data_GS2
#
_chem_comp.id GS2
_chem_comp.name
2-[(2-{[1-(N,N-dimethylglycyl)-5-methoxy-1H-indol-6-yl]amino}-7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]-6-fluoro-N-methylbenzamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C27 H27 F N8 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2008-09-24
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 530.553
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code GS2
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3EKK
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
GS2 C1 C1 C 0 1 N N N N N N -12.237 23.692 -19.726 -7.011 1.927 -2.353 C1 GS2 1
GS2 N1 N1 N 0 1 N N N N N N -10.952 23.885 -20.352 -6.345 0.886 -1.565 N1 GS2 2
GS2 C2 C2 C 0 1 N N N N N N -9.811 23.982 -19.591 -6.178 1.049 -0.237 C2 GS2 3
GS2 O1 O1 O 0 1 N N N N N N -9.767 24.027 -18.366 -6.580 2.061 0.306 O1 GS2 4
GS2 C3 C3 C 0 1 Y N N N N N -8.561 24.084 -20.376 -5.510 0.003 0.555 C3 GS2 5
GS2 C4 C4 C 0 1 Y N N N N N -8.612 24.649 -21.634 -6.258 -1.028 1.134 C4 GS2 6
GS2 F1 F1 F 0 1 N N N N N N -9.786 25.079 -22.134 -7.598 -1.068 0.968 F1 GS2 7
GS2 C5 C5 C 0 1 Y N N N N N -7.469 24.780 -22.388 -5.622 -2.006 1.875 C5 GS2 8
GS2 C6 C6 C 0 1 Y N N N N N -6.275 24.333 -21.868 -4.250 -1.971 2.048 C6 GS2 9
GS2 C7 C7 C 0 1 Y N N N N N -6.229 23.766 -20.614 -3.499 -0.959 1.483 C7 GS2 10
GS2 C8 C8 C 0 1 Y N N N N N -7.367 23.631 -19.845 -4.117 0.030 0.730 C8 GS2 11
GS2 N2 N2 N 0 1 N N N N N N -7.335 23.064 -18.555 -3.360 1.046 0.156 N2 GS2 12
GS2 C9 C9 C 0 1 Y N N N N N -6.356 22.195 -18.035 -2.018 0.841 -0.116 C9 GS2 13
GS2 N3 N3 N 0 1 Y N N N N N -5.287 21.751 -18.714 -1.466 -0.356 0.049 N3 GS2 14
GS2 C10 C10 C 0 1 Y N N N N N -4.401 20.925 -18.135 -0.180 -0.557 -0.210 C10 GS2 15
GS2 N4 N4 N 0 1 N N N N N N -3.286 20.456 -18.854 0.348 -1.825 -0.023 N4 GS2 16
GS2 C11 C11 C 0 1 Y N N N N N -2.914 20.788 -20.176 1.724 -2.038 -0.165 C11 GS2 17
GS2 C12 C12 C 0 1 Y N N N N N -3.834 20.954 -21.200 2.606 -0.990 0.028 C12 GS2 18
GS2 C13 C13 C 0 1 Y N N N N N -3.369 21.276 -22.459 3.972 -1.198 -0.113 C13 GS2 19
GS2 N5 N5 N 0 1 Y N N N N N -4.085 21.503 -23.642 5.076 -0.371 0.012 N5 GS2 20
GS2 C14 C14 C 0 1 Y N N N N N -3.156 21.815 -24.717 6.223 -1.090 -0.236 C14 GS2 21
GS2 C15 C15 C 0 1 Y N N N N N -1.760 21.780 -24.127 5.911 -2.361 -0.520 C15 GS2 22
GS2 C16 C16 C 0 1 Y N N N N N -2.036 21.431 -22.712 4.450 -2.476 -0.450 C16 GS2 23
GS2 C17 C17 C 0 1 Y N N N N N -1.108 21.263 -21.713 3.553 -3.529 -0.643 C17 GS2 24
