data_FKZ
#
_chem_comp.id FKZ
_chem_comp.name octan-1-amine
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C8 H19 N"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2018-07-18
_chem_comp.pdbx_modified_date 2019-07-19
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 129.243
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code FKZ
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6H3E
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
FKZ C1 C1 C 0 1 N N N N N N 62.379 68.967 77.381 -3.717 -0.481 0.002 C1 FKZ 1
FKZ C2 C2 C 0 1 N N N N N N 63.305 69.929 78.160 -2.466 0.399 0.025 C2 FKZ 2
FKZ C3 C3 C 0 1 N N N N N N 64.800 69.854 77.758 -1.219 -0.488 -0.005 C3 FKZ 3
FKZ C4 C4 C 0 1 N N N N N N 65.092 70.106 76.257 0.033 0.392 0.018 C4 FKZ 4
FKZ C5 C5 C 0 1 N N N N N N 64.513 71.425 75.688 1.280 -0.495 -0.012 C5 FKZ 5
FKZ C6 C6 C 0 1 N N N N N N 65.058 72.722 76.329 2.531 0.385 0.010 C6 FKZ 6
FKZ C7 C7 C 0 1 N N N N N N 66.595 72.793 76.286 3.778 -0.502 -0.019 C7 FKZ 7
FKZ C8 C8 C 0 1 N N N N N N 67.155 74.200 76.533 5.030 0.378 0.003 C8 FKZ 8
FKZ N N1 N 0 1 N N N N N N 62.526 67.569 77.799 -4.914 0.370 0.031 N FKZ 9
FKZ H12 H1 H 0 1 N N N N N N 62.619 69.040 76.310 -3.722 -1.084 -0.906 H12 FKZ 10
FKZ H11 H2 H 0 1 N N N N N N 61.336 69.274 77.545 -3.717 -1.136 0.873 H11 FKZ 11
FKZ H22 H3 H 0 1 N N N N N N 62.955 70.957 77.987 -2.466 1.054 -0.846 H22 FKZ 12
FKZ H21 H4 H 0 1 N N N N N N 63.225 69.690 79.231 -2.461 1.002 0.933 H21 FKZ 13
FKZ H31 H5 H 0 1 N N N N N N 65.171 68.851 78.013 -1.218 -1.143 0.866 H31 FKZ 14
FKZ H32 H6 H 0 1 N N N N N N 65.348 70.608 78.343 -1.223 -1.091 -0.913 H32 FKZ 15
FKZ H41 H7 H 0 1 N N N N N N 64.666 69.271 75.682 0.032 1.047 -0.854 H41 FKZ 16
FKZ H42 H8 H 0 1 N N N N N N 66.183 70.126 76.121 0.037 0.995 0.926 H42 FKZ 17
FKZ H52 H9 H 0 1 N N N N N N 64.739 71.458 74.612 1.280 -1.150 0.859 H52 FKZ 18
FKZ H51 H10 H 0 1 N N N N N N 63.423 71.407 75.833 1.275 -1.098 -0.920 H51 FKZ 19
FKZ H62 H11 H 0 1 N N N N N N 64.649 73.585 75.784 2.531 1.040 -0.861 H62 FKZ 20
FKZ H61 H12 H 0 1 N N N N N N 64.731 72.762 77.379 2.536 0.988 0.918 H61 FKZ 21
FKZ H72 H13 H 0 1 N N N N N N 66.995 72.119 77.058 3.779 -1.157 0.852 H72 FKZ 22
FKZ H71 H14 H 0 1 N N N N N N 66.931 72.455 75.295 3.774 -1.105 -0.927 H71 FKZ 23
FKZ H81 H15 H 0 1 N N N N N N 68.254 74.171 76.487 5.029 1.033 -0.868 H81 FKZ 24
FKZ H83 H16 H 0 1 N N N N N N 66.774 74.887 75.763 5.034 0.981 0.911 H83 FKZ 25
FKZ H82 H17 H 0 1 N N N N N N 66.839 74.551 77.526 5.918 -0.254 -0.018 H82 FKZ 26
FKZ H H18 H 0 1 N N N N N N 61.906 66.994 77.265 -4.906 1.031 -0.732 H FKZ 27
