data_E4F
#
_chem_comp.id E4F
_chem_comp.name
"5-[[(1R,2S)-2-(5-azanylpentanoylamino)-2,3-dihydro-1H-inden-1-yl]methyl]-1,3-benzodioxole-4-carboxylic acid"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C23 H26 N2 O5"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2013-12-19
_chem_comp.pdbx_modified_date 2014-09-05
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 410.463
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code E4F
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4CJ3
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
E4F C1 C1 C 0 1 Y N N N N N 30.985 -27.627 -1.049 2.144 4.708 -0.036 C1 E4F 1
E4F C2 C2 C 0 1 Y N N N N N 30.901 -28.503 -0.011 2.963 3.656 -0.399 C2 E4F 2
E4F C3 C3 C 0 1 Y N N N N N 32.090 -27.680 -1.839 0.792 4.497 0.154 C3 E4F 3
E4F C4 C4 C 0 1 Y N N N N N 31.886 -29.415 0.256 2.427 2.395 -0.576 C4 E4F 4
E4F C5 C5 C 0 1 Y N N N N N 33.148 -32.174 1.417 2.778 0.224 1.614 C5 E4F 5
E4F C6 C6 C 0 1 Y N N N N N 32.447 -32.907 2.336 4.099 -0.188 1.680 C6 E4F 6
E4F C7 C7 C 0 1 Y N N N N N 32.702 -33.753 -0.291 2.318 -1.499 0.002 C7 E4F 7
E4F C8 C8 C 0 1 Y N N N N N 33.077 -28.581 -1.580 0.254 3.233 -0.019 C8 E4F 8
E4F C9 C9 C 0 1 Y N N N N N 32.989 -29.454 -0.552 1.072 2.182 -0.393 C9 E4F 9
E4F C10 C10 C 0 1 Y N N N N N 33.284 -32.572 0.114 1.888 -0.422 0.784 C10 E4F 10
E4F C11 C11 C 0 1 Y N N N N N 31.884 -34.057 1.899 4.542 -1.249 0.908 C11 E4F 11
E4F C12 C12 C 0 1 Y N N N N N 31.991 -34.484 0.627 3.655 -1.908 0.060 C12 E4F 12
E4F C13 C13 C 0 1 N N N N N N 32.804 -34.255 -1.680 1.369 -2.192 -0.888 C13 E4F 13
E4F C14 C14 C 0 1 N N N N N N 37.418 -30.308 -1.335 -3.420 0.426 -0.248 C14 E4F 14
E4F C15 C15 C 0 1 N N N N N N 34.324 -28.759 -2.331 -1.171 2.745 0.125 C15 E4F 15
E4F C16 C16 C 0 1 N N N N N N 30.610 -35.681 1.623 5.722 -2.589 -0.431 C16 E4F 16
E4F C17 C17 C 0 1 N N R N N N 34.188 -30.320 -0.438 0.253 0.915 -0.515 C17 E4F 17
E4F C18 C18 C 0 1 N N S N N N 35.134 -29.489 -1.301 -1.211 1.388 -0.610 C18 E4F 18
E4F C19 C19 C 0 1 N N N N N N 34.051 -31.761 -0.851 0.453 0.032 0.719 C19 E4F 19
E4F C20 C20 C 0 1 N N N N N N 38.196 -31.164 -2.281 -4.346 -0.535 0.451 C20 E4F 20
E4F C21 C21 C 0 1 N N N N N N 37.191 -31.804 -3.241 -5.766 -0.363 -0.092 C21 E4F 21
E4F C22 C22 C 0 1 N N N N N N 37.717 -32.915 -4.142 -6.705 -1.339 0.618 C22 E4F 22
E4F C23 C23 C 0 1 N N N N N N 37.324 -32.638 -5.576 -8.125 -1.167 0.075 C23 E4F 23
