data_FUD
#
_chem_comp.id FUD
_chem_comp.name D-fructose
_chem_comp.type D-saccharide
_chem_comp.pdbx_type ATOMS
_chem_comp.formula "C6 H12 O6"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2007-08-15
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag ?
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 180.156
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code FUD
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code ?
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
FUD C1 C1 C 0 1 N N N N N N 10.493 -28.979 -28.327 2.632 0.998 -0.634 C1 FUD 1
FUD C2 C2 C 0 1 N N N N N N 10.484 -29.854 -29.567 1.966 -0.241 -0.092 C2 FUD 2
FUD C3 C3 C 0 1 N N S N N N 10.514 -31.388 -29.411 0.571 -0.600 -0.533 C3 FUD 3
FUD C4 C4 C 0 1 N N R N N N 10.006 -31.930 -28.048 -0.436 0.324 0.155 C4 FUD 4
FUD C5 C5 C 0 1 N N R N N N 10.778 -33.177 -27.586 -1.858 -0.119 -0.195 C5 FUD 5
FUD C6 C6 C 0 1 N N N N N N 9.968 -33.900 -26.517 -2.864 0.805 0.493 C6 FUD 6
FUD O1 O1 O 0 1 N N N N N N 9.823 -27.756 -28.603 3.939 1.121 -0.070 O1 FUD 7
FUD O2 O2 O 0 1 N N N N N N 10.746 -29.367 -30.667 2.551 -0.945 0.695 O2 FUD 8
FUD O3 O3 O 0 1 N N N N N N 11.792 -31.901 -29.732 0.293 -1.956 -0.177 O3 FUD 9
FUD O4 O4 O 0 1 N N N N N N 10.040 -30.948 -27.025 -0.251 0.260 1.571 O4 FUD 10
FUD O5 O5 O 0 1 N N N N N N 11.011 -34.054 -28.680 -2.042 -0.055 -1.610 O5 FUD 11
FUD O6 O6 O 0 1 N N N N N N 10.780 -34.841 -25.846 -4.189 0.323 0.263 O6 FUD 12
FUD H11 1H1 H 0 1 N N N N N N 9.979 -29.501 -27.507 2.709 0.924 -1.718 H11 FUD 13
FUD H12 2H1 H 0 1 N N N N N N 11.533 -28.769 -28.035 2.039 1.874 -0.370 H12 FUD 14
FUD H3 H3 H 0 1 N N N N N N 9.778 -31.762 -30.138 0.490 -0.485 -1.614 H3 FUD 15
FUD H4 H4 H 0 1 N N N N N N 8.958 -32.213 -28.224 -0.280 1.348 -0.186 H4 FUD 16
FUD H5 H5 H 0 1 N N N N N N 11.749 -32.864 -27.175 -2.013 -1.143 0.146 H5 FUD 17
FUD H61 1H6 H 0 1 N N N N N N 9.588 -33.166 -25.791 -2.666 0.825 1.565 H61 FUD 18
FUD H62 2H6 H 0 1 N N N N N N 9.128 -34.425 -26.995 -2.768 1.812 0.088 H62 FUD 19
FUD HO1 HO1 H 0 1 N N N N N N 9.674 -27.286 -27.791 4.427 1.899 -0.375 HO1 FUD 20
FUD HO3 HO3 H 0 1 N N N N N N 11.860 -32.016 -30.673 0.346 -2.132 0.773 HO3 FUD 21
FUD HO4 HO4 H 0 1 N N N N N N 10.048 -31.374 -26.176 -0.374 -0.624 1.944 HO4 FUD 22
FUD HO5 HO5 H 0 1 N N N N N N 11.063 -33.551 -29.484 -1.919 0.828 -1.983 HO5 FUD 23
FUD HO6 HO6 H 0 1 N N N N N N 10.962 -35.572 -26.424 -4.881 0.862 0.671 HO6 FUD 24
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
FUD C1 C2 SING N N 1
FUD C1 O1 SING N N 2
FUD C2 C3 SING N N 3
FUD C2 O2 DOUB N N 4
FUD C3 C4 SING N N 5
FUD C3 O3 SING N N 6
FUD C4 C5 SING N N 7
FUD C4 O4 SING N N 8
FUD C5 C6 SING N N 9
FUD C5 O5 SING N N 10
