data_H0W
#
_chem_comp.id H0W
_chem_comp.name
6-chloranyl-3-[3-[(1~{S})-1-(4-chlorophenyl)ethyl]-5-phenyl-imidazol-4-yl]-~{N}-[2-[4-(2-oxidanylidene-1,3-oxazinan-3-yl)piperidin-1-yl]pyridin-3-yl]-1~{H}-indole-2-carboxamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C40 H37 Cl2 N7 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2018-11-01
_chem_comp.pdbx_modified_date 2019-11-15
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 734.673
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code H0W
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6I29
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
H0W C2 C1 C 0 1 Y N N N N N -12.602 17.322 -3.438 5.484 0.607 2.003 C2 H0W 1
H0W C3 C2 C 0 1 Y N N N N N -13.500 16.249 -3.246 5.283 -0.619 1.398 C3 H0W 2
H0W C41 C3 C 0 1 Y N N N N N -18.829 18.828 -7.436 -3.175 -5.344 1.089 C41 H0W 3
H0W C43 C4 C 0 1 Y N N N N N -17.530 19.332 -7.426 -1.798 -5.266 1.045 C43 H0W 4
H0W C45 C5 C 0 1 Y N N N N N -16.473 18.425 -7.295 -1.188 -4.020 0.970 C45 H0W 5
H0W C48 C6 C 0 1 N N N N N N -18.574 14.562 -8.430 -5.552 -2.249 1.452 C48 H0W 6
H0W C51 C7 C 0 1 N N N N N N -18.702 13.012 -8.373 -6.384 -0.968 1.546 C51 H0W 7
H0W C56 C8 C 0 1 N N N N N N -19.533 13.300 -5.949 -5.048 -0.033 -0.343 C56 H0W 8
H0W C59 C9 C 0 1 N N N N N N -19.420 14.837 -6.075 -4.255 -1.341 -0.383 C59 H0W 9
H0W C12 C10 C 0 1 N N S N N N -14.921 16.253 -3.826 3.886 -1.163 1.243 C12 H0W 10
H0W C15 C11 C 0 1 Y N N N N N -16.485 14.381 -3.509 4.268 -2.169 -1.028 C15 H0W 11
H0W C18 C12 C 0 1 Y N N N N N -15.745 12.895 -4.948 2.695 -1.246 -2.194 C18 H0W 12
H0W C19 C13 C 0 1 Y N N N N N -14.959 13.995 -5.016 2.584 -0.763 -0.898 C19 H0W 13
H0W C20 C14 C 0 1 Y N N N N N -13.762 14.255 -5.877 1.589 0.194 -0.394 C20 H0W 14
H0W C21 C15 C 0 1 Y N N N N N -13.475 15.120 -6.903 0.349 -0.106 0.153 C21 H0W 15
H0W C24 C16 C 0 1 Y N N N N N -11.612 13.983 -6.593 0.522 2.148 0.203 C24 H0W 16
H0W C25 C17 C 0 1 Y N N N N N -12.505 13.466 -5.653 1.713 1.658 -0.361 C25 H0W 17
H0W C26 C18 C 0 1 Y N N N N N -12.187 12.436 -4.765 2.715 2.547 -0.757 C26 H0W 18
H0W C28 C19 C 0 1 Y N N N N N -10.876 11.937 -4.863 2.534 3.891 -0.594 C28 H0W 19
H0W C30 C20 C 0 1 Y N N N N N -9.983 12.451 -5.819 1.360 4.382 -0.038 C30 H0W 20
H0W C4 C21 C 0 1 Y N N N N N -13.087 15.128 -2.491 6.363 -1.347 0.935 C4 H0W 21
H0W C6 C22 C 0 1 Y N N N N N -11.801 15.088 -1.955 7.645 -0.850 1.077 C6 H0W 22
H0W C8 C23 C 0 1 Y N N N N N -10.920 16.152 -2.156 7.847 0.378 1.682 C8 H0W 23
H0W C9 C24 C 0 1 Y N N N N N -11.315 17.277 -2.895 6.765 1.106 2.145 C9 H0W 24
H0W CL1 CL1 CL 0 0 N N N N N N -9.319 16.089 -1.468 9.456 1.004 1.861 CL1 H0W 25
H0W N14 N1 N 0 1 Y N N N N N -15.435 14.883 -4.121 3.595 -1.363 -0.179 N14 H0W 26
