data_GC8
#
_chem_comp.id GC8
_chem_comp.name 2-(2,4-dichlorophenoxy)-N-[4-(1-piperidinylmethyl)phenyl]acetamide
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C20 H22 Cl2 N2 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2013-06-26
_chem_comp.pdbx_modified_date 2016-02-26
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 393.307
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code GC8
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4BVI
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
GC8 CL1 CL1 CL 0 0 N N N N N N 14.334 -14.611 -37.652 -8.565 -0.823 0.601 CL1 GC8 1
GC8 C02 C02 C 0 1 Y N N N N N 13.681 -13.038 -37.487 -6.870 -0.515 0.385 C02 GC8 2
GC8 C03 C03 C 0 1 Y N N N N N 14.479 -12.032 -36.947 -5.960 -1.551 0.497 C03 GC8 3
GC8 C04 C04 C 0 1 Y N N N N N 13.971 -10.755 -36.801 -4.611 -1.308 0.326 C04 GC8 4
GC8 C05 C05 C 0 1 Y N N N N N 12.663 -10.404 -37.173 -4.168 -0.025 0.041 C05 GC8 5
GC8 O06 O06 O 0 1 N N N N N N 12.198 -9.114 -37.027 -2.841 0.216 -0.128 O06 GC8 6
GC8 C07 C07 C 0 1 N N N N N N 11.911 -8.644 -35.730 -1.958 -0.900 0.001 C07 GC8 7
GC8 C08 C08 C 0 1 N N N N N N 10.879 -7.453 -35.684 -0.538 -0.445 -0.217 C08 GC8 8
GC8 O09 O09 O 0 1 N N N N N N 11.152 -6.352 -35.285 -0.305 0.720 -0.460 O09 GC8 9
GC8 N10 N10 N 0 1 N N N N N N 9.531 -7.723 -36.166 0.473 -1.333 -0.143 N10 GC8 10
GC8 C11 C11 C 0 1 Y N N N N N 8.408 -6.827 -36.261 1.780 -0.932 -0.440 C11 GC8 11
GC8 C12 C12 C 0 1 Y N N N N N 8.214 -5.679 -35.459 2.208 0.348 -0.109 C12 GC8 12
GC8 C13 C13 C 0 1 Y N N N N N 7.098 -4.867 -35.646 3.498 0.741 -0.404 C13 GC8 13
GC8 C14 C14 C 0 1 Y N N N N N 6.119 -5.144 -36.614 4.365 -0.137 -1.029 C14 GC8 14
GC8 C15 C15 C 0 1 Y N N N N N 6.305 -6.264 -37.423 3.942 -1.411 -1.361 C15 GC8 15
GC8 C16 C16 C 0 1 Y N N N N N 7.420 -7.087 -37.248 2.654 -1.813 -1.063 C16 GC8 16
GC8 C17 C17 C 0 1 N N N N N N 5.034 -4.165 -36.664 5.772 0.295 -1.350 C17 GC8 17
GC8 N18 N18 N 0 1 N N N N N N 5.373 -2.727 -37.190 6.653 -0.026 -0.218 N18 GC8 18
GC8 C19 C19 C 0 1 N N N N N N 5.392 -2.897 -38.722 8.063 0.161 -0.580 C19 GC8 19
GC8 C20 C20 C 0 1 N N N N N N 5.480 -1.626 -39.525 8.954 -0.319 0.568 C20 GC8 20
GC8 C21 C21 C 0 1 N N N N N N 4.469 -0.567 -39.023 8.622 0.478 1.832 C21 GC8 21
GC8 C22 C22 C 0 1 N N N N N N 4.496 -0.397 -37.484 7.136 0.306 2.160 C22 GC8 22
GC8 C23 C23 C 0 1 N N N N N N 4.358 -1.709 -36.725 6.299 0.768 0.965 C23 GC8 23
GC8 C24 C24 C 0 1 Y N N N N N 11.899 -11.456 -37.718 -5.083 1.013 -0.071 C24 GC8 24
GC8 CL2 CL2 CL 0 0 N N N N N N 10.279 -11.182 -38.224 -4.532 2.621 -0.427 CL2 GC8 25
GC8 C26 C26 C 0 1 Y N N N N N 12.364 -12.764 -37.885 -6.432 0.765 0.096 C26 GC8 26
