data_D3J
#
_chem_comp.id D3J
_chem_comp.name
"(2R)-5-[(2-chlorophenyl)sulfanyl]-6'-(4-fluorophenoxy)-4-hydroxy-2-(thiophen-3-yl)-2,3-dihydro[2,2'-bipyridin]-6(1H)-one"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C26 H18 Cl F N2 O3 S2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2017-10-17
_chem_comp.pdbx_modified_date 2018-10-19
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 525.014
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code D3J
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6BB1
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
D3J C4 C1 C 0 1 Y N N N N N 14.596 39.870 170.282 -1.350 4.631 0.688 C4 D3J 1
D3J C14 C2 C 0 1 N N N N N N 11.869 42.600 176.537 0.558 -0.382 -0.689 C14 D3J 2
D3J C5 C3 C 0 1 Y N N N N N 16.734 38.377 171.305 -2.220 3.294 -1.576 C5 D3J 3
D3J C6 C4 C 0 1 Y N N N N N 15.427 38.104 171.709 -2.244 2.658 -0.350 C6 D3J 4
D3J C11 C5 C 0 1 Y N N N N N 11.908 41.407 173.519 -1.995 -0.714 1.105 C11 D3J 5
D3J C7 C6 C 0 1 Y N N N N N 14.351 38.863 171.223 -1.814 3.327 0.787 C7 D3J 6
D3J C9 C7 C 0 1 Y N N N N N 12.252 39.425 172.294 -2.181 1.392 2.027 C9 D3J 7
D3J C12 C8 C 0 1 N N R N N N 12.481 42.682 174.153 -1.427 -1.605 0.030 C12 D3J 8
D3J C3 C9 C 0 1 Y N N N N N 15.900 40.153 169.886 -1.322 5.262 -0.540 C3 D3J 9
D3J F1 F1 F 0 1 N N N N N N 18.223 39.684 169.986 -1.728 5.213 -2.873 F1 D3J 10
D3J C2 C10 C 0 1 Y N N N N N 16.965 39.411 170.396 -1.757 4.595 -1.673 C2 D3J 11
D3J O8 O1 O 0 1 N N N N N N 13.075 38.558 171.622 -1.847 2.707 1.995 O8 D3J 12
D3J N10 N1 N 0 1 Y N N N N N 12.710 40.538 172.889 -1.700 0.572 1.107 N10 D3J 13
D3J N13 N2 N 0 1 N N N N N N 11.657 43.100 175.303 -0.704 -0.779 -0.937 N13 D3J 14
D3J C15 C11 C 0 1 N N N N N N 12.951 41.633 176.738 1.263 -0.893 0.490 C15 D3J 15
D3J S16 S1 S 0 1 N N N N N N 12.909 40.603 178.169 2.756 -0.130 1.032 S16 D3J 16
D3J C17 C12 C 0 1 Y N N N N N 12.145 39.094 177.656 3.898 -0.543 -0.245 C17 D3J 17
D3J C18 C13 C 0 1 Y N N N N N 11.610 38.258 178.652 5.237 -0.188 -0.124 C18 D3J 18
D3J C19 C14 C 0 1 Y N N N N N 10.964 37.077 178.282 6.130 -0.514 -1.127 C19 D3J 19
D3J C20 C15 C 0 1 Y N N N N N 10.846 36.729 176.936 5.692 -1.193 -2.250 C20 D3J 20
D3J C21 C16 C 0 1 Y N N N N N 11.392 37.553 175.948 4.361 -1.548 -2.373 C21 D3J 21
D3J C22 C17 C 0 1 Y N N N N N 12.051 38.728 176.302 3.464 -1.230 -1.372 C22 D3J 22
D3J CL23 CL1 CL 0 0 N N N N N N 11.769 38.712 180.337 5.786 0.665 1.285 CL23 D3J 23
D3J C24 C18 C 0 1 N N N N N N 13.949 41.579 175.818 0.761 -1.951 1.157 C24 D3J 24
