data_DY1
#
_chem_comp.id DY1
_chem_comp.name
"[(1S)-6-fluoro-8-(methylsulfonyl)-9-{(1R)-1-[4-(trifluoromethyl)phenyl]ethyl}-2,3,4,9-tetrahydro-1H-carbazol-1-yl]acetic acid"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C24 H23 F4 N O4 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2017-11-13
_chem_comp.pdbx_modified_date 2018-11-09
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 497.502
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code DY1
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6BLF
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
DY1 C2 C1 C 0 1 Y N N N N N 32.607 -6.942 11.688 4.816 0.208 0.582 C2 DY1 1
DY1 C3 C2 C 0 1 Y N N N N N 31.761 -6.291 12.585 3.583 0.627 0.135 C3 DY1 2
DY1 C5 C3 C 0 1 Y N N N N N 30.540 -5.327 10.738 2.806 -1.661 0.198 C5 DY1 3
DY1 C7 C4 C 0 1 Y N N N N N 28.951 -4.098 11.761 0.665 -1.422 -0.493 C7 DY1 4
DY1 C9 C5 C 0 1 N N N N N N 28.455 -4.824 14.909 1.271 2.232 -0.140 C9 DY1 5
DY1 C10 C6 C 0 1 Y N N N N N 30.059 -2.825 14.413 -0.859 1.003 -0.458 C10 DY1 6
DY1 C11 C7 C 0 1 Y N N N N N 30.741 -2.127 13.417 -1.211 0.585 0.812 C11 DY1 7
DY1 C12 C8 C 0 1 Y N N N N N 31.111 -0.807 13.596 -2.543 0.536 1.179 C12 DY1 8
DY1 C13 C9 C 0 1 Y N N N N N 30.823 -0.145 14.784 -3.523 0.906 0.276 C13 DY1 9
DY1 C15 C10 C 0 1 Y N N N N N 29.751 -2.151 15.592 -1.839 1.373 -1.360 C15 DY1 10
DY1 C18 C11 C 0 1 N N N N N N 26.480 -4.217 12.061 -1.705 -0.704 -0.273 C18 DY1 11
DY1 C20 C12 C 0 1 N N N N N N 27.597 -2.310 10.754 -1.112 -3.134 -0.357 C20 DY1 12
DY1 C21 C13 C 0 1 N N N N N N 27.621 -3.041 9.412 -0.021 -4.127 -0.768 C21 DY1 13
DY1 C22 C14 C 0 1 N N N N N N 28.888 -3.882 9.246 1.266 -3.828 0.003 C22 DY1 14
DY1 F3 F1 F 0 1 N N N N N N 33.180 -7.393 9.454 6.275 -1.530 1.273 F3 DY1 15
DY1 C1 C15 C 0 1 Y N N N N N 32.375 -6.761 10.338 5.059 -1.137 0.835 C1 DY1 16
DY1 S S1 S 0 1 N N N N N N 32.087 -6.637 14.316 3.296 2.335 -0.187 S DY1 17
DY1 O2 O1 O 0 1 N N N N N N 32.750 -5.501 14.887 2.378 2.732 0.822 O2 DY1 18
DY1 O3 O2 O 0 1 N N N N N N 30.865 -7.073 14.922 4.597 2.901 -0.259 O3 DY1 19
DY1 C23 C16 C 0 1 N N N N N N 33.206 -7.985 14.336 2.500 2.361 -1.817 C23 DY1 20
DY1 C4 C17 C 0 1 Y N N N N N 30.717 -5.456 12.135 2.564 -0.299 -0.063 C4 DY1 21
DY1 N N1 N 0 1 Y N N N N N 29.742 -4.652 12.765 1.254 -0.190 -0.481 N DY1 22
DY1 C8 C18 C 0 1 N N R N N N 29.711 -4.294 14.217 0.593 1.063 -0.856 C8 DY1 23
