data_DJ9
#
_chem_comp.id DJ9
_chem_comp.name 2-(1H-indol-6-yl)-4-(3,4,5-trimethoxyphenyl)-1H-imidazo[4,5-c]pyridine
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C23 H20 N4 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2018-01-24
_chem_comp.pdbx_modified_date 2019-07-05
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 400.430
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code DJ9
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6C77
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
DJ9 C1 C1 C 0 1 N N N N N N 14.951 -65.080 -37.172 4.207 3.696 0.955 C1 DJ9 1
DJ9 C10 C2 C 0 1 Y N N N N N 19.371 -68.453 -43.531 -0.595 -3.167 -0.175 C10 DJ9 2
DJ9 C11 C3 C 0 1 Y N N N N N 18.336 -66.678 -44.321 -2.011 -1.482 0.008 C11 DJ9 3
DJ9 C12 C4 C 0 1 Y N N N N N 17.872 -65.620 -45.222 -3.266 -0.711 0.130 C12 DJ9 4
DJ9 C13 C5 C 0 1 Y N N N N N 17.975 -65.750 -46.585 -3.221 0.678 0.194 C13 DJ9 5
DJ9 C14 C6 C 0 1 Y N N N N N 17.522 -64.720 -47.394 -4.401 1.400 0.303 C14 DJ9 6
DJ9 C15 C7 C 0 1 Y N N N N N 16.944 -63.376 -49.080 -6.035 2.932 0.479 C15 DJ9 7
DJ9 C16 C8 C 0 1 Y N N N N N 16.617 -62.699 -47.947 -6.664 1.745 0.461 C16 DJ9 8
DJ9 C17 C9 C 0 1 Y N N N N N 16.975 -63.538 -46.845 -5.631 0.714 0.347 C17 DJ9 9
DJ9 C18 C10 C 0 1 Y N N N N N 16.893 -63.424 -45.452 -5.659 -0.683 0.281 C18 DJ9 10
DJ9 C19 C11 C 0 1 Y N N N N N 17.339 -64.458 -44.663 -4.495 -1.383 0.174 C19 DJ9 11
DJ9 C2 C12 C 0 1 Y N N N N N 15.961 -66.967 -38.154 3.716 1.666 -0.184 C2 DJ9 12
DJ9 C20 C13 C 0 1 Y N N N N N 18.545 -67.894 -42.551 0.106 -1.945 -0.154 C20 DJ9 13
DJ9 C21 C14 C 0 1 Y N N N N N 16.316 -67.530 -40.465 3.528 -0.660 0.391 C21 DJ9 14
DJ9 C22 C15 C 0 1 Y N N N N N 15.494 -67.048 -39.468 4.245 0.523 0.407 C22 DJ9 15
DJ9 C23 C16 C 0 1 N N N N N N 13.713 -66.664 -41.003 5.950 -0.642 1.588 C23 DJ9 16
DJ9 C3 C17 C 0 1 Y N N N N N 17.262 -67.386 -37.867 2.466 1.622 -0.792 C3 DJ9 17
DJ9 C4 C18 C 0 1 N N N N N N 19.013 -67.420 -36.254 0.660 2.625 -1.971 C4 DJ9 18
DJ9 C5 C19 C 0 1 Y N N N N N 18.078 -67.873 -38.870 1.748 0.440 -0.814 C5 DJ9 19
DJ9 C6 C20 C 0 1 Y N N N N N 17.620 -67.939 -40.186 2.279 -0.709 -0.227 C6 DJ9 20
DJ9 C7 C21 C 0 1 Y N N N N N 18.471 -68.465 -41.276 1.510 -1.974 -0.246 C7 DJ9 21
DJ9 C8 C22 C 0 1 Y N N N N N 20.009 -70.082 -41.974 1.504 -4.288 -0.370 C8 DJ9 22