E4F N25 N1 N 0 1 N N N N N N 36.203 -30.166 -1.900 -2.111 0.454 0.070 N25 E4F 24
E4F N24 N2 N 0 1 N N N N N N 36.893 -33.817 -6.359 -9.028 -2.105 0.757 N24 E4F 25
E4F O30 O1 O 0 1 N N N N N N 31.841 -34.791 -2.197 0.582 -3.172 -0.401 O30 E4F 26
E4F O26 O2 O 0 1 N N N N N N 33.898 -34.110 -2.234 1.296 -1.881 -2.060 O26 E4F 27
E4F O27 O3 O 0 1 N N N N N N 37.837 -29.864 -0.274 -3.853 1.176 -1.098 O27 E4F 28
E4F O28 O4 O 0 1 N N N N N N 31.163 -34.869 2.619 5.770 -1.834 0.794 O28 E4F 29
E4F O29 O5 O 0 1 N N N N N N 31.327 -35.649 0.430 4.325 -2.905 -0.582 O29 E4F 30
E4F H1 H1 H 0 1 N N N N N N 30.198 -26.912 -1.239 2.562 5.695 0.104 H1 E4F 31
E4F H2 H2 H 0 1 N N N N N N 30.027 -28.478 0.624 4.021 3.819 -0.543 H2 E4F 32
E4F H3 H3 H 0 1 N N N N N N 32.185 -27.004 -2.676 0.153 5.319 0.438 H3 E4F 33
E4F H4 H4 H 0 1 N N N N N N 31.794 -30.093 1.091 3.068 1.573 -0.860 H4 E4F 34
E4F H5 H5 H 0 1 N N N N N N 33.610 -31.249 1.731 2.443 1.052 2.220 H5 E4F 35
E4F H6 H6 H 0 1 N N N N N N 32.348 -32.583 3.361 4.788 0.322 2.338 H6 E4F 36
E4F H7 H7 H 0 1 N N N N N N 34.174 -29.363 -3.238 -1.421 2.613 1.177 H7 E4F 37
E4F H8 H8 H 0 1 N N N N N N 34.780 -27.796 -2.603 -1.861 3.449 -0.343 H8 E4F 38
E4F H9 H9 H 0 1 N N N N N N 29.583 -35.340 1.423 6.074 -1.985 -1.268 H9 E4F 39
E4F H10 H10 H 0 1 N N N N N N 30.587 -36.718 1.990 6.314 -3.500 -0.343 H10 E4F 40
E4F H11 H11 H 0 1 N N N N N N 34.551 -30.287 0.600 0.530 0.371 -1.418 H11 E4F 41
E4F H12 H12 H 0 1 N N N N N N 35.557 -28.721 -0.637 -1.503 1.520 -1.652 H12 E4F 42
E4F H13 H13 H 0 1 N N N N N N 33.539 -31.799 -1.824 -0.201 -0.838 0.653 H13 E4F 43
E4F H14 H14 H 0 1 N N N N N N 35.058 -32.194 -0.949 0.211 0.601 1.616 H14 E4F 44
E4F H15 H15 H 0 1 N N N N N N 38.737 -31.945 -1.726 -4.010 -1.557 0.274 H15 E4F 45
E4F H16 H16 H 0 1 N N N N N N 38.915 -30.549 -2.842 -4.339 -0.332 1.522 H16 E4F 46
E4F H17 H17 H 0 1 N N N N N N 36.796 -31.008 -3.889 -6.101 0.659 0.086 H17 E4F 47
E4F H18 H18 H 0 1 N N N N N N 36.374 -32.224 -2.636 -5.772 -0.567 -1.163 H18 E4F 48
E4F H19 H19 H 0 1 N N N N N N 37.288 -33.877 -3.825 -6.370 -2.361 0.441 H19 E4F 49
E4F H20 H20 H 0 1 N N N N N N 38.813 -32.959 -4.065 -6.699 -1.136 1.689 H20 E4F 50
E4F H21 H21 H 0 1 N N N N N N 38.191 -32.192 -6.085 -8.461 -0.145 0.252 H21 E4F 51
E4F H22 H22 H 0 1 N N N N N N 36.494 -31.916 -5.566 -8.132 -1.371 -0.996 H22 E4F 52
E4F H23 H23 H 0 1 N N N N N N 36.056 -30.569 -2.803 -1.764 -0.146 0.750 H23 E4F 53
