Z CAJ CAI SING Y N 37
H9Z CAJ CAR SING Y N 38
H9Z CAI NAT SING Y N 39
H9Z CAR CAS DOUB Y N 40
H9Z NAT CAS SING Y N 41
H9Z NAT CAU SING N N 42
H9Z CBJ H1 SING N N 43
H9Z CBJ H2 SING N N 44
H9Z CBI H3 SING N N 45
H9Z CBI H4 SING N N 46
H9Z CBH H5 SING N N 47
H9Z CBH H6 SING N N 48
H9Z CBK H8 SING N N 49
H9Z CBK H9 SING N N 50
H9Z CBK H10 SING N N 51
H9Z CBF H11 SING N N 52
H9Z CBF H12 SING N N 53
H9Z CBE H13 SING N N 54
H9Z NBD H14 SING N N 55
H9Z CAX H15 SING N N 56
H9Z CAY H16 SING N N 57
H9Z CBA H17 SING N N 58
H9Z NAQ H18 SING N N 59
H9Z CAB H19 SING N N 60
H9Z CAF H20 SING N N 61
H9Z CAN H21 SING N N 62
H9Z CAO H22 SING N N 63
H9Z CAH H23 SING N N 64
H9Z CAU H24 SING N N 65
H9Z CAU H25 SING N N 66
H9Z CAU H26 SING N N 67
H9Z CAS H27 SING N N 68
H9Z CAR H28 SING N N 69
H9Z CAK H29 SING N N 70
H9Z CAL H30 SING N N 71
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
H9Z InChI InChI 1.03 InChI=1S/C29H29N7O/c1-35-12-3-4-21(18-35)34-29(37)23-7-9-30-17-26(23)33-22-15-24(28-25(16-22)31-10-11-32-28)20-6-5-19-8-13-36(2)27(19)14-20/h5-11,13-17,21,33H,3-4,12,18H2,1-2H3,(H,34,37)/t21-/m0/s1
H9Z InChIKey InChI 1.03 CZIVVJNETCQZQP-NRFANRHFSA-N
H9Z SMILES_CANONICAL CACTVS 3.385 CN1CCC[C@@H](C1)NC(=O)c2ccncc2Nc3cc4nccnc4c(c3)c5ccc6ccn(C)c6c5
H9Z SMILES CACTVS 3.385 CN1CCC[CH](C1)NC(=O)c2ccncc2Nc3cc4nccnc4c(c3)c5ccc6ccn(C)c6c5
H9Z SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 Cn1ccc2c1cc(cc2)c3cc(cc4c3nccn4)Nc5cnccc5C(=O)N[C@H]6CCCN(C6)C
H9Z SMILES "OpenEye OEToolkits" 2.0.6 Cn1ccc2c1cc(cc2)c3cc(cc4c3nccn4)Nc5cnccc5C(=O)NC6CCCN(C6)C
#
_pdbx_chem_comp_identifier.comp_id H9Z
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.6
_pdbx_chem_comp_identifier.identifier
3-[[8-(1-methylindol-6-yl)quinoxalin-6-yl]amino]-~{N}-[(3~{S})-1-methylpiperidin-3-yl]pyridine-4-carboxamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
H9Z 'Create component' 2018-12-03 EBI
H9Z 'Initial release' 2019-01-23 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
H9Z CBJ C 3.000 5.681 1
H9Z CBI C 3.000 7.181 2
H9Z CBH C 4.299 7.931 3
H9Z NBG N 5.598 7.181 4
H9Z CBK C 6.897 7.931 5
H9Z CBF C 5.598 5.681 6
H9Z CBE C 4.299 4.931 7
H9Z NBD N 4.299 3.431 8
H9Z CBB C 5.598 2.681 9
H9Z OBC O 5.598 1.181 10
H9Z CAW C 6.897 3.431 11
H9Z CAX C 6.897 4.931 12
H9Z CAY C 8.196 5.681 13
H9Z NAZ N 9.495 4.931 14
H9Z CBA C 9.495 3.431 15
H9Z CAV C 8.196 2.681 16
H9Z NAQ N 8.196 1.181 17
H9Z CAA C 9.495 0.431 18
H9Z CAB C 9.495 -1.069 19
H9Z CAF C 10.794 1.181 20
H9Z CAE C 12.093 0.431 21
H9Z NAM N 13.434 1.233 22
H9Z CAN C 14.793 0.463 23
H9Z CAO C 14.793 -1.100 24
H9Z NAP N 13.434 -1.871 25