GC8 H03 H03 H 0 1 N N N N N N 15.492 -12.249 -36.643 -6.305 -2.550 0.718 H03 GC8 27
GC8 H26 H26 H 0 1 N N N N N N 11.733 -13.534 -38.304 -7.145 1.572 0.005 H26 GC8 28
GC8 H04 H04 H 0 1 N N N N N N 14.609 -9.992 -36.381 -3.901 -2.117 0.414 H04 GC8 29
GC8 H071 H071 H 0 0 N N N N N N 11.499 -9.479 -35.144 -2.053 -1.326 1.000 H071 GC8 30
GC8 H072 H072 H 0 0 N N N N N N 12.851 -8.303 -35.272 -2.216 -1.656 -0.741 H072 GC8 31
GC8 H10 H10 H 0 1 N N N N N N 9.362 -8.660 -36.473 0.295 -2.250 0.117 H10 GC8 32
GC8 H12 H12 H 0 1 N N N N N N 8.936 -5.430 -34.696 1.531 1.034 0.379 H12 GC8 33
GC8 H16 H16 H 0 1 N N N N N N 7.535 -7.951 -37.885 2.326 -2.810 -1.318 H16 GC8 34
GC8 H13 H13 H 0 1 N N N N N N 6.981 -3.992 -35.024 3.831 1.736 -0.147 H13 GC8 35
GC8 H15 H15 H 0 1 N N N N N N 5.582 -6.497 -38.191 4.621 -2.095 -1.849 H15 GC8 36
GC8 H171 H171 H 0 0 N N N N N N 4.250 -4.577 -37.316 6.119 -0.228 -2.240 H171 GC8 37
GC8 H172 H172 H 0 0 N N N N N N 4.642 -4.057 -35.642 5.790 1.370 -1.530 H172 GC8 38
GC8 H191 H191 H 0 0 N N N N N N 6.261 -3.520 -38.981 8.287 -0.415 -1.479 H191 GC8 39
GC8 H192 H192 H 0 0 N N N N N N 4.468 -3.417 -39.015 8.253 1.217 -0.770 H192 GC8 40
GC8 H231 H231 H 0 0 N N N N N N 3.347 -2.112 -36.888 6.497 1.822 0.769 H231 GC8 41
GC8 H232 H232 H 0 0 N N N N N N 4.508 -1.519 -35.652 5.241 0.633 1.190 H232 GC8 42
GC8 H201 H201 H 0 0 N N N N N N 6.498 -1.218 -39.438 8.774 -1.379 0.749 H201 GC8 43
GC8 H202 H202 H 0 0 N N N N N N 5.265 -1.854 -40.579 10.000 -0.166 0.305 H202 GC8 44
GC8 H211 H211 H 0 0 N N N N N N 4.712 0.400 -39.488 9.223 0.110 2.664 H211 GC8 45
GC8 H212 H212 H 0 0 N N N N N N 3.457 -0.875 -39.325 8.838 1.533 1.665 H212 GC8 46
GC8 H221 H221 H 0 0 N N N N N N 5.452 0.069 -37.202 6.929 -0.744 2.366 H221 GC8 47
GC8 H222 H222 H 0 0 N N N N N N 3.666 0.263 -37.192 6.885 0.905 3.035 H222 GC8 48
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
GC8 CL1 C02 SING N N 1
GC8 C02 C03 SING Y N 2
GC8 C02 C26 DOUB Y N 3
GC8 C03 C04 DOUB Y N 4
GC8 C04 C05 SING Y N 5
GC8 C05 O06 SING N N 6
GC8 C05 C24 DOUB Y N 7
GC8 O06 C07 SING N N 8
GC8 C07 C08 SING N N 9
GC8 C08 O09 DOUB N N 10
GC8 C08 N10 SING N N 11
GC8 N10 C11 SING N N 12
GC8 C11 C12 SING Y N 13
GC8 C11 C16 DOUB Y N 14
GC8 C12 C13 DOUB Y N 15
GC8 C13 C14 SING Y N 16
GC8 C14 C15 DOUB Y N 17
GC8 C14 C17 SING N N 18
GC8 C15 C16 SING Y N 19
GC8 C17 N18 SING N N 20
GC8 N18 C19 SING N N 21
GC8 N18 C23 SING N N 22
GC8 C19 C20 SING N N 23
GC8 C20 C21 SING N N 24
GC8 C21 C22 SING N N 25
GC8 C22 C23 SING N N 26
GC8 C24 CL2 SING N N 27
GC8 C24 C26 SING Y N 28
GC8 C03 H03 SING N N 29
GC8 C26 H26 SING N N 30
GC8 C04 H04 SING N N 31