H0W N17 N2 N 0 1 Y N N N N N -16.713 13.233 -3.940 3.737 -2.096 -2.217 N17 H0W 27
H0W N22 N3 N 0 1 Y N N N N N -12.227 14.957 -7.294 -0.280 1.072 0.509 N22 H0W 28
H0W C31 C25 C 0 1 Y N N N N N -10.309 13.486 -6.716 0.358 3.522 0.360 C31 H0W 29
H0W CL3 CL2 CL 0 0 N N N N N N -8.382 11.794 -5.869 1.151 6.094 0.160 CL3 H0W 30
H0W C34 C26 C 0 1 N N N N N N -14.350 16.151 -7.496 -0.204 -1.450 0.322 C34 H0W 31
H0W O35 O1 O 0 1 N N N N N N -13.883 16.897 -8.358 0.440 -2.422 -0.031 O35 H0W 32
H0W N36 N4 N 0 1 N N N N N N -15.613 16.200 -7.023 -1.426 -1.613 0.867 N36 H0W 33
H0W C38 C27 C 0 1 Y N N N N N -16.728 17.040 -7.205 -1.994 -2.890 0.943 C38 H0W 34
H0W C39 C28 C 0 1 Y N N N N N -18.058 16.587 -7.198 -3.382 -3.047 0.991 C39 H0W 35
H0W N40 N5 N 0 1 Y N N N N N -19.056 17.498 -7.327 -3.919 -4.254 1.061 N40 H0W 36
H0W N47 N6 N 0 1 N N N N N N -18.389 15.211 -7.097 -4.206 -1.925 0.964 N47 H0W 37
H0W C54 C29 C 0 1 N N N N N N -19.829 12.680 -7.343 -6.465 -0.316 0.163 C54 H0W 38
H0W N62 N7 N 0 1 N N N N N N -20.136 11.245 -7.210 -7.211 0.942 0.258 N62 H0W 39
H0W C63 C30 C 0 1 N N N N N N -19.258 10.324 -6.468 -8.433 1.089 -0.528 C63 H0W 40
H0W C66 C31 C 0 1 N N N N N N -19.546 8.815 -6.670 -9.295 2.214 0.052 C66 H0W 41
H0W C69 C32 C 0 1 N N N N N N -21.080 8.662 -6.656 -8.399 3.438 0.285 C69 H0W 42
H0W O72 O2 O 0 1 N N N N N N -21.686 9.484 -7.670 -7.375 3.072 1.251 O72 H0W 43
H0W C73 C33 C 0 1 N N N N N N -21.307 10.774 -7.752 -6.746 1.901 1.065 C73 H0W 44
H0W O74 O3 O 0 1 N N N N N N -22.092 11.482 -8.379 -5.698 1.707 1.650 O74 H0W 45
H0W C75 C34 C 0 1 Y N N N N N -15.761 11.558 -5.630 1.828 -0.890 -3.340 C75 H0W 46
H0W C76 C35 C 0 1 Y N N N N N -16.234 10.480 -4.845 2.368 -0.797 -4.624 C76 H0W 47
H0W C78 C36 C 0 1 Y N N N N N -16.285 9.188 -5.378 1.555 -0.465 -5.688 C78 H0W 48
H0W C80 C37 C 0 1 Y N N N N N -15.870 8.984 -6.699 0.207 -0.224 -5.484 C80 H0W 49
H0W C82 C38 C 0 1 Y N N N N N -15.386 10.052 -7.495 -0.333 -0.314 -4.214 C82 H0W 50
H0W C84 C39 C 0 1 Y N N N N N -15.339 11.342 -6.952 0.468 -0.651 -3.142 C84 H0W 51
H0W C86 C40 C 0 1 N N N N N N -15.823 17.132 -2.887 3.774 -2.499 1.979 C86 H0W 52
H0W H1 H1 H 0 1 N N N N N N -12.912 18.184 -4.009 4.640 1.178 2.361 H1 H0W 53
H0W H2 H2 H 0 1 N N N N N N -19.664 19.506 -7.532 -3.651 -6.312 1.143 H2 H0W 54
H0W H3 H3 H 0 1 N N N N N N -17.345 20.392 -7.517 -1.199 -6.165 1.069 H3 H0W 55
H0W H4 H4 H 0 1 N N N N N N -15.456 18.787 -7.263 -0.112 -3.933 0.936 H4 H0W 56
H0W H5 H5 H 0 1 N N N N N N -17.708 14.814 -9.059 -5.480 -2.708 2.438 H5 H0W 57
H0W H6 H6 H 0 1 N N N N N N -19.489 14.967 -8.887 -6.032 -2.944 0.762 H6 H0W 58
H0W H7 H7 H 0 1 N N N N N N -18.970 12.619 -9.365 -7.388 -1.211 1.894 H7 H0W 59