E4F H24 H24 H 0 1 N N N N N N 36.656 -33.532 -7.288 -8.991 -1.979 1.758 H24 E4F 54
E4F H25 H25 H 0 1 N N N N N N 37.638 -34.484 -6.395 -9.972 -2.010 0.415 H25 E4F 55
E4F H27 H27 H 0 1 N N N N N N 32.068 -35.071 -3.076 0.029 -3.648 -1.037 H27 E4F 56
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
E4F N24 C23 SING N N 1
E4F C23 C22 SING N N 2
E4F C22 C21 SING N N 3
E4F C21 C20 SING N N 4
E4F C15 C8 SING N N 5
E4F C15 C18 SING N N 6
E4F C20 C14 SING N N 7
E4F O26 C13 DOUB N N 8
E4F O30 C13 SING N N 9
E4F N25 C14 SING N N 10
E4F N25 C18 SING N N 11
E4F C3 C8 DOUB Y N 12
E4F C3 C1 SING Y N 13
E4F C13 C7 SING N N 14
E4F C8 C9 SING Y N 15
E4F C14 O27 DOUB N N 16
E4F C18 C17 SING N N 17
E4F C1 C2 DOUB Y N 18
E4F C19 C17 SING N N 19
E4F C19 C10 SING N N 20
E4F C9 C17 SING N N 21
E4F C9 C4 DOUB Y N 22
E4F C7 C10 DOUB Y N 23
E4F C7 C12 SING Y N 24
E4F C2 C4 SING Y N 25
E4F C10 C5 SING Y N 26
E4F O29 C12 SING N N 27
E4F O29 C16 SING N N 28
E4F C12 C11 DOUB Y N 29
E4F C5 C6 DOUB Y N 30
E4F C16 O28 SING N N 31
E4F C11 C6 SING Y N 32
E4F C11 O28 SING N N 33
E4F C1 H1 SING N N 34
E4F C2 H2 SING N N 35
E4F C3 H3 SING N N 36
E4F C4 H4 SING N N 37
E4F C5 H5 SING N N 38
E4F C6 H6 SING N N 39
E4F C15 H7 SING N N 40
E4F C15 H8 SING N N 41
E4F C16 H9 SING N N 42
E4F C16 H10 SING N N 43
E4F C17 H11 SING N N 44
E4F C18 H12 SING N N 45
E4F C19 H13 SING N N 46
E4F C19 H14 SING N N 47
E4F C20 H15 SING N N 48
E4F C20 H16 SING N N 49
E4F C21 H17 SING N N 50
E4F C21 H18 SING N N 51
E4F C22 H19 SING N N 52
E4F C22 H20 SING N N 53
E4F C23 H21 SING N N 54
E4F C23 H22 SING N N 55
E4F N25 H23 SING N N 56
E4F N24 H24 SING N N 57
E4F N24 H25 SING N N 58
E4F O30 H27 SING N N 59
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
E4F SMILES ACDLabs 12.01 O=C(NC2Cc1ccccc1C2Cc3ccc4OCOc4c3C(=O)O)CCCCN
E4F InChI InChI 1.03 InChI=1S/C23H26N2O5/c24-10-4-3-7-20(26)25-18-12-14-5-1-2-6-16(14)17(18)11-15-8-9-19-22(30-13-29-19)21(15)23(27)28/h1-2,5-6,8-9,17-18H,3-4,7,10-13,24H2,(H,25,26)(H,27,28)/t17-,18+/m1/s1
E4F InChIKey InChI 1.03 OWTQVNFBKGWMJL-MSOLQXFVSA-N
E4F SMILES_CANONICAL CACTVS 3.385 NCCCCC(=O)N[C@H]1Cc2ccccc2[C@H]1Cc3ccc4OCOc4c3C(O)=O
E4F SMILES CACTVS 3.385 NCCCCC(=O)N[CH]1Cc2ccccc2[CH]1Cc3ccc4OCOc4c3C(O)=O
E4F SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 c1ccc2c(c1)C[C@@H]([C@@H]2Cc3ccc4c(c3C(=O)O)OCO4)NC(=O)CCCCN
E4F SMILES "OpenEye OEToolkits" 1.9.2 c1ccc2c(c1)CC(C2Cc3ccc4c(c3C(=O)O)OCO4)NC(=O)CCCCN