DJ9 C9 C23 C 0 1 Y N N N N N 20.124 -69.581 -43.245 0.128 -4.350 -0.285 C9 DJ9 23
DJ9 N1 N1 N 0 1 Y N N N N N 19.226 -69.555 -41.015 2.145 -3.134 -0.348 N1 DJ9 24
DJ9 N2 N2 N 0 1 Y N N N N N 19.211 -67.667 -44.655 -1.929 -2.849 -0.067 N2 DJ9 25
DJ9 N3 N3 N 0 1 Y N N N N N 17.492 -64.590 -48.764 -4.684 2.746 0.386 N3 DJ9 26
DJ9 N4 N4 N 0 1 Y N N N N N 17.900 -66.784 -43.074 -0.807 -0.963 -0.043 N4 DJ9 27
DJ9 O1 O1 O 0 1 N N N N N N 15.152 -66.490 -37.148 4.420 2.830 -0.162 O1 DJ9 28
DJ9 O2 O2 O 0 1 N N N N N N 17.630 -67.270 -36.556 1.949 2.742 -1.364 O2 DJ9 29
DJ9 O3 O3 O 0 1 N N N N N N 14.211 -66.623 -39.669 5.468 0.569 1.002 O3 DJ9 30
DJ9 H1 H1 H 0 1 N N N N N N 14.296 -64.788 -36.338 4.828 4.586 0.848 H1 DJ9 31
DJ9 H2 H2 H 0 1 N N N N N N 15.920 -64.570 -37.073 3.158 3.988 0.993 H2 DJ9 32
DJ9 H3 H3 H 0 1 N N N N N N 14.481 -64.793 -38.124 4.473 3.176 1.875 H3 DJ9 33
DJ9 H4 H4 H 0 1 N N N N N N 18.403 -66.641 -47.020 -2.272 1.193 0.160 H4 DJ9 34
DJ9 H5 H5 H 0 1 N N N N N N 16.793 -63.009 -50.084 -6.524 3.892 0.557 H5 DJ9 35
DJ9 H6 H6 H 0 1 N N N N N N 16.172 -61.716 -47.890 -7.730 1.582 0.520 H6 DJ9 36
DJ9 H7 H7 H 0 1 N N N N N N 16.483 -62.532 -45.001 -6.604 -1.206 0.314 H7 DJ9 37
DJ9 H8 H8 H 0 1 N N N N N N 17.275 -64.369 -43.589 -4.520 -2.461 0.119 H8 DJ9 38
DJ9 H9 H9 H 0 1 N N N N N N 15.944 -67.592 -41.477 3.941 -1.548 0.846 H9 DJ9 39
DJ9 H10 H10 H 0 1 N N N N N N 12.676 -66.297 -41.019 5.259 -0.969 2.365 H10 DJ9 40
DJ9 H11 H11 H 0 1 N N N N N N 14.338 -66.028 -41.647 6.025 -1.412 0.821 H11 DJ9 41
DJ9 H12 H12 H 0 1 N N N N N N 13.741 -67.700 -41.373 6.932 -0.467 2.026 H12 DJ9 42
DJ9 H13 H13 H 0 1 N N N N N N 19.167 -67.304 -35.171 0.366 3.588 -2.388 H13 DJ9 43
DJ9 H14 H14 H 0 1 N N N N N N 19.350 -68.419 -36.567 0.700 1.881 -2.766 H14 DJ9 44
DJ9 H15 H15 H 0 1 N N N N N N 19.591 -66.653 -36.791 -0.068 2.317 -1.221 H15 DJ9 45
DJ9 H16 H16 H 0 1 N N N N N N 19.078 -68.205 -38.633 0.777 0.406 -1.286 H16 DJ9 46
DJ9 H17 H17 H 0 1 N N N N N N 20.587 -70.960 -41.725 2.070 -5.205 -0.455 H17 DJ9 47
DJ9 H18 H18 H 0 1 N N N N N N 20.766 -70.040 -43.983 -0.380 -5.303 -0.304 H18 DJ9 48
DJ9 H19 H19 H 0 1 N N N N N N 19.652 -67.798 -45.543 -2.671 -3.473 -0.052 H19 DJ9 49
