data_ETZ
#
_chem_comp.id ETZ
_chem_comp.name "diethyl ether"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C4 H10 O"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2012-12-14
_chem_comp.pdbx_modified_date 2013-09-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 74.122
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code ETZ
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4HP2
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
ETZ O1 O1 O 0 1 N N N N N N 13.401 -2.755 13.297 0.000 -0.248 0.000 O1 ETZ 1
ETZ C1 C1 C 0 1 N N N N N N 15.174 -2.390 14.869 -2.412 -0.402 0.000 C1 ETZ 2
ETZ C2 C2 C 0 1 N N N N N N 13.685 -2.583 14.685 -1.199 0.530 -0.000 C2 ETZ 3
ETZ C3 C3 C 0 1 N N N N N N 11.955 -3.056 13.240 1.199 0.530 -0.000 C3 ETZ 4
ETZ C4 C4 C 0 1 N N N N N N 11.600 -3.529 11.885 2.412 -0.402 0.000 C4 ETZ 5
ETZ H1 H1 H 0 1 N N N N N N 15.398 -2.257 15.938 -2.387 -1.031 -0.890 H1 ETZ 6
ETZ H2 H2 H 0 1 N N N N N N 15.708 -3.274 14.490 -2.387 -1.031 0.890 H2 ETZ 7
ETZ H3 H3 H 0 1 N N N N N N 15.500 -1.499 14.313 -3.326 0.192 -0.000 H3 ETZ 8
ETZ H4 H4 H 0 1 N N N N N N 13.150 -1.699 15.063 -1.223 1.159 0.890 H4 ETZ 9
ETZ H5 H5 H 0 1 N N N N N N 13.358 -3.475 15.240 -1.223 1.159 -0.890 H5 ETZ 10
ETZ H6 H6 H 0 1 N N N N N N 11.382 -2.146 13.472 1.223 1.159 -0.890 H6 ETZ 11
ETZ H7 H7 H 0 1 N N N N N N 11.715 -3.838 13.975 1.223 1.159 0.890 H7 ETZ 12
ETZ H8 H8 H 0 1 N N N N N N 10.524 -3.753 11.844 2.387 -1.031 0.890 H8 ETZ 13
ETZ H9 H9 H 0 1 N N N N N N 11.840 -2.747 11.149 2.387 -1.031 -0.890 H9 ETZ 14
ETZ H10 H10 H 0 1 N N N N N N 12.172 -4.439 11.653 3.326 0.192 -0.000 H10 ETZ 15
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ETZ C4 C3 SING N N 1
ETZ C3 O1 SING N N 2
ETZ O1 C2 SING N N 3
ETZ C2 C1 SING N N 4
ETZ C1 H1 SING N N 5
ETZ C1 H2 SING N N 6
ETZ C1 H3 SING N N 7
ETZ C2 H4 SING N N 8
ETZ C2 H5 SING N N 9
ETZ C3 H6 SING N N 10
ETZ C3 H7 SING N N 11
ETZ C4 H8 SING N N 12
ETZ C4 H9 SING N N 13
ETZ C4 H10 SING N N 14
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
ETZ SMILES ACDLabs 12.01 ethoxyethane
ETZ InChI InChI 1.03 InChI=1S/C4H10O/c1-3-5-4-2/h3-4H2,1-2H3
ETZ InChIKey InChI 1.03 RTZKZFJDLAIYFH-UHFFFAOYSA-N
ETZ SMILES_CANONICAL CACTVS 3.370 CCOCC
ETZ SMILES CACTVS 3.370 CCOCC
ETZ SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 CCOCC
ETZ SMILES "OpenEye OEToolkits" 1.7.6 CCOCC
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
ETZ "SYSTEMATIC NAME" ACDLabs 12.01 "diethyl ether"
ETZ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 ethoxyethane
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
ETZ 'Create component' 2012-12-14 PDBJ
ETZ 'Initial release' 2013-10-02 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id ETZ
_pdbe_chem_comp_drugbank_details.drugbank_id DB13598
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name 'Diethyl ether'
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number 60-29-7
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
ETZ 'Diethyl ether' DrugBank ?
ETZ Ether DrugBank ?
#
_pdbe_chem_comp_drugbank_classification.comp_id ETZ
_pdbe_chem_comp_drugbank_classification.drugbank_id DB13598
_pdbe_chem_comp_drugbank_classification.parent 'Dialkyl ethers'
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Organooxygen compounds'
_pdbe_chem_comp_drugbank_classification.superclass 'Organic oxygen compounds'
_pdbe_chem_comp_drugbank_classification.description
"This compound belongs to the class of organic compounds known as dialkyl ethers. These are organic compounds containing the dialkyl ether functional group, with the formula ROR', where R and R' are alkyl groups."
