data_GG2
#
_chem_comp.id GG2
_chem_comp.name
1-(4-METHOXYPHENYL)-7-OXO-6-[4-(2-OXOPIPERIDIN-1-YL)PHENYL]-4,5,6,7-TETRAHYDRO-1H-PYRAZOLO[3,4-C]PYRIDINE-3-CARBOXAMIDE
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C25 H25 N5 O4"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2007-03-09
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag ?
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 459.497
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code GG2
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details "OpenEye OEToolkits"
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code ?
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
GG2 C1 C1 C 0 1 Y N N N N N 10.979 45.496 65.652 7.169 10.434 -2.106 C1 GG2 1
GG2 C2 C2 C 0 1 Y N N N N N 10.581 46.554 64.716 6.104 10.490 -3.005 C2 GG2 2
GG2 C3 C3 C 0 1 Y N N N N N 9.190 46.614 64.244 4.826 10.818 -2.553 C3 GG2 3
GG2 O4 O4 O 0 1 N N N N N N 12.327 45.498 66.028 8.416 10.114 -2.548 O4 GG2 4
GG2 N6 N6 N 0 1 N N N N N N 5.888 46.333 64.933 2.960 12.704 -0.745 N6 GG2 5
GG2 C7 C7 C 0 1 Y N N N N N 6.378 42.357 60.606 1.113 7.109 0.478 C7 GG2 6
GG2 C8 C8 C 0 1 N N N N N N 6.817 44.086 62.265 2.449 9.115 -0.177 C8 GG2 7
GG2 C10 C10 C 0 1 N N N N N N 4.691 46.116 64.363 1.713 12.652 -0.266 C10 GG2 8
GG2 C11 C11 C 0 1 N N N N N N 3.455 46.605 64.815 0.963 13.864 -0.101 C11 GG2 9
GG2 C12 C12 C 0 1 N N N N N N 4.943 45.249 63.299 1.309 11.339 0.024 C12 GG2 10
GG2 C13 C13 C 0 1 N N N N N N 6.295 44.953 63.239 2.385 10.552 -0.307 C13 GG2 11
GG2 C14 C14 C 0 1 Y N N N N N 7.689 41.873 58.523 -0.167 5.067 0.502 C14 GG2 12
GG2 C15 C15 C 0 1 N N N N N N 12.924 44.517 66.876 9.459 10.075 -1.575 C15 GG2 13
GG2 C16 C16 C 0 1 Y N N N N N 7.447 40.452 58.792 0.932 4.388 1.029 C16 GG2 14
GG2 C19 C19 C 0 1 N N N N N N 7.161 39.042 56.935 1.970 2.144 1.241 C19 GG2 15
GG2 C20 C20 C 0 1 N N N N N N 9.375 39.108 58.089 -0.512 2.403 1.477 C20 GG2 16
GG2 C21 C21 C 0 1 N N N N N N 9.764 37.851 57.331 -0.556 1.117 2.284 C21 GG2 17
GG2 C22 C22 C 0 1 Y N N N N N 6.134 40.930 60.860 2.211 6.437 1.004 C22 GG2 18
GG2 C24 C24 C 0 1 N N N N N N 4.486 43.296 61.923 -0.059 9.302 0.098 C24 GG2 19
GG2 C4 C4 C 0 1 Y N N N N N 8.220 45.612 64.725 4.624 11.086 -1.205 C4 GG2 20
GG2 C5 C5 C 0 1 Y N N N N N 8.623 44.564 65.671 5.678 11.033 -0.302 C5 GG2 21
GG2 C6 C6 C 0 1 Y N N N N N 10.005 44.503 66.137 6.956 10.706 -0.755 C6 GG2 22
GG2 N1 N1 N 0 1 N N N N N N 6.879 45.636 64.278 3.346 11.414 -0.753 N1 GG2 23
GG2 N5 N5 N 0 1 N N N N N N 5.927 43.276 61.557 1.207 8.520 0.193 N5 GG2 24