GS2 C18 C18 C 0 1 Y N N N N N -1.565 20.937 -20.449 2.199 -3.311 -0.496 C18 GS2 25
GS2 O2 O2 O 0 1 N N N N N N -0.683 20.746 -19.390 1.323 -4.335 -0.678 O2 GS2 26
GS2 C19 C19 C 0 1 N N N N N N 0.651 20.689 -19.876 1.875 -5.609 -1.015 C19 GS2 27
GS2 C20 C20 C 0 1 N N N N N N -5.459 21.372 -23.785 5.034 0.939 0.328 C20 GS2 28
GS2 O3 O3 O 0 1 N N N N N N -6.158 20.701 -23.034 3.968 1.480 0.528 O3 GS2 29
GS2 C21 C21 C 0 1 N N N N N N -6.036 22.031 -25.008 6.312 1.730 0.433 C21 GS2 30
GS2 N6 N6 N 0 1 N N N N N N -7.421 21.549 -25.277 5.999 3.122 0.786 N6 GS2 31
GS2 C22 C22 C 0 1 N N N N N N -8.448 22.188 -24.420 5.424 3.205 2.135 C22 GS2 32
GS2 C23 C23 C 0 1 N N N N N N -7.806 21.719 -26.701 7.188 3.976 0.666 C23 GS2 33
GS2 N7 N7 N 0 1 Y N N N N N -4.475 20.468 -16.877 0.617 0.406 -0.641 N7 GS2 34
GS2 C24 C24 C 0 1 Y N N N N N -5.543 20.916 -16.226 0.150 1.638 -0.835 C24 GS2 35
GS2 N8 N8 N 0 1 Y N N N N N -5.882 20.616 -14.936 0.706 2.813 -1.260 N8 GS2 36
GS2 C25 C25 C 0 1 Y N N N N N -7.035 21.261 -14.592 -0.244 3.804 -1.277 C25 GS2 37
GS2 C26 C26 C 0 1 Y N N N N N -7.443 21.982 -15.691 -1.424 3.309 -0.871 C26 GS2 38
GS2 C27 C27 C 0 1 Y N N N N N -6.499 21.764 -16.729 -1.210 1.892 -0.577 C27 GS2 39
GS2 H1 H1 H 0 1 N N N N N N -12.110 23.643 -18.634 -7.053 1.620 -3.398 H1 GS2 40
GS2 H1A H1A H 0 1 N N N N N N -12.899 24.533 -19.980 -8.023 2.077 -1.976 H1A GS2 41
GS2 H1B H1B H 0 1 N N N N N N -12.682 22.753 -20.086 -6.451 2.858 -2.270 H1B GS2 42
GS2 HN1 HN1 H 0 1 N N N N N N -10.890 23.949 -21.348 -6.026 0.079 -1.998 HN1 GS2 43
GS2 H5 H5 H 0 1 N N N N N N -7.507 25.226 -23.371 -6.200 -2.802 2.322 H5 GS2 44
GS2 H6 H6 H 0 1 N N N N N N -5.369 24.428 -22.447 -3.762 -2.739 2.629 H6 GS2 45
GS2 H7 H7 H 0 1 N N N N N N -5.283 23.420 -20.224 -2.428 -0.939 1.624 H7 GS2 46
GS2 HN2 HN2 H 0 1 N N N N N N -8.088 23.305 -17.943 -3.773 1.898 -0.055 HN2 GS2 47
GS2 HN4 HN4 H 0 1 N N N N N N -2.688 19.814 -18.374 -0.236 -2.564 0.208 HN4 GS2 48
GS2 H12 H12 H 0 1 N N N N N N -4.891 20.834 -21.016 2.233 -0.010 0.287 H12 GS2 49
GS2 H14 H14 H 0 1 N N N N N N -3.413 22.031 -25.744 7.226 -0.689 -0.207 H14 GS2 50
GS2 H15 H15 H 0 1 N N N N N N -0.812 21.962 -24.611 6.605 -3.154 -0.757 H15 GS2 51
GS2 H17 H17 H 0 1 N N N N N N -0.053 21.382 -21.909 3.919 -4.511 -0.904 H17 GS2 52
GS2 H19 H19 H 0 1 N N N N N N 0.641 20.674 -20.976 2.546 -5.936 -0.220 H19 GS2 53
GS2 H19A H19A H 0 0 N N N N N N 1.206 21.572 -19.526 1.071 -6.335 -1.131 H19A GS2 54
