data_F0C
#
_chem_comp.id F0C
_chem_comp.name 1-[(4-methoxyphenyl)methyl]-3,4,5,6,7,8-hexahydroisoquinoline
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C17 H21 N O"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2020-03-02
_chem_comp.pdbx_modified_date 2020-05-29
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 255.355
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code F0C
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6LQL
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
F0C C13 C1 C 0 1 Y N N N N N 1.853 37.764 89.505 -1.376 0.871 -0.142 C13 F0C 1
F0C C14 C2 C 0 1 Y N N N N N 2.784 40.337 89.990 -4.031 0.174 0.197 C14 F0C 2
F0C C17 C3 C 0 1 Y N N N N N 3.588 39.437 89.299 -3.398 -0.068 -1.014 C17 F0C 3
F0C C31 C4 C 0 1 Y N N N N N 1.056 38.665 90.206 -2.001 1.103 1.069 C31 F0C 4
F0C C33 C5 C 0 1 N N N N N N 4.377 42.102 89.556 -5.998 -0.763 -0.755 C33 F0C 5
F0C N N1 N 0 1 N N N N N N 2.794 35.003 87.841 0.409 -1.008 0.476 N F0C 6
F0C C C6 C 0 1 N N N N N N 4.124 33.758 89.974 3.154 -0.881 -0.085 C F0C 7
F0C C1 C7 C 0 1 N N N N N N 3.276 34.947 90.171 2.416 0.218 -0.032 C1 F0C 8
F0C C11 C8 C 0 1 N N N N N N 4.182 33.130 88.601 2.461 -2.228 -0.055 C11 F0C 9
F0C C12 C9 C 0 1 N N N N N N 1.336 36.368 89.229 0.071 1.251 -0.326 C12 F0C 10
F0C C15 C10 C 0 1 Y N N N N N 3.123 38.146 89.066 -2.074 0.286 -1.183 C15 F0C 11
F0C C2 C11 C 0 1 N N N N N N 2.497 35.428 89.001 0.949 0.089 0.063 C2 F0C 12
F0C C3 C12 C 0 1 N N N N N N 3.970 34.199 87.521 1.238 -2.152 0.857 C3 F0C 13
F0C C32 C13 C 0 1 Y N N N N N 1.523 39.955 90.446 -3.327 0.756 1.241 C32 F0C 14
F0C C4 C14 C 0 1 N N N N N N 4.712 33.901 92.281 5.155 0.511 -0.617 C4 F0C 15
F0C C5 C15 C 0 1 N N N N N N 3.933 35.044 92.462 4.490 1.572 0.269 C5 F0C 16
F0C C6 C16 C 0 1 N N N N N N 3.182 35.567 91.415 3.000 1.605 -0.065 C6 F0C 17
F0C C7 C17 C 0 1 N N N N N N 4.837 33.257 91.041 4.656 -0.862 -0.172 C7 F0C 18
F0C O16 O1 O 0 1 N N N N N N 3.239 41.606 90.244 -5.336 -0.168 0.363 O16 F0C 19
F0C H1 H1 H 0 1 N N N N N N 4.564 39.737 88.947 -3.942 -0.529 -1.826 H1 F0C 20
F0C H2 H2 H 0 1 N N N N N N 0.081 38.365 90.562 -1.453 1.556 1.882 H2 F0C 21
F0C H3 H3 H 0 1 N N N N N N 4.589 43.129 89.889 -7.031 -0.987 -0.489 H3 F0C 22
F0C H4 H4 H 0 1 N N N N N N 5.244 41.460 89.771 -5.982 -0.071 -1.597 H4 F0C 23
F0C H5 H5 H 0 1 N N N N N N 4.180 42.101 88.474 -5.487 -1.685 -1.033 H5 F0C 24
F0C H6 H6 H 0 1 N N N N N N 3.394 32.367 88.517 2.146 -2.496 -1.064 H6 F0C 25
F0C H7 H7 H 0 1 N N N N N N 5.166 32.659 88.458 3.150 -2.983 0.323 H7 F0C 26
F0C H8 H8 H 0 1 N N N N N N 0.699 36.385 88.333 0.249 1.507 -1.371 H8 F0C 27