GG2 C44 C44 C 0 1 Y N N N N N 7.129 42.842 59.438 -0.076 6.431 0.226 C44 GG2 25
GG2 N2 N2 N 0 1 N N N N N N 7.959 39.518 57.931 0.836 2.973 1.318 N2 GG2 26
GG2 C18 C18 C 0 1 Y N N N N N 6.670 39.960 59.932 2.121 5.072 1.281 C18 GG2 27
GG2 O3 O3 O 0 1 N N N N N N 8.034 44.070 62.079 3.492 8.503 -0.396 O3 GG2 28
GG2 C25 C25 C 0 1 N N N N N N 9.235 37.991 55.920 0.460 0.145 1.725 C25 GG2 29
GG2 O2 O2 O 0 1 N N N N N N 5.995 39.404 56.782 3.066 2.472 0.779 O2 GG2 30
GG2 C23 C23 C 0 1 N N N N N N 7.714 37.991 55.989 1.838 0.758 1.849 C23 GG2 31
GG2 O1 O1 O 0 1 N N N N N N 2.461 46.668 64.087 -0.201 13.871 0.365 O1 GG2 32
GG2 N3 N3 N 0 1 N N N N N N 3.440 46.969 66.114 1.567 15.077 -0.457 N3 GG2 33
GG2 C17 C17 C 0 1 N N N N N N 3.961 44.675 62.317 0.072 10.760 0.573 C17 GG2 34
GG2 H2 H2 H 0 1 N N N N N N 11.303 47.282 64.377 6.264 10.279 -4.059 H2 GG2 35
GG2 H3 H3 H 0 1 N N N N N N 8.881 47.384 63.552 4.005 10.857 -3.264 H3 GG2 36
GG2 H14 H14 H 0 1 N N N N N N 8.268 42.186 57.667 -1.098 4.543 0.303 H14 GG2 37
GG2 H151 1H15 H 0 0 N N N N N N 13.078 43.587 66.310 9.884 11.074 -1.455 H151 GG2 38
GG2 H152 2H15 H 0 0 N N N N N N 13.893 44.888 67.240 10.233 9.374 -1.898 H152 GG2 39
GG2 H153 3H15 H 0 0 N N N N N N 12.261 44.320 67.732 9.043 9.742 -0.621 H153 GG2 40
GG2 H201 1H20 H 0 0 N N N N N N 9.552 38.922 59.159 -0.897 2.222 0.466 H201 GG2 41
GG2 H202 2H20 H 0 0 N N N N N N 9.984 39.924 57.674 -1.156 3.154 1.951 H202 GG2 42
GG2 H211 1H21 H 0 0 N N N N N N 10.858 37.740 57.316 -1.561 0.684 2.242 H211 GG2 43
GG2 H212 2H21 H 0 0 N N N N N N 9.341 36.959 57.817 -0.334 1.328 3.338 H212 GG2 44
GG2 H22 H22 H 0 1 N N N N N N 5.566 40.613 61.722 3.143 6.960 1.204 H22 GG2 45
GG2 H241 1H24 H 0 0 N N N N N N 3.910 42.950 61.052 -0.840 8.793 0.674 H241 GG2 46
GG2 H242 2H24 H 0 0 N N N N N N 4.371 42.647 62.804 -0.349 9.283 -0.961 H242 GG2 47
GG2 H5 H5 H 0 1 N N N N N N 7.900 43.842 66.020 5.526 11.243 0.754 H5 GG2 48
GG2 H6 H6 H 0 1 N N N N N N 10.311 43.735 66.832 7.782 10.664 -0.050 H6 GG2 49
GG2 H44 H44 H 0 1 N N N N N N 7.259 43.900 59.267 -0.937 6.950 -0.186 H44 GG2 50
GG2 H18 H18 H 0 1 N N N N N N 6.502 38.903 60.075 2.982 4.553 1.692 H18 GG2 51
GG2 H251 1H25 H 0 0 N N N N N N 9.592 38.932 55.476 0.235 -0.075 0.675 H251 GG2 52
GG2 H252 2H25 H 0 0 N N N N N N 9.590 37.159 55.294 0.421 -0.801 2.275 H252 GG2 53
GG2 H231 1H23 H 0 0 N N N N N N 7.385 37.002 56.341 2.567 0.099 1.362 H231 GG2 54
GG2 H232 2H23 H 0 0 N N N N N N 7.338 38.223 54.982 2.124 0.840 2.905 H232 GG2 55
GG2 HN31 1HN3 H 0 0 N N N N N N 4.333 46.835 66.544 2.514 15.064 -0.821 HN31 GG2 56
GG2 HN32 2HN3 H 0 0 N N N N N N 2.636 47.328 66.588 1.089 15.967 -0.364 HN32 GG2 57