DY1 C14 C19 C 0 1 Y N N N N N 30.131 -0.832 15.779 -3.171 1.325 -0.993 C14 DY1 24
DY1 C16 C20 C 0 1 N N N N N N 31.299 1.253 15.012 -4.975 0.852 0.676 C16 DY1 25
DY1 F2 F2 F 0 1 N N N N N N 31.706 1.857 13.900 -5.184 -0.241 1.525 F2 DY1 26
DY1 F1 F3 F 0 1 N N N N N N 30.368 2.030 15.538 -5.319 2.033 1.343 F1 DY1 27
DY1 F F4 F 0 1 N N N N N N 32.331 1.305 15.824 -5.768 0.713 -0.467 F DY1 28
DY1 C17 C21 C 0 1 N N S N N N 27.697 -3.291 11.927 -0.760 -1.739 -0.886 C17 DY1 29
DY1 C19 C22 C 0 1 N N N N N N 25.218 -3.412 12.373 -3.124 -1.205 -0.360 C19 DY1 30
DY1 O1 O3 O 0 1 N N N N N N 24.339 -3.353 11.484 -3.348 -2.311 -0.790 O1 DY1 31
DY1 O O4 O 0 1 N N N N N N 25.124 -2.856 13.487 -4.138 -0.422 0.040 O DY1 32
DY1 C6 C23 C 0 1 Y N N N N N 29.424 -4.448 10.532 1.557 -2.353 -0.104 C6 DY1 33
DY1 C C24 C 0 1 Y N N N N N 31.371 -5.980 9.833 4.065 -2.072 0.642 C DY1 34
DY1 H1 H1 H 0 1 N N N N N N 33.416 -7.567 12.037 5.604 0.931 0.733 H1 DY1 35
DY1 H2 H2 H 0 1 N N N N N N 28.473 -4.539 15.971 1.486 1.951 0.891 H2 DY1 36
DY1 H3 H3 H 0 1 N N N N N N 27.563 -4.394 14.429 2.201 2.481 -0.650 H3 DY1 37
DY1 H4 H4 H 0 1 N N N N N N 28.425 -5.920 14.824 0.609 3.098 -0.149 H4 DY1 38
DY1 H5 H5 H 0 1 N N N N N N 30.984 -2.626 12.490 -0.446 0.296 1.516 H5 DY1 39
DY1 H6 H6 H 0 1 N N N N N N 31.629 -0.285 12.805 -2.818 0.208 2.170 H6 DY1 40
DY1 H7 H7 H 0 1 N N N N N N 29.208 -2.664 16.372 -1.564 1.700 -2.352 H7 DY1 41
DY1 H8 H8 H 0 1 N N N N N N 26.336 -4.762 11.117 -1.440 -0.543 0.772 H8 DY1 42
DY1 H9 H9 H 0 1 N N N N N N 26.661 -4.935 12.875 -1.617 0.236 -0.819 H9 DY1 43
DY1 H10 H10 H 0 1 N N N N N N 28.447 -1.613 10.797 -2.067 -3.451 -0.775 H10 DY1 44
DY1 H11 H11 H 0 1 N N N N N N 26.656 -1.747 10.838 -1.184 -3.103 0.730 H11 DY1 45
DY1 H12 H12 H 0 1 N N N N N N 27.578 -2.299 8.601 -0.352 -5.142 -0.549 H12 DY1 46
DY1 H13 H13 H 0 1 N N N N N N 26.744 -3.702 9.351 0.175 -4.031 -1.836 H13 DY1 47
DY1 H14 H14 H 0 1 N N N N N N 28.661 -4.719 8.569 1.134 -4.092 1.052 H14 DY1 48
DY1 H15 H15 H 0 1 N N N N N N 29.667 -3.248 8.797 2.089 -4.402 -0.422 H15 DY1 49
DY1 H16 H16 H 0 1 N N N N N N 33.447 -8.247 15.377 1.529 1.869 -1.755 H16 DY1 50
DY1 H17 H17 H 0 1 N N N N N N 32.746 -8.851 13.837 2.364 3.393 -2.139 H17 DY1 51
DY1 H18 H18 H 0 1 N N N N N N 34.128 -7.704 13.806 3.128 1.835 -2.536 H18 DY1 52
DY1 H19 H19 H 0 1 N N N N N N 30.544 -4.849 14.673 0.669 1.204 -1.934 H19 DY1 53
DY1 H20 H20 H 0 1 N N N N N N 29.889 -0.332 16.705 -3.936 1.614 -1.698 H20 DY1 54