F0C H9 H9 H 0 1 N N N N N N 0.748 36.019 90.091 0.304 2.109 0.303 H9 F0C 28
F0C H10 H10 H 0 1 N N N N N N 3.747 37.436 88.543 -1.583 0.107 -2.128 H10 F0C 29
F0C H11 H11 H 0 1 N N N N N N 3.823 33.709 86.547 1.563 -2.036 1.891 H11 F0C 30
F0C H12 H12 H 0 1 N N N N N N 4.855 34.850 87.474 0.656 -3.069 0.761 H12 F0C 31
F0C H13 H13 H 0 1 N N N N N N 0.908 40.660 90.986 -3.818 0.945 2.184 H13 F0C 32
F0C H14 H14 H 0 1 N N N N N N 4.313 33.148 92.976 4.885 0.680 -1.660 H14 F0C 33
F0C H15 H15 H 0 1 N N N N N N 4.617 35.842 92.786 4.627 1.312 1.319 H15 F0C 34
F0C H16 H16 H 0 1 N N N N N N 3.490 36.615 91.283 2.865 2.029 -1.060 H16 F0C 35
F0C H17 H17 H 0 1 N N N N N N 4.522 32.213 91.182 5.076 -1.096 0.807 H17 F0C 36
F0C H18 H18 H 0 1 N N N N N N 5.733 34.177 92.585 6.238 0.564 -0.505 H18 F0C 37
F0C H19 H19 H 0 1 N N N N N N 3.225 34.816 93.273 4.934 2.548 0.071 H19 F0C 38
F0C H20 H20 H 0 1 N N N N N N 2.126 35.531 91.720 2.483 2.229 0.664 H20 F0C 39
F0C H21 H21 H 0 1 N N N N N N 5.901 33.285 90.764 4.984 -1.613 -0.891 H21 F0C 40
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
F0C C3 N SING N N 1
F0C C3 C11 SING N N 2
F0C N C2 DOUB N N 3
F0C C11 C SING N N 4
F0C C2 C12 SING N N 5
F0C C2 C1 SING N N 6
F0C C15 C17 DOUB Y N 7
F0C C15 C13 SING Y N 8
F0C C12 C13 SING N N 9
F0C C17 C14 SING Y N 10
F0C C13 C31 DOUB Y N 11
F0C C33 O16 SING N N 12
F0C C C1 DOUB N N 13
F0C C C7 SING N N 14
F0C C14 O16 SING N N 15
F0C C14 C32 DOUB Y N 16
F0C C1 C6 SING N N 17
F0C C31 C32 SING Y N 18
F0C C7 C4 SING N N 19
F0C C6 C5 SING N N 20
F0C C4 C5 SING N N 21
F0C C17 H1 SING N N 22
F0C C31 H2 SING N N 23
F0C C33 H3 SING N N 24
F0C C33 H4 SING N N 25
F0C C33 H5 SING N N 26
F0C C11 H6 SING N N 27
F0C C11 H7 SING N N 28
F0C C12 H8 SING N N 29
F0C C12 H9 SING N N 30
F0C C15 H10 SING N N 31
F0C C3 H11 SING N N 32
F0C C3 H12 SING N N 33
F0C C32 H13 SING N N 34
F0C C4 H14 SING N N 35
F0C C5 H15 SING N N 36
F0C C6 H16 SING N N 37
F0C C7 H17 SING N N 38
F0C C4 H18 SING N N 39
F0C C5 H19 SING N N 40
F0C C6 H20 SING N N 41
F0C C7 H21 SING N N 42
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
F0C InChI InChI 1.03 InChI=1S/C17H21NO/c1-19-15-8-6-13(7-9-15)12-17-16-5-3-2-4-14(16)10-11-18-17/h6-9H,2-5,10-12H2,1H3
F0C InChIKey InChI 1.03 IYZRINJHKVQAQC-UHFFFAOYSA-N
F0C SMILES_CANONICAL CACTVS 3.385 COc1ccc(CC2=NCCC3=C2CCCC3)cc1
F0C SMILES CACTVS 3.385 COc1ccc(CC2=NCCC3=C2CCCC3)cc1
F0C SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 COc1ccc(cc1)CC2=NCCC3=C2CCCC3
F0C SMILES "OpenEye OEToolkits" 2.0.7 COc1ccc(cc1)CC2=NCCC3=C2CCCC3
#
_pdbx_chem_comp_identifier.comp_id F0C
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier 1-[(4-methoxyphenyl)methyl]-3,4,5,6,7,8-hexahydroisoquinoline