GG2 H171 1H17 H 0 0 N N N N N N 2.965 44.589 62.777 0.124 10.782 1.669 H171 GG2 58
GG2 H172 2H17 H 0 0 N N N N N N 3.861 45.325 61.435 -0.810 11.333 0.269 H172 GG2 59
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
GG2 C1 C2 SING Y N 1
GG2 C1 O4 SING N N 2
GG2 C1 C6 DOUB Y N 3
GG2 C2 C3 DOUB Y N 4
GG2 C2 H2 SING N N 5
GG2 C3 C4 SING Y N 6
GG2 C3 H3 SING N N 7
GG2 O4 C15 SING N N 8
GG2 N6 N1 SING N N 9
GG2 N6 C10 DOUB N N 10
GG2 C7 C44 DOUB Y N 11
GG2 C7 C22 SING Y N 12
GG2 C7 N5 SING N N 13
GG2 C8 N5 SING N N 14
GG2 C8 O3 DOUB N N 15
GG2 C8 C13 SING N N 16
GG2 C10 C12 SING N N 17
GG2 C10 C11 SING N N 18
GG2 C11 O1 DOUB N N 19
GG2 C11 N3 SING N N 20
GG2 C12 C17 SING N N 21
GG2 C12 C13 DOUB N N 22
GG2 C13 N1 SING N N 23
GG2 C14 C16 DOUB Y N 24
GG2 C14 C44 SING Y N 25
GG2 C14 H14 SING N N 26
GG2 C15 H151 SING N N 27
GG2 C15 H152 SING N N 28
GG2 C15 H153 SING N N 29
GG2 C16 N2 SING N N 30
GG2 C16 C18 SING Y N 31
GG2 C19 C23 SING N N 32
GG2 C19 O2 DOUB N N 33
GG2 C19 N2 SING N N 34
GG2 C20 C21 SING N N 35
GG2 C20 N2 SING N N 36
GG2 C20 H201 SING N N 37
GG2 C20 H202 SING N N 38
GG2 C21 C25 SING N N 39
GG2 C21 H211 SING N N 40
GG2 C21 H212 SING N N 41
GG2 C22 C18 DOUB Y N 42
GG2 C22 H22 SING N N 43
GG2 C24 N5 SING N N 44
GG2 C24 C17 SING N N 45
GG2 C24 H241 SING N N 46
GG2 C24 H242 SING N N 47
GG2 C4 N1 SING N N 48
GG2 C4 C5 DOUB Y N 49
GG2 C5 C6 SING Y N 50
GG2 C5 H5 SING N N 51
GG2 C6 H6 SING N N 52
GG2 C44 H44 SING N N 53
GG2 C18 H18 SING N N 54
GG2 C25 C23 SING N N 55
GG2 C25 H251 SING N N 56
GG2 C25 H252 SING N N 57
GG2 C23 H231 SING N N 58
GG2 C23 H232 SING N N 59
GG2 N3 HN31 SING N N 60
GG2 N3 HN32 SING N N 61
GG2 C17 H171 SING N N 62
GG2 C17 H172 SING N N 63
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
GG2 SMILES ACDLabs 10.04 O=C5N(c4ccc(N3C(=O)c1c(c(nn1c2ccc(OC)cc2)C(=O)N)CC3)cc4)CCCC5
GG2 SMILES_CANONICAL CACTVS 3.341 COc1ccc(cc1)n2nc(C(N)=O)c3CCN(C(=O)c23)c4ccc(cc4)N5CCCCC5=O
GG2 SMILES CACTVS 3.341 COc1ccc(cc1)n2nc(C(N)=O)c3CCN(C(=O)c23)c4ccc(cc4)N5CCCCC5=O
GG2 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 COc1ccc(cc1)n2c3c(c(n2)C(=O)N)CCN(C3=O)c4ccc(cc4)N5CCCCC5=O
GG2 SMILES "OpenEye OEToolkits" 1.5.0 COc1ccc(cc1)n2c3c(c(n2)C(=O)N)CCN(C3=O)c4ccc(cc4)N5CCCCC5=O
GG2 InChI InChI 1.03 InChI=1S/C25H25N5O4/c1-34-19-11-9-18(10-12-19)30-23-20(22(27-30)24(26)32)13-15-29(25(23)33)17-7-5-16(6-8-17)28-14-3-2-4-21(28)31/h5-12H,2-4,13-15H2,1H3,(H2,26,32)
GG2 InChIKey InChI 1.03 QNZCBYKSOIHPEH-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
