data_EPH
#
_chem_comp.id EPH
_chem_comp.name L-ALPHA-PHOSPHATIDYL-BETA-OLEOYL-GAMMA-PALMITOYL-PHOSPHATIDYLETHANOLAMINE
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C39 H68 N O8 P"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2000-11-03
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 709.933
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code EPH
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1G2N
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
EPH C1 C1 C 0 1 N N N N N N 23.841 12.890 85.182 4.399 -1.006 -1.502 C1 EPH 1
EPH C2 C2 C 0 1 N N R N N N 23.073 13.779 86.051 3.659 -1.373 -2.790 C2 EPH 2
EPH C4 C4 C 0 1 N N N N N N 24.886 13.083 83.132 3.871 -0.575 0.819 C4 EPH 3
EPH O2 O2 O 0 1 N N N N N N 24.217 13.693 84.085 3.446 -0.891 -0.413 O2 EPH 4
EPH O4 O4 O 0 1 N N N N N N 25.161 11.929 83.164 5.047 -0.387 1.023 O4 EPH 5
EPH C18 C18 C 0 1 N N N N N N 25.252 14.041 81.968 2.882 -0.455 1.950 C18 EPH 6
EPH C19 C19 C 0 1 N N N N N N 24.699 13.559 80.620 3.622 -0.089 3.238 C19 EPH 7
EPH C20 C20 C 0 1 N N N N N N 23.182 13.560 80.559 2.618 0.032 4.386 C20 EPH 8
EPH C21 C21 C 0 1 N N N N N N 22.640 12.743 79.401 3.358 0.398 5.674 C21 EPH 9
EPH C22 C22 C 0 1 N N N N N N 21.119 12.883 79.293 2.353 0.520 6.822 C22 EPH 10
EPH C23 C23 C 0 1 N N N N N N 20.546 13.060 77.875 3.093 0.886 8.110 C23 EPH 11
EPH C24 C24 C 0 1 N N N N N N 21.052 14.303 77.128 2.104 1.006 9.241 C24 EPH 12
EPH C25 C25 C 0 1 N N N N N N 20.047 15.450 77.006 2.214 0.232 10.292 C25 EPH 13
EPH C26 C26 C 0 1 N N N N N N 20.672 16.773 77.458 1.225 0.352 11.423 C26 EPH 14
EPH C27 C27 C 0 1 N N N N N N 19.821 18.041 77.286 0.503 -0.983 11.612 C27 EPH 15
EPH C28 C28 C 0 1 N N N N N N 19.015 18.172 75.982 -0.485 -0.863 12.743 C28 EPH 16
EPH C29 C29 C 0 1 N N N N N N 19.851 18.299 74.721 -1.760 -1.067 12.522 C29 EPH 17
EPH C30 C30 C 0 1 N N N N N N 19.819 17.024 73.878 -2.749 -0.948 13.653 C30 EPH 18
EPH C31 C31 C 0 1 N N N N N N 19.435 17.261 72.416 -3.771 0.142 13.324 C31 EPH 19
EPH C32 C32 C 0 1 N N N N N N 17.931 17.461 72.213 -4.760 0.261 14.454 C32 EPH 20
EPH C33 C33 C 0 1 N N N N N N 17.082 16.203 72.363 -4.885 1.396 15.098 C33 EPH 21
EPH C34 C34 C 0 1 N N N N N N 15.598 16.513 72.532 -5.874 1.515 16.229 C34 EPH 22
EPH C37 C37 C 0 1 N N N N N N 22.843 13.134 87.373 4.663 -1.494 -3.938 C37 EPH 23
EPH O5 O5 O 0 1 N N N N N N 22.314 14.131 88.225 5.338 -0.247 -4.115 O5 EPH 24
EPH C3 C3 C 0 1 N N N N N N 21.512 15.311 85.249 1.561 -0.652 -3.759 C3 EPH 25