DJ9 H20 H20 H 0 1 N N N N N N 17.817 -65.271 -49.421 -4.022 3.455 0.379 H20 DJ9 50
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
DJ9 C15 N3 SING Y N 1
DJ9 C15 C16 DOUB Y N 2
DJ9 N3 C14 SING Y N 3
DJ9 C16 C17 SING Y N 4
DJ9 C14 C17 DOUB Y N 5
DJ9 C14 C13 SING Y N 6
DJ9 C17 C18 SING Y N 7
DJ9 C13 C12 DOUB Y N 8
DJ9 C18 C19 DOUB Y N 9
DJ9 C12 C19 SING Y N 10
DJ9 C12 C11 SING N N 11
DJ9 N2 C11 SING Y N 12
DJ9 N2 C10 SING Y N 13
DJ9 C11 N4 DOUB Y N 14
DJ9 C10 C9 DOUB Y N 15
DJ9 C10 C20 SING Y N 16
DJ9 C9 C8 SING Y N 17
DJ9 N4 C20 SING Y N 18
DJ9 C20 C7 DOUB Y N 19
DJ9 C8 N1 DOUB Y N 20
DJ9 C7 N1 SING Y N 21
DJ9 C7 C6 SING N N 22
DJ9 C23 O3 SING N N 23
DJ9 C21 C6 DOUB Y N 24
DJ9 C21 C22 SING Y N 25
DJ9 C6 C5 SING Y N 26
DJ9 O3 C22 SING N N 27
DJ9 C22 C2 DOUB Y N 28
DJ9 C5 C3 DOUB Y N 29
DJ9 C2 C3 SING Y N 30
DJ9 C2 O1 SING N N 31
DJ9 C3 O2 SING N N 32
DJ9 C1 O1 SING N N 33
DJ9 O2 C4 SING N N 34
DJ9 C1 H1 SING N N 35
DJ9 C1 H2 SING N N 36
DJ9 C1 H3 SING N N 37
DJ9 C13 H4 SING N N 38
DJ9 C15 H5 SING N N 39
DJ9 C16 H6 SING N N 40
DJ9 C18 H7 SING N N 41
DJ9 C19 H8 SING N N 42
DJ9 C21 H9 SING N N 43
DJ9 C23 H10 SING N N 44
DJ9 C23 H11 SING N N 45
DJ9 C23 H12 SING N N 46
DJ9 C4 H13 SING N N 47
DJ9 C4 H14 SING N N 48
DJ9 C4 H15 SING N N 49
DJ9 C5 H16 SING N N 50
DJ9 C8 H17 SING N N 51
DJ9 C9 H18 SING N N 52
DJ9 N2 H19 SING N N 53
DJ9 N3 H20 SING N N 54
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
DJ9 SMILES ACDLabs 12.01 COc1c(OC)cc(cc1OC)c2c3c(ccn2)nc(n3)c4ccc5c(c4)ncc5
DJ9 InChI InChI 1.03 InChI=1S/C23H20N4O3/c1-28-18-11-15(12-19(29-2)22(18)30-3)20-21-16(7-9-25-20)26-23(27-21)14-5-4-13-6-8-24-17(13)10-14/h4-12,24H,1-3H3,(H,26,27)
DJ9 InChIKey InChI 1.03 SQSZRGOISCZCTQ-UHFFFAOYSA-N
DJ9 SMILES_CANONICAL CACTVS 3.385 COc1cc(cc(OC)c1OC)c2nccc3[nH]c(nc23)c4ccc5cc[nH]c5c4
DJ9 SMILES CACTVS 3.385 COc1cc(cc(OC)c1OC)c2nccc3[nH]c(nc23)c4ccc5cc[nH]c5c4
DJ9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 COc1cc(cc(c1OC)OC)c2c3c(ccn2)[nH]c(n3)c4ccc5cc[nH]c5c4
DJ9 SMILES "OpenEye OEToolkits" 2.0.6 COc1cc(cc(c1OC)OC)c2c3c(ccn2)[nH]c(n3)c4ccc5cc[nH]c5c4
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
DJ9 "SYSTEMATIC NAME" ACDLabs 12.01 2-(1H-indol-6-yl)-4-(3,4,5-trimethoxyphenyl)-1H-imidazo[4,5-c]pyridine
DJ9 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 2-(1~{H}-indol-6-yl)-4-(3,4,5-trimethoxyphenyl)-1~{H}-imidazo[4,5-c]pyridine