GG2 "SYSTEMATIC NAME" ACDLabs 10.04 1-(4-methoxyphenyl)-7-oxo-6-[4-(2-oxopiperidin-1-yl)phenyl]-4,5,6,7-tetrahydro-1H-pyrazolo[3,4-c]pyridine-3-carboxamide
GG2 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 1-(4-methoxyphenyl)-7-oxo-6-[4-(2-oxopiperidin-1-yl)phenyl]-4,5-dihydropyrazolo[5,4-c]pyridine-3-carboxamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
GG2 'Create component' 2007-03-09 RCSB
GG2 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id GG2
_pdbe_chem_comp_drugbank_details.drugbank_id DB06605
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name Apixaban
_pdbe_chem_comp_drugbank_details.description
'Apixaban is an oral, direct, and highly selective factor Xa (FXa) inhibitor of both free and bound FXa, as well as prothrombinase, independent of antithrombin III for the prevention and treatment of thromboembolic diseases[Label,A6897]. It is marketed under the name Eliquis[Label,L6043]. Apixaban was approved by the FDA on December 28, 2012[L6043].'
_pdbe_chem_comp_drugbank_details.cas_number 503612-47-3
_pdbe_chem_comp_drugbank_details.mechanism_of_action
'Apixaban selectively inhibits factor Xa in its free and bound forms, independant of antithrombin III[Label]. Apixaban also inhibits prothrominase[Label]. These effects prevent the formation of a thrombus[Label].'
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
GG2 Apixaban DrugBank ?
GG2 apixabanum DrugBank ?
#
_pdbe_chem_comp_drugbank_classification.comp_id GG2
_pdbe_chem_comp_drugbank_classification.drugbank_id DB06605
_pdbe_chem_comp_drugbank_classification.parent Phenylpiperidines
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class Piperidines
_pdbe_chem_comp_drugbank_classification.superclass 'Organoheterocyclic compounds'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as phenylpiperidines. These are compounds containing a phenylpiperidine skeleton, which consists of a piperidine bound to a phenyl group.'
#
_pdbe_chem_comp_drugbank_targets.comp_id GG2
_pdbe_chem_comp_drugbank_targets.drugbank_id DB06605
_pdbe_chem_comp_drugbank_targets.name 'Coagulation factor X'
_pdbe_chem_comp_drugbank_targets.organism Humans
_pdbe_chem_comp_drugbank_targets.uniprot_id P00742
_pdbe_chem_comp_drugbank_targets.pharmacologically_active yes
_pdbe_chem_comp_drugbank_targets.ordinal 1
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
GG2 C1 C 16.210 -3.788 1
GG2 C2 C 14.742 -3.478 2
GG2 C3 C 14.276 -2.053 3
GG2 O4 O 16.676 -5.213 4
GG2 N6 N 15.687 1.697 5
GG2 C7 C 9.495 0.197 6
GG2 C8 C 12.093 0.197 7
GG2 C10 C 14.812 2.904 8
GG2 C11 C 15.278 4.330 9
GG2 C12 C 13.392 2.447 10
GG2 C13 C 13.392 0.947 11