H0W H8 H8 H 0 1 N N N N N N -17.750 12.567 -8.047 -5.912 -0.278 2.246 H8 H0W 60
H0W H9 H9 H 0 1 N N N N N N -20.350 13.049 -5.256 -4.556 0.671 0.327 H9 H0W 61
H0W H10 H10 H 0 1 N N N N N N -18.587 12.894 -5.562 -5.098 0.393 -1.346 H10 H0W 62
H0W H11 H11 H 0 1 N N N N N N -19.132 15.259 -5.101 -4.741 -2.040 -1.064 H11 H0W 63
H0W H12 H12 H 0 1 N N N N N N -20.395 15.247 -6.379 -3.241 -1.141 -0.729 H12 H0W 64
H0W H13 H13 H 0 1 N N N N N N -14.866 16.789 -4.785 3.172 -0.455 1.663 H13 H0W 65
H0W H14 H14 H 0 1 N N N N N N -17.062 14.886 -2.749 5.120 -2.779 -0.763 H14 H0W 66
H0W H15 H15 H 0 1 N N N N N N -12.900 12.049 -4.052 3.630 2.172 -1.190 H15 H0W 67
H0W H16 H16 H 0 1 N N N N N N -10.552 11.151 -4.197 3.310 4.577 -0.901 H16 H0W 68
H0W H17 H17 H 0 1 N N N N N N -13.766 14.304 -2.330 6.206 -2.306 0.463 H17 H0W 69
H0W H18 H18 H 0 1 N N N N N N -11.485 14.229 -1.381 8.488 -1.419 0.715 H18 H0W 70
H0W H19 H19 H 0 1 N N N N N N -10.631 18.100 -3.043 6.922 2.065 2.618 H19 H0W 71
H0W H20 H20 H 0 1 N N N N N N -11.791 15.489 -8.020 -1.160 1.132 0.913 H20 H0W 72
H0W H21 H21 H 0 1 N N N N N N -9.608 13.867 -7.443 -0.551 3.913 0.792 H21 H0W 73
H0W H22 H22 H 0 1 N N N N N N -15.804 15.454 -6.385 -1.911 -0.845 1.207 H22 H0W 74
H0W H23 H23 H 0 1 N N N N N N -20.739 13.174 -7.714 -6.973 -0.989 -0.528 H23 H0W 75
H0W H24 H24 H 0 1 N N N N N N -18.222 10.516 -6.784 -8.174 1.327 -1.560 H24 H0W 76
H0W H25 H25 H 0 1 N N N N N N -19.362 10.548 -5.396 -8.995 0.155 -0.503 H25 H0W 77
H0W H26 H26 H 0 1 N N N N N N -19.097 8.229 -5.854 -10.088 2.468 -0.651 H26 H0W 78
H0W H27 H27 H 0 1 N N N N N N -19.138 8.475 -7.633 -9.730 1.892 0.998 H27 H0W 79
H0W H28 H28 H 0 1 N N N N N N -21.463 8.964 -5.670 -7.930 3.735 -0.654 H28 H0W 80
H0W H29 H29 H 0 1 N N N N N N -21.339 7.609 -6.843 -8.995 4.262 0.675 H29 H0W 81
H0W H30 H30 H 0 1 N N N N N N -16.557 10.656 -3.830 3.419 -0.984 -4.784 H30 H0W 82
H0W H31 H31 H 0 1 N N N N N N -16.639 8.361 -4.780 1.971 -0.393 -6.682 H31 H0W 83
H0W H32 H32 H 0 1 N N N N N N -15.920 7.991 -7.121 -0.425 0.037 -6.320 H32 H0W 84
H0W H33 H33 H 0 1 N N N N N N -15.057 9.873 -8.508 -1.386 -0.129 -4.062 H33 H0W 85
H0W H34 H34 H 0 1 N N N N N N -14.979 12.168 -7.548 0.045 -0.721 -2.151 H34 H0W 86
H0W H35 H35 H 0 1 N N N N N N -15.351 18.114 -2.739 4.488 -3.207 1.558 H35 H0W 87
H0W H36 H36 H 0 1 N N N N N N -16.812 17.267 -3.350 3.990 -2.350 3.037 H36 H0W 88
H0W H37 H37 H 0 1 N N N N N N -15.938 16.630 -1.915 2.763 -2.892 1.867 H37 H0W 89
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
H0W C48 C51 SING N N 1
H0W C48 N47 SING N N 2
H0W O74 C73 DOUB N N 3
H0W C51 C54 SING N N 4
H0W O35 C34 DOUB N N 5
H0W C73 O72 SING N N 6
H0W C73 N62 SING N N 7
H0W O72 C69 SING N N 8
H0W C34 N36 SING N N 9
H0W C34 C21 SING N N 10
