data_CZ8
#
_chem_comp.id CZ8
_chem_comp.name
'({[(2R)-2-{[(4-ethyl-2,3-dioxopiperazin-1-yl)carbonyl]amino}-4-(4-hydroxyphenyl)butanoyl]amino}methyl)boronic acid'
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula 'C18 H25 B N4 O7'
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2010-07-30
_chem_comp.pdbx_modified_date 2024-09-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 420.225
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code CZ8
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3MXR
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
_chem_comp.pdbx_pcm Y
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
CZ8 C C C 0 1 N N N N N N 31.349 65.188 4.215 0.970 2.298 -0.363 C CZ8 1
CZ8 N N N 0 1 N N N N N N 30.865 67.484 4.665 -0.460 0.343 -0.220 N CZ8 2
CZ8 O O O 0 1 N N N N N N 30.293 65.044 3.591 0.173 2.813 0.393 O CZ8 3
CZ8 CA CA C 0 1 N N R N N N 31.961 66.555 4.424 0.762 0.878 -0.824 CA CZ8 4
CZ8 CB CB C 0 1 N N N N N N 32.699 66.989 3.165 1.958 0.023 -0.400 CB CZ8 5
CZ8 CAA CAA C 0 1 N N N N N N 25.336 71.775 6.796 -6.223 -2.938 1.398 CAA CZ8 6
CZ8 OAC OAC O 0 1 N N N N N N 32.117 68.676 6.115 -1.730 1.294 -1.774 OAC CZ8 7
CZ8 OAD OAD O 0 1 N N N N N N 27.322 71.059 4.087 -6.218 -0.477 -0.945 OAD CZ8 8
CZ8 OAE OAE O 0 1 N N N N N N 28.874 68.913 3.746 -3.991 0.685 -2.026 OAE CZ8 9
CZ8 OAF OAF O 0 1 N N N N N N 36.896 68.296 -1.400 6.208 -4.535 0.586 OAF CZ8 10
CZ8 OAG OAG O 0 1 N N N N N N 33.568 62.308 6.229 3.727 3.167 1.400 OAG CZ8 11
CZ8 OAH OAH O 0 1 N N N N N N 31.264 62.236 7.153 3.554 5.618 1.512 OAH CZ8 12
CZ8 CAI CAI C 0 1 Y N N N N N 35.050 67.065 -0.530 4.010 -3.726 1.005 CAI CZ8 13
CZ8 CAJ CAJ C 0 1 Y N N N N N 36.658 68.077 0.964 5.195 -3.048 -0.971 CAJ CZ8 14
CZ8 CAK CAK C 0 1 Y N N N N N 34.347 66.568 0.564 2.932 -2.952 0.620 CAK CZ8 15
CZ8 CAL CAL C 0 1 Y N N N N N 35.953 67.582 2.061 4.115 -2.276 -1.351 CAL CZ8 16
CZ8 CAM CAM C 0 1 N N N N N N 26.272 70.590 6.675 -6.320 -1.423 1.588 CAM CZ8 17
CZ8 CAN CAN C 0 1 N N N N N N 34.048 66.293 3.055 1.806 -1.386 -0.975 CAN CZ8 18
CZ8 CAP CAP C 0 1 N N N N N N 31.554 62.746 4.633 2.242 4.376 -0.345 CAP CZ8 19
CZ8 CAQ CAQ C 0 1 N N N N N N 28.546 70.652 7.353 -3.946 -0.557 1.782 CAQ CZ8 20
CZ8 CAR CAR C 0 1 N N N N N N 29.896 70.027 7.024 -2.695 -0.780 0.937 CAR CZ8 21
CZ8 NAS NAS N 0 1 N N N N N N 31.979 64.137 4.721 2.039 2.997 -0.793 NAS CZ8 22
CZ8 CAV CAV C 0 1 N N N N N N 31.049 68.503 5.524 -1.655 0.570 -0.800 CAV CZ8 23
CZ8 CAW CAW C 0 1 N N N N N N 27.920 70.583 5.047 -5.189 -0.394 -0.308 CAW CZ8 24
CZ8 CAX CAX C 0 1 N N N N N N 28.943 69.560 4.782 -3.944 0.136 -0.945 CAX CZ8 25