D3J O25 O2 O 0 1 N N N N N N 14.962 40.707 175.920 1.382 -2.405 2.268 O25 D3J 25
D3J C26 C19 C 0 1 N N N N N N 13.926 42.468 174.611 -0.492 -2.625 0.664 C26 D3J 26
D3J O27 O3 O 0 1 N N N N N N 11.179 42.943 177.469 1.113 0.395 -1.443 O27 D3J 27
D3J C28 C20 C 0 1 Y N N N N N 12.525 43.834 173.179 -2.552 -2.325 -0.667 C28 D3J 28
D3J C29 C21 C 0 1 Y N N N N N 12.202 43.683 171.894 -3.012 -3.508 -0.255 C29 D3J 29
D3J S30 S2 S 0 1 Y N N N N N 12.363 45.224 171.090 -4.323 -4.029 -1.305 S30 D3J 30
D3J C31 C22 C 0 1 Y N N N N N 12.898 46.016 172.569 -4.169 -2.569 -2.273 C31 D3J 31
D3J C32 C23 C 0 1 Y N N N N N 12.914 45.121 173.551 -3.191 -1.807 -1.781 C32 D3J 32
D3J C33 C24 C 0 1 Y N N N N N 10.534 41.142 173.581 -2.822 -1.253 2.070 C33 D3J 33
D3J C34 C25 C 0 1 Y N N N N N 10.010 39.984 172.996 -3.342 -0.427 3.057 C34 D3J 34
D3J C35 C26 C 0 1 Y N N N N N 10.885 39.119 172.348 -3.010 0.917 3.035 C35 D3J 35
D3J H1 H1 H 0 1 N N N N N N 13.772 40.428 169.863 -1.016 5.154 1.572 H1 D3J 36
D3J H2 H2 H 0 1 N N N N N N 17.558 37.795 171.691 -2.555 2.773 -2.461 H2 D3J 37
D3J H3 H3 H 0 1 N N N N N N 15.241 37.299 172.404 -2.598 1.640 -0.276 H3 D3J 38
D3J H4 H4 H 0 1 N N N N N N 16.088 40.950 169.182 -0.961 6.277 -0.617 H4 D3J 39
D3J H5 H5 H 0 1 N N N N N N 10.926 43.768 175.164 -1.138 -0.515 -1.763 H5 D3J 40
D3J H6 H6 H 0 1 N N N N N N 10.553 36.429 179.042 7.170 -0.239 -1.034 H6 D3J 41
D3J H7 H7 H 0 1 N N N N N N 10.332 35.821 176.657 6.392 -1.446 -3.033 H7 D3J 42
D3J H8 H8 H 0 1 N N N N N N 11.303 37.278 174.907 4.024 -2.082 -3.249 H8 D3J 43
D3J H9 H9 H 0 1 N N N N N N 12.488 39.355 175.539 2.425 -1.508 -1.469 H9 D3J 44
D3J H10 H10 H 0 1 N N N N N N 14.868 40.204 176.720 2.131 -1.863 2.550 H10 D3J 45
D3J H11 H11 H 0 1 N N N N N N 14.500 41.997 173.800 -0.999 -3.111 1.498 H11 D3J 46
D3J H12 H12 H 0 1 N N N N N N 14.377 43.439 174.864 -0.221 -3.377 -0.078 H12 D3J 47
D3J H13 H13 H 0 1 N N N N N N 11.892 42.760 171.428 -2.636 -4.061 0.593 H13 D3J 48
D3J H14 H14 H 0 1 N N N N N N 13.168 47.057 172.663 -4.774 -2.326 -3.134 H14 D3J 49
D3J H15 H15 H 0 1 N N N N N N 13.206 45.371 174.560 -2.921 -0.856 -2.215 H15 D3J 50
D3J H16 H16 H 0 1 N N N N N N 9.875 41.835 174.083 -3.062 -2.306 2.058 H16 D3J 51
D3J H17 H17 H 0 1 N N N N N N 8.953 39.768 173.046 -3.992 -0.823 3.823 H17 D3J 52
D3J H18 H18 H 0 1 N N N N N N 10.513 38.215 171.888 -3.400 1.589 3.785 H18 D3J 53
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
D3J C3 C4 DOUB Y N 1
D3J C3 C2 SING Y N 2