H0W C82 C84 DOUB Y N 11
H0W C82 C80 SING Y N 12
H0W C41 C43 DOUB Y N 13
H0W C41 N40 SING Y N 14
H0W C43 C45 SING Y N 15
H0W C54 N62 SING N N 16
H0W C54 C56 SING N N 17
H0W N40 C39 DOUB Y N 18
H0W C45 C38 DOUB Y N 19
H0W N22 C21 SING Y N 20
H0W N22 C24 SING Y N 21
H0W N62 C63 SING N N 22
H0W C38 C39 SING Y N 23
H0W C38 N36 SING N N 24
H0W C39 N47 SING N N 25
H0W N47 C59 SING N N 26
H0W C84 C75 SING Y N 27
H0W C21 C20 DOUB Y N 28
H0W C31 C24 DOUB Y N 29
H0W C31 C30 SING Y N 30
H0W C80 C78 DOUB Y N 31
H0W C66 C69 SING N N 32
H0W C66 C63 SING N N 33
H0W C24 C25 SING Y N 34
H0W C59 C56 SING N N 35
H0W C20 C25 SING Y N 36
H0W C20 C19 SING N N 37
H0W CL3 C30 SING N N 38
H0W C30 C28 DOUB Y N 39
H0W C25 C26 DOUB Y N 40
H0W C75 C18 SING N N 41
H0W C75 C76 DOUB Y N 42
H0W C78 C76 SING Y N 43
H0W C19 C18 DOUB Y N 44
H0W C19 N14 SING Y N 45
H0W C18 N17 SING Y N 46
H0W C28 C26 SING Y N 47
H0W N14 C12 SING N N 48
H0W N14 C15 SING Y N 49
H0W N17 C15 DOUB Y N 50
H0W C12 C3 SING N N 51
H0W C12 C86 SING N N 52
H0W C2 C3 DOUB Y N 53
H0W C2 C9 SING Y N 54
H0W C3 C4 SING Y N 55
H0W C9 C8 DOUB Y N 56
H0W C4 C6 DOUB Y N 57
H0W C8 C6 SING Y N 58
H0W C8 CL1 SING N N 59
H0W C2 H1 SING N N 60
H0W C41 H2 SING N N 61
H0W C43 H3 SING N N 62
H0W C45 H4 SING N N 63
H0W C48 H5 SING N N 64
H0W C48 H6 SING N N 65
H0W C51 H7 SING N N 66
H0W C51 H8 SING N N 67
H0W C56 H9 SING N N 68
H0W C56 H10 SING N N 69
H0W C59 H11 SING N N 70
H0W C59 H12 SING N N 71
H0W C12 H13 SING N N 72
H0W C15 H14 SING N N 73
H0W C26 H15 SING N N 74
H0W C28 H16 SING N N 75
H0W C4 H17 SING N N 76
H0W C6 H18 SING N N 77
H0W C9 H19 SING N N 78
H0W N22 H20 SING N N 79
H0W C31 H21 SING N N 80
H0W N36 H22 SING N N 81
H0W C54 H23 SING N N 82
H0W C63 H24 SING N N 83
H0W C63 H25 SING N N 84
H0W C66 H26 SING N N 85
H0W C66 H27 SING N N 86
H0W C69 H28 SING N N 87
H0W C69 H29 SING N N 88
H0W C76 H30 SING N N 89
H0W C78 H31 SING N N 90
H0W C80 H32 SING N N 91
H0W C82 H33 SING N N 92
H0W C84 H34 SING N N 93
H0W C86 H35 SING N N 94
H0W C86 H36 SING N N 95
H0W C86 H37 SING N N 96
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
H0W InChI InChI 1.03 InChI=1S/C40H37Cl2N7O3/c1-25(26-10-12-28(41)13-11-26)49-24-44-35(27-7-3-2-4-8-27)37(49)34-31-15-14-29(42)23-33(31)45-36(34)39(50)46-32-9-5-18-43-38(32)47-20-16-30(17-21-47)48-19-6-22-52-40(48)51/h2-5,7-15,18,23-25,30,45H,6,16-17,19-22H2,1H3,(H,46,50)/t25-/m0/s1
H0W InChIKey InChI 1.03 PEGKHNWZGSKUJH-VWLOTQADSA-N
H0W SMILES_CANONICAL CACTVS 3.385 C[C@H](n1cnc(c2ccccc2)c1c3c([nH]c4cc(Cl)ccc34)C(=O)Nc5cccnc5N6CCC(CC6)N7CCCOC7=O)c8ccc(Cl)cc8
H0W SMILES CACTVS 3.385 C[CH](n1cnc(c2ccccc2)c1c3c([nH]c4cc(Cl)ccc34)C(=O)Nc5cccnc5N6CCC(CC6)N7CCCOC7=O)c8ccc(Cl)cc8