GS2 H19B H19B H 0 0 N N N N N N 1.139 19.777 -19.502 2.431 -5.529 -1.949 H19B GS2 55
GS2 H21 H21 H 0 1 N N N N N N -6.062 23.119 -24.848 6.947 1.294 1.203 H21 GS2 56
GS2 H21A H21A H 0 0 N N N N N N -5.404 21.778 -25.872 6.833 1.707 -0.524 H21A GS2 57
GS2 H22 H22 H 0 1 N N N N N N -8.038 22.346 -23.412 6.138 2.813 2.859 H22 GS2 58
GS2 H22A H22A H 0 0 N N N N N N -8.737 23.156 -24.854 5.201 4.246 2.371 H22A GS2 59
GS2 H22B H22B H 0 0 N N N N N N -9.331 21.535 -24.358 4.506 2.619 2.176 H22B GS2 60
GS2 H23 H23 H 0 1 N N N N N N -8.902 21.761 -26.783 7.552 3.950 -0.361 H23 GS2 61
GS2 H23A H23A H 0 0 N N N N N N -7.374 22.653 -27.089 6.928 5.000 0.933 H23A GS2 62
GS2 H23B H23B H 0 0 N N N N N N -7.427 20.869 -27.287 7.966 3.612 1.337 H23B GS2 63
GS2 HN8 HN8 H 0 1 N N N N N N -5.361 20.012 -14.332 1.636 2.930 -1.512 HN8 GS2 64
GS2 H25 H25 H 0 1 N N N N N N -7.534 21.214 -13.635 -0.069 4.827 -1.573 H25 GS2 65
GS2 H26 H26 H 0 1 N N N N N N -8.324 22.603 -15.753 -2.353 3.851 -0.782 H26 GS2 66
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
GS2 C1 N1 SING N N 1
GS2 N1 C2 SING N N 2
GS2 C2 O1 DOUB N N 3
GS2 C2 C3 SING N N 4
GS2 C3 C4 DOUB Y N 5
GS2 C3 C8 SING Y N 6
GS2 C4 F1 SING N N 7
GS2 C4 C5 SING Y N 8
GS2 C5 C6 DOUB Y N 9
GS2 C6 C7 SING Y N 10
GS2 C7 C8 DOUB Y N 11
GS2 C8 N2 SING N N 12
GS2 N2 C9 SING N N 13
GS2 C9 N3 DOUB Y N 14
GS2 C9 C27 SING Y N 15
GS2 N3 C10 SING Y N 16
GS2 C10 N4 SING N N 17
GS2 C10 N7 DOUB Y N 18
GS2 N4 C11 SING N N 19
GS2 C11 C12 DOUB Y N 20
GS2 C11 C18 SING Y N 21
GS2 C12 C13 SING Y N 22
GS2 C13 N5 SING Y N 23
GS2 C13 C16 DOUB Y N 24
GS2 N5 C14 SING Y N 25
GS2 N5 C20 SING N N 26
GS2 C14 C15 DOUB Y N 27
GS2 C15 C16 SING Y N 28
GS2 C16 C17 SING Y N 29
GS2 C17 C18 DOUB Y N 30
GS2 C18 O2 SING N N 31
GS2 O2 C19 SING N N 32
GS2 C20 O3 DOUB N N 33
GS2 C20 C21 SING N N 34
GS2 C21 N6 SING N N 35
GS2 N6 C22 SING N N 36
GS2 N6 C23 SING N N 37
GS2 N7 C24 SING Y N 38
GS2 C24 N8 SING Y N 39
GS2 C24 C27 DOUB Y N 40
GS2 N8 C25 SING Y N 41
GS2 C25 C26 DOUB Y N 42
GS2 C26 C27 SING Y N 43
GS2 C1 H1 SING N N 44
GS2 C1 H1A SING N N 45
GS2 C1 H1B SING N N 46
GS2 N1 HN1 SING N N 47
GS2 C5 H5 SING N N 48
GS2 C6 H6 SING N N 49
GS2 C7 H7 SING N N 50
GS2 N2 HN2 SING N N 51
GS2 N4 HN4 SING N N 52
GS2 C12 H12 SING N N 53
GS2 C14 H14 SING N N 54
GS2 C15 H15 SING N N 55
GS2 C17 H17 SING N N 56
GS2 C19 H19 SING N N 57
GS2 C19 H19A SING N N 58
GS2 C19 H19B SING N N 59
GS2 C21 H21 SING N N 60
GS2 C21 H21A SING N N 61
GS2 C22 H22 SING N N 62
GS2 C22 H22A SING N N 63