EPH O1 O1 O 0 1 N N N N N N 21.834 14.043 85.421 2.689 -0.338 -3.103 O1 EPH 26
EPH O3 O3 O 0 1 N N N N N N 22.232 16.224 85.540 1.352 -1.795 -4.089 O3 EPH 27
EPH C5 C5 C 0 1 N N N N N N 20.145 15.516 84.621 0.555 0.422 -4.083 C5 EPH 28
EPH C6 C6 C 0 1 N N N N N N 20.381 15.747 83.131 -0.629 -0.197 -4.827 C6 EPH 29
EPH C7 C7 C 0 1 N N N N N N 19.050 15.954 82.431 -1.651 0.893 -5.157 C7 EPH 30
EPH C8 C8 C 0 1 N N N N N N 19.043 15.729 80.934 -2.835 0.274 -5.901 C8 EPH 31
EPH C9 C9 C 0 1 N N N N N N 17.635 16.046 80.409 -3.857 1.364 -6.230 C9 EPH 32
EPH C10 C10 C 0 1 N N N N N N 17.066 15.186 79.282 -5.042 0.745 -6.974 C10 EPH 33
EPH C11 C11 C 0 1 N N N N N N 16.452 16.090 78.219 -6.063 1.836 -7.304 C11 EPH 34
EPH C12 C12 C 0 1 N N N N N N 15.149 15.634 77.518 -7.230 1.226 -8.037 C12 EPH 35
EPH C13 C13 C 0 1 N N N N N N 15.202 14.286 76.857 -8.436 1.306 -7.531 C13 EPH 36
EPH C14 C14 C 0 1 N N N N N N 14.860 14.426 75.388 -9.603 0.696 -8.264 C14 EPH 37
EPH C15 C15 C 0 1 N N N N N N 14.979 13.085 74.671 -10.249 -0.351 -7.395 C15 EPH 38
EPH C16 C16 C 0 1 N N N N N N 16.433 12.721 74.348 -11.506 -0.228 -7.046 C16 EPH 39
EPH C17 C17 C 0 1 N N N N N N 16.766 11.338 74.880 -12.152 -1.276 -6.177 C17 EPH 40
EPH C35 C35 C 0 1 N N N N N N 18.019 11.373 75.719 -12.645 -0.631 -4.881 C35 EPH 41
EPH C36 C36 C 0 1 N N N N N N 18.265 10.013 76.325 -13.302 -1.695 -3.999 C36 EPH 42
EPH P1 P1 P 0 1 N N R N N N 21.819 13.718 89.656 6.373 -0.447 -5.332 P1 EPH 43
EPH O6 O6 O 0 1 N N N N N N 21.544 14.920 90.565 7.418 -1.614 -4.962 O6 EPH 44
EPH O7 O7 O 0 1 N N N N N N 20.514 12.924 89.273 5.630 -0.820 -6.556 O7 EPH 45
EPH O8 O8 O 0 1 N N N N N N 22.842 12.726 90.206 7.172 0.927 -5.587 O8 EPH 46
EPH C38 C38 C 0 1 N N N N N N 22.754 11.363 89.777 8.070 0.687 -6.672 C38 EPH 47
EPH C39 C39 C 0 1 N N N N N N 24.107 10.706 89.590 8.865 1.960 -6.968 C39 EPH 48
EPH N1 N1 N 0 1 N N N N N N 23.753 9.296 89.733 9.631 2.348 -5.775 N1 EPH 49
EPH H11 1H1 H 0 1 N N N N N N 24.697 12.388 85.690 5.126 -1.783 -1.268 H11 EPH 50
EPH H12A 2H1 H 0 0 N N N N N N 23.300 11.957 84.896 4.913 -0.055 -1.637 H12A EPH 51
EPH H2 H2 H 0 1 N N N N N N 23.633 14.728 86.219 3.144 -2.324 -2.656 H2 EPH 52
EPH H181 1H18 H 0 0 N N N N N N 24.924 15.084 82.187 2.154 0.320 1.716 H181 EPH 53
EPH H182 2H18 H 0 0 N N N N N N 26.353 14.207 81.914 2.367 -1.407 2.085 H182 EPH 54
EPH H191 1H19 H 0 0 N N N N N N 25.129 14.152 79.780 4.350 -0.866 3.473 H191 EPH 55