H0W SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 C[C@@H](c1ccc(cc1)Cl)n2cnc(c2c3c4ccc(cc4[nH]c3C(=O)Nc5cccnc5N6CCC(CC6)N7CCCOC7=O)Cl)c8ccccc8
H0W SMILES "OpenEye OEToolkits" 2.0.6 CC(c1ccc(cc1)Cl)n2cnc(c2c3c4ccc(cc4[nH]c3C(=O)Nc5cccnc5N6CCC(CC6)N7CCCOC7=O)Cl)c8ccccc8
#
_pdbx_chem_comp_identifier.comp_id H0W
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.6
_pdbx_chem_comp_identifier.identifier
6-chloranyl-3-[3-[(1~{S})-1-(4-chlorophenyl)ethyl]-5-phenyl-imidazol-4-yl]-~{N}-[2-[4-(2-oxidanylidene-1,3-oxazinan-3-yl)piperidin-1-yl]pyridin-3-yl]-1~{H}-indole-2-carboxamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
H0W 'Create component' 2018-11-01 EBI
H0W 'Initial release' 2019-11-20 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
H0W C2 C 14.077 5.292 1
H0W C3 C 12.585 5.452 2
H0W C41 C 15.942 0.006 3
H0W C43 C 15.192 1.305 4
H0W C45 C 13.692 1.305 5
H0W C48 C 13.692 -3.891 6
H0W C51 C 12.942 -5.190 7
H0W C56 C 10.692 -3.891 8
H0W C59 C 11.442 -2.592 9
H0W C12 C 11.701 4.239 10
H0W C15 C 10.213 5.899 11
H0W C18 C 7.903 5.153 12
H0W C19 C 8.783 3.938 13
H0W C20 C 8.316 2.512 14
H0W C21 C 9.192 1.305 15
H0W C24 C 6.897 0.555 16
H0W C25 C 6.897 2.055 17
H0W C26 C 5.598 2.805 18
H0W C28 C 4.299 2.055 19
H0W C30 C 4.299 0.555 20
H0W C4 C 11.977 6.823 21
H0W C6 C 12.861 8.035 22
H0W C8 C 14.353 7.875 23
H0W C9 C 14.960 6.504 24
H0W CL1 Cl 15.236 9.088 25
H0W N14 N 10.210 4.399 26
H0W N17 N 8.787 6.365 27
H0W N22 N 8.316 0.098 28
H0W C31 C 5.598 -0.195 29
H0W CL3 Cl 3.000 -0.195 30
H0W C34 C 10.692 1.305 31
H0W O35 O 11.442 2.604 32
H0W N36 N 11.442 0.006 33
H0W C38 C 12.942 0.006 34
H0W C39 C 13.692 -1.293 35
H0W N40 N 15.192 -1.293 36
H0W N47 N 12.942 -2.592 37
H0W C54 C 11.442 -5.190 38
H0W N62 N 10.692 -6.489 39
H0W C63 C 9.192 -6.489 40
H0W C66 C 8.442 -7.788 41
H0W C69 C 9.192 -9.088 42
H0W O72 O 10.692 -9.088 43
H0W C73 C 11.442 -7.788 44
H0W O74 O 12.942 -7.788 45
H0W C75 C 6.403 5.155 46
H0W C76 C 5.655 6.456 47
H0W C78 C 4.155 6.458 48
H0W C80 C 3.403 5.161 49
H0W C82 C 4.151 3.860 50
H0W C84 C 5.651 3.858 51
H0W C86 C 12.309 2.868 52
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
H0W C48 C51 SINGLE NONE 1
H0W C48 N47 SINGLE NONE 2
H0W O74 C73 DOUBLE NONE 3
H0W C51 C54 SINGLE NONE 4
H0W O35 C34 DOUBLE NONE 5
H0W C73 O72 SINGLE NONE 6
H0W C73 N62 SINGLE NONE 7
H0W O72 C69 SINGLE NONE 8
H0W C34 N36 SINGLE NONE 9
H0W C34 C21 SINGLE NONE 10
H0W C82 C84 DOUBLE NONE 11
H0W C82 C80 SINGLE NONE 12
H0W C41 C43 DOUBLE NONE 13
H0W C41 N40 SINGLE NONE 14
H0W C43 C45 SINGLE NONE 15
H0W C54 N62 SINGLE NONE 16
H0W C54 C56 SINGLE NONE 17
H0W N40 C39 DOUBLE NONE 18
H0W C45 C38 DOUBLE NONE 19
H0W N22 C21 SINGLE NONE 20
H0W N22 C24 SINGLE NONE 21
H0W N62 C63 SINGLE NONE 22
H0W C38 C39 SINGLE NONE 23
H0W C38 N36 SINGLE NONE 24