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
E4F "SYSTEMATIC NAME" ACDLabs 12.01 "5-({(1R,2S)-2-[(5-aminopentanoyl)amino]-2,3-dihydro-1H-inden-1-yl}methyl)-1,3-benzodioxole-4-carboxylic acid"
E4F "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "5-[[(1R,2S)-2-(5-azanylpentanoylamino)-2,3-dihydro-1H-inden-1-yl]methyl]-1,3-benzodioxole-4-carboxylic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
E4F 'Create component' 2013-12-19 EBI
E4F 'Initial release' 2014-01-08 RCSB
E4F 'Modify descriptor' 2014-09-05 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
E4F C1 C 3.000 -2.200 1
E4F C2 C 3.000 -0.700 2
E4F C3 C 4.299 -2.950 3
E4F C4 C 4.299 0.050 4
E4F C5 C 9.953 0.376 5
E4F C6 C 11.421 0.685 6
E4F C7 C 9.417 2.918 7
E4F C8 C 5.598 -2.200 8
E4F C9 C 5.598 -0.700 9
E4F C10 C 8.951 1.492 10
E4F C11 C 11.887 2.111 11
E4F C12 C 10.885 3.227 12
E4F C13 C 8.415 4.035 13
E4F C14 C 10.143 -2.749 14
E4F C15 C 7.018 -2.657 15
E4F C16 C 13.094 4.202 16
E4F C17 C 7.018 -0.243 17
E4F C18 C 7.893 -1.450 18
E4F C19 C 7.483 1.183 19
E4F C20 C 11.643 -2.749 20
E4F C21 C 12.393 -4.048 21
E4F C22 C 13.893 -4.048 22
E4F C23 C 14.643 -5.347 23
E4F N25 N 9.393 -1.450 24
E4F N24 N 16.143 -5.347 25
E4F O30 O 6.948 3.725 26
E4F O26 O 8.881 5.460 27
E4F O27 O 9.393 -4.048 28
E4F O28 O 13.248 2.719 29
E4F O29 O 11.636 4.515 30
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
E4F N24 C23 SINGLE NONE 1
E4F C23 C22 SINGLE NONE 2
E4F C22 C21 SINGLE NONE 3
E4F C21 C20 SINGLE NONE 4
E4F C15 C8 SINGLE NONE 5
E4F C15 C18 SINGLE NONE 6
E4F C20 C14 SINGLE NONE 7
E4F O26 C13 DOUBLE NONE 8
E4F O30 C13 SINGLE NONE 9
E4F N25 C14 SINGLE NONE 10
E4F C18 N25 SINGLE BEGINWEDGE 11
E4F C3 C8 SINGLE NONE 12
E4F C3 C1 DOUBLE NONE 13
E4F C13 C7 SINGLE NONE 14
E4F C8 C9 DOUBLE NONE 15
E4F C14 O27 DOUBLE NONE 16
E4F C18 C17 SINGLE NONE 17
E4F C1 C2 SINGLE NONE 18
E4F C17 C19 SINGLE BEGINWEDGE 19
E4F C19 C10 SINGLE NONE 20
E4F C9 C17 SINGLE NONE 21
E4F C9 C4 SINGLE NONE 22
E4F C7 C10 SINGLE NONE 23
E4F C7 C12 DOUBLE NONE 24
E4F C2 C4 DOUBLE NONE 25
E4F C10 C5 DOUBLE NONE 26
E4F O29 C12 SINGLE NONE 27
E4F O29 C16 SINGLE NONE 28
E4F C12 C11 SINGLE NONE 29
E4F C5 C6 SINGLE NONE 30
E4F C16 O28 SINGLE NONE 31
E4F C11 C6 DOUBLE NONE 32
E4F C11 O28 SINGLE NONE 33
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