FUD C6 O6 SING N N 11
FUD C1 H11 SING N N 12
FUD C1 H12 SING N N 13
FUD C3 H3 SING N N 14
FUD C4 H4 SING N N 15
FUD C5 H5 SING N N 16
FUD C6 H61 SING N N 17
FUD C6 H62 SING N N 18
FUD O1 HO1 SING N N 19
FUD O3 HO3 SING N N 20
FUD O4 HO4 SING N N 21
FUD O5 HO5 SING N N 22
FUD O6 HO6 SING N N 23
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
FUD SMILES ACDLabs 10.04 O=C(C(O)C(O)C(O)CO)CO
FUD SMILES_CANONICAL CACTVS 3.341 OC[C@@H](O)[C@@H](O)[C@H](O)C(=O)CO
FUD SMILES CACTVS 3.341 OC[CH](O)[CH](O)[CH](O)C(=O)CO
FUD SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 C([C@H]([C@H]([C@@H](C(=O)CO)O)O)O)O
FUD SMILES "OpenEye OEToolkits" 1.5.0 C(C(C(C(C(=O)CO)O)O)O)O
FUD InChI InChI 1.03 InChI=1S/C6H12O6/c7-1-3(9)5(11)6(12)4(10)2-8/h3,5-9,11-12H,1-2H2/t3-,5-,6-/m1/s1
FUD InChIKey InChI 1.03 BJHIKXHVCXFQLS-UYFOZJQFSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
FUD "SYSTEMATIC NAME" ACDLabs 10.04 D-fructose
FUD "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 (3S,4R,5R)-1,3,4,5,6-pentahydroxyhexan-2-one
#
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
FUD "CARBOHYDRATE ISOMER" D PDB ?
FUD "CARBOHYDRATE PRIMARY CARBONYL GROUP" ketose PDB ?
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
FUD 'Create component' 2007-08-15 PDBJ
FUD 'Modify descriptor' 2011-06-04 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
FUD C1 C 5.104 -0.375 1
FUD C2 C 6.404 0.375 2
FUD C3 C 7.702 -0.375 3
FUD C4 C 9.002 0.375 4
FUD C5 C 10.301 -0.375 5
FUD C6 C 11.600 0.375 6
FUD O1 O 3.805 0.375 7
FUD O2 O 6.404 1.875 8
FUD O3 O 7.702 -1.875 9
FUD O4 O 9.002 1.875 10
FUD O5 O 10.301 -1.875 11
FUD O6 O 12.899 -0.375 12
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
FUD C1 C2 SINGLE NONE 1
FUD C1 O1 SINGLE NONE 2
FUD C2 C3 SINGLE NONE 3
FUD C2 O2 DOUBLE NONE 4
FUD C3 C4 SINGLE NONE 5
FUD C3 O3 SINGLE BEGINDASH 6
FUD C4 C5 SINGLE NONE 7
FUD C4 O4 SINGLE BEGINDASH 8
FUD C5 C6 SINGLE NONE 9
FUD C5 O5 SINGLE BEGINWEDGE 10
FUD C6 O6 SINGLE NONE 11
#
#
#
_pdbe_chem_comp_rdkit_properties.comp_id FUD
_pdbe_chem_comp_rdkit_properties.exactmw 180.063
_pdbe_chem_comp_rdkit_properties.amw 180.156
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 6
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 10
_pdbe_chem_comp_rdkit_properties.NumHBD 5
_pdbe_chem_comp_rdkit_properties.NumHBA 6
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 12
_pdbe_chem_comp_rdkit_properties.NumAtoms 24
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 6
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.833
_pdbe_chem_comp_rdkit_properties.NumRings 0
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 3
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 85.990