GS2 C22 H22B SING N N 64
GS2 C23 H23 SING N N 65
GS2 C23 H23A SING N N 66
GS2 C23 H23B SING N N 67
GS2 N8 HN8 SING N N 68
GS2 C25 H25 SING N N 69
GS2 C26 H26 SING N N 70
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
GS2 SMILES ACDLabs 10.04 O=C(n2c1cc(c(OC)cc1cc2)Nc3nc5c(c(n3)Nc4cccc(F)c4C(=O)NC)ccn5)CN(C)C
GS2 SMILES_CANONICAL CACTVS 3.341 CNC(=O)c1c(F)cccc1Nc2nc(Nc3cc4n(ccc4cc3OC)C(=O)CN(C)C)nc5[nH]ccc25
GS2 SMILES CACTVS 3.341 CNC(=O)c1c(F)cccc1Nc2nc(Nc3cc4n(ccc4cc3OC)C(=O)CN(C)C)nc5[nH]ccc25
GS2 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 CNC(=O)c1c(cccc1F)Nc2c3cc[nH]c3nc(n2)Nc4cc5c(ccn5C(=O)CN(C)C)cc4OC
GS2 SMILES "OpenEye OEToolkits" 1.5.0 CNC(=O)c1c(cccc1F)Nc2c3cc[nH]c3nc(n2)Nc4cc5c(ccn5C(=O)CN(C)C)cc4OC
GS2 InChI InChI 1.03 InChI=1S/C27H27FN8O3/c1-29-26(38)23-17(28)6-5-7-18(23)31-25-16-8-10-30-24(16)33-27(34-25)32-19-13-20-15(12-21(19)39-4)9-11-36(20)22(37)14-35(2)3/h5-13H,14H2,1-4H3,(H,29,38)(H3,30,31,32,33,34)
GS2 InChIKey InChI 1.03 DESOLSKAHZZIGK-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
GS2 "SYSTEMATIC NAME" ACDLabs 10.04 2-[(2-{[1-(N,N-dimethylglycyl)-5-methoxy-1H-indol-6-yl]amino}-7H-pyrrolo[2,3-d]pyrimidin-4-yl)amino]-6-fluoro-N-methylbenzamide
GS2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 2-[[2-[[1-(2-dimethylaminoethanoyl)-5-methoxy-indol-6-yl]amino]-7H-pyrrolo[3,2-e]pyrimidin-4-yl]amino]-6-fluoro-N-methyl-benzamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
GS2 'Create component' 2008-09-24 RCSB
GS2 'Modify aromatic_flag' 2011-06-04 RCSB
GS2 'Modify descriptor' 2011-06-04 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
GS2 C1 C 11.643 8.057 1
GS2 N1 N 12.942 7.307 2
GS2 C2 C 12.942 5.807 3
GS2 O1 O 14.241 5.057 4
GS2 C3 C 11.643 5.057 5
GS2 C4 C 10.344 5.807 6
GS2 F1 F 10.344 7.307 7
GS2 C5 C 9.045 5.057 8
GS2 C6 C 9.045 3.557 9
GS2 C7 C 10.344 2.807 10
GS2 C8 C 11.643 3.557 11
GS2 N2 N 12.942 2.807 12
GS2 C9 C 12.942 1.307 13
GS2 N3 N 11.643 0.557 14
GS2 C10 C 11.643 -0.943 15
GS2 N4 N 10.344 -1.693 16
GS2 C11 C 10.344 -3.193 17
GS2 C12 C 9.045 -3.943 18
GS2 C13 C 9.045 -5.443 19
GS2 N5 N 7.939 -6.443 20
GS2 C14 C 8.547 -7.805 21
GS2 C15 C 10.030 -7.650 22
GS2 C16 C 10.344 -6.193 23
GS2 C17 C 11.643 -5.443 24
GS2 C18 C 11.643 -3.943 25
GS2 O2 O 12.942 -3.193 26
GS2 C19 C 14.241 -3.943 27
GS2 C20 C 6.471 -6.134 28
GS2 O3 O 6.005 -4.708 29
GS2 C21 C 5.470 -7.250 30
GS2 N6 N 4.002 -6.941 31
GS2 C22 C 3.000 -8.057 32
GS2 C23 C 3.536 -5.515 33
GS2 N7 N 12.942 -1.693 34