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
F0C 'Create component' 2020-03-02 PDBJ
F0C 'Initial release' 2020-06-03 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
F0C C13 C 8.298 -0.776 1
F0C C14 C 10.896 -2.276 2
F0C C17 C 10.896 -0.776 3
F0C C31 C 8.298 -2.276 4
F0C C33 C 12.195 -4.526 5
F0C N N 8.298 2.224 6
F0C C C 5.700 3.724 7
F0C C1 C 5.700 2.224 8
F0C C11 C 6.999 4.474 9
F0C C12 C 6.999 -0.026 10
F0C C15 C 9.597 -0.026 11
F0C C2 C 6.999 1.474 12
F0C C3 C 8.298 3.724 13
F0C C32 C 9.597 -3.026 14
F0C C4 C 3.000 3.755 15
F0C C5 C 3.000 2.193 16
F0C C6 C 4.359 1.422 17
F0C C7 C 4.359 4.526 18
F0C O16 O 12.195 -3.026 19
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
F0C C3 N SINGLE NONE 1
F0C C3 C11 SINGLE NONE 2
F0C N C2 DOUBLE NONE 3
F0C C11 C SINGLE NONE 4
F0C C2 C12 SINGLE NONE 5
F0C C2 C1 SINGLE NONE 6
F0C C15 C17 SINGLE NONE 7
F0C C15 C13 DOUBLE NONE 8
F0C C12 C13 SINGLE NONE 9
F0C C17 C14 DOUBLE NONE 10
F0C C13 C31 SINGLE NONE 11
F0C C33 O16 SINGLE NONE 12
F0C C C1 DOUBLE NONE 13
F0C C C7 SINGLE NONE 14
F0C C14 O16 SINGLE NONE 15
F0C C14 C32 SINGLE NONE 16
F0C C1 C6 SINGLE NONE 17
F0C C31 C32 DOUBLE NONE 18
F0C C7 C4 SINGLE NONE 19
F0C C6 C5 SINGLE NONE 20
F0C C4 C5 SINGLE NONE 21
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
F0C MurckoScaffold S1 scaffold c1ccc(CC2=NCCC3=C2CCCC3)cc1 InChI=1S/C16H19N/c1-2-6-13(7-3-1)12-16-15-9-5-4-8-14(15)10-11-17-16/h1-3,6-7H,4-5,8-12H2 JHJFKVQDORTIDS-UHFFFAOYSA-N
F0C phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
F0C C13 S1 1
F0C C14 S1 1
F0C C17 S1 1
F0C C31 S1 1
F0C N S1 1
F0C C S1 1
F0C C1 S1 1
F0C C11 S1 1
F0C C12 S1 1
F0C C15 S1 1
F0C C2 S1 1
F0C C3 S1 1
F0C C32 S1 1
F0C C4 S1 1
F0C C5 S1 1
F0C C6 S1 1
F0C C7 S1 1
F0C C13 F1 1
F0C C15 F1 1
F0C C17 F1 1
F0C C14 F1 1
F0C C32 F1 1
F0C C31 F1 1
#
_pdbe_chem_comp_rdkit_properties.comp_id F0C
_pdbe_chem_comp_rdkit_properties.exactmw 255.162
_pdbe_chem_comp_rdkit_properties.amw 255.361
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 2
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 0
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 4
_pdbe_chem_comp_rdkit_properties.NumHBD 0
_pdbe_chem_comp_rdkit_properties.NumHBA 2
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 19
_pdbe_chem_comp_rdkit_properties.NumAtoms 40
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 2
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.471
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 144.258
_pdbe_chem_comp_rdkit_properties.tpsa 21.590
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.436