FKZ H1 H19 H 0 1 N N N N N N 63.469 67.273 77.647 -5.755 -0.188 0.017 H1 FKZ 28
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
FKZ C5 C4 SING N N 1
FKZ C5 C6 SING N N 2
FKZ C4 C3 SING N N 3
FKZ C7 C6 SING N N 4
FKZ C7 C8 SING N N 5
FKZ C1 N SING N N 6
FKZ C1 C2 SING N N 7
FKZ C3 C2 SING N N 8
FKZ C1 H12 SING N N 9
FKZ C1 H11 SING N N 10
FKZ C2 H22 SING N N 11
FKZ C2 H21 SING N N 12
FKZ C3 H31 SING N N 13
FKZ C3 H32 SING N N 14
FKZ C4 H41 SING N N 15
FKZ C4 H42 SING N N 16
FKZ C5 H52 SING N N 17
FKZ C5 H51 SING N N 18
FKZ C6 H62 SING N N 19
FKZ C6 H61 SING N N 20
FKZ C7 H72 SING N N 21
FKZ C7 H71 SING N N 22
FKZ C8 H81 SING N N 23
FKZ C8 H83 SING N N 24
FKZ C8 H82 SING N N 25
FKZ N H SING N N 26
FKZ N H1 SING N N 27
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
FKZ InChI InChI 1.03 InChI=1S/C8H19N/c1-2-3-4-5-6-7-8-9/h2-9H2,1H3
FKZ InChIKey InChI 1.03 IOQPZZOEVPZRBK-UHFFFAOYSA-N
FKZ SMILES_CANONICAL CACTVS 3.385 CCCCCCCCN
FKZ SMILES CACTVS 3.385 CCCCCCCCN
FKZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 CCCCCCCCN
FKZ SMILES "OpenEye OEToolkits" 2.0.6 CCCCCCCCN
#
_pdbx_chem_comp_identifier.comp_id FKZ
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.6
_pdbx_chem_comp_identifier.identifier octan-1-amine
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
FKZ 'Create component' 2018-07-18 EBI
FKZ 'Initial release' 2019-07-24 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2023.03.3 'Core functionality.'
pdbeccdutils 0.8.4 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
FKZ C1 C 4.299 0.840 1
FKZ C2 C 5.598 0.090 2
FKZ C3 C 6.897 0.840 3
FKZ C4 C 8.196 0.090 4
FKZ C5 C 9.495 0.840 5
FKZ C6 C 10.794 0.090 6
FKZ C7 C 12.093 0.840 7
FKZ C8 C 13.392 0.090 8
FKZ N N 3.000 0.090 9
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
FKZ C5 C4 SINGLE NONE 1
FKZ C5 C6 SINGLE NONE 2
FKZ C4 C3 SINGLE NONE 3
FKZ C7 C6 SINGLE NONE 4
FKZ C7 C8 SINGLE NONE 5
FKZ C1 N SINGLE NONE 6
FKZ C1 C2 SINGLE NONE 7
FKZ C3 C2 SINGLE NONE 8
#
#
#
_pdbe_chem_comp_rdkit_properties.comp_id FKZ
_pdbe_chem_comp_rdkit_properties.exactmw 129.152
_pdbe_chem_comp_rdkit_properties.amw 129.247
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 1
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 1
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 9
_pdbe_chem_comp_rdkit_properties.NumAtoms 28
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 1
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 1
_pdbe_chem_comp_rdkit_properties.NumRings 0
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 85.444
_pdbe_chem_comp_rdkit_properties.tpsa 26.020
_pdbe_chem_comp_rdkit_properties.CrippenClogP 2.306