GS2 C24 C 14.241 -0.943 35
GS2 N8 N 15.660 -1.400 36
GS2 C25 C 16.535 -0.193 37
GS2 C26 C 15.660 1.015 38
GS2 C27 C 14.241 0.557 39
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
GS2 C1 N1 SINGLE NONE 1
GS2 N1 C2 SINGLE NONE 2
GS2 C2 O1 DOUBLE NONE 3
GS2 C2 C3 SINGLE NONE 4
GS2 C3 C4 DOUBLE NONE 5
GS2 C3 C8 SINGLE NONE 6
GS2 C4 F1 SINGLE NONE 7
GS2 C4 C5 SINGLE NONE 8
GS2 C5 C6 DOUBLE NONE 9
GS2 C6 C7 SINGLE NONE 10
GS2 C7 C8 DOUBLE NONE 11
GS2 C8 N2 SINGLE NONE 12
GS2 N2 C9 SINGLE NONE 13
GS2 C9 N3 DOUBLE NONE 14
GS2 C9 C27 SINGLE NONE 15
GS2 N3 C10 SINGLE NONE 16
GS2 C10 N4 SINGLE NONE 17
GS2 C10 N7 DOUBLE NONE 18
GS2 N4 C11 SINGLE NONE 19
GS2 C11 C12 DOUBLE NONE 20
GS2 C11 C18 SINGLE NONE 21
GS2 C12 C13 SINGLE NONE 22
GS2 C13 N5 SINGLE NONE 23
GS2 C13 C16 DOUBLE NONE 24
GS2 N5 C14 SINGLE NONE 25
GS2 N5 C20 SINGLE NONE 26
GS2 C14 C15 DOUBLE NONE 27
GS2 C15 C16 SINGLE NONE 28
GS2 C16 C17 SINGLE NONE 29
GS2 C17 C18 DOUBLE NONE 30
GS2 C18 O2 SINGLE NONE 31
GS2 O2 C19 SINGLE NONE 32
GS2 C20 O3 DOUBLE NONE 33
GS2 C20 C21 SINGLE NONE 34
GS2 C21 N6 SINGLE NONE 35
GS2 N6 C22 SINGLE NONE 36
GS2 N6 C23 SINGLE NONE 37
GS2 N7 C24 SINGLE NONE 38
GS2 C24 N8 SINGLE NONE 39
GS2 C24 C27 DOUBLE NONE 40
GS2 N8 C25 SINGLE NONE 41
GS2 C25 C26 DOUBLE NONE 42
GS2 C26 C27 SINGLE NONE 43
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
GS2 MurckoScaffold S1 scaffold 'c1ccc(Nc2nc(Nc3ccc4cc[nH]c4c3)nc3[nH]ccc23)cc1' InChI=1S/C20H16N6/c1-2-4-14(5-3-1)23-19-16-9-11-22-18(16)25-20(26-19)24-15-7-6-13-8-10-21-17(13)12-15/h1-12,21H,(H3,22,23,24,25,26) YPVUKSOJOFDETR-UHFFFAOYSA-N
GS2 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
GS2 indole F2 fragment 'c1ccc2[nH]ccc2c1' InChI=1S/C8H7N/c1-2-4-8-7(3-1)5-6-9-8/h1-6,9H SIKJAQJRHWYJAI-UHFFFAOYSA-N
GS2 peptide F3 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
GS2 phenyl F4 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
GS2 pyrimidine F5 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
GS2 pyrrole F6 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N
GS2 Z54628578 F7 fragment CNc1ncccn1 InChI=1S/C5H7N3/c1-6-5-7-3-2-4-8-5/h2-4H,1H3,(H,6,7,8) BQNXHDSGGRTFNX-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
GS2 C3 S1 1
GS2 C4 S1 1
GS2 C5 S1 1
GS2 C6 S1 1
GS2 C7 S1 1
GS2 C8 S1 1
GS2 N2 S1 1
GS2 C9 S1 1
GS2 N3 S1 1
GS2 C10 S1 1
GS2 N4 S1 1
GS2 C11 S1 1
GS2 C12 S1 1
GS2 C13 S1 1
GS2 N5 S1 1
GS2 C14 S1 1
GS2 C15 S1 1
GS2 C16 S1 1
GS2 C17 S1 1
GS2 C18 S1 1
GS2 N7 S1 1
GS2 C24 S1 1
GS2 N8 S1 1