E4F MurckoScaffold S1 scaffold 'c1ccc2c(c1)CC[C@@H]2Cc1ccc2c(c1)OCO2' InChI=1S/C17H16O2/c1-2-4-15-13(3-1)6-7-14(15)9-12-5-8-16-17(10-12)19-11-18-16/h1-5,8,10,14H,6-7,9,11H2/t14-/m1/s1 VYYZJFVUNVEPJM-CQSZACIVSA-N
E4F amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
E4F phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
E4F Z52314092 F3 fragment CC(=O)NCCc1ccccc1C InChI=1S/C11H15NO/c1-9-5-3-4-6-11(9)7-8-12-10(2)13/h3-6H,7-8H2,1-2H3,(H,12,13) OAMCTZZCYXDSLI-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
E4F C1 S1 1
E4F C2 S1 1
E4F C3 S1 1
E4F C4 S1 1
E4F C5 S1 1
E4F C6 S1 1
E4F C7 S1 1
E4F C8 S1 1
E4F C9 S1 1
E4F C10 S1 1
E4F C11 S1 1
E4F C12 S1 1
E4F C15 S1 1
E4F C16 S1 1
E4F C17 S1 1
E4F C18 S1 1
E4F C19 S1 1
E4F O28 S1 1
E4F O29 S1 1
E4F N25 F1 1
E4F C14 F1 1
E4F O27 F1 1
E4F C20 F1 1
E4F C1 F2 1
E4F C3 F2 1
E4F C8 F2 1
E4F C9 F2 1
E4F C4 F2 1
E4F C2 F2 1
E4F C5 F2 2
E4F C10 F2 2
E4F C7 F2 2
E4F C12 F2 2
E4F C11 F2 2
E4F C6 F2 2
E4F C20 F3 1
E4F C14 F3 1
E4F O27 F3 1
E4F N25 F3 1
E4F C18 F3 1
E4F C15 F3 1
E4F C8 F3 1
E4F C3 F3 1
E4F C1 F3 1
E4F C2 F3 1
E4F C4 F3 1
E4F C9 F3 1
E4F C17 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id E4F
_pdbe_chem_comp_rdkit_properties.exactmw 410.184
_pdbe_chem_comp_rdkit_properties.amw 410.470
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 7
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 4
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 9
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 6
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 30
_pdbe_chem_comp_rdkit_properties.NumAtoms 56
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 7
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.391
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 211.515
_pdbe_chem_comp_rdkit_properties.tpsa 110.880
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.466
_pdbe_chem_comp_rdkit_properties.CrippenMR 108.667
_pdbe_chem_comp_rdkit_properties.chi0v 14.436
_pdbe_chem_comp_rdkit_properties.chi1v 7.850
_pdbe_chem_comp_rdkit_properties.chi2v 3.645
_pdbe_chem_comp_rdkit_properties.chi3v 3.645
_pdbe_chem_comp_rdkit_properties.chi4v 2.493
_pdbe_chem_comp_rdkit_properties.chi0n 40.436
_pdbe_chem_comp_rdkit_properties.chi1n 20.600
_pdbe_chem_comp_rdkit_properties.chi2n 3.645
_pdbe_chem_comp_rdkit_properties.chi3n 3.645
_pdbe_chem_comp_rdkit_properties.chi4n 2.493
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.060
_pdbe_chem_comp_rdkit_properties.kappa1 5.793