D3J F1 C2 SING N N 3
D3J C4 C7 SING Y N 4
D3J C2 C5 DOUB Y N 5
D3J S30 C29 SING Y N 6
D3J S30 C31 SING Y N 7
D3J C7 O8 SING N N 8
D3J C7 C6 DOUB Y N 9
D3J C5 C6 SING Y N 10
D3J O8 C9 SING N N 11
D3J C29 C28 DOUB Y N 12
D3J C9 C35 DOUB Y N 13
D3J C9 N10 SING Y N 14
D3J C35 C34 SING Y N 15
D3J C31 C32 DOUB Y N 16
D3J N10 C11 DOUB Y N 17
D3J C34 C33 DOUB Y N 18
D3J C28 C32 SING Y N 19
D3J C28 C12 SING N N 20
D3J C11 C33 SING Y N 21
D3J C11 C12 SING N N 22
D3J C12 C26 SING N N 23
D3J C12 N13 SING N N 24
D3J C26 C24 SING N N 25
D3J N13 C14 SING N N 26
D3J C24 O25 SING N N 27
D3J C24 C15 DOUB N N 28
D3J C21 C22 DOUB Y N 29
D3J C21 C20 SING Y N 30
D3J C22 C17 SING Y N 31
D3J C14 C15 SING N N 32
D3J C14 O27 DOUB N N 33
D3J C15 S16 SING N N 34
D3J C20 C19 DOUB Y N 35
D3J C17 S16 SING N N 36
D3J C17 C18 DOUB Y N 37
D3J C19 C18 SING Y N 38
D3J C18 CL23 SING N N 39
D3J C4 H1 SING N N 40
D3J C5 H2 SING N N 41
D3J C6 H3 SING N N 42
D3J C3 H4 SING N N 43
D3J N13 H5 SING N N 44
D3J C19 H6 SING N N 45
D3J C20 H7 SING N N 46
D3J C21 H8 SING N N 47
D3J C22 H9 SING N N 48
D3J O25 H10 SING N N 49
D3J C26 H11 SING N N 50
D3J C26 H12 SING N N 51
D3J C29 H13 SING N N 52
D3J C31 H14 SING N N 53
D3J C32 H15 SING N N 54
D3J C33 H16 SING N N 55
D3J C34 H17 SING N N 56
D3J C35 H18 SING N N 57
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
D3J SMILES ACDLabs 12.01 c1c(ccc(c1)F)Oc5cccc(C2(CC(=C(C(=O)N2)Sc3c(Cl)cccc3)O)c4ccsc4)n5
D3J InChI InChI 1.03 InChI=1S/C26H18ClFN2O3S2/c27-19-4-1-2-5-21(19)35-24-20(31)14-26(30-25(24)32,16-12-13-34-15-16)22-6-3-7-23(29-22)33-18-10-8-17(28)9-11-18/h1-13,15,31H,14H2,(H,30,32)/t26-/m1/s1
D3J InChIKey InChI 1.03 XFNQOQKMMIFYDK-AREMUKBSSA-N
D3J SMILES_CANONICAL CACTVS 3.385 OC1=C(Sc2ccccc2Cl)C(=O)N[C@](C1)(c3cscc3)c4cccc(Oc5ccc(F)cc5)n4
D3J SMILES CACTVS 3.385 OC1=C(Sc2ccccc2Cl)C(=O)N[C](C1)(c3cscc3)c4cccc(Oc5ccc(F)cc5)n4
D3J SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 c1ccc(c(c1)SC2=C(C[C@@](NC2=O)(c3ccsc3)c4cccc(n4)Oc5ccc(cc5)F)O)Cl
D3J SMILES "OpenEye OEToolkits" 2.0.6 c1ccc(c(c1)SC2=C(CC(NC2=O)(c3ccsc3)c4cccc(n4)Oc5ccc(cc5)F)O)Cl
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
D3J "SYSTEMATIC NAME" ACDLabs 12.01 "(2R)-5-[(2-chlorophenyl)sulfanyl]-6'-(4-fluorophenoxy)-4-hydroxy-2-(thiophen-3-yl)-2,3-dihydro[2,2'-bipyridin]-6(1H)-one"
D3J "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 (2~{R})-5-(2-chlorophenyl)sulfanyl-2-[6-(4-fluoranylphenoxy)pyridin-2-yl]-4-oxidanyl-2-thiophen-3-yl-1,3-dihydropyridin-6-one