H9Z CAD C 12.093 -1.069 26
H9Z CAC C 10.794 -1.819 27
H9Z CAG C 10.794 -3.319 28
H9Z CAH C 9.495 -4.069 29
H9Z CAI C 9.495 -5.569 30
H9Z NAT N 8.390 -6.569 31
H9Z CAU C 6.922 -6.260 32
H9Z CAS C 8.997 -7.931 33
H9Z CAR C 10.480 -7.777 34
H9Z CAJ C 10.794 -6.319 35
H9Z CAK C 12.093 -5.569 36
H9Z CAL C 12.093 -4.069 37
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
H9Z CAY NAZ SINGLE NONE 1
H9Z CAY CAX DOUBLE NONE 2
H9Z NAZ CBA DOUBLE NONE 3
H9Z CAX CAW SINGLE NONE 4
H9Z CBA CAV SINGLE NONE 5
H9Z CAW CAV DOUBLE NONE 6
H9Z CAW CBB SINGLE NONE 7
H9Z CAV NAQ SINGLE NONE 8
H9Z CBB NBD SINGLE NONE 9
H9Z CBB OBC DOUBLE NONE 10
H9Z NAQ CAA SINGLE NONE 11
H9Z CBE NBD SINGLE BEGINWEDGE 12
H9Z CAF CAA SINGLE NONE 13
H9Z CAF CAE DOUBLE NONE 14
H9Z CBI CBH SINGLE NONE 15
H9Z CBI CBJ SINGLE NONE 16
H9Z CAA CAB DOUBLE NONE 17
H9Z NAM CAE SINGLE NONE 18
H9Z NAM CAN DOUBLE NONE 19
H9Z CAE CAD SINGLE NONE 20
H9Z CAN CAO SINGLE NONE 21
H9Z CAB CAC SINGLE NONE 22
H9Z CBH NBG SINGLE NONE 23
H9Z CBJ CBE SINGLE NONE 24
H9Z CAD CAC DOUBLE NONE 25
H9Z CAD NAP SINGLE NONE 26
H9Z NBG CBF SINGLE NONE 27
H9Z NBG CBK SINGLE NONE 28
H9Z CAC CAG SINGLE NONE 29
H9Z CBE CBF SINGLE NONE 30
H9Z CAO NAP DOUBLE NONE 31
H9Z CAL CAG SINGLE NONE 32
H9Z CAL CAK DOUBLE NONE 33
H9Z CAG CAH DOUBLE NONE 34
H9Z CAK CAJ SINGLE NONE 35
H9Z CAH CAI SINGLE NONE 36
H9Z CAJ CAI DOUBLE NONE 37
H9Z CAJ CAR SINGLE NONE 38
H9Z CAI NAT SINGLE NONE 39
H9Z CAR CAS DOUBLE NONE 40
H9Z NAT CAS SINGLE NONE 41
H9Z NAT CAU SINGLE NONE 42
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
H9Z MurckoScaffold S1 scaffold 'O=C(N[C@H]1CCCNC1)c1ccncc1Nc1cc(-c2ccc3cc[nH]c3c2)c2nccnc2c1' InChI=1S/C27H25N7O/c35-27(34-19-2-1-7-28-15-19)21-6-8-29-16-25(21)33-20-13-22(26-24(14-20)31-10-11-32-26)18-4-3-17-5-9-30-23(17)12-18/h3-6,8-14,16,19,28,30,33H,1-2,7,15H2,(H,34,35)/t19-/m0/s1 LHLRGGUGUQRLOD-IBGZPJMESA-N
H9Z amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
H9Z indole F2 fragment 'c1ccc2[nH]ccc2c1' InChI=1S/C8H7N/c1-2-4-8-7(3-1)5-6-9-8/h1-6,9H SIKJAQJRHWYJAI-UHFFFAOYSA-N
H9Z phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
H9Z pyrazine F4 fragment c1cnccn1 InChI=1S/C4H4N2/c1-2-6-4-3-5-1/h1-4H KYQCOXFCLRTKLS-UHFFFAOYSA-N
H9Z pyridine F5 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
H9Z pyrrole F6 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N
H9Z quinoxaline F7 fragment c1ccc2nccnc2c1 InChI=1S/C8H6N2/c1-2-4-8-7(3-1)9-5-6-10-8/h1-6H XSCHRSMBECNVNS-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
H9Z CBJ S1 1
H9Z CBI S1 1
H9Z CBH S1 1
H9Z NBG S1 1
H9Z CBF S1 1
H9Z CBE S1 1
H9Z NBD S1 1