H0W C39 N47 SINGLE NONE 25
H0W N47 C59 SINGLE NONE 26
H0W C84 C75 SINGLE NONE 27
H0W C21 C20 DOUBLE NONE 28
H0W C31 C24 DOUBLE NONE 29
H0W C31 C30 SINGLE NONE 30
H0W C80 C78 DOUBLE NONE 31
H0W C66 C69 SINGLE NONE 32
H0W C66 C63 SINGLE NONE 33
H0W C24 C25 SINGLE NONE 34
H0W C59 C56 SINGLE NONE 35
H0W C20 C25 SINGLE NONE 36
H0W C20 C19 SINGLE NONE 37
H0W CL3 C30 SINGLE NONE 38
H0W C30 C28 DOUBLE NONE 39
H0W C25 C26 DOUBLE NONE 40
H0W C75 C18 SINGLE NONE 41
H0W C75 C76 DOUBLE NONE 42
H0W C78 C76 SINGLE NONE 43
H0W C19 C18 DOUBLE NONE 44
H0W C19 N14 SINGLE NONE 45
H0W C18 N17 SINGLE NONE 46
H0W C28 C26 SINGLE NONE 47
H0W N14 C12 SINGLE NONE 48
H0W N14 C15 SINGLE NONE 49
H0W N17 C15 DOUBLE NONE 50
H0W C12 C3 SINGLE NONE 51
H0W C12 C86 SINGLE BEGINDASH 52
H0W C2 C3 DOUBLE NONE 53
H0W C2 C9 SINGLE NONE 54
H0W C3 C4 SINGLE NONE 55
H0W C9 C8 DOUBLE NONE 56
H0W C4 C6 DOUBLE NONE 57
H0W C8 C6 SINGLE NONE 58
H0W C8 CL1 SINGLE NONE 59
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
H0W MurckoScaffold S1 scaffold 'O=C(Nc1cccnc1N1CCC(N2CCCOC2=O)CC1)c1[nH]c2ccccc2c1-c1c(-c2ccccc2)ncn1Cc1ccccc1' InChI=1S/C39H37N7O3/c47-38(43-32-17-9-20-40-37(32)44-22-18-29(19-23-44)46-21-10-24-49-39(46)48)35-33(30-15-7-8-16-31(30)42-35)36-34(28-13-5-2-6-14-28)41-26-45(36)25-27-11-3-1-4-12-27/h1-9,11-17,20,26,29,42H,10,18-19,21-25H2,(H,43,47) YHSWKGCHNRXZQT-UHFFFAOYSA-N
H0W amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
H0W imidazole F2 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
H0W indole F3 fragment 'c1ccc2[nH]ccc2c1' InChI=1S/C8H7N/c1-2-4-8-7(3-1)5-6-9-8/h1-6,9H SIKJAQJRHWYJAI-UHFFFAOYSA-N
H0W phenyl F4 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
H0W pyridine F5 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
H0W pyrrole F6 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
H0W C2 S1 1
H0W C3 S1 1
H0W C41 S1 1
H0W C43 S1 1
H0W C45 S1 1
H0W C48 S1 1
H0W C51 S1 1
H0W C56 S1 1
H0W C59 S1 1
H0W C12 S1 1
H0W C15 S1 1
H0W C18 S1 1
H0W C19 S1 1
H0W C20 S1 1
H0W C21 S1 1
H0W C24 S1 1
H0W C25 S1 1
H0W C26 S1 1
H0W C28 S1 1
H0W C30 S1 1
H0W C4 S1 1
H0W C6 S1 1
H0W C8 S1 1
H0W C9 S1 1
H0W N14 S1 1
H0W N17 S1 1
H0W N22 S1 1
H0W C31 S1 1
H0W C34 S1 1
H0W O35 S1 1
H0W N36 S1 1
H0W C38 S1 1
H0W C39 S1 1
H0W N40 S1 1
H0W N47 S1 1
H0W C54 S1 1
H0W N62 S1 1
H0W C63 S1 1
H0W C66 S1 1
H0W C69 S1 1
H0W O72 S1 1
H0W C73 S1 1
H0W O74 S1 1
H0W C75 S1 1
H0W C76 S1 1
H0W C78 S1 1
H0W C80 S1 1
H0W C82 S1 1
H0W C84 S1 1
H0W N36 F1 1
H0W C34 F1 1
H0W O35 F1 1
H0W C21 F1 1
H0W C18 F2 1
H0W C19 F2 1
H0W N14 F2 1
H0W C15 F2 1
H0W N17 F2 1
H0W C24 F3 1
H0W C25 F3 1
H0W C20 F3 1
H0W C21 F3 1
H0W N22 F3 1
H0W C26 F3 1
H0W C28 F3 1
H0W C30 F3 1
H0W C31 F3 1
H0W C2 F4 1
H0W C3 F4 1
H0W C4 F4 1