_pdbe_chem_comp_rdkit_properties.CrippenMR 42.430
_pdbe_chem_comp_rdkit_properties.chi0v 4.447
_pdbe_chem_comp_rdkit_properties.chi1v 1.974
_pdbe_chem_comp_rdkit_properties.chi2v 0.368
_pdbe_chem_comp_rdkit_properties.chi3v 0.368
_pdbe_chem_comp_rdkit_properties.chi4v 0.153
_pdbe_chem_comp_rdkit_properties.chi0n 23.447
_pdbe_chem_comp_rdkit_properties.chi1n 11.368
_pdbe_chem_comp_rdkit_properties.chi2n 0.368
_pdbe_chem_comp_rdkit_properties.chi3n 0.368
_pdbe_chem_comp_rdkit_properties.chi4n 0.153
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.040
_pdbe_chem_comp_rdkit_properties.kappa1 0.781
_pdbe_chem_comp_rdkit_properties.kappa2 7.960
_pdbe_chem_comp_rdkit_properties.kappa3 7.960
_pdbe_chem_comp_rdkit_properties.Phi 0.691
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
FKZ UniChem ChEMBL CHEMBL1160509
FKZ UniChem PDBe FKZ
FKZ UniChem 'KEGG LIGAND' C01740
FKZ UniChem ChEBI 7728
FKZ UniChem ZINC ZINC000001529275
FKZ UniChem eMolecules 529485
FKZ UniChem fdasrs SF0V8U4T67
FKZ UniChem SureChEMBL SCHEMBL25545
FKZ UniChem HMDB HMDB0255916
FKZ UniChem NMRShiftDB 10016938
FKZ UniChem ACTor 68037-94-5
FKZ UniChem 'EPA CompTox Dashboard' DTXSID8021939
FKZ UniChem MetaboLights MTBLC7728
FKZ UniChem BRENDA 12640
FKZ UniChem BRENDA 234418
FKZ UniChem BRENDA 3830
FKZ UniChem BRENDA 48409
FKZ UniChem ChemicalBook CB1292556
FKZ UniChem Nikkaji J5.115B
FKZ UniChem 'PubChem TPHARMA' 14867254
FKZ UniChem PubChem 8143
FKZ UniChem Mcule MCULE-6095227778
FKZ UniChem ACTor 111-86-4
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
FKZ C1 3.756 -0.133 -0.340 ETKDGv3 1
FKZ C2 2.325 -0.115 0.204 ETKDGv3 2
FKZ C3 1.434 -1.108 -0.557 ETKDGv3 3
FKZ C4 0.025 -1.221 0.045 ETKDGv3 4
FKZ C5 -0.827 0.033 -0.202 ETKDGv3 5
FKZ C6 -2.263 -0.172 0.295 ETKDGv3 6
FKZ C7 -3.112 1.082 0.059 ETKDGv3 7
FKZ C8 -4.542 0.881 0.551 ETKDGv3 8
FKZ N 4.577 0.842 0.373 ETKDGv3 9
FKZ H12 4.195 -1.149 -0.225 ETKDGv3 10
FKZ H11 3.742 0.126 -1.422 ETKDGv3 11
FKZ H22 1.919 0.914 0.099 ETKDGv3 12
FKZ H21 2.342 -0.382 1.284 ETKDGv3 13
FKZ H31 1.364 -0.812 -1.627 ETKDGv3 14
FKZ H32 1.905 -2.115 -0.517 ETKDGv3 15
FKZ H41 0.096 -1.421 1.137 ETKDGv3 16
FKZ H42 -0.479 -2.095 -0.425 ETKDGv3 17
FKZ H52 -0.383 0.899 0.334 ETKDGv3 18
FKZ H51 -0.845 0.260 -1.291 ETKDGv3 19
FKZ H62 -2.721 -1.031 -0.245 ETKDGv3 20
FKZ H61 -2.246 -0.406 1.382 ETKDGv3 21
FKZ H72 -3.136 1.320 -1.027 ETKDGv3 22
FKZ H71 -2.664 1.945 0.598 ETKDGv3 23
FKZ H81 -5.132 1.804 0.367 ETKDGv3 24
FKZ H83 -4.549 0.666 1.641 ETKDGv3 25
FKZ H82 -5.022 0.039 0.008 ETKDGv3 26
FKZ H 5.520 0.854 -0.079 ETKDGv3 27
FKZ H1 4.720 0.496 1.350 ETKDGv3 28
#