H9Z CBB S1 1
H9Z OBC S1 1
H9Z CAW S1 1
H9Z CAX S1 1
H9Z CAY S1 1
H9Z NAZ S1 1
H9Z CBA S1 1
H9Z CAV S1 1
H9Z NAQ S1 1
H9Z CAA S1 1
H9Z CAB S1 1
H9Z CAF S1 1
H9Z CAE S1 1
H9Z NAM S1 1
H9Z CAN S1 1
H9Z CAO S1 1
H9Z NAP S1 1
H9Z CAD S1 1
H9Z CAC S1 1
H9Z CAG S1 1
H9Z CAH S1 1
H9Z CAI S1 1
H9Z NAT S1 1
H9Z CAS S1 1
H9Z CAR S1 1
H9Z CAJ S1 1
H9Z CAK S1 1
H9Z CAL S1 1
H9Z NBD F1 1
H9Z CBB F1 1
H9Z OBC F1 1
H9Z CAW F1 1
H9Z CAI F2 1
H9Z CAJ F2 1
H9Z CAR F2 1
H9Z CAS F2 1
H9Z NAT F2 1
H9Z CAK F2 1
H9Z CAL F2 1
H9Z CAG F2 1
H9Z CAH F2 1
H9Z CAA F3 1
H9Z CAF F3 1
H9Z CAE F3 1
H9Z CAD F3 1
H9Z CAC F3 1
H9Z CAB F3 1
H9Z CAG F3 2
H9Z CAL F3 2
H9Z CAK F3 2
H9Z CAJ F3 2
H9Z CAI F3 2
H9Z CAH F3 2
H9Z CAE F4 1
H9Z CAD F4 1
H9Z NAP F4 1
H9Z CAO F4 1
H9Z CAN F4 1
H9Z NAM F4 1
H9Z CAY F5 1
H9Z CAX F5 1
H9Z CAW F5 1
H9Z CAV F5 1
H9Z CBA F5 1
H9Z NAZ F5 1
H9Z CAI F6 1
H9Z CAJ F6 1
H9Z CAR F6 1
H9Z CAS F6 1
H9Z NAT F6 1
H9Z CAA F7 1
H9Z CAB F7 1
H9Z CAC F7 1
H9Z CAD F7 1
H9Z CAE F7 1
H9Z CAF F7 1
H9Z NAM F7 1
H9Z CAN F7 1
H9Z CAO F7 1
H9Z NAP F7 1
#
_pdbe_chem_comp_rdkit_properties.comp_id H9Z
_pdbe_chem_comp_rdkit_properties.exactmw 491.243
_pdbe_chem_comp_rdkit_properties.amw 491.599
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 7
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 37
_pdbe_chem_comp_rdkit_properties.NumAtoms 66
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 8
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.241
_pdbe_chem_comp_rdkit_properties.NumRings 6
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 5
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 255.782
_pdbe_chem_comp_rdkit_properties.tpsa 87.970
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.698
_pdbe_chem_comp_rdkit_properties.CrippenMR 139.308
_pdbe_chem_comp_rdkit_properties.chi0v 18.039
_pdbe_chem_comp_rdkit_properties.chi1v 10.032
_pdbe_chem_comp_rdkit_properties.chi2v 4.738
_pdbe_chem_comp_rdkit_properties.chi3v 4.738
_pdbe_chem_comp_rdkit_properties.chi4v 3.177
_pdbe_chem_comp_rdkit_properties.chi0n 47.039
_pdbe_chem_comp_rdkit_properties.chi1n 24.426
_pdbe_chem_comp_rdkit_properties.chi2n 4.738
_pdbe_chem_comp_rdkit_properties.chi3n 4.738
_pdbe_chem_comp_rdkit_properties.chi4n 3.177
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.300
_pdbe_chem_comp_rdkit_properties.kappa1 7.386
_pdbe_chem_comp_rdkit_properties.kappa2 9.630
_pdbe_chem_comp_rdkit_properties.kappa3 4.632
_pdbe_chem_comp_rdkit_properties.Phi 1.922
#
_pdbe_chem_comp_external_mappings.comp_id H9Z
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PubChem
_pdbe_chem_comp_external_mappings.resource_id 137319649