EPH H192 2H19 H 0 0 N N N N N N 25.105 12.553 80.361 4.137 0.861 3.104 H192 EPH 56
EPH H201 1H20 H 0 0 N N N N N N 22.743 13.221 81.526 1.890 0.808 4.152 H201 EPH 57
EPH H202 2H20 H 0 0 N N N N N N 22.783 14.601 80.534 2.103 -0.919 4.521 H202 EPH 58
EPH H211 1H21 H 0 0 N N N N N N 23.145 13.003 78.442 4.085 -0.378 5.909 H211 EPH 59
EPH H212 2H21 H 0 0 N N N N N N 22.950 11.674 79.471 3.872 1.349 5.540 H212 EPH 60
EPH H221 1H22 H 0 0 N N N N N N 20.625 12.016 79.791 1.626 1.296 6.588 H221 EPH 61
EPH H222 2H22 H 0 0 N N N N N N 20.771 13.717 79.945 1.839 -0.431 6.957 H222 EPH 62
EPH H231 1H23 H 0 0 N N N N N N 20.727 12.143 77.267 3.821 0.109 8.345 H231 EPH 63
EPH H232 2H23 H 0 0 N N N N N N 19.431 13.053 77.904 3.608 1.837 7.976 H232 EPH 64
EPH H24 H24 H 0 1 N N N N N N 22.069 14.367 76.707 1.304 1.729 9.185 H24 EPH 65
EPH H25 H25 H 0 1 N N N N N N 19.012 15.338 76.641 3.014 -0.491 10.349 H25 EPH 66
EPH H261 1H26 H 0 0 N N N N N N 20.999 16.686 78.520 1.752 0.613 12.341 H261 EPH 67
EPH H262 2H26 H 0 0 N N N N N N 21.654 16.912 76.950 0.498 1.128 11.188 H262 EPH 68
EPH H271 1H27 H 0 0 N N N N N N 19.135 18.149 78.158 -0.023 -1.244 10.694 H271 EPH 69
EPH H272 2H27 H 0 0 N N N N N N 20.465 18.941 77.416 1.231 -1.760 11.847 H272 EPH 70
EPH H28 H28 H 0 1 N N N N N N 17.912 18.174 75.953 -0.143 -0.609 13.735 H28 EPH 71
EPH H29 H29 H 0 1 N N N N N N 20.413 19.208 74.450 -2.103 -1.322 11.530 H29 EPH 72
EPH H301 1H30 H 0 0 N N N N N N 20.791 16.483 73.946 -3.264 -1.899 13.788 H301 EPH 73
EPH H302 2H30 H 0 0 N N N N N N 19.149 16.262 74.341 -2.222 -0.687 14.570 H302 EPH 74
EPH H311 1H31 H 0 0 N N N N N N 20.010 18.114 71.988 -3.256 1.093 13.189 H311 EPH 75
EPH H312 2H31 H 0 0 N N N N N N 19.817 16.438 71.767 -4.298 -0.118 12.406 H312 EPH 76
EPH H32 H32 H 0 1 N N N N N N 17.489 18.443 71.975 -5.366 -0.587 14.734 H32 EPH 77
EPH H33 H33 H 0 1 N N N N N N 17.496 15.180 72.350 -4.279 2.245 14.818 H33 EPH 78
EPH H341 1H34 H 0 0 N N N N N N 14.977 15.593 72.641 -5.836 2.524 16.639 H341 EPH 79
EPH H342 2H34 H 0 0 N N N N N N 15.429 17.213 73.383 -6.878 1.312 15.856 H342 EPH 80
EPH H343 3H34 H 0 0 N N N N N N 15.224 17.150 71.697 -5.623 0.796 17.008 H343 EPH 81
EPH H371 1H37 H 0 0 N N N N N N 22.203 12.222 87.312 5.391 -2.271 -3.704 H371 EPH 82
EPH H372 2H37 H 0 0 N N N N N N 23.753 12.639 87.785 4.136 -1.755 -4.856 H372 EPH 83
EPH H51 1H5 H 0 1 N N N N N N 19.433 14.683 84.831 1.022 1.180 -4.711 H51 EPH 84