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
D3J 'Create component' 2017-10-17 RCSB
D3J 'Initial release' 2018-10-24 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
D3J C4 C 5.038 -2.724 1
D3J C14 C 14.012 0.879 2
D3J C5 C 5.559 -5.678 3
D3J C6 C 6.708 -4.714 4
D3J C11 C 11.564 -2.335 5
D3J C7 C 6.447 -3.237 6
D3J C9 C 9.006 -2.786 7
D3J C12 C 12.713 -1.371 8
D3J C3 C 3.889 -3.688 9
D3J F1 F 3.000 -6.129 10
D3J C2 C 4.149 -5.165 11
D3J O8 O 7.596 -2.273 12
D3J N10 N 10.155 -1.822 13
D3J N13 N 14.012 -0.621 14
D3J C15 C 12.713 1.629 15
D3J S16 S 12.713 3.130 16
D3J C17 C 11.414 3.880 17
D3J C18 C 11.414 5.380 18
D3J C19 C 10.115 6.129 19
D3J C20 C 8.816 5.380 20
D3J C21 C 8.816 3.880 21
D3J C22 C 10.115 3.130 22
D3J CL23 Cl 12.713 6.129 23
D3J C24 C 11.414 0.879 24
D3J O25 O 10.115 1.629 25
D3J C26 C 11.414 -0.621 26
D3J O27 O 15.312 1.629 27
D3J C28 C 13.463 -2.670 28
D3J C29 C 12.853 -4.040 29
D3J S30 S 13.968 -5.044 30
D3J C31 C 15.267 -4.294 31
D3J C32 C 14.955 -2.826 32
D3J C33 C 11.825 -3.812 33
D3J C34 C 10.676 -4.776 34
D3J C35 C 9.266 -4.263 35
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
D3J C3 C4 DOUBLE NONE 1
D3J C3 C2 SINGLE NONE 2
D3J F1 C2 SINGLE NONE 3
D3J C4 C7 SINGLE NONE 4
D3J C2 C5 DOUBLE NONE 5
D3J S30 C29 SINGLE NONE 6
D3J S30 C31 SINGLE NONE 7
D3J C7 O8 SINGLE NONE 8
D3J C7 C6 DOUBLE NONE 9
D3J C5 C6 SINGLE NONE 10
D3J O8 C9 SINGLE NONE 11
D3J C29 C28 DOUBLE NONE 12
D3J C9 C35 SINGLE NONE 13
D3J C9 N10 DOUBLE NONE 14
D3J C35 C34 DOUBLE NONE 15
D3J C31 C32 DOUBLE NONE 16
D3J N10 C11 SINGLE NONE 17
D3J C34 C33 SINGLE NONE 18
D3J C28 C32 SINGLE NONE 19
D3J C12 C28 SINGLE BEGINWEDGE 20
D3J C11 C33 DOUBLE NONE 21
D3J C11 C12 SINGLE NONE 22
D3J C12 C26 SINGLE NONE 23
D3J C12 N13 SINGLE NONE 24
D3J C26 C24 SINGLE NONE 25
D3J N13 C14 SINGLE NONE 26
D3J C24 O25 SINGLE NONE 27
D3J C24 C15 DOUBLE NONE 28
D3J C21 C22 DOUBLE NONE 29
D3J C21 C20 SINGLE NONE 30
D3J C22 C17 SINGLE NONE 31
D3J C14 C15 SINGLE NONE 32
D3J C14 O27 DOUBLE NONE 33
D3J C15 S16 SINGLE NONE 34
D3J C20 C19 DOUBLE NONE 35
D3J C17 S16 SINGLE NONE 36
D3J C17 C18 DOUBLE NONE 37
D3J C19 C18 SINGLE NONE 38
D3J C18 CL23 SINGLE NONE 39
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
D3J MurckoScaffold S1 scaffold 'O=C1N[C@](c2ccsc2)(c2cccc(Oc3ccccc3)n2)CC=C1Sc1ccccc1' InChI=1S/C26H20N2O2S2/c29-25-22(32-21-10-5-2-6-11-21)14-16-26(28-25,19-15-17-31-18-19)23-12-7-13-24(27-23)30-20-8-3-1-4-9-20/h1-15,17-18H,16H2,(H,28,29)/t26-/m1/s1 HYBRNFWBTLCBRE-AREMUKBSSA-N