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
DJ9 'Create component' 2018-01-24 RCSB
DJ9 'Initial release' 2019-07-10 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
DJ9 C1 C 5.598 -5.170 1
DJ9 C10 C 8.196 3.829 2
DJ9 C11 C 10.491 3.079 3
DJ9 C12 C 11.991 3.079 4
DJ9 C13 C 12.741 1.780 5
DJ9 C14 C 14.241 1.780 6
DJ9 C15 C 16.603 1.282 7
DJ9 C16 C 16.449 2.766 8
DJ9 C17 C 14.991 3.079 9
DJ9 C18 C 14.241 4.378 10
DJ9 C19 C 12.741 4.378 11
DJ9 C2 C 6.897 -2.921 12
DJ9 C20 C 8.196 2.329 13
DJ9 C21 C 5.598 -0.670 14
DJ9 C22 C 5.598 -2.171 15
DJ9 C23 C 3.000 -2.171 16
DJ9 C3 C 8.196 -2.171 17
DJ9 C4 C 9.495 -4.420 18
DJ9 C5 C 8.196 -0.670 19
DJ9 C6 C 6.897 0.080 20
DJ9 C7 C 6.897 1.579 21
DJ9 C8 C 5.598 3.829 22
DJ9 C9 C 6.897 4.580 23
DJ9 N1 N 5.598 2.329 24
DJ9 N2 N 9.616 4.287 25
DJ9 N3 N 15.242 0.675 26
DJ9 N4 N 9.616 1.872 27
DJ9 O1 O 6.897 -4.420 28
DJ9 O2 O 9.495 -2.921 29
DJ9 O3 O 4.299 -2.921 30
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
DJ9 C15 N3 SINGLE NONE 1
DJ9 C15 C16 DOUBLE NONE 2
DJ9 N3 C14 SINGLE NONE 3
DJ9 C16 C17 SINGLE NONE 4
DJ9 C14 C17 SINGLE NONE 5
DJ9 C14 C13 DOUBLE NONE 6
DJ9 C17 C18 DOUBLE NONE 7
DJ9 C13 C12 SINGLE NONE 8
DJ9 C18 C19 SINGLE NONE 9
DJ9 C12 C19 DOUBLE NONE 10
DJ9 C12 C11 SINGLE NONE 11
DJ9 N2 C11 SINGLE NONE 12
DJ9 N2 C10 SINGLE NONE 13
DJ9 C11 N4 DOUBLE NONE 14
DJ9 C10 C9 SINGLE NONE 15
DJ9 C10 C20 DOUBLE NONE 16
DJ9 C9 C8 DOUBLE NONE 17
DJ9 N4 C20 SINGLE NONE 18
DJ9 C20 C7 SINGLE NONE 19
DJ9 C8 N1 SINGLE NONE 20
DJ9 C7 N1 DOUBLE NONE 21
DJ9 C7 C6 SINGLE NONE 22
DJ9 C23 O3 SINGLE NONE 23
DJ9 C21 C6 DOUBLE NONE 24
DJ9 C21 C22 SINGLE NONE 25
DJ9 C6 C5 SINGLE NONE 26
DJ9 O3 C22 SINGLE NONE 27
DJ9 C22 C2 DOUBLE NONE 28
DJ9 C5 C3 DOUBLE NONE 29
DJ9 C2 C3 SINGLE NONE 30
DJ9 C2 O1 SINGLE NONE 31
DJ9 C3 O2 SINGLE NONE 32
DJ9 C1 O1 SINGLE NONE 33
DJ9 O2 C4 SINGLE NONE 34
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
DJ9 MurckoScaffold S1 scaffold 'c1ccc(-c2nccc3[nH]c(-c4ccc5cc[nH]c5c4)nc23)cc1' InChI=1S/C20H14N4/c1-2-4-14(5-3-1)18-19-16(9-11-22-18)23-20(24-19)15-7-6-13-8-10-21-17(13)12-15/h1-12,21H,(H,23,24) KLOKCLBHUAWKPE-UHFFFAOYSA-N
DJ9 imidazole F1 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