DY1 H21 H21 H 0 1 N N N N N N 27.781 -2.705 12.854 -0.852 -1.725 -1.972 H21 DY1 55
DY1 H22 H22 H 0 1 N N N N N N 24.296 -2.394 13.542 -5.022 -0.812 0.035 H22 DY1 56
DY1 H23 H23 H 0 1 N N N N N N 31.228 -5.874 8.768 4.257 -3.116 0.840 H23 DY1 57
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DY1 C22 C21 SING N N 1
DY1 C22 C6 SING N N 2
DY1 C21 C20 SING N N 3
DY1 F3 C1 SING N N 4
DY1 C C1 DOUB Y N 5
DY1 C C5 SING Y N 6
DY1 C1 C2 SING Y N 7
DY1 C6 C5 SING Y N 8
DY1 C6 C7 DOUB Y N 9
DY1 C5 C4 DOUB Y N 10
DY1 C20 C17 SING N N 11
DY1 O1 C19 DOUB N N 12
DY1 C2 C3 DOUB Y N 13
DY1 C7 C17 SING N N 14
DY1 C7 N SING Y N 15
DY1 C17 C18 SING N N 16
DY1 C18 C19 SING N N 17
DY1 C4 C3 SING Y N 18
DY1 C4 N SING Y N 19
DY1 C19 O SING N N 20
DY1 C3 S SING N N 21
DY1 N C8 SING N N 22
DY1 C11 C12 DOUB Y N 23
DY1 C11 C10 SING Y N 24
DY1 C12 C13 SING Y N 25
DY1 F2 C16 SING N N 26
DY1 C8 C10 SING N N 27
DY1 C8 C9 SING N N 28
DY1 S C23 SING N N 29
DY1 S O2 DOUB N N 30
DY1 S O3 DOUB N N 31
DY1 C10 C15 DOUB Y N 32
DY1 C13 C16 SING N N 33
DY1 C13 C14 DOUB Y N 34
DY1 C16 F1 SING N N 35
DY1 C16 F SING N N 36
DY1 C15 C14 SING Y N 37
DY1 C2 H1 SING N N 38
DY1 C9 H2 SING N N 39
DY1 C9 H3 SING N N 40
DY1 C9 H4 SING N N 41
DY1 C11 H5 SING N N 42
DY1 C12 H6 SING N N 43
DY1 C15 H7 SING N N 44
DY1 C18 H8 SING N N 45
DY1 C18 H9 SING N N 46
DY1 C20 H10 SING N N 47
DY1 C20 H11 SING N N 48
DY1 C21 H12 SING N N 49
DY1 C21 H13 SING N N 50
DY1 C22 H14 SING N N 51
DY1 C22 H15 SING N N 52
DY1 C23 H16 SING N N 53
DY1 C23 H17 SING N N 54
DY1 C23 H18 SING N N 55
DY1 C8 H19 SING N N 56
DY1 C14 H20 SING N N 57
DY1 C17 H21 SING N N 58
DY1 O H22 SING N N 59
DY1 C H23 SING N N 60
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
DY1 SMILES ACDLabs 12.01 c4c(S(C)(=O)=O)c2c(c1c(C(CC(O)=O)CCC1)n2C(C)c3ccc(cc3)C(F)(F)F)cc4F
DY1 InChI InChI 1.03 InChI=1S/C24H23F4NO4S/c1-13(14-6-8-16(9-7-14)24(26,27)28)29-22-15(10-21(30)31)4-3-5-18(22)19-11-17(25)12-20(23(19)29)34(2,32)33/h6-9,11-13,15H,3-5,10H2,1-2H3,(H,30,31)/t13-,15+/m1/s1
DY1 InChIKey InChI 1.03 KSSMIJUMUAANAX-HIFRSBDPSA-N
DY1 SMILES_CANONICAL CACTVS 3.385 C[C@@H](n1c2[C@@H](CCCc2c3cc(F)cc(c13)[S](C)(=O)=O)CC(O)=O)c4ccc(cc4)C(F)(F)F
DY1 SMILES CACTVS 3.385 C[CH](n1c2[CH](CCCc2c3cc(F)cc(c13)[S](C)(=O)=O)CC(O)=O)c4ccc(cc4)C(F)(F)F
DY1 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 C[C@H](c1ccc(cc1)C(F)(F)F)n2c3c(cc(cc3S(=O)(=O)C)F)c4c2[C@@H](CCC4)CC(=O)O