H0W C6 F4 1
H0W C8 F4 1
H0W C9 F4 1
H0W C24 F4 2
H0W C31 F4 2
H0W C30 F4 2
H0W C28 F4 2
H0W C26 F4 2
H0W C25 F4 2
H0W C75 F4 3
H0W C84 F4 3
H0W C82 F4 3
H0W C80 F4 3
H0W C78 F4 3
H0W C76 F4 3
H0W C41 F5 1
H0W C43 F5 1
H0W C45 F5 1
H0W C38 F5 1
H0W C39 F5 1
H0W N40 F5 1
H0W C21 F6 1
H0W C20 F6 1
H0W C25 F6 1
H0W C24 F6 1
H0W N22 F6 1
#
_pdbe_chem_comp_rdkit_properties.comp_id H0W
_pdbe_chem_comp_rdkit_properties.exactmw 733.233
_pdbe_chem_comp_rdkit_properties.amw 734.688
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 10
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 9
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 52
_pdbe_chem_comp_rdkit_properties.NumAtoms 89
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 12
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.250
_pdbe_chem_comp_rdkit_properties.NumRings 8
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 6
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 5
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 362.989
_pdbe_chem_comp_rdkit_properties.tpsa 108.380
_pdbe_chem_comp_rdkit_properties.CrippenClogP 7.014
_pdbe_chem_comp_rdkit_properties.CrippenMR 198.297
_pdbe_chem_comp_rdkit_properties.chi0v 26.623
_pdbe_chem_comp_rdkit_properties.chi1v 14.752
_pdbe_chem_comp_rdkit_properties.chi2v 7.162
_pdbe_chem_comp_rdkit_properties.chi3v 7.162
_pdbe_chem_comp_rdkit_properties.chi4v 4.859
_pdbe_chem_comp_rdkit_properties.chi0n 62.111
_pdbe_chem_comp_rdkit_properties.chi1n 32.390
_pdbe_chem_comp_rdkit_properties.chi2n 6.784
_pdbe_chem_comp_rdkit_properties.chi3n 6.784
_pdbe_chem_comp_rdkit_properties.chi4n 4.628
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -5.320
_pdbe_chem_comp_rdkit_properties.kappa1 11.846
_pdbe_chem_comp_rdkit_properties.kappa2 14.363
_pdbe_chem_comp_rdkit_properties.kappa3 6.482
_pdbe_chem_comp_rdkit_properties.Phi 3.272
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
H0W UniChem SureChEMBL SCHEMBL14376877
H0W UniChem PubChem 71155423
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
H0W C2 -1.855 -3.563 0.064 ETKDGv3 1
H0W C3 -0.942 -2.592 0.262 ETKDGv3 2
H0W C41 2.219 4.692 4.670 ETKDGv3 3
H0W C43 0.974 4.986 4.279 ETKDGv3 4
H0W C45 0.393 4.283 3.120 ETKDGv3 5
H0W C48 2.687 0.583 2.412 ETKDGv3 6
H0W C51 2.602 0.001 0.993 ETKDGv3 7
H0W C56 4.921 1.071 0.800 ETKDGv3 8
H0W C59 4.510 2.224 1.735 ETKDGv3 9
H0W C12 -0.954 -1.739 1.517 ETKDGv3 10
H0W C15 -3.422 -1.605 2.307 ETKDGv3 11
H0W C18 -4.121 -0.091 0.919 ETKDGv3 12
H0W C19 -2.796 -0.093 0.801 ETKDGv3 13
H0W C20 -2.021 0.548 -0.276 ETKDGv3 14
H0W C21 -1.028 1.450 -0.130 ETKDGv3 15
H0W C24 -0.987 0.855 -2.315 ETKDGv3 16
H0W C25 -2.045 0.127 -1.672 ETKDGv3 17
H0W C26 -2.752 -0.810 -2.309 ETKDGv3 18