GC8 C07 H071 SING N N 32
GC8 C07 H072 SING N N 33
GC8 N10 H10 SING N N 34
GC8 C12 H12 SING N N 35
GC8 C16 H16 SING N N 36
GC8 C13 H13 SING N N 37
GC8 C15 H15 SING N N 38
GC8 C17 H171 SING N N 39
GC8 C17 H172 SING N N 40
GC8 C19 H191 SING N N 41
GC8 C19 H192 SING N N 42
GC8 C23 H231 SING N N 43
GC8 C23 H232 SING N N 44
GC8 C20 H201 SING N N 45
GC8 C20 H202 SING N N 46
GC8 C21 H211 SING N N 47
GC8 C21 H212 SING N N 48
GC8 C22 H221 SING N N 49
GC8 C22 H222 SING N N 50
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
GC8 SMILES ACDLabs 12.01 Clc3ccc(OCC(=O)Nc1ccc(cc1)CN2CCCCC2)c(Cl)c3
GC8 InChI InChI 1.03 InChI=1S/C20H22Cl2N2O2/c21-16-6-9-19(18(22)12-16)26-14-20(25)23-17-7-4-15(5-8-17)13-24-10-2-1-3-11-24/h4-9,12H,1-3,10-11,13-14H2,(H,23,25)
GC8 InChIKey InChI 1.03 KHNVQJDWUHRVDK-UHFFFAOYSA-N
GC8 SMILES_CANONICAL CACTVS 3.385 Clc1ccc(OCC(=O)Nc2ccc(CN3CCCCC3)cc2)c(Cl)c1
GC8 SMILES CACTVS 3.385 Clc1ccc(OCC(=O)Nc2ccc(CN3CCCCC3)cc2)c(Cl)c1
GC8 SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 c1cc(ccc1CN2CCCCC2)NC(=O)COc3ccc(cc3Cl)Cl
GC8 SMILES "OpenEye OEToolkits" 1.9.2 c1cc(ccc1CN2CCCCC2)NC(=O)COc3ccc(cc3Cl)Cl
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
GC8 "SYSTEMATIC NAME" ACDLabs 12.01 2-(2,4-dichlorophenoxy)-N-[4-(piperidin-1-ylmethyl)phenyl]acetamide
GC8 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 2-[2,4-bis(chloranyl)phenoxy]-N-[4-(piperidin-1-ylmethyl)phenyl]ethanamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
GC8 'Create component' 2013-06-26 EBI
GC8 'Modify name' 2013-07-02 EBI
GC8 'Modify descriptor' 2014-09-05 RCSB
GC8 'Initial release' 2016-03-02 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
GC8 CL1 Cl 9.495 9.000 1
GC8 C02 C 9.495 7.500 2
GC8 C03 C 8.196 6.750 3
GC8 C04 C 8.196 5.250 4
GC8 C05 C 9.495 4.500 5
GC8 O06 O 9.495 3.000 6
GC8 C07 C 8.196 2.250 7
GC8 C08 C 8.196 0.750 8
GC8 O09 O 9.495 0.000 9
GC8 N10 N 6.897 0.000 10
GC8 C11 C 6.897 -1.500 11
GC8 C12 C 8.196 -2.250 12
GC8 C13 C 8.196 -3.750 13
GC8 C14 C 6.897 -4.500 14
GC8 C15 C 5.598 -3.750 15
GC8 C16 C 5.598 -2.250 16
GC8 C17 C 6.897 -6.000 17
GC8 N18 N 5.598 -6.750 18
GC8 C19 C 4.299 -6.000 19
GC8 C20 C 3.000 -6.750 20
GC8 C21 C 3.000 -8.250 21
GC8 C22 C 4.299 -9.000 22
GC8 C23 C 5.598 -8.250 23
GC8 C24 C 10.794 5.250 24
GC8 CL2 Cl 12.093 4.500 25
GC8 C26 C 10.794 6.750 26
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
GC8 CL1 C02 SINGLE NONE 1
GC8 C02 C03 DOUBLE NONE 2
GC8 C02 C26 SINGLE NONE 3
GC8 C03 C04 SINGLE NONE 4
GC8 C04 C05 DOUBLE NONE 5
GC8 C05 O06 SINGLE NONE 6
GC8 C05 C24 SINGLE NONE 7
GC8 O06 C07 SINGLE NONE 8
GC8 C07 C08 SINGLE NONE 9
GC8 C08 O09 DOUBLE NONE 10