_pdbe_chem_comp_rdkit_properties.tpsa 118.220
_pdbe_chem_comp_rdkit_properties.CrippenClogP -3.377
_pdbe_chem_comp_rdkit_properties.CrippenMR 37.199
_pdbe_chem_comp_rdkit_properties.chi0v 5.449
_pdbe_chem_comp_rdkit_properties.chi1v 2.475
_pdbe_chem_comp_rdkit_properties.chi2v 0.804
_pdbe_chem_comp_rdkit_properties.chi3v 0.804
_pdbe_chem_comp_rdkit_properties.chi4v 0.299
_pdbe_chem_comp_rdkit_properties.chi0n 17.449
_pdbe_chem_comp_rdkit_properties.chi1n 8.016
_pdbe_chem_comp_rdkit_properties.chi2n 0.804
_pdbe_chem_comp_rdkit_properties.chi3n 0.804
_pdbe_chem_comp_rdkit_properties.chi4n 0.299
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.530
_pdbe_chem_comp_rdkit_properties.kappa1 2.490
_pdbe_chem_comp_rdkit_properties.kappa2 5.175
_pdbe_chem_comp_rdkit_properties.kappa3 2.839
_pdbe_chem_comp_rdkit_properties.Phi 1.074
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
FUD UniChem 'Guide to Pharmacology' 4654
FUD UniChem 'KEGG LIGAND' C10906
FUD UniChem ChEBI 48095
FUD UniChem ZINC ZINC000001532049
FUD UniChem eMolecules 29781400
FUD UniChem eMolecules 6718794
FUD UniChem fdasrs 02T79V874P
FUD UniChem fdasrs 6YSS42VSEV
FUD UniChem PharmGKB PA449716
FUD UniChem NMRShiftDB 60019458
FUD UniChem ACTor 10597-68-9
FUD UniChem ACTor 30237-26-4
FUD UniChem Nikkaji J4.580B
FUD UniChem MetaboLights MTBLC48095
FUD UniChem BRENDA 210606
FUD UniChem Rhea 48095
FUD UniChem ChemicalBook CB4965820
FUD UniChem ChemicalBook CB6546182
FUD UniChem ChemicalBook CB7944707
FUD UniChem rxnorm 'FRUCTOSE, DL-'
FUD UniChem MedChemExpress HY-N7092
FUD UniChem 'Probes And Drugs' PD014528
FUD UniChem SureChEMBL SCHEMBL3965
FUD UniChem 'PubChem TPHARMA' 15339912
FUD UniChem 'PubChem TPHARMA' 16877774
FUD UniChem PubChem 5984
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
FUD C1 -3.085 -0.221 0.988 ETKDGv3 1
FUD C2 -2.014 0.526 0.239 ETKDGv3 2
FUD C3 -0.681 -0.116 -0.077 ETKDGv3 3
FUD C4 0.457 0.585 0.712 ETKDGv3 4
FUD C5 1.777 -0.234 0.781 ETKDGv3 5
FUD C6 2.480 -0.448 -0.577 ETKDGv3 6
FUD O1 -4.193 -0.436 0.158 ETKDGv3 7
FUD O2 -2.232 1.674 -0.120 ETKDGv3 8
FUD O3 -0.449 -0.043 -1.461 ETKDGv3 9
FUD O4 0.679 1.902 0.265 ETKDGv3 10
FUD O5 2.663 0.356 1.701 ETKDGv3 11
FUD O6 3.680 -1.151 -0.397 ETKDGv3 12
FUD H11 -2.708 -1.207 1.333 ETKDGv3 13
FUD H12 -3.378 0.355 1.895 ETKDGv3 14
FUD H3 -0.702 -1.186 0.234 ETKDGv3 15
FUD H4 0.106 0.662 1.766 ETKDGv3 16
FUD H5 1.522 -1.241 1.180 ETKDGv3 17
FUD H61 2.722 0.529 -1.044 ETKDGv3 18
FUD H62 1.824 -1.011 -1.275 ETKDGv3 19
FUD HO1 -4.702 0.416 0.135 ETKDGv3 20
FUD HO3 -1.043 -0.716 -1.887 ETKDGv3 21
FUD HO4 0.903 1.870 -0.699 ETKDGv3 22
FUD HO5 2.943 1.232 1.328 ETKDGv3 23
FUD HO6 3.432 -2.097 -0.222 ETKDGv3 24
#