GG2 C14 C 6.897 0.197 12
GG2 C15 C 18.143 -5.523 13
GG2 C16 C 6.897 -1.303 14
GG2 C19 C 4.299 -1.303 15
GG2 C20 C 5.598 -3.553 16
GG2 C21 C 4.299 -4.303 17
GG2 C22 C 9.495 -1.303 18
GG2 C24 C 10.794 2.447 19
GG2 C4 C 15.278 -0.936 20
GG2 C5 C 16.745 -1.246 21
GG2 C6 C 17.211 -2.671 22
GG2 N1 N 14.812 0.490 23
GG2 N5 N 10.794 0.947 24
GG2 C44 C 8.196 0.947 25
GG2 N2 N 5.598 -2.053 26
GG2 C18 C 8.196 -2.053 27
GG2 O3 O 12.093 -1.303 28
GG2 C25 C 3.000 -3.553 29
GG2 O2 O 4.299 0.197 30
GG2 C23 C 3.000 -2.053 31
GG2 O1 O 14.276 5.446 32
GG2 N3 N 16.745 4.639 33
GG2 C17 C 12.093 3.197 34
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
GG2 C1 C2 DOUBLE NONE 1
GG2 C1 O4 SINGLE NONE 2
GG2 C1 C6 SINGLE NONE 3
GG2 C2 C3 SINGLE NONE 4
GG2 C3 C4 DOUBLE NONE 5
GG2 O4 C15 SINGLE NONE 6
GG2 N6 N1 SINGLE NONE 7
GG2 N6 C10 DOUBLE NONE 8
GG2 C7 C44 DOUBLE NONE 9
GG2 C7 C22 SINGLE NONE 10
GG2 C7 N5 SINGLE NONE 11
GG2 C8 N5 SINGLE NONE 12
GG2 C8 O3 DOUBLE NONE 13
GG2 C8 C13 SINGLE NONE 14
GG2 C10 C12 SINGLE NONE 15
GG2 C10 C11 SINGLE NONE 16
GG2 C11 O1 DOUBLE NONE 17
GG2 C11 N3 SINGLE NONE 18
GG2 C12 C17 SINGLE NONE 19
GG2 C12 C13 DOUBLE NONE 20
GG2 C13 N1 SINGLE NONE 21
GG2 C14 C16 DOUBLE NONE 22
GG2 C14 C44 SINGLE NONE 23
GG2 C16 N2 SINGLE NONE 24
GG2 C16 C18 SINGLE NONE 25
GG2 C19 C23 SINGLE NONE 26
GG2 C19 O2 DOUBLE NONE 27
GG2 C19 N2 SINGLE NONE 28
GG2 C20 C21 SINGLE NONE 29
GG2 C20 N2 SINGLE NONE 30
GG2 C21 C25 SINGLE NONE 31
GG2 C22 C18 DOUBLE NONE 32
GG2 C24 N5 SINGLE NONE 33
GG2 C24 C17 SINGLE NONE 34
GG2 C4 N1 SINGLE NONE 35
GG2 C4 C5 SINGLE NONE 36
GG2 C5 C6 DOUBLE NONE 37
GG2 C25 C23 SINGLE NONE 38
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
GG2 MurckoScaffold S1 scaffold O=C1CCCCN1c1ccc(N2CCc3cnn(-c4ccccc4)c3C2=O)cc1 InChI=1S/C23H22N4O2/c28-21-8-4-5-14-25(21)18-9-11-19(12-10-18)26-15-13-17-16-24-27(22(17)23(26)29)20-6-2-1-3-7-20/h1-3,6-7,9-12,16H,4-5,8,13-15H2 JVRIGPFZPVZZAU-UHFFFAOYSA-N
GG2 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
GG2 phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
GG2 pyrazole F3 fragment 'c1cn[nH]c1' InChI=1S/C3H4N2/c1-2-4-5-3-1/h1-3H,(H,4,5) WTKZEGDFNFYCGP-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
GG2 C1 S1 1
GG2 C2 S1 1
GG2 C3 S1 1
GG2 N6 S1 1
GG2 C7 S1 1
GG2 C8 S1 1
GG2 C10 S1 1
GG2 C12 S1 1
GG2 C13 S1 1
GG2 C14 S1 1
GG2 C16 S1 1
GG2 C19 S1 1
GG2 C20 S1 1
GG2 C21 S1 1
GG2 C22 S1 1
GG2 C24 S1 1
GG2 C4 S1 1
GG2 C5 S1 1
GG2 C6 S1 1
GG2 N1 S1 1
GG2 N5 S1 1
GG2 C44 S1 1
GG2 N2 S1 1
GG2 C18 S1 1
GG2 O3 S1 1
GG2 C25 S1 1
GG2 O2 S1 1
GG2 C23 S1 1
GG2 C17 S1 1
GG2 N5 F1 1
GG2 C8 F1 1
GG2 O3 F1 1