_pdbe_chem_comp_rdkit_properties.CrippenMR 78.235
_pdbe_chem_comp_rdkit_properties.chi0v 9.355
_pdbe_chem_comp_rdkit_properties.chi1v 5.105
_pdbe_chem_comp_rdkit_properties.chi2v 2.220
_pdbe_chem_comp_rdkit_properties.chi3v 2.220
_pdbe_chem_comp_rdkit_properties.chi4v 1.403
_pdbe_chem_comp_rdkit_properties.chi0n 30.355
_pdbe_chem_comp_rdkit_properties.chi1n 15.605
_pdbe_chem_comp_rdkit_properties.chi2n 2.220
_pdbe_chem_comp_rdkit_properties.chi3n 2.220
_pdbe_chem_comp_rdkit_properties.chi4n 1.403
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.570
_pdbe_chem_comp_rdkit_properties.kappa1 2.878
_pdbe_chem_comp_rdkit_properties.kappa2 5.600
_pdbe_chem_comp_rdkit_properties.kappa3 2.725
_pdbe_chem_comp_rdkit_properties.Phi 0.848
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
F0C UniChem ZINC ZINC000033506879
F0C UniChem fdasrs VBJ2EL4DFM
F0C UniChem Nikkaji J261.627K
F0C UniChem 'EPA CompTox Dashboard' DTXSID60199080
F0C UniChem SureChEMBL SCHEMBL2065396
F0C UniChem 'PubChem TPHARMA' 16108643
F0C UniChem PubChem 3016591
F0C UniChem ACTor 51072-35-6
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
F0C C13 1.793 -0.343 0.720 ETKDGv3 1
F0C C14 4.327 0.813 0.179 ETKDGv3 2
F0C C17 4.065 -0.459 -0.185 ETKDGv3 3
F0C C31 2.077 1.058 1.111 ETKDGv3 4
F0C C33 6.673 0.806 -0.701 ETKDGv3 5
F0C N -0.178 -0.302 -1.298 ETKDGv3 6
F0C C -2.779 0.440 -0.570 ETKDGv3 7
F0C C1 -2.009 -0.277 0.273 ETKDGv3 8
F0C C11 -2.189 1.006 -1.840 ETKDGv3 9
F0C C12 0.426 -0.926 0.974 ETKDGv3 10
F0C C15 2.742 -1.057 0.091 ETKDGv3 11
F0C C2 -0.573 -0.489 -0.069 ETKDGv3 12
F0C C3 -1.099 0.069 -2.373 ETKDGv3 13
F0C C32 3.274 1.600 0.857 ETKDGv3 14
F0C C4 -4.866 -0.632 0.233 ETKDGv3 15
F0C C5 -4.052 -1.357 1.333 ETKDGv3 16
F0C C6 -2.621 -0.812 1.549 ETKDGv3 17
F0C C7 -4.222 0.682 -0.219 ETKDGv3 18
F0C O16 5.564 1.431 -0.060 ETKDGv3 19
F0C H1 4.807 -1.066 -0.686 ETKDGv3 20
F0C H2 1.314 1.648 1.603 ETKDGv3 21
F0C H3 7.000 -0.081 -0.119 ETKDGv3 22
F0C H4 7.514 1.527 -0.754 ETKDGv3 23
F0C H5 6.396 0.506 -1.734 ETKDGv3 24
F0C H6 -2.973 1.141 -2.616 ETKDGv3 25
F0C H7 -1.742 1.998 -1.615 ETKDGv3 26
F0C H8 0.097 -0.591 1.981 ETKDGv3 27
F0C H9 0.466 -2.037 0.992 ETKDGv3 28
F0C H10 2.550 -2.075 -0.226 ETKDGv3 29
F0C H11 -0.534 0.565 -3.190 ETKDGv3 30
F0C H12 -1.572 -0.851 -2.780 ETKDGv3 31
F0C H13 3.473 2.624 1.146 ETKDGv3 32
F0C H14 -5.895 -0.429 0.600 ETKDGv3 33
F0C H15 -3.987 -2.436 1.069 ETKDGv3 34
F0C H16 -2.003 -1.630 1.975 ETKDGv3 35
F0C H17 -4.781 1.094 -1.086 ETKDGv3 36
F0C H18 -4.957 -1.300 -0.652 ETKDGv3 37
F0C H19 -4.601 -1.296 2.297 ETKDGv3 38
F0C H20 -2.651 0.014 2.292 ETKDGv3 39
F0C H21 -4.275 1.423 0.608 ETKDGv3 40
#