DY1 SMILES "OpenEye OEToolkits" 2.0.6 CC(c1ccc(cc1)C(F)(F)F)n2c3c(cc(cc3S(=O)(=O)C)F)c4c2C(CCC4)CC(=O)O
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
DY1 "SYSTEMATIC NAME" ACDLabs 12.01 "[(1S)-6-fluoro-8-(methylsulfonyl)-9-{(1R)-1-[4-(trifluoromethyl)phenyl]ethyl}-2,3,4,9-tetrahydro-1H-carbazol-1-yl]acetic acid"
DY1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "2-[(1~{S})-6-fluoranyl-8-methylsulfonyl-9-[(1~{R})-1-[4-(trifluoromethyl)phenyl]ethyl]-1,2,3,4-tetrahydrocarbazol-1-yl]ethanoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
DY1 'Create component' 2017-11-13 RCSB
DY1 'Initial release' 2018-11-14 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
DY1 C2 C 13.279 -3.538 1
DY1 C3 C 12.225 -2.385 2
DY1 C5 C 10.238 -4.160 3
DY1 C7 C 8.275 -2.734 4
DY1 C9 C 10.787 0.398 5
DY1 C10 C 8.738 0.947 6
DY1 C11 C 7.238 0.947 7
DY1 C12 C 6.488 2.246 8
DY1 C13 C 7.238 3.545 9
DY1 C15 C 9.488 2.246 10
DY1 C18 C 5.648 -1.369 11
DY1 C20 C 5.697 -3.538 12
DY1 C21 C 6.180 -5.024 13
DY1 C22 C 7.711 -5.338 14
DY1 F3 F 13.796 -6.143 15
DY1 C1 C 12.796 -5.024 16
DY1 S S 12.672 -0.954 17
DY1 O2 O 11.240 -0.507 18
DY1 O3 O 13.119 0.478 19
DY1 C23 C 14.104 -1.401 20
DY1 C4 C 10.702 -2.734 21
DY1 N N 9.488 -1.852 22
DY1 C8 C 9.488 -0.352 23
DY1 C14 C 8.738 3.545 24
DY1 C16 C 6.488 4.844 25
DY1 F2 F 5.738 6.143 26
DY1 F1 F 7.787 5.594 27
DY1 F F 5.189 4.094 28
DY1 C17 C 6.752 -2.385 29
DY1 C19 C 4.216 -1.816 30
DY1 O1 O 3.888 -3.280 31
DY1 O O 3.114 -0.799 32
DY1 C6 C 8.738 -4.160 33
DY1 C C 11.266 -5.338 34
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
DY1 C22 C21 SINGLE NONE 1
DY1 C22 C6 SINGLE NONE 2
DY1 C21 C20 SINGLE NONE 3
DY1 F3 C1 SINGLE NONE 4
DY1 C C1 SINGLE NONE 5
DY1 C C5 DOUBLE NONE 6
DY1 C1 C2 DOUBLE NONE 7
DY1 C6 C5 SINGLE NONE 8
DY1 C6 C7 DOUBLE NONE 9
DY1 C5 C4 SINGLE NONE 10
DY1 C20 C17 SINGLE NONE 11
DY1 O1 C19 DOUBLE NONE 12
DY1 C2 C3 SINGLE NONE 13
DY1 C7 C17 SINGLE NONE 14
DY1 C7 N SINGLE NONE 15
DY1 C17 C18 SINGLE BEGINWEDGE 16
DY1 C18 C19 SINGLE NONE 17
DY1 C4 C3 DOUBLE NONE 18
DY1 C4 N SINGLE NONE 19
DY1 C19 O SINGLE NONE 20
DY1 C3 S SINGLE NONE 21
DY1 N C8 SINGLE NONE 22
DY1 C11 C12 DOUBLE NONE 23
DY1 C11 C10 SINGLE NONE 24
DY1 C12 C13 SINGLE NONE 25
DY1 F2 C16 SINGLE NONE 26
DY1 C8 C10 SINGLE NONE 27
DY1 C8 C9 SINGLE BEGINWEDGE 28
DY1 S C23 SINGLE NONE 29
DY1 S O2 DOUBLE NONE 30
DY1 S O3 DOUBLE NONE 31
DY1 C10 C15 DOUBLE NONE 32
DY1 C13 C16 SINGLE NONE 33
DY1 C13 C14 DOUBLE NONE 34