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
H9Z CBJ 5.890 -0.982 1.779 ETKDGv3 1
H9Z CBI 6.686 -0.094 2.751 ETKDGv3 2
H9Z CBH 6.642 1.400 2.374 ETKDGv3 3
H9Z NBG 6.649 1.619 0.913 ETKDGv3 4
H9Z CBK 7.957 1.299 0.315 ETKDGv3 5
H9Z CBF 5.523 0.959 0.201 ETKDGv3 6
H9Z CBE 4.839 -0.174 1.005 ETKDGv3 7
H9Z NBD 4.080 -1.048 0.104 ETKDGv3 8
H9Z CBB 2.859 -0.625 -0.522 ETKDGv3 9
H9Z OBC 2.343 0.482 -0.205 ETKDGv3 10
H9Z CAW 2.212 -1.472 -1.552 ETKDGv3 11
H9Z CAX 3.071 -2.229 -2.496 ETKDGv3 12
H9Z CAY 2.514 -2.973 -3.456 ETKDGv3 13
H9Z NAZ 1.086 -3.047 -3.574 ETKDGv3 14
H9Z CBA 0.301 -2.392 -2.770 ETKDGv3 15
H9Z CAV 0.866 -1.540 -1.693 ETKDGv3 16
H9Z NAQ -0.019 -0.894 -0.762 ETKDGv3 17
H9Z CAA -1.231 -0.228 -1.156 ETKDGv3 18
H9Z CAB -2.222 -0.063 -0.261 ETKDGv3 19
H9Z CAF -1.386 0.333 -2.523 ETKDGv3 20
H9Z CAE -2.515 0.963 -2.862 ETKDGv3 21
H9Z NAM -2.697 1.499 -4.178 ETKDGv3 22
H9Z CAN -3.806 2.091 -4.514 ETKDGv3 23
H9Z CAO -4.920 2.228 -3.545 ETKDGv3 24
H9Z NAP -4.810 1.771 -2.331 ETKDGv3 25
H9Z CAD -3.612 1.122 -1.884 ETKDGv3 26
H9Z CAC -3.480 0.640 -0.630 ETKDGv3 27
H9Z CAG -4.552 0.791 0.382 ETKDGv3 28
H9Z CAH -4.960 -0.276 1.104 ETKDGv3 29
H9Z CAI -6.024 -0.084 2.107 ETKDGv3 30
H9Z NAT -6.575 -1.052 2.991 ETKDGv3 31
H9Z CAU -5.965 -2.320 3.369 ETKDGv3 32
H9Z CAS -7.476 -0.295 3.804 ETKDGv3 33
H9Z CAR -7.509 0.979 3.418 ETKDGv3 34
H9Z CAJ -6.562 1.100 2.316 ETKDGv3 35
H9Z CAK -6.128 2.286 1.565 ETKDGv3 36
H9Z CAL -5.166 2.136 0.639 ETKDGv3 37
H9Z H1 5.390 -1.795 2.350 ETKDGv3 38
H9Z H2 6.587 -1.463 1.059 ETKDGv3 39
H9Z H3 6.277 -0.210 3.778 ETKDGv3 40
H9Z H4 7.742 -0.439 2.777 ETKDGv3 41
H9Z H5 7.495 1.932 2.851 ETKDGv3 42
H9Z H6 5.720 1.857 2.798 ETKDGv3 43
H9Z H8 7.983 1.646 -0.740 ETKDGv3 44
H9Z H9 8.771 1.829 0.854 ETKDGv3 45
H9Z H10 8.157 0.207 0.338 ETKDGv3 46
H9Z H11 4.761 1.735 -0.027 ETKDGv3 47
H9Z H12 5.852 0.557 -0.785 ETKDGv3 48
H9Z H13 4.137 0.269 1.746 ETKDGv3 49
H9Z H14 4.406 -2.030 -0.051 ETKDGv3 50
H9Z H15 4.151 -2.169 -2.430 ETKDGv3 51
H9Z H16 3.138 -3.521 -4.150 ETKDGv3 52
H9Z H17 -0.770 -2.488 -2.883 ETKDGv3 53
H9Z H18 0.211 -0.952 0.257 ETKDGv3 54
H9Z H19 -2.105 -0.446 0.746 ETKDGv3 55
H9Z H20 -0.585 0.244 -3.246 ETKDGv3 56
H9Z H21 -3.919 2.485 -5.515 ETKDGv3 57
H9Z H22 -5.836 2.716 -3.851 ETKDGv3 58
H9Z H23 -4.533 -1.259 0.946 ETKDGv3 59
H9Z H24 -5.642 -2.870 2.462 ETKDGv3 60
H9Z H25 -5.086 -2.131 4.020 ETKDGv3 61
H9Z H26 -6.701 -2.944 3.918 ETKDGv3 62
H9Z H27 -8.032 -0.702 4.638 ETKDGv3 63
H9Z H28 -8.092 1.769 3.872 ETKDGv3 64
H9Z H29 -6.564 3.257 1.762 ETKDGv3 65
H9Z H30 -4.819 3.004 0.091 ETKDGv3 66
#