GS2 C25 S1 1
GS2 C26 S1 1
GS2 C27 S1 1
GS2 N1 F1 1
GS2 C2 F1 1
GS2 O1 F1 1
GS2 C3 F1 1
GS2 C13 F2 1
GS2 C16 F2 1
GS2 C15 F2 1
GS2 C14 F2 1
GS2 N5 F2 1
GS2 C17 F2 1
GS2 C18 F2 1
GS2 C11 F2 1
GS2 C12 F2 1
GS2 O3 F3 1
GS2 C20 F3 1
GS2 C21 F3 1
GS2 N6 F3 1
GS2 C3 F4 1
GS2 C4 F4 1
GS2 C5 F4 1
GS2 C6 F4 1
GS2 C7 F4 1
GS2 C8 F4 1
GS2 C11 F4 2
GS2 C12 F4 2
GS2 C13 F4 2
GS2 C16 F4 2
GS2 C17 F4 2
GS2 C18 F4 2
GS2 C27 F5 1
GS2 C9 F5 1
GS2 N3 F5 1
GS2 C10 F5 1
GS2 N7 F5 1
GS2 C24 F5 1
GS2 C13 F6 1
GS2 C16 F6 1
GS2 C15 F6 1
GS2 C14 F6 1
GS2 N5 F6 1
GS2 C24 F6 2
GS2 C27 F6 2
GS2 C26 F6 2
GS2 C25 F6 2
GS2 N8 F6 2
GS2 C11 F7 1
GS2 N4 F7 1
GS2 C10 F7 1
GS2 N3 F7 1
GS2 C9 F7 1
GS2 C27 F7 1
GS2 C24 F7 1
GS2 N7 F7 1
#
_pdbe_chem_comp_rdkit_properties.comp_id GS2
_pdbe_chem_comp_rdkit_properties.exactmw 530.219
_pdbe_chem_comp_rdkit_properties.amw 530.564
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 11
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 4
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 12
_pdbe_chem_comp_rdkit_properties.NumHBD 4
_pdbe_chem_comp_rdkit_properties.NumHBA 9
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 39
_pdbe_chem_comp_rdkit_properties.NumAtoms 66
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 12
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.185
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 5
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 260.709
_pdbe_chem_comp_rdkit_properties.tpsa 129.200
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.213
_pdbe_chem_comp_rdkit_properties.CrippenMR 139.331
_pdbe_chem_comp_rdkit_properties.chi0v 18.680
_pdbe_chem_comp_rdkit_properties.chi1v 10.030
_pdbe_chem_comp_rdkit_properties.chi2v 4.712
_pdbe_chem_comp_rdkit_properties.chi3v 4.712
_pdbe_chem_comp_rdkit_properties.chi4v 3.142
_pdbe_chem_comp_rdkit_properties.chi0n 45.680
_pdbe_chem_comp_rdkit_properties.chi1n 23.319
_pdbe_chem_comp_rdkit_properties.chi2n 4.712
_pdbe_chem_comp_rdkit_properties.chi3n 4.712
_pdbe_chem_comp_rdkit_properties.chi4n 3.142
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.970
_pdbe_chem_comp_rdkit_properties.kappa1 8.779
_pdbe_chem_comp_rdkit_properties.kappa2 10.419
_pdbe_chem_comp_rdkit_properties.kappa3 4.966
_pdbe_chem_comp_rdkit_properties.Phi 2.345
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
GS2 UniChem fdasrs W6545R69M8
GS2 UniChem PubChem 25113169
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
GS2 C1 -1.907 -0.350 -2.342 ETKDGv3 1