GG2 C13 F1 1
GG2 N2 F1 2
GG2 C19 F1 2
GG2 O2 F1 2
GG2 C23 F1 2
GG2 N3 F1 3
GG2 C11 F1 3
GG2 O1 F1 3
GG2 C10 F1 3
GG2 C1 F2 1
GG2 C2 F2 1
GG2 C3 F2 1
GG2 C4 F2 1
GG2 C5 F2 1
GG2 C6 F2 1
GG2 C7 F2 2
GG2 C44 F2 2
GG2 C14 F2 2
GG2 C16 F2 2
GG2 C18 F2 2
GG2 C22 F2 2
GG2 C10 F3 1
GG2 C12 F3 1
GG2 C13 F3 1
GG2 N1 F3 1
GG2 N6 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id GG2
_pdbe_chem_comp_rdkit_properties.exactmw 459.191
_pdbe_chem_comp_rdkit_properties.amw 459.506
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 6
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 6
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 34
_pdbe_chem_comp_rdkit_properties.NumAtoms 59
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 9
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 3
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.280
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 231.489
_pdbe_chem_comp_rdkit_properties.tpsa 110.760
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.122
_pdbe_chem_comp_rdkit_properties.CrippenMR 122.943
_pdbe_chem_comp_rdkit_properties.chi0v 16.369
_pdbe_chem_comp_rdkit_properties.chi1v 8.957
_pdbe_chem_comp_rdkit_properties.chi2v 4.338
_pdbe_chem_comp_rdkit_properties.chi3v 4.338
_pdbe_chem_comp_rdkit_properties.chi4v 2.878
_pdbe_chem_comp_rdkit_properties.chi0n 41.369
_pdbe_chem_comp_rdkit_properties.chi1n 21.351
_pdbe_chem_comp_rdkit_properties.chi2n 4.338
_pdbe_chem_comp_rdkit_properties.chi3n 4.338
_pdbe_chem_comp_rdkit_properties.chi4n 2.878
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4.140
_pdbe_chem_comp_rdkit_properties.kappa1 7.179
_pdbe_chem_comp_rdkit_properties.kappa2 8.660
_pdbe_chem_comp_rdkit_properties.kappa3 3.684
_pdbe_chem_comp_rdkit_properties.Phi 1.828
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
GG2 UniChem DrugBank DB06605
GG2 UniChem 'Guide to Pharmacology' 6390
GG2 UniChem 'PubChem DOTF' 56310620
GG2 UniChem ChEBI 72296
GG2 UniChem ZINC ZINC000011677837
GG2 UniChem fdasrs 3Z9Y7UWC1J
GG2 UniChem PharmGKB PA166163740
GG2 UniChem HMDB HMDB0248515
GG2 UniChem Selleck Apixaban(BMS-562247-01)
GG2 UniChem 'PubChem TPHARMA' 15178464
GG2 UniChem LINCS LSM-45660
GG2 UniChem ACTor 503612-47-3
GG2 UniChem Nikkaji J2.566.952E
GG2 UniChem BindingDb 19023
GG2 UniChem 'EPA CompTox Dashboard' DTXSID80436500
GG2 UniChem DrugCentral 4298
GG2 UniChem BRENDA 3564
GG2 UniChem BRENDA 85842
GG2 UniChem ChemicalBook CB51508586
GG2 UniChem DailyMed APIXABAN
GG2 UniChem ClinicalTrials APIXABAN
GG2 UniChem ClinicalTrials BMS-562247
GG2 UniChem ClinicalTrials BMS-562247-01