DY1 C16 F1 SINGLE NONE 35
DY1 C16 F SINGLE NONE 36
DY1 C15 C14 SINGLE NONE 37
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
DY1 MurckoScaffold S1 scaffold c1ccc(Cn2c3c(c4ccccc42)CCCC3)cc1 InChI=1S/C19H19N/c1-2-8-15(9-3-1)14-20-18-12-6-4-10-16(18)17-11-5-7-13-19(17)20/h1-4,6,8-10,12H,5,7,11,13-14H2 JWUGABHFERCMFZ-UHFFFAOYSA-N
DY1 indole F1 fragment 'c1ccc2[nH]ccc2c1' InChI=1S/C8H7N/c1-2-4-8-7(3-1)5-6-9-8/h1-6,9H SIKJAQJRHWYJAI-UHFFFAOYSA-N
DY1 phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
DY1 pyrrole F3 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
DY1 C2 S1 1
DY1 C3 S1 1
DY1 C5 S1 1
DY1 C7 S1 1
DY1 C10 S1 1
DY1 C11 S1 1
DY1 C12 S1 1
DY1 C13 S1 1
DY1 C15 S1 1
DY1 C20 S1 1
DY1 C21 S1 1
DY1 C22 S1 1
DY1 C1 S1 1
DY1 C4 S1 1
DY1 N S1 1
DY1 C8 S1 1
DY1 C14 S1 1
DY1 C17 S1 1
DY1 C6 S1 1
DY1 C S1 1
DY1 C4 F1 1
DY1 C5 F1 1
DY1 C6 F1 1
DY1 C7 F1 1
DY1 N F1 1
DY1 C F1 1
DY1 C1 F1 1
DY1 C2 F1 1
DY1 C3 F1 1
DY1 C2 F2 1
DY1 C1 F2 1
DY1 C F2 1
DY1 C5 F2 1
DY1 C4 F2 1
DY1 C3 F2 1
DY1 C10 F2 2
DY1 C11 F2 2
DY1 C12 F2 2
DY1 C13 F2 2
DY1 C14 F2 2
DY1 C15 F2 2
DY1 C7 F3 1
DY1 C6 F3 1
DY1 C5 F3 1
DY1 C4 F3 1
DY1 N F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id DY1
_pdbe_chem_comp_rdkit_properties.exactmw 497.128
_pdbe_chem_comp_rdkit_properties.amw 497.510
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 5
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 7
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 34
_pdbe_chem_comp_rdkit_properties.NumAtoms 57
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 10
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.375
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 225.877
_pdbe_chem_comp_rdkit_properties.tpsa 76.370
_pdbe_chem_comp_rdkit_properties.CrippenClogP 4.951
_pdbe_chem_comp_rdkit_properties.CrippenMR 115.495
_pdbe_chem_comp_rdkit_properties.chi0v 16.817
_pdbe_chem_comp_rdkit_properties.chi1v 10.060
_pdbe_chem_comp_rdkit_properties.chi2v 5.153
_pdbe_chem_comp_rdkit_properties.chi3v 5.153
_pdbe_chem_comp_rdkit_properties.chi4v 3.750
_pdbe_chem_comp_rdkit_properties.chi0n 39.000
_pdbe_chem_comp_rdkit_properties.chi1n 19.985
_pdbe_chem_comp_rdkit_properties.chi2n 4.320
_pdbe_chem_comp_rdkit_properties.chi3n 4.320
_pdbe_chem_comp_rdkit_properties.chi4n 3.078
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.880
_pdbe_chem_comp_rdkit_properties.kappa1 8.653
_pdbe_chem_comp_rdkit_properties.kappa2 8.407