EPH H52 2H5 H 0 1 N N N N N N 19.554 16.328 85.105 0.203 0.881 -3.159 H52 EPH 85
EPH H61 1H6 H 0 1 N N N N N N 21.090 16.586 82.942 -1.097 -0.955 -4.199 H61 EPH 86
EPH H62 2H6 H 0 1 N N N N N N 20.977 14.926 82.667 -0.278 -0.656 -5.751 H62 EPH 87
EPH H71 1H7 H 0 1 N N N N N N 18.267 15.321 82.911 -1.183 1.651 -5.785 H71 EPH 88
EPH H72 2H7 H 0 1 N N N N N N 18.655 16.971 82.662 -2.002 1.353 -4.233 H72 EPH 89
EPH H81 1H8 H 0 1 N N N N N N 19.838 16.307 80.408 -3.303 -0.483 -5.273 H81 EPH 90
EPH H82 2H8 H 0 1 N N N N N N 19.387 14.707 80.650 -2.484 -0.185 -6.825 H82 EPH 91
EPH H91 1H9 H 0 1 N N N N N N 16.920 16.041 81.264 -3.389 2.123 -6.858 H91 EPH 92
EPH H92 2H9 H 0 1 N N N N N N 17.595 17.117 80.102 -4.208 1.824 -5.306 H92 EPH 93
EPH H101 1H10 H 0 0 N N N N N N 17.826 14.489 78.856 -5.509 -0.012 -6.346 H101 EPH 94
EPH H102 2H10 H 0 0 N N N N N N 16.344 14.422 79.656 -4.690 0.286 -7.898 H102 EPH 95
EPH H111 1H11 H 0 0 N N N N N N 16.291 17.103 78.655 -5.596 2.594 -7.932 H111 EPH 96
EPH H112 2H11 H 0 0 N N N N N N 17.221 16.309 77.442 -6.414 2.295 -6.380 H112 EPH 97
EPH H12 H12 H 0 1 N N N N N N 14.227 16.240 77.490 -7.073 0.723 -8.979 H12 EPH 98
EPH H13 H13 H 0 1 N N N N N N 15.452 13.342 77.369 -8.593 1.809 -6.588 H13 EPH 99
EPH H141 1H14 H 0 0 N N N N N N 13.853 14.883 75.241 -9.251 0.237 -9.188 H141 EPH 100
EPH H142 2H14 H 0 0 N N N N N N 15.477 15.212 74.894 -10.331 1.473 -8.498 H142 EPH 101
EPH H15 H15 H 0 1 N N N N N N 14.113 12.451 74.415 -9.677 -1.204 -7.061 H15 EPH 102
EPH H16 H16 H 0 1 N N N N N N 17.143 13.367 73.805 -12.078 0.624 -7.380 H16 EPH 103
EPH H171 1H17 H 0 0 N N N N N N 15.908 10.893 75.437 -11.425 -2.053 -5.943 H171 EPH 104
EPH H172 2H17 H 0 0 N N N N N N 16.840 10.587 74.058 -12.996 -1.717 -6.708 H172 EPH 105
EPH H351 1H35 H 0 0 N N N N N N 18.899 11.741 75.142 -13.373 0.145 -5.115 H351 EPH 106
EPH H352 2H35 H 0 0 N N N N N N 17.984 12.176 76.491 -11.801 -0.190 -4.350 H352 EPH 107
EPH H361 1H36 H 0 0 N N N N N N 19.191 10.038 76.945 -13.653 -1.236 -3.075 H361 EPH 108
EPH H362 2H36 H 0 0 N N N N N N 17.384 9.644 76.901 -14.146 -2.136 -4.529 H362 EPH 109
EPH H363 3H36 H 0 0 N N N N N N 18.299 9.209 75.552 -12.574 -2.472 -3.764 H363 EPH 110
EPH HO6 HO6 H 0 1 N N N N N N 21.244 14.670 91.431 7.880 -1.332 -4.160 HO6 EPH 111
EPH H381 1H38 H 0 0 N N N N N N 22.117 10.768 90.473 8.757 -0.115 -6.405 H381 EPH 112
EPH H382 2H38 H 0 0 N N N N N N 22.140 11.278 88.849 7.502 0.400 -7.557 H382 EPH 113