_pdbe_chem_comp_rdkit_properties.kappa2 8.751
_pdbe_chem_comp_rdkit_properties.kappa3 3.978
_pdbe_chem_comp_rdkit_properties.Phi 1.690
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
E4F UniChem ZINC ZINC000095920904
E4F UniChem PubChem 72551591
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
E4F C1 -2.970 3.943 -1.969 ETKDGv3 1
E4F C2 -2.959 4.370 -0.544 ETKDGv3 2
E4F C3 -2.144 2.971 -2.389 ETKDGv3 3
E4F C4 -2.136 3.774 0.334 ETKDGv3 4
E4F C5 -1.112 -1.419 0.758 ETKDGv3 5
E4F C6 -1.743 -2.477 -0.069 ETKDGv3 6
E4F C7 -3.098 0.010 0.368 ETKDGv3 7
E4F C8 -1.236 2.336 -1.415 ETKDGv3 8
E4F C9 -1.254 2.687 -0.139 ETKDGv3 9
E4F C10 -1.704 -0.204 0.927 ETKDGv3 10
E4F C11 -2.922 -2.204 -0.614 ETKDGv3 11
E4F C12 -3.600 -0.975 -0.392 ETKDGv3 12
E4F C13 -3.950 1.171 0.703 ETKDGv3 13
E4F C14 2.352 0.012 0.876 ETKDGv3 14
E4F C15 -0.190 1.326 -1.709 ETKDGv3 15
E4F C16 -4.932 -2.312 -1.700 ETKDGv3 16
E4F C17 -0.245 1.946 0.668 ETKDGv3 17
E4F C18 0.688 1.394 -0.446 ETKDGv3 18
E4F C19 -0.910 0.902 1.614 ETKDGv3 19
E4F C20 3.057 -1.292 1.098 ETKDGv3 20
E4F C21 4.226 -1.440 0.116 ETKDGv3 21
E4F C22 4.888 -2.827 0.187 ETKDGv3 22
E4F C23 5.647 -3.086 1.496 ETKDGv3 23
E4F N25 1.335 0.119 -0.130 ETKDGv3 24
E4F N24 6.707 -2.100 1.692 ETKDGv3 25
E4F O30 -3.889 1.752 1.965 ETKDGv3 26
E4F O26 -4.776 1.613 -0.140 ETKDGv3 27
E4F O27 2.689 1.023 1.551 ETKDGv3 28
E4F O28 -3.714 -3.013 -1.405 ETKDGv3 29
E4F O29 -4.824 -1.043 -1.034 ETKDGv3 30
E4F H1 -3.641 4.424 -2.668 ETKDGv3 31
E4F H2 -3.618 5.163 -0.217 ETKDGv3 32
E4F H3 -2.138 2.663 -3.427 ETKDGv3 33
E4F H4 -2.123 4.081 1.372 ETKDGv3 34
E4F H5 -0.143 -1.628 1.189 ETKDGv3 35
E4F H6 -1.257 -3.430 -0.231 ETKDGv3 36
E4F H7 0.388 1.597 -2.619 ETKDGv3 37
E4F H8 -0.667 0.330 -1.831 ETKDGv3 38
E4F H9 -5.027 -2.159 -2.796 ETKDGv3 39
E4F H10 -5.803 -2.877 -1.306 ETKDGv3 40
E4F H11 0.322 2.671 1.292 ETKDGv3 41
E4F H12 1.484 2.151 -0.638 ETKDGv3 42
E4F H13 -1.552 1.435 2.339 ETKDGv3 43
E4F H14 -0.113 0.454 2.246 ETKDGv3 44
E4F H15 2.336 -2.126 0.958 ETKDGv3 45
E4F H16 3.427 -1.327 2.144 ETKDGv3 46
E4F H17 4.980 -0.645 0.304 ETKDGv3 47
E4F H18 3.845 -1.299 -0.920 ETKDGv3 48
E4F H19 5.601 -2.922 -0.661 ETKDGv3 49
E4F H20 4.115 -3.615 0.053 ETKDGv3 50
E4F H21 6.090 -4.106 1.461 ETKDGv3 51
E4F H22 4.946 -3.059 2.357 ETKDGv3 52
E4F H23 1.152 -0.713 -0.736 ETKDGv3 53
E4F H24 7.444 -2.265 0.969 ETKDGv3 54
E4F H25 7.151 -2.291 2.619 ETKDGv3 55
E4F H27 -4.479 2.540 2.203 ETKDGv3 56
#