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
ETZ O1 O 5.598 -0.375 1
ETZ C1 C 3.000 -0.375 2
ETZ C2 C 4.299 0.375 3
ETZ C3 C 6.897 0.375 4
ETZ C4 C 8.196 -0.375 5
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
ETZ C4 C3 SINGLE NONE 1
ETZ C3 O1 SINGLE NONE 2
ETZ O1 C2 SINGLE NONE 3
ETZ C2 C1 SINGLE NONE 4
#
#
#
_pdbe_chem_comp_rdkit_properties.comp_id ETZ
_pdbe_chem_comp_rdkit_properties.exactmw 74.073
_pdbe_chem_comp_rdkit_properties.amw 74.123
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 1
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 0
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 4
_pdbe_chem_comp_rdkit_properties.NumHBD 0
_pdbe_chem_comp_rdkit_properties.NumHBA 1
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 5
_pdbe_chem_comp_rdkit_properties.NumAtoms 15
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 1
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 1
_pdbe_chem_comp_rdkit_properties.NumRings 0
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 46.997
_pdbe_chem_comp_rdkit_properties.tpsa 9.230
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.043
_pdbe_chem_comp_rdkit_properties.CrippenMR 22.167
_pdbe_chem_comp_rdkit_properties.chi0v 2.408
_pdbe_chem_comp_rdkit_properties.chi1v 0.908
_pdbe_chem_comp_rdkit_properties.chi2v 0.102
_pdbe_chem_comp_rdkit_properties.chi3v 0.102
_pdbe_chem_comp_rdkit_properties.chi4v 0.026
_pdbe_chem_comp_rdkit_properties.chi0n 12.408
_pdbe_chem_comp_rdkit_properties.chi1n 5.908
_pdbe_chem_comp_rdkit_properties.chi2n 0.102
_pdbe_chem_comp_rdkit_properties.chi3n 0.102
_pdbe_chem_comp_rdkit_properties.chi4n 0.026
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.040
_pdbe_chem_comp_rdkit_properties.kappa1 0.399
_pdbe_chem_comp_rdkit_properties.kappa2 3.960
_pdbe_chem_comp_rdkit_properties.kappa3 3.960
_pdbe_chem_comp_rdkit_properties.Phi 0.316
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
ETZ UniChem DrugBank DB13598
ETZ UniChem 'KEGG LIGAND' C13240
ETZ UniChem ChEBI 35702
ETZ UniChem ZINC ZINC000001657408
ETZ UniChem fdasrs 0F5N573A2Y
ETZ UniChem HMDB HMDB0062326
ETZ UniChem NMRShiftDB 7995
ETZ UniChem ACTor 60-29-7
ETZ UniChem Nikkaji J1.925I
ETZ UniChem 'EPA CompTox Dashboard' DTXSID3021720
ETZ UniChem DrugCentral 4417
ETZ UniChem BRENDA 10638
ETZ UniChem BRENDA 21393
ETZ UniChem BRENDA 49525
ETZ UniChem BRENDA 9470
ETZ UniChem DailyMed ETHER
ETZ UniChem ClinicalTrials ETHER
ETZ UniChem ClinicalTrials 'ETHYL ETHER'
ETZ UniChem rxnorm 'ETHYL ETHER'
ETZ UniChem 'Probes And Drugs' PD071800
ETZ UniChem eMolecules 485898
ETZ UniChem SureChEMBL SCHEMBL6
ETZ UniChem 'PubChem TPHARMA' 15146292
ETZ UniChem PubChem 3283
ETZ UniChem Mcule MCULE-5665709021
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
ETZ O1 0.084 0.340 0.699 ETKDGv3 1
ETZ C1 2.329 0.174 -0.108 ETKDGv3 2
ETZ C2 0.961 -0.487 -0.037 ETKDGv3 3
ETZ C3 -1.231 -0.185 0.675 ETKDGv3 4
ETZ C4 -2.054 0.503 -0.408 ETKDGv3 5
ETZ H1 3.028 -0.472 -0.680 ETKDGv3 6
ETZ H2 2.249 1.158 -0.616 ETKDGv3 7
ETZ H3 2.733 0.323 0.916 ETKDGv3 8
ETZ H4 1.074 -1.474 0.465 ETKDGv3 9
ETZ H5 0.593 -0.639 -1.077 ETKDGv3 10
ETZ H6 -1.272 -1.292 0.540 ETKDGv3 11
ETZ H7 -1.703 0.030 1.657 ETKDGv3 12
ETZ H8 -1.638 0.278 -1.411 ETKDGv3 13
ETZ H9 -3.103 0.139 -0.367 ETKDGv3 14
ETZ H10 -2.049 1.602 -0.249 ETKDGv3 15
#