_pdbe_chem_comp_rdkit_properties.kappa3 4.307
_pdbe_chem_comp_rdkit_properties.Phi 2.140
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
DY1 UniChem PubChem 134823954
DY1 UniChem BindingDb 50460673
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
DY1 C2 -0.506 -4.122 -1.062 ETKDGv3 1
DY1 C3 -0.239 -3.152 0.043 ETKDGv3 2
DY1 C5 -1.163 -1.450 -1.425 ETKDGv3 3
DY1 C7 -0.997 0.364 -0.097 ETKDGv3 4
DY1 C9 0.728 0.124 2.756 ETKDGv3 5
DY1 C10 1.938 0.393 0.477 ETKDGv3 6
DY1 C11 2.430 -0.217 -0.785 ETKDGv3 7
DY1 C12 3.235 0.465 -1.607 ETKDGv3 8
DY1 C13 3.652 1.849 -1.274 ETKDGv3 9
DY1 C15 2.349 1.639 0.793 ETKDGv3 10
DY1 C18 -2.352 1.678 1.540 ETKDGv3 11
DY1 C20 -1.649 2.728 -0.703 ETKDGv3 12
DY1 C21 -2.689 2.122 -1.656 ETKDGv3 13
DY1 C22 -2.169 0.825 -2.286 ETKDGv3 14
DY1 F3 -1.314 -4.620 -3.203 ETKDGv3 15
DY1 C1 -1.071 -3.721 -2.217 ETKDGv3 16
DY1 S 0.226 -3.792 1.626 ETKDGv3 17
DY1 O2 -0.355 -2.940 2.717 ETKDGv3 18
DY1 O3 1.723 -3.832 1.749 ETKDGv3 19
DY1 C23 -0.412 -5.440 1.852 ETKDGv3 20
DY1 C4 -0.490 -1.843 -0.207 ETKDGv3 21
DY1 N -0.289 -0.681 0.624 ETKDGv3 22
DY1 C8 0.981 -0.425 1.340 ETKDGv3 23
DY1 C14 3.246 2.388 -0.111 ETKDGv3 24
DY1 C16 4.598 2.601 -2.175 ETKDGv3 25
DY1 F2 5.888 2.467 -1.696 ETKDGv3 26
DY1 F1 4.544 2.104 -3.466 ETKDGv3 27
DY1 F 4.265 3.944 -2.213 ETKDGv3 28
DY1 C17 -1.268 1.755 0.442 ETKDGv3 29
DY1 C19 -2.488 2.971 2.283 ETKDGv3 30
DY1 O1 -1.618 3.308 3.130 ETKDGv3 31
DY1 O -3.565 3.812 2.021 ETKDGv3 32
DY1 C6 -1.496 -0.053 -1.268 ETKDGv3 33
DY1 C -1.457 -2.305 -2.405 ETKDGv3 34
DY1 H1 -0.247 -5.165 -0.941 ETKDGv3 35
DY1 H2 1.686 0.171 3.317 ETKDGv3 36
DY1 H3 0.278 1.132 2.751 ETKDGv3 37
DY1 H4 0.039 -0.542 3.311 ETKDGv3 38
DY1 H5 2.143 -1.227 -1.045 ETKDGv3 39
DY1 H6 3.584 -0.008 -2.516 ETKDGv3 40
DY1 H7 2.036 2.131 1.702 ETKDGv3 41
DY1 H8 -2.092 0.885 2.274 ETKDGv3 42
DY1 H9 -3.333 1.394 1.105 ETKDGv3 43
DY1 H10 -2.033 3.687 -0.295 ETKDGv3 44
DY1 H11 -0.733 2.971 -1.286 ETKDGv3 45
DY1 H12 -3.636 1.922 -1.113 ETKDGv3 46
DY1 H13 -2.918 2.852 -2.463 ETKDGv3 47
DY1 H14 -1.431 1.070 -3.079 ETKDGv3 48
DY1 H15 -3.016 0.278 -2.753 ETKDGv3 49
DY1 H16 -1.489 -5.463 1.587 ETKDGv3 50
DY1 H17 -0.290 -5.741 2.913 ETKDGv3 51
DY1 H18 0.146 -6.152 1.210 ETKDGv3 52
DY1 H19 1.504 -1.382 1.501 ETKDGv3 53
DY1 H20 3.567 3.380 0.181 ETKDGv3 54
DY1 H21 -0.337 2.152 0.889 ETKDGv3 55
DY1 H22 -3.665 4.695 2.507 ETKDGv3 56
DY1 H23 -1.979 -1.984 -3.296 ETKDGv3 57
#