GC8 C08 N10 SINGLE NONE 11
GC8 N10 C11 SINGLE NONE 12
GC8 C11 C12 DOUBLE NONE 13
GC8 C11 C16 SINGLE NONE 14
GC8 C12 C13 SINGLE NONE 15
GC8 C13 C14 DOUBLE NONE 16
GC8 C14 C15 SINGLE NONE 17
GC8 C14 C17 SINGLE NONE 18
GC8 C15 C16 DOUBLE NONE 19
GC8 C17 N18 SINGLE NONE 20
GC8 N18 C19 SINGLE NONE 21
GC8 N18 C23 SINGLE NONE 22
GC8 C19 C20 SINGLE NONE 23
GC8 C20 C21 SINGLE NONE 24
GC8 C21 C22 SINGLE NONE 25
GC8 C22 C23 SINGLE NONE 26
GC8 C24 CL2 SINGLE NONE 27
GC8 C24 C26 DOUBLE NONE 28
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
GC8 MurckoScaffold S1 scaffold O=C(COc1ccccc1)Nc1ccc(CN2CCCCC2)cc1 InChI=1S/C20H24N2O2/c23-20(16-24-19-7-3-1-4-8-19)21-18-11-9-17(10-12-18)15-22-13-5-2-6-14-22/h1,3-4,7-12H,2,5-6,13-16H2,(H,21,23) NPEHZTLUXMYGJZ-UHFFFAOYSA-N
GC8 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
GC8 phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
GC8 Z31504642 F3 fragment COCC(=O)Nc1ccccc1 InChI=1S/C9H11NO2/c1-12-7-9(11)10-8-5-3-2-4-6-8/h2-6H,7H2,1H3,(H,10,11) LEQAQBFYCMENLP-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
GC8 C02 S1 1
GC8 C03 S1 1
GC8 C04 S1 1
GC8 C05 S1 1
GC8 O06 S1 1
GC8 C07 S1 1
GC8 C08 S1 1
GC8 O09 S1 1
GC8 N10 S1 1
GC8 C11 S1 1
GC8 C12 S1 1
GC8 C13 S1 1
GC8 C14 S1 1
GC8 C15 S1 1
GC8 C16 S1 1
GC8 C17 S1 1
GC8 N18 S1 1
GC8 C19 S1 1
GC8 C20 S1 1
GC8 C21 S1 1
GC8 C22 S1 1
GC8 C23 S1 1
GC8 C24 S1 1
GC8 C26 S1 1
GC8 N10 F1 1
GC8 C08 F1 1
GC8 O09 F1 1
GC8 C07 F1 1
GC8 C02 F2 1
GC8 C03 F2 1
GC8 C04 F2 1
GC8 C05 F2 1
GC8 C24 F2 1
GC8 C26 F2 1
GC8 C11 F2 2
GC8 C12 F2 2
GC8 C13 F2 2
GC8 C14 F2 2
GC8 C15 F2 2
GC8 C16 F2 2
GC8 C05 F3 1
GC8 O06 F3 1
GC8 C07 F3 1
GC8 C08 F3 1
GC8 O09 F3 1
GC8 N10 F3 1
GC8 C11 F3 1
GC8 C12 F3 1
GC8 C13 F3 1
GC8 C14 F3 1
GC8 C15 F3 1
GC8 C16 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id GC8
_pdbe_chem_comp_rdkit_properties.exactmw 392.106
_pdbe_chem_comp_rdkit_properties.amw 393.314
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 4
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 6
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 26
_pdbe_chem_comp_rdkit_properties.NumAtoms 48
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 6
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.350
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 194.561
_pdbe_chem_comp_rdkit_properties.tpsa 41.570
_pdbe_chem_comp_rdkit_properties.CrippenClogP 4.099
_pdbe_chem_comp_rdkit_properties.CrippenMR 104.457
_pdbe_chem_comp_rdkit_properties.chi0v 13.979
_pdbe_chem_comp_rdkit_properties.chi1v 7.364
_pdbe_chem_comp_rdkit_properties.chi2v 2.909
_pdbe_chem_comp_rdkit_properties.chi3v 2.909
_pdbe_chem_comp_rdkit_properties.chi4v 1.823