EPH H391 1H39 H 0 0 N N N N N N 24.643 10.972 88.649 9.550 1.777 -7.796 H391 EPH 114
EPH H392 2H39 H 0 0 N N N N N N 24.914 11.068 90.268 8.178 2.763 -7.235 H392 EPH 115
EPH HN11 1HN1 H 0 0 N N N N N N 24.663 8.853 89.607 10.136 3.187 -6.015 HN11 EPH 116
EPH HN12 2HN1 H 0 0 N N N N N N 23.014 8.964 89.112 8.957 2.606 -5.070 HN12 EPH 117
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
EPH C1 C2 SING N N 1
EPH C1 O2 SING N N 2
EPH C1 H11 SING N N 3
EPH C1 H12A SING N N 4
EPH C2 C37 SING N N 5
EPH C2 O1 SING N N 6
EPH C2 H2 SING N N 7
EPH C4 O2 SING N N 8
EPH C4 O4 DOUB N N 9
EPH C4 C18 SING N N 10
EPH C18 C19 SING N N 11
EPH C18 H181 SING N N 12
EPH C18 H182 SING N N 13
EPH C19 C20 SING N N 14
EPH C19 H191 SING N N 15
EPH C19 H192 SING N N 16
EPH C20 C21 SING N N 17
EPH C20 H201 SING N N 18
EPH C20 H202 SING N N 19
EPH C21 C22 SING N N 20
EPH C21 H211 SING N N 21
EPH C21 H212 SING N N 22
EPH C22 C23 SING N N 23
EPH C22 H221 SING N N 24
EPH C22 H222 SING N N 25
EPH C23 C24 SING N N 26
EPH C23 H231 SING N N 27
EPH C23 H232 SING N N 28
EPH C24 C25 DOUB N E 29
EPH C24 H24 SING N N 30
EPH C25 C26 SING N N 31
EPH C25 H25 SING N N 32
EPH C26 C27 SING N N 33
EPH C26 H261 SING N N 34
EPH C26 H262 SING N N 35
EPH C27 C28 SING N N 36
EPH C27 H271 SING N N 37
EPH C27 H272 SING N N 38
EPH C28 C29 DOUB N E 39
EPH C28 H28 SING N N 40
EPH C29 C30 SING N N 41
EPH C29 H29 SING N N 42
EPH C30 C31 SING N N 43
EPH C30 H301 SING N N 44
EPH C30 H302 SING N N 45
EPH C31 C32 SING N N 46
EPH C31 H311 SING N N 47
EPH C31 H312 SING N N 48
EPH C32 C33 DOUB N E 49
EPH C32 H32 SING N N 50
EPH C33 C34 SING N N 51
EPH C33 H33 SING N N 52
EPH C34 H341 SING N N 53
EPH C34 H342 SING N N 54
EPH C34 H343 SING N N 55
EPH C37 O5 SING N N 56
EPH C37 H371 SING N N 57
EPH C37 H372 SING N N 58
EPH O5 P1 SING N N 59
EPH C3 O1 SING N N 60
EPH C3 O3 DOUB N N 61
EPH C3 C5 SING N N 62
EPH C5 C6 SING N N 63
EPH C5 H51 SING N N 64
EPH C5 H52 SING N N 65
EPH C6 C7 SING N N 66
EPH C6 H61 SING N N 67
EPH C6 H62 SING N N 68
EPH C7 C8 SING N N 69
EPH C7 H71 SING N N 70
EPH C7 H72 SING N N 71
EPH C8 C9 SING N N 72
EPH C8 H81 SING N N 73
EPH C8 H82 SING N N 74
EPH C9 C10 SING N N 75
EPH C9 H91 SING N N 76
EPH C9 H92 SING N N 77
EPH C10 C11 SING N N 78
EPH C10 H101 SING N N 79
EPH C10 H102 SING N N 80
EPH C11 C12 SING N N 81
EPH C11 H111 SING N N 82
EPH C11 H112 SING N N 83
EPH C12 C13 DOUB N E 84
EPH C12 H12 SING N N 85
EPH C13 C14 SING N N 86
EPH C13 H13 SING N N 87
EPH C14 C15 SING N N 88