D3J amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
D3J phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
D3J pyridine F3 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
D3J thiophen F4 fragment c1ccsc1 InChI=1S/C4H4S/c1-2-4-5-3-1/h1-4H YTPLMLYBLZKORZ-UHFFFAOYSA-N
D3J Z1603775714 F5 fragment CNCc1cccc(OC)n1 InChI=1S/C8H12N2O/c1-9-6-7-4-3-5-8(10-7)11-2/h3-5,9H,6H2,1-2H3 ZCDSYDMWOVSOBD-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
D3J C4 S1 1
D3J C14 S1 1
D3J C5 S1 1
D3J C6 S1 1
D3J C11 S1 1
D3J C7 S1 1
D3J C9 S1 1
D3J C12 S1 1
D3J C3 S1 1
D3J C2 S1 1
D3J O8 S1 1
D3J N10 S1 1
D3J N13 S1 1
D3J C15 S1 1
D3J S16 S1 1
D3J C17 S1 1
D3J C18 S1 1
D3J C19 S1 1
D3J C20 S1 1
D3J C21 S1 1
D3J C22 S1 1
D3J C24 S1 1
D3J C26 S1 1
D3J O27 S1 1
D3J C28 S1 1
D3J C29 S1 1
D3J S30 S1 1
D3J C31 S1 1
D3J C32 S1 1
D3J C33 S1 1
D3J C34 S1 1
D3J C35 S1 1
D3J N13 F1 1
D3J C14 F1 1
D3J O27 F1 1
D3J C15 F1 1
D3J C4 F2 1
D3J C3 F2 1
D3J C2 F2 1
D3J C5 F2 1
D3J C6 F2 1
D3J C7 F2 1
D3J C17 F2 2
D3J C22 F2 2
D3J C21 F2 2
D3J C20 F2 2
D3J C19 F2 2
D3J C18 F2 2
D3J C11 F3 1
D3J C33 F3 1
D3J C34 F3 1
D3J C35 F3 1
D3J C9 F3 1
D3J N10 F3 1
D3J C29 F4 1
D3J C28 F4 1
D3J C32 F4 1
D3J C31 F4 1
D3J S30 F4 1
D3J C14 F5 1
D3J N13 F5 1
D3J C12 F5 1
D3J C11 F5 1
D3J C33 F5 1
D3J C34 F5 1
D3J C35 F5 1
D3J C9 F5 1
D3J O8 F5 1
D3J C7 F5 1
D3J N10 F5 1
#
_pdbe_chem_comp_rdkit_properties.comp_id D3J
_pdbe_chem_comp_rdkit_properties.exactmw 524.043
_pdbe_chem_comp_rdkit_properties.amw 525.026
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 5
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 7
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 6
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 35
_pdbe_chem_comp_rdkit_properties.NumAtoms 53
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 9
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.077
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 239.237
_pdbe_chem_comp_rdkit_properties.tpsa 71.450
_pdbe_chem_comp_rdkit_properties.CrippenClogP 5.911
_pdbe_chem_comp_rdkit_properties.CrippenMR 134.351
_pdbe_chem_comp_rdkit_properties.chi0v 19.081
_pdbe_chem_comp_rdkit_properties.chi1v 11.166
_pdbe_chem_comp_rdkit_properties.chi2v 6.177
_pdbe_chem_comp_rdkit_properties.chi3v 6.177
_pdbe_chem_comp_rdkit_properties.chi4v 4.182
_pdbe_chem_comp_rdkit_properties.chi0n 34.692
_pdbe_chem_comp_rdkit_properties.chi1n 18.011
_pdbe_chem_comp_rdkit_properties.chi2n 4.197
_pdbe_chem_comp_rdkit_properties.chi3n 4.197