GG2 UniChem ClinicalTrials ELIQUIS
GG2 UniChem rxnorm APIXABAN
GG2 UniChem rxnorm ELIQUIS
GG2 UniChem MedChemExpress HY-50667
GG2 UniChem 'Probes And Drugs' PD009294
GG2 UniChem CCDC NUPQEW
GG2 UniChem eMolecules 32278100
GG2 UniChem SureChEMBL SCHEMBL118023
GG2 UniChem PubChem 10182969
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
GG2 C1 -5.415 2.678 0.554 ETKDGv3 1
GG2 C2 -4.436 2.205 1.337 ETKDGv3 2
GG2 C3 -3.845 0.875 1.081 ETKDGv3 3
GG2 O4 -5.947 3.944 0.832 ETKDGv3 4
GG2 N6 -4.536 -2.298 -0.434 ETKDGv3 5
GG2 C7 1.341 -0.952 0.290 ETKDGv3 6
GG2 C8 -1.158 -0.889 0.100 ETKDGv3 7
GG2 C10 -3.788 -3.357 -0.384 ETKDGv3 8
GG2 C11 -4.330 -4.713 -0.586 ETKDGv3 9
GG2 C12 -2.401 -2.970 -0.071 ETKDGv3 10
GG2 C13 -2.407 -1.654 0.006 ETKDGv3 11
GG2 C14 3.540 -0.430 1.237 ETKDGv3 12
GG2 C15 -6.987 4.552 0.075 ETKDGv3 13
GG2 C16 3.857 0.367 0.202 ETKDGv3 14
GG2 C19 6.354 0.346 0.424 ETKDGv3 15
GG2 C20 5.176 2.442 -0.324 ETKDGv3 16
GG2 C21 6.342 3.216 0.298 ETKDGv3 17
GG2 C22 1.689 -0.073 -0.854 ETKDGv3 18
GG2 C24 -0.024 -3.037 0.737 ETKDGv3 19
GG2 C4 -4.269 0.132 0.044 ETKDGv3 20
GG2 C5 -5.365 0.641 -0.811 ETKDGv3 21
GG2 C6 -5.905 1.844 -0.577 ETKDGv3 22
GG2 N1 -3.733 -1.175 -0.201 ETKDGv3 23
GG2 N5 0.065 -1.621 0.325 ETKDGv3 24
GG2 C44 2.235 -1.121 1.280 ETKDGv3 25
GG2 N2 5.124 1.058 0.170 ETKDGv3 26
GG2 C18 2.872 0.550 -0.895 ETKDGv3 27
GG2 O3 -1.151 0.363 -0.044 ETKDGv3 28
GG2 C25 7.655 2.458 0.090 ETKDGv3 29
GG2 O2 6.376 -0.915 0.408 ETKDGv3 30
GG2 C23 7.607 1.093 0.778 ETKDGv3 31
GG2 O1 -5.560 -4.915 -0.406 ETKDGv3 32
GG2 N3 -3.502 -5.795 -1.012 ETKDGv3 33
GG2 C17 -1.139 -3.787 -0.025 ETKDGv3 34
GG2 H2 -4.072 2.795 2.168 ETKDGv3 35
GG2 H3 -3.087 0.501 1.757 ETKDGv3 36
GG2 H14 4.228 -0.562 2.063 ETKDGv3 37
GG2 H151 -7.215 5.549 0.506 ETKDGv3 38
GG2 H152 -7.904 3.928 0.116 ETKDGv3 39
GG2 H153 -6.664 4.686 -0.979 ETKDGv3 40
GG2 H201 4.231 2.973 -0.076 ETKDGv3 41
GG2 H202 5.288 2.431 -1.430 ETKDGv3 42
GG2 H211 6.414 4.217 -0.179 ETKDGv3 43
GG2 H212 6.158 3.362 1.385 ETKDGv3 44
GG2 H22 0.991 0.054 -1.671 ETKDGv3 45
GG2 H241 0.941 -3.557 0.550 ETKDGv3 46
GG2 H242 -0.234 -3.081 1.828 ETKDGv3 47
GG2 H5 -5.728 0.041 -1.636 ETKDGv3 48
GG2 H6 -6.701 2.196 -1.220 ETKDGv3 49
GG2 H44 2.004 -1.749 2.132 ETKDGv3 50
GG2 H18 3.113 1.176 -1.744 ETKDGv3 51
GG2 H251 7.843 2.325 -0.998 ETKDGv3 52
GG2 H252 8.494 3.052 0.513 ETKDGv3 53
GG2 H231 7.638 1.231 1.880 ETKDGv3 54
GG2 H232 8.499 0.502 0.476 ETKDGv3 55
GG2 HN31 -2.545 -5.633 -1.390 ETKDGv3 56
GG2 HN32 -3.896 -6.761 -1.068 ETKDGv3 57
GG2 H171 -1.335 -4.756 0.481 ETKDGv3 58
GG2 H172 -0.800 -3.980 -1.065 ETKDGv3 59
#