EPH C14 H141 SING N N 89
EPH C14 H142 SING N N 90
EPH C15 C16 DOUB N E 91
EPH C15 H15 SING N N 92
EPH C16 C17 SING N N 93
EPH C16 H16 SING N N 94
EPH C17 C35 SING N N 95
EPH C17 H171 SING N N 96
EPH C17 H172 SING N N 97
EPH C35 C36 SING N N 98
EPH C35 H351 SING N N 99
EPH C35 H352 SING N N 100
EPH C36 H361 SING N N 101
EPH C36 H362 SING N N 102
EPH C36 H363 SING N N 103
EPH P1 O6 SING N N 104
EPH P1 O7 DOUB N N 105
EPH P1 O8 SING N N 106
EPH O6 HO6 SING N N 107
EPH O8 C38 SING N N 108
EPH C38 C39 SING N N 109
EPH C38 H381 SING N N 110
EPH C38 H382 SING N N 111
EPH C39 N1 SING N N 112
EPH C39 H391 SING N N 113
EPH C39 H392 SING N N 114
EPH N1 HN11 SING N N 115
EPH N1 HN12 SING N N 116
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
EPH SMILES ACDLabs 10.04 O=C(OCC(OC(=O)CCCCCCC/C=C/C/C=C/CCC)COP(=O)(OCCN)O)CCCCCC/C=C/CC/C=C/CC/C=C/C
EPH SMILES_CANONICAL CACTVS 3.341 CCC/C=C/C/C=C/CCCCCCCC(=O)O[C@H](COC(=O)CCCCCC\C=C\CC\C=C\CC\C=C\C)CO[P@@](O)(=O)OCCN
EPH SMILES CACTVS 3.341 CCCC=CCC=CCCCCCCCC(=O)O[CH](COC(=O)CCCCCCC=CCCC=CCCC=CC)CO[P](O)(=O)OCCN
EPH SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 CCCC=CCC=CCCCCCCCC(=O)O[C@H](COC(=O)CCCCCCC=CCCC=CCCC=CC)CO[P@](=O)(O)OCCN
EPH SMILES "OpenEye OEToolkits" 1.5.0 CCCC=CCC=CCCCCCCCC(=O)OC(COC(=O)CCCCCCC=CCCC=CCCC=CC)COP(=O)(O)OCCN
EPH InChI InChI 1.03 InChI=1S/C39H68NO8P/c1-3-5-7-9-11-13-15-17-18-20-21-23-25-27-29-31-38(41)45-35-37(36-47-49(43,44)46-34-33-40)48-39(42)32-30-28-26-24-22-19-16-14-12-10-8-6-4-2/h3,5,8,10-11,13-14,16,18,20,37H,4,6-7,9,12,15,17,19,21-36,40H2,1-2H3,(H,43,44)/b5-3+,10-8+,13-11?,16-14+,20-18+/t37-/m1/s1
EPH InChIKey InChI 1.03 MABRTXOVHMDVAT-AAEGOEIASA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
EPH "SYSTEMATIC NAME" ACDLabs 10.04 "(2R)-3-{[(R)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-[(9E,12E)-hexadeca-9,12-dienoyloxy]propyl (8E,12E,16E)-octadeca-8,12,16-trienoate"
EPH "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R)-3-(2-aminoethoxy-hydroxy-phosphoryl)oxy-2-hexadeca-9,12-dienoyloxy-propyl] octadeca-8,12,16-trienoate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
EPH 'Create component' 2000-11-03 RCSB
EPH 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id EPH
_pdbe_chem_comp_drugbank_details.drugbank_id DB03047
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name L-Alpha-Phosphatidyl-Beta-Oleoyl-Gamma-Palmitoyl-Phosphatidylethanolamine
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number ?