DJ9 indole F2 fragment 'c1ccc2[nH]ccc2c1' InChI=1S/C8H7N/c1-2-4-8-7(3-1)5-6-9-8/h1-6,9H SIKJAQJRHWYJAI-UHFFFAOYSA-N
DJ9 phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
DJ9 pyridine F4 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
DJ9 pyrrole F5 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
DJ9 C10 S1 1
DJ9 C11 S1 1
DJ9 C12 S1 1
DJ9 C13 S1 1
DJ9 C14 S1 1
DJ9 C15 S1 1
DJ9 C16 S1 1
DJ9 C17 S1 1
DJ9 C18 S1 1
DJ9 C19 S1 1
DJ9 C2 S1 1
DJ9 C20 S1 1
DJ9 C21 S1 1
DJ9 C22 S1 1
DJ9 C3 S1 1
DJ9 C5 S1 1
DJ9 C6 S1 1
DJ9 C7 S1 1
DJ9 C8 S1 1
DJ9 C9 S1 1
DJ9 N1 S1 1
DJ9 N2 S1 1
DJ9 N3 S1 1
DJ9 N4 S1 1
DJ9 C10 F1 1
DJ9 C20 F1 1
DJ9 N4 F1 1
DJ9 C11 F1 1
DJ9 N2 F1 1
DJ9 C14 F2 1
DJ9 C17 F2 1
DJ9 C16 F2 1
DJ9 C15 F2 1
DJ9 N3 F2 1
DJ9 C18 F2 1
DJ9 C19 F2 1
DJ9 C12 F2 1
DJ9 C13 F2 1
DJ9 C12 F3 1
DJ9 C13 F3 1
DJ9 C14 F3 1
DJ9 C17 F3 1
DJ9 C18 F3 1
DJ9 C19 F3 1
DJ9 C2 F3 2
DJ9 C22 F3 2
DJ9 C21 F3 2
DJ9 C6 F3 2
DJ9 C5 F3 2
DJ9 C3 F3 2
DJ9 C7 F4 1
DJ9 C20 F4 1
DJ9 C10 F4 1
DJ9 C9 F4 1
DJ9 C8 F4 1
DJ9 N1 F4 1
DJ9 C14 F5 1
DJ9 C17 F5 1
DJ9 C16 F5 1
DJ9 C15 F5 1
DJ9 N3 F5 1
#
_pdbe_chem_comp_rdkit_properties.comp_id DJ9
_pdbe_chem_comp_rdkit_properties.exactmw 400.154
_pdbe_chem_comp_rdkit_properties.amw 400.438
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 7
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 5
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 30
_pdbe_chem_comp_rdkit_properties.NumAtoms 50
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 7
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.130
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 5
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 200.418
_pdbe_chem_comp_rdkit_properties.tpsa 85.050
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.795
_pdbe_chem_comp_rdkit_properties.CrippenMR 107.387
_pdbe_chem_comp_rdkit_properties.chi0v 14.514
_pdbe_chem_comp_rdkit_properties.chi1v 8.014
_pdbe_chem_comp_rdkit_properties.chi2v 4.023
_pdbe_chem_comp_rdkit_properties.chi3v 4.023
_pdbe_chem_comp_rdkit_properties.chi4v 2.723
_pdbe_chem_comp_rdkit_properties.chi0n 34.514
_pdbe_chem_comp_rdkit_properties.chi1n 17.908
_pdbe_chem_comp_rdkit_properties.chi2n 4.023
_pdbe_chem_comp_rdkit_properties.chi3n 4.023
_pdbe_chem_comp_rdkit_properties.chi4n 2.723