_pdbe_chem_comp_rdkit_properties.chi0n 34.467
_pdbe_chem_comp_rdkit_properties.chi1n 17.556
_pdbe_chem_comp_rdkit_properties.chi2n 2.454
_pdbe_chem_comp_rdkit_properties.chi3n 2.454
_pdbe_chem_comp_rdkit_properties.chi4n 1.453
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.750
_pdbe_chem_comp_rdkit_properties.kappa1 5.631
_pdbe_chem_comp_rdkit_properties.kappa2 9.263
_pdbe_chem_comp_rdkit_properties.kappa3 5.629
_pdbe_chem_comp_rdkit_properties.Phi 2.006
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
GC8 UniChem ZINC ZINC000004991007
GC8 UniChem eMolecules 1747793
GC8 UniChem BindingDb 55727
GC8 UniChem PubChem 1395053
GC8 UniChem Mcule MCULE-2462588333
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
GC8 CL1 6.068 -4.162 0.209 ETKDGv3 1
GC8 C02 5.790 -2.431 0.263 ETKDGv3 2
GC8 C03 5.120 -1.886 1.286 ETKDGv3 3
GC8 C04 4.887 -0.428 1.328 ETKDGv3 4
GC8 C05 5.342 0.364 0.335 ETKDGv3 5
GC8 O06 5.138 1.756 0.321 ETKDGv3 6
GC8 C07 4.345 2.489 1.257 ETKDGv3 7
GC8 C08 2.897 2.128 1.120 ETKDGv3 8
GC8 O09 2.194 1.986 2.157 ETKDGv3 9
GC8 N10 2.307 2.011 -0.182 ETKDGv3 10
GC8 C11 1.092 1.289 -0.442 ETKDGv3 11
GC8 C12 0.321 1.637 -1.486 ETKDGv3 12
GC8 C13 -0.923 0.897 -1.780 ETKDGv3 13
GC8 C14 -1.282 -0.154 -1.024 ETKDGv3 14
GC8 C15 -0.421 -0.560 0.113 ETKDGv3 15
GC8 C16 0.701 0.117 0.385 ETKDGv3 16
GC8 C17 -2.567 -0.892 -1.301 ETKDGv3 17
GC8 N18 -3.741 -0.071 -0.934 ETKDGv3 18
GC8 C19 -3.773 0.204 0.528 ETKDGv3 19
GC8 C20 -5.178 0.578 1.013 ETKDGv3 20
GC8 C21 -6.165 -0.579 0.783 ETKDGv3 21
GC8 C22 -5.772 -1.462 -0.414 ETKDGv3 22
GC8 C23 -5.001 -0.655 -1.467 ETKDGv3 23
GC8 C24 6.088 -0.248 -0.792 ETKDGv3 24
GC8 CL2 6.693 0.760 -2.097 ETKDGv3 25
GC8 C26 6.298 -1.571 -0.825 ETKDGv3 26
GC8 H03 4.745 -2.509 2.088 ETKDGv3 27
GC8 H26 6.840 -2.017 -1.650 ETKDGv3 28
GC8 H04 4.346 -0.024 2.171 ETKDGv3 29
GC8 H071 4.459 3.573 1.045 ETKDGv3 30
GC8 H072 4.709 2.306 2.291 ETKDGv3 31
GC8 H10 2.783 2.492 -0.979 ETKDGv3 32
GC8 H12 0.595 2.475 -2.114 ETKDGv3 33
GC8 H16 1.333 -0.217 1.198 ETKDGv3 34
GC8 H13 -1.542 1.217 -2.609 ETKDGv3 35
GC8 H15 -0.692 -1.412 0.722 ETKDGv3 36
GC8 H171 -2.587 -1.866 -0.762 ETKDGv3 37
GC8 H172 -2.585 -1.125 -2.389 ETKDGv3 38
GC8 H191 -3.089 1.051 0.752 ETKDGv3 39
GC8 H192 -3.423 -0.678 1.113 ETKDGv3 40
GC8 H231 -5.649 0.174 -1.825 ETKDGv3 41
GC8 H232 -4.820 -1.302 -2.354 ETKDGv3 42
GC8 H201 -5.147 0.835 2.094 ETKDGv3 43
GC8 H202 -5.521 1.479 0.458 ETKDGv3 44
GC8 H211 -6.214 -1.213 1.695 ETKDGv3 45
GC8 H212 -7.180 -0.156 0.616 ETKDGv3 46
GC8 H221 -5.133 -2.302 -0.065 ETKDGv3 47
GC8 H222 -6.687 -1.899 -0.870 ETKDGv3 48
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