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_synonyms.comp_id EPH
_pdbe_chem_comp_synonyms.name L-Alpha-Phosphatidyl-Beta-Oleoyl-Gamma-Palmitoyl-Phosphatidylethanolamine
_pdbe_chem_comp_synonyms.provenance DrugBank
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
EPH C1 C 12.899 -8.726 1
EPH C2 C 12.899 -10.226 2
EPH C4 C 14.198 -6.476 3
EPH O2 O 14.198 -7.976 4
EPH O4 O 12.899 -5.726 5
EPH C18 C 15.497 -5.726 6
EPH C19 C 15.497 -4.226 7
EPH C20 C 16.796 -3.475 8
EPH C21 C 16.796 -1.976 9
EPH C22 C 18.095 -1.226 10
EPH C23 C 18.095 0.275 11
EPH C24 C 19.394 1.024 12
EPH C25 C 19.394 2.525 13
EPH C26 C 20.693 3.275 14
EPH C27 C 20.693 4.774 15
EPH C28 C 21.992 5.524 16
EPH C29 C 21.992 7.024 17
EPH C30 C 23.291 7.774 18
EPH C31 C 23.291 9.274 19
EPH C32 C 24.590 10.024 20
EPH C33 C 24.590 11.524 21
EPH C34 C 25.889 12.274 22
EPH C37 C 11.600 -10.976 23
EPH O5 O 10.301 -10.226 24
EPH C3 C 15.497 -10.226 25
EPH O1 O 14.198 -10.976 26
EPH O3 O 15.497 -8.726 27
EPH C5 C 16.796 -10.976 28
EPH C6 C 18.095 -10.226 29
EPH C7 C 19.394 -10.976 30
EPH C8 C 20.693 -10.226 31
EPH C9 C 21.992 -10.976 32
EPH C10 C 23.291 -10.226 33
EPH C11 C 24.590 -10.976 34
EPH C12 C 25.889 -10.226 35
EPH C13 C 27.188 -10.976 36
EPH C14 C 28.487 -10.226 37
EPH C15 C 29.786 -10.976 38
EPH C16 C 31.085 -10.226 39
EPH C17 C 32.384 -10.976 40
EPH C35 C 33.683 -10.226 41
EPH C36 C 34.982 -10.976 42
EPH P1 P 9.002 -10.976 43
EPH O6 O 8.252 -9.677 44
EPH O7 O 9.752 -12.274 45
EPH O8 O 7.702 -11.726 46
EPH C38 C 6.404 -10.976 47
EPH C39 C 5.104 -11.726 48
EPH N1 N 3.805 -10.976 49
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
EPH C2 C1 SINGLE BEGINWEDGE 1
EPH C1 O2 SINGLE NONE 2
EPH C2 C37 SINGLE NONE 3
EPH C2 O1 SINGLE NONE 4
EPH C4 O2 SINGLE NONE 5
EPH C4 O4 DOUBLE NONE 6
EPH C4 C18 SINGLE NONE 7
EPH C18 C19 SINGLE NONE 8
EPH C19 C20 SINGLE NONE 9
EPH C20 C21 SINGLE NONE 10
EPH C21 C22 SINGLE NONE 11
EPH C22 C23 SINGLE NONE 12
EPH C23 C24 SINGLE ENDUPRIGHT 13
EPH C24 C25 DOUBLE NONE 14
EPH C25 C26 SINGLE ENDUPRIGHT 15
EPH C26 C27 SINGLE NONE 16
EPH C27 C28 SINGLE ENDUPRIGHT 17
EPH C28 C29 DOUBLE NONE 18
EPH C29 C30 SINGLE ENDUPRIGHT 19
EPH C30 C31 SINGLE NONE 20
EPH C31 C32 SINGLE ENDUPRIGHT 21
EPH C32 C33 DOUBLE NONE 22
EPH C33 C34 SINGLE ENDUPRIGHT 23
EPH C37 O5 SINGLE NONE 24
EPH O5 P1 SINGLE NONE 25
EPH C3 O1 SINGLE NONE 26
EPH C3 O3 DOUBLE NONE 27
EPH C3 C5 SINGLE NONE 28
EPH C5 C6 SINGLE NONE 29
EPH C6 C7 SINGLE NONE 30
EPH C7 C8 SINGLE NONE 31
EPH C8 C9 SINGLE NONE 32
EPH C9 C10 SINGLE NONE 33