_pdbe_chem_comp_rdkit_properties.chi4n 2.744
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.330
_pdbe_chem_comp_rdkit_properties.kappa1 10.342
_pdbe_chem_comp_rdkit_properties.kappa2 9.732
_pdbe_chem_comp_rdkit_properties.kappa3 4.774
_pdbe_chem_comp_rdkit_properties.Phi 2.876
#
_pdbe_chem_comp_external_mappings.comp_id D3J
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PubChem
_pdbe_chem_comp_external_mappings.resource_id 134821711
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
D3J C4 5.477 1.007 0.569 ETKDGv3 1
D3J C14 -2.304 -1.058 1.119 ETKDGv3 2
D3J C5 6.145 3.595 1.458 ETKDGv3 3
D3J C6 4.726 3.210 1.308 ETKDGv3 4
D3J C11 0.809 -1.253 0.349 ETKDGv3 5
D3J C7 4.397 1.974 0.905 ETKDGv3 6
D3J C9 2.509 0.359 0.913 ETKDGv3 7
D3J C12 -0.432 -1.579 -0.483 ETKDGv3 8
D3J C3 6.762 1.360 0.703 ETKDGv3 9
D3J F1 8.415 3.067 1.313 ETKDGv3 10
D3J C2 7.113 2.715 1.176 ETKDGv3 11
D3J O8 3.042 1.645 0.764 ETKDGv3 12
D3J N10 1.438 0.042 0.245 ETKDGv3 13
D3J N13 -1.495 -2.020 0.432 ETKDGv3 14
D3J C15 -2.255 0.360 0.712 ETKDGv3 15
D3J S16 -3.075 1.607 1.725 ETKDGv3 16
D3J C17 -4.630 1.511 0.819 ETKDGv3 17
D3J C18 -4.958 2.412 -0.131 ETKDGv3 18
D3J C19 -6.243 2.283 -0.854 ETKDGv3 19
D3J C20 -7.090 1.292 -0.555 ETKDGv3 20
D3J C21 -6.751 0.327 0.507 ETKDGv3 21
D3J C22 -5.589 0.434 1.163 ETKDGv3 22
D3J CL23 -3.930 3.786 -0.514 ETKDGv3 23
D3J C24 -1.544 0.711 -0.371 ETKDGv3 24
D3J O25 -1.397 2.056 -0.702 ETKDGv3 25
D3J C26 -0.939 -0.342 -1.273 ETKDGv3 26
D3J O27 -3.025 -1.424 2.084 ETKDGv3 27
D3J C28 -0.122 -2.679 -1.494 ETKDGv3 28
D3J C29 1.034 -2.756 -2.166 ETKDGv3 29
D3J S30 0.957 -4.086 -3.342 ETKDGv3 30
D3J C31 -0.715 -4.492 -2.907 ETKDGv3 31
D3J C32 -1.134 -3.671 -1.949 ETKDGv3 32
D3J C33 1.347 -2.174 1.172 ETKDGv3 33
D3J C34 2.545 -1.837 1.962 ETKDGv3 34
D3J C35 3.102 -0.629 1.847 ETKDGv3 35
D3J H1 5.234 0.022 0.193 ETKDGv3 36
D3J H2 6.397 4.591 1.799 ETKDGv3 37
D3J H3 3.952 3.931 1.537 ETKDGv3 38
D3J H4 7.546 0.656 0.454 ETKDGv3 39
D3J H5 -1.519 -3.012 0.763 ETKDGv3 40
D3J H6 -6.501 2.996 -1.627 ETKDGv3 41
D3J H7 -8.030 1.201 -1.085 ETKDGv3 42
D3J H8 -7.447 -0.462 0.761 ETKDGv3 43
D3J H9 -5.358 -0.267 1.954 ETKDGv3 44
D3J H10 -0.885 2.344 -1.527 ETKDGv3 45
D3J H11 -0.113 0.096 -1.875 ETKDGv3 46
D3J H12 -1.731 -0.656 -1.989 ETKDGv3 47
D3J H13 1.880 -2.094 -2.035 ETKDGv3 48
D3J H14 -1.315 -5.271 -3.358 ETKDGv3 49
D3J H15 -2.139 -3.724 -1.550 ETKDGv3 50
D3J H16 0.914 -3.161 1.264 ETKDGv3 51
D3J H17 2.965 -2.568 2.641 ETKDGv3 52
D3J H18 3.963 -0.375 2.450 ETKDGv3 53
#