GS2 N1 -3.115 -0.409 -1.528 ETKDGv3 2
GS2 C2 -3.800 0.779 -1.111 ETKDGv3 3
GS2 O1 -3.392 1.910 -1.492 ETKDGv3 4
GS2 C3 -4.956 0.697 -0.193 ETKDGv3 5
GS2 C4 -5.987 -0.125 -0.478 ETKDGv3 6
GS2 F1 -5.969 -0.910 -1.586 ETKDGv3 7
GS2 C5 -7.195 -0.127 0.371 ETKDGv3 8
GS2 C6 -7.285 0.700 1.416 ETKDGv3 9
GS2 C7 -6.161 1.595 1.749 ETKDGv3 10
GS2 C8 -5.036 1.580 1.016 ETKDGv3 11
GS2 N2 -3.931 2.407 1.420 ETKDGv3 12
GS2 C9 -2.585 1.919 1.510 ETKDGv3 13
GS2 N3 -2.331 0.636 1.487 ETKDGv3 14
GS2 C10 -0.975 0.127 1.516 ETKDGv3 15
GS2 N4 -0.757 -1.289 1.456 ETKDGv3 16
GS2 C11 0.479 -1.899 1.045 ETKDGv3 17
GS2 C12 1.230 -1.345 0.066 ETKDGv3 18
GS2 C13 2.471 -2.024 -0.346 ETKDGv3 19
GS2 N5 3.436 -1.601 -1.305 ETKDGv3 20
GS2 C14 4.448 -2.611 -1.246 ETKDGv3 21
GS2 C15 4.133 -3.543 -0.349 ETKDGv3 22
GS2 C16 2.852 -3.147 0.226 ETKDGv3 23
GS2 C17 2.050 -3.793 1.274 ETKDGv3 24
GS2 C18 0.899 -3.198 1.670 ETKDGv3 25
GS2 O2 0.076 -3.752 2.664 ETKDGv3 26
GS2 C19 0.340 -4.973 3.349 ETKDGv3 27
GS2 C20 3.362 -0.499 -2.222 ETKDGv3 28
GS2 O3 2.248 0.031 -2.481 ETKDGv3 29
GS2 C21 4.592 -0.007 -2.935 ETKDGv3 30
GS2 N6 4.532 1.455 -3.144 ETKDGv3 31
GS2 C22 5.525 1.860 -4.151 ETKDGv3 32
GS2 C23 4.788 2.175 -1.883 ETKDGv3 33
GS2 N7 0.035 0.956 1.600 ETKDGv3 34
GS2 C24 -0.227 2.362 1.653 ETKDGv3 35
GS2 N8 0.740 3.396 1.673 ETKDGv3 36
GS2 C25 -0.051 4.586 1.634 ETKDGv3 37
GS2 C26 -1.354 4.296 1.597 ETKDGv3 38
GS2 C27 -1.447 2.841 1.612 ETKDGv3 39
GS2 H1 -2.144 0.092 -3.333 ETKDGv3 40
GS2 H1A -1.139 0.269 -1.833 ETKDGv3 41
GS2 H1B -1.501 -1.372 -2.490 ETKDGv3 42
GS2 HN1 -3.433 -1.340 -1.174 ETKDGv3 43
GS2 H5 -8.019 -0.787 0.131 ETKDGv3 44
GS2 H6 -8.177 0.705 2.029 ETKDGv3 45
GS2 H7 -6.238 2.233 2.621 ETKDGv3 46
GS2 HN2 -4.132 3.371 1.770 ETKDGv3 47
GS2 HN4 -1.546 -1.912 1.741 ETKDGv3 48
GS2 H12 0.923 -0.432 -0.421 ETKDGv3 49
GS2 H14 5.336 -2.631 -1.864 ETKDGv3 50
GS2 H15 4.716 -4.421 -0.109 ETKDGv3 51
GS2 H17 2.394 -4.723 1.705 ETKDGv3 52
GS2 H19 0.378 -5.816 2.626 ETKDGv3 53
GS2 H19A 1.298 -4.901 3.905 ETKDGv3 54
GS2 H19B -0.477 -5.165 4.074 ETKDGv3 55
GS2 H21 4.632 -0.538 -3.911 ETKDGv3 56
GS2 H21A 5.508 -0.281 -2.365 ETKDGv3 57
GS2 H22 6.556 1.576 -3.840 ETKDGv3 58
GS2 H22A 5.485 2.959 -4.312 ETKDGv3 59
GS2 H22B 5.296 1.381 -5.128 ETKDGv3 60
GS2 H23 4.031 1.899 -1.118 ETKDGv3 61
GS2 H23A 4.700 3.271 -2.045 ETKDGv3 62
GS2 H23B 5.802 1.949 -1.485 ETKDGv3 63
GS2 HN8 1.780 3.310 1.667 ETKDGv3 64
GS2 H25 0.359 5.587 1.624 ETKDGv3 65
GS2 H26 -2.165 5.010 1.550 ETKDGv3 66
#