EPH C10 C11 SINGLE NONE 34
EPH C11 C12 SINGLE ENDUPRIGHT 35
EPH C12 C13 DOUBLE NONE 36
EPH C13 C14 SINGLE ENDUPRIGHT 37
EPH C14 C15 SINGLE ENDUPRIGHT 38
EPH C15 C16 DOUBLE NONE 39
EPH C16 C17 SINGLE ENDUPRIGHT 40
EPH C17 C35 SINGLE NONE 41
EPH C35 C36 SINGLE NONE 42
EPH P1 O6 SINGLE BEGINDASH 43
EPH P1 O7 DOUBLE NONE 44
EPH P1 O8 SINGLE NONE 45
EPH O8 C38 SINGLE NONE 46
EPH C38 C39 SINGLE NONE 47
EPH C39 N1 SINGLE NONE 48
#
_pdbe_chem_comp_substructure.comp_id EPH
_pdbe_chem_comp_substructure.substructure_name phosphate
_pdbe_chem_comp_substructure.id F1
_pdbe_chem_comp_substructure.substructure_type fragment
_pdbe_chem_comp_substructure.substructure_smiles O=P(O)(O)O
_pdbe_chem_comp_substructure.substructure_inchis InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4)
_pdbe_chem_comp_substructure.substructure_inchikeys NBIIXXVUZAFLBC-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
EPH O5 F1 1
EPH P1 F1 1
EPH O7 F1 1
EPH O6 F1 1
EPH O8 F1 1
#
_pdbe_chem_comp_rdkit_properties.comp_id EPH
_pdbe_chem_comp_rdkit_properties.exactmw 709.468
_pdbe_chem_comp_rdkit_properties.amw 709.946
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 38
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 9
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 49
_pdbe_chem_comp_rdkit_properties.NumAtoms 117
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 10
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.692
_pdbe_chem_comp_rdkit_properties.NumRings 0
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 393.361
_pdbe_chem_comp_rdkit_properties.tpsa 134.380
_pdbe_chem_comp_rdkit_properties.CrippenClogP 10.156
_pdbe_chem_comp_rdkit_properties.CrippenMR 201.011
_pdbe_chem_comp_rdkit_properties.chi0v 24.555
_pdbe_chem_comp_rdkit_properties.chi1v 12.797
_pdbe_chem_comp_rdkit_properties.chi2v 3.468
_pdbe_chem_comp_rdkit_properties.chi3v 3.468
_pdbe_chem_comp_rdkit_properties.chi4v 1.790
_pdbe_chem_comp_rdkit_properties.chi0n 91.660
_pdbe_chem_comp_rdkit_properties.chi1n 45.140
_pdbe_chem_comp_rdkit_properties.chi2n 2.839
_pdbe_chem_comp_rdkit_properties.chi3n 2.839
_pdbe_chem_comp_rdkit_properties.chi4n 1.406
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.290
_pdbe_chem_comp_rdkit_properties.kappa1 7.548
_pdbe_chem_comp_rdkit_properties.kappa2 35.533
_pdbe_chem_comp_rdkit_properties.kappa3 35.342
_pdbe_chem_comp_rdkit_properties.Phi 5.474
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
EPH UniChem DrugBank DB03047
EPH UniChem PubChem 168313614
EPH UniChem 'Probes And Drugs' PD059870
#