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -4
_pdbe_chem_comp_rdkit_properties.kappa1 6.500
_pdbe_chem_comp_rdkit_properties.kappa2 7.111
_pdbe_chem_comp_rdkit_properties.kappa3 2.828
_pdbe_chem_comp_rdkit_properties.Phi 1.541
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
DJ9 UniChem ZINC ZINC000473170917
DJ9 UniChem PubChem 122195228
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
DJ9 C1 -4.740 3.212 0.276 ETKDGv3 1
DJ9 C10 1.228 -3.179 0.648 ETKDGv3 2
DJ9 C11 2.333 -1.359 0.052 ETKDGv3 3
DJ9 C12 3.406 -0.409 -0.323 ETKDGv3 4
DJ9 C13 3.054 1.019 -0.612 ETKDGv3 5
DJ9 C14 4.043 1.849 -0.943 ETKDGv3 6
DJ9 C15 5.316 3.616 -1.530 ETKDGv3 7
DJ9 C16 6.178 2.597 -1.409 ETKDGv3 8
DJ9 C17 5.409 1.420 -1.029 ETKDGv3 9
DJ9 C18 5.774 0.163 -0.782 ETKDGv3 10
DJ9 C19 4.706 -0.804 -0.407 ETKDGv3 11
DJ9 C2 -3.917 0.831 0.173 ETKDGv3 12
DJ9 C20 0.391 -2.180 0.514 ETKDGv3 13
DJ9 C21 -3.264 -1.527 -0.014 ETKDGv3 14
DJ9 C22 -4.242 -0.423 -0.189 ETKDGv3 15
DJ9 C23 -5.987 -1.928 -1.158 ETKDGv3 16
DJ9 C3 -2.567 1.104 0.768 ETKDGv3 17
DJ9 C4 -0.976 2.815 1.696 ETKDGv3 18
DJ9 C5 -1.699 0.084 0.924 ETKDGv3 19
DJ9 C6 -2.045 -1.291 0.498 ETKDGv3 20
DJ9 C7 -1.066 -2.396 0.647 ETKDGv3 21
DJ9 C8 -0.564 -4.730 1.041 ETKDGv3 22
DJ9 C9 0.762 -4.543 0.927 ETKDGv3 23
DJ9 N1 -1.478 -3.616 0.890 ETKDGv3 24
DJ9 N2 2.544 -2.742 0.373 ETKDGv3 25
DJ9 N3 3.963 3.229 -1.254 ETKDGv3 26
DJ9 N4 1.083 -1.001 0.119 ETKDGv3 27
DJ9 O1 -4.885 1.831 -0.031 ETKDGv3 28
DJ9 O2 -2.232 2.411 1.158 ETKDGv3 29
DJ9 O3 -5.515 -0.653 -0.734 ETKDGv3 30
DJ9 H1 -3.902 3.649 -0.307 ETKDGv3 31
DJ9 H2 -4.581 3.349 1.366 ETKDGv3 32
DJ9 H3 -5.673 3.742 -0.007 ETKDGv3 33
DJ9 H4 2.034 1.377 -0.554 ETKDGv3 34
DJ9 H5 5.603 4.622 -1.804 ETKDGv3 35
DJ9 H6 7.247 2.651 -1.568 ETKDGv3 36
DJ9 H7 6.809 -0.144 -0.850 ETKDGv3 37
DJ9 H8 4.999 -1.823 -0.205 ETKDGv3 38
DJ9 H9 -3.528 -2.528 -0.327 ETKDGv3 39
DJ9 H10 -5.996 -2.635 -0.302 ETKDGv3 40
DJ9 H11 -5.344 -2.321 -1.974 ETKDGv3 41
DJ9 H12 -7.022 -1.821 -1.542 ETKDGv3 42
DJ9 H13 -0.996 3.908 1.881 ETKDGv3 43
DJ9 H14 -0.161 2.593 0.974 ETKDGv3 44
DJ9 H15 -0.788 2.297 2.659 ETKDGv3 45
DJ9 H16 -0.742 0.252 1.393 ETKDGv3 46
DJ9 H17 -0.955 -5.719 1.242 ETKDGv3 47
DJ9 H18 1.458 -5.366 1.026 ETKDGv3 48
DJ9 H19 3.415 -3.316 0.346 ETKDGv3 49
DJ9 H20 3.111 3.832 -1.278 ETKDGv3 50
#