H0W C28 -2.421 -1.069 -3.736 ETKDGv3 19
H0W C30 -1.420 -0.387 -4.340 ETKDGv3 20
H0W C4 0.075 -2.338 -0.794 ETKDGv3 21
H0W C6 0.065 -3.042 -1.931 ETKDGv3 22
H0W C8 -0.954 -4.089 -2.144 ETKDGv3 23
H0W C9 -1.862 -4.340 -1.193 ETKDGv3 24
H0W CL1 -0.975 -4.988 -3.649 ETKDGv3 25
H0W N14 -2.253 -1.069 1.686 ETKDGv3 26
H0W N17 -4.518 -1.058 1.891 ETKDGv3 27
H0W N22 -0.352 1.702 -1.374 ETKDGv3 28
H0W C31 -0.644 0.636 -3.586 ETKDGv3 29
H0W CL3 -1.013 -0.724 -6.012 ETKDGv3 30
H0W C34 -0.637 2.099 1.145 ETKDGv3 31
H0W O35 -1.410 2.047 2.140 ETKDGv3 32
H0W N36 0.633 2.760 1.260 ETKDGv3 33
H0W C38 1.108 3.345 2.479 ETKDGv3 34
H0W C39 2.473 3.020 2.973 ETKDGv3 35
H0W N40 2.967 3.669 3.990 ETKDGv3 36
H0W N47 3.220 1.949 2.382 ETKDGv3 37
H0W C54 3.684 0.554 0.037 ETKDGv3 38
H0W N62 4.035 -0.455 -0.983 ETKDGv3 39
H0W C63 4.829 -1.643 -0.628 ETKDGv3 40
H0W C66 4.214 -2.907 -1.233 ETKDGv3 41
H0W C69 4.108 -2.744 -2.749 ETKDGv3 42
H0W O72 3.381 -1.564 -3.083 ETKDGv3 43
H0W C73 3.410 -0.417 -2.284 ETKDGv3 44
H0W O74 2.838 0.627 -2.696 ETKDGv3 45
H0W C75 -5.087 0.680 0.104 ETKDGv3 46
H0W C76 -6.284 0.146 -0.202 ETKDGv3 47
H0W C78 -7.249 0.900 -1.030 ETKDGv3 48
H0W C80 -6.943 2.126 -1.469 ETKDGv3 49
H0W C82 -5.645 2.733 -1.117 ETKDGv3 50
H0W C84 -4.767 2.054 -0.368 ETKDGv3 51
H0W C86 -0.565 -2.555 2.754 ETKDGv3 52
H0W H1 -2.608 -3.779 0.810 ETKDGv3 53
H0W H2 2.662 5.210 5.510 ETKDGv3 54
H0W H3 0.404 5.749 4.793 ETKDGv3 55
H0W H4 -0.586 4.572 2.760 ETKDGv3 56
H0W H5 3.364 -0.049 3.027 ETKDGv3 57
H0W H6 1.683 0.551 2.889 ETKDGv3 58
H0W H7 2.657 -1.107 1.068 ETKDGv3 59
H0W H8 1.611 0.245 0.562 ETKDGv3 60
H0W H9 5.374 0.260 1.408 ETKDGv3 61
H0W H10 5.687 1.433 0.080 ETKDGv3 62
H0W H11 5.291 2.386 2.508 ETKDGv3 63
H0W H12 4.422 3.153 1.129 ETKDGv3 64
H0W H13 -0.187 -0.945 1.419 ETKDGv3 65
H0W H14 -3.412 -2.405 3.034 ETKDGv3 66
H0W H15 -3.514 -1.384 -1.799 ETKDGv3 67
H0W H16 -2.975 -1.823 -4.279 ETKDGv3 68
H0W H17 0.818 -1.567 -0.664 ETKDGv3 69
H0W H18 0.799 -2.838 -2.699 ETKDGv3 70
H0W H19 -2.613 -5.105 -1.342 ETKDGv3 71
H0W H20 0.440 2.355 -1.562 ETKDGv3 72
H0W H21 0.181 1.167 -4.042 ETKDGv3 73
H0W H22 1.325 2.660 0.487 ETKDGv3 74
H0W H23 3.253 1.448 -0.467 ETKDGv3 75
H0W H24 4.888 -1.774 0.473 ETKDGv3 76
H0W H25 5.864 -1.514 -1.012 ETKDGv3 77
H0W H26 3.202 -3.074 -0.803 ETKDGv3 78
H0W H27 4.851 -3.786 -0.994 ETKDGv3 79
H0W H28 5.126 -2.680 -3.189 ETKDGv3 80
H0W H29 3.593 -3.625 -3.188 ETKDGv3 81
H0W H30 -6.550 -0.850 0.130 ETKDGv3 82
H0W H31 -8.203 0.455 -1.283 ETKDGv3 83
H0W H32 -7.649 2.678 -2.076 ETKDGv3 84
H0W H33 -5.411 3.735 -1.454 ETKDGv3 85
H0W H34 -3.836 2.529 -0.089 ETKDGv3 86
H0W H35 -1.243 -3.422 2.897 ETKDGv3 87
H0W H36 -0.605 -1.911 3.658 ETKDGv3 88
H0W H37 0.473 -2.935 2.641 ETKDGv3 89
#