CZ8 BAY BAY B 0 1 N N N N N N 32.116 61.953 5.908 3.205 4.387 0.895 BAY CZ8 26
CZ8 CAY CAY C 0 1 Y N N N N N 36.205 67.816 -0.328 5.146 -3.775 0.210 CAY CZ8 27
CZ8 CAZ CAZ C 0 1 Y N N N N N 34.800 66.830 1.858 2.984 -2.228 -0.557 CAZ CZ8 28
CZ8 NBC NBC N 0 1 N N N N N N 27.613 71.019 6.286 -5.151 -0.780 0.983 NBC CZ8 29
CZ8 NBD NBD N 0 1 N N N N N N 30.011 69.333 5.752 -2.767 -0.005 -0.302 NBD CZ8 30
CZ8 HN HN H 0 1 N N N N N N 29.988 67.366 4.199 -0.410 -0.176 0.599 HN CZ8 31
CZ8 HA HA H 0 1 N N N N N N 32.669 66.535 5.266 0.669 0.859 -1.910 HA CZ8 32
CZ8 HB HB H 0 1 N N N N N N 32.090 66.729 2.286 2.877 0.472 -0.776 HB CZ8 33
CZ8 HBA HBA H 0 1 N N N N N N 32.860 68.076 3.202 1.998 -0.030 0.688 HBA CZ8 34
CZ8 HAA HAA H 0 1 N N N N N N 24.336 71.424 7.089 -6.191 -3.170 0.334 HAA CZ8 35
CZ8 HAAA HAAA H 0 0 N N N N N N 25.719 72.469 7.559 -5.317 -3.307 1.878 HAAA CZ8 36
CZ8 HAAB HAAB H 0 0 N N N N N N 25.273 72.293 5.828 -7.093 -3.417 1.848 HAAB CZ8 37
CZ8 HOAF HOAF H 0 0 N N N N N N 37.653 68.784 -1.097 6.178 -5.444 0.257 HOAF CZ8 38
CZ8 HOAG HOAG H 0 0 N N N N N N 34.111 62.139 5.468 4.310 3.274 2.164 HOAG CZ8 39
CZ8 HOAH HOAH H 0 0 N N N N N N 30.357 62.021 6.972 4.151 5.524 2.267 HOAH CZ8 40
CZ8 HAI HAI H 0 1 N N N N N N 34.700 66.869 -1.533 3.970 -4.288 1.926 HAI CZ8 41
CZ8 HAJ HAJ H 0 1 N N N N N N 37.553 68.662 1.115 6.078 -3.085 -1.592 HAJ CZ8 42
CZ8 HAK HAK H 0 1 N N N N N N 33.453 65.981 0.412 2.048 -2.913 1.239 HAK CZ8 43
CZ8 HAL HAL H 0 1 N N N N N N 36.301 67.782 3.064 4.153 -1.710 -2.270 HAL CZ8 44
CZ8 HAM HAM H 0 1 N N N N N N 26.328 70.078 7.647 -7.227 -1.054 1.108 HAM CZ8 45
CZ8 HAMA HAMA H 0 0 N N N N N N 25.881 69.902 5.911 -6.353 -1.191 2.652 HAMA CZ8 46
CZ8 HAN HAN H 0 1 N N N N N N 34.632 66.481 3.968 0.887 -1.835 -0.598 HAN CZ8 47
CZ8 HANA HANA H 0 0 N N N N N N 33.893 65.211 2.934 1.765 -1.333 -2.063 HANA CZ8 48
CZ8 HAP HAP H 0 1 N N N N N N 30.455 62.694 4.619 2.683 4.960 -1.153 HAP CZ8 49
CZ8 HAPA HAPA H 0 0 N N N N N N 31.950 62.295 3.711 1.283 4.811 -0.064 HAPA CZ8 50
CZ8 HAQ HAQ H 0 1 N N N N N N 28.769 71.585 7.892 -3.940 -1.250 2.624 HAQ CZ8 51
CZ8 HAQA HAQA H 0 0 N N N N N N 28.017 69.916 7.976 -3.948 0.466 2.159 HAQA CZ8 52
CZ8 HAR HAR H 0 1 N N N N N N 30.634 70.842 7.014 -1.817 -0.471 1.505 HAR CZ8 53
CZ8 HARA HARA H 0 0 N N N N N N 30.111 69.291 7.813 -2.610 -1.839 0.693 HARA CZ8 54
CZ8 HNAS HNAS H 0 0 N N N N N N 32.831 64.317 5.212 2.674 2.586 -1.401 HNAS CZ8 55
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
CZ8 O C DOUB N N 1
CZ8 C CA SING N N 2
CZ8 C NAS SING N N 3
CZ8 CA N SING N N 4
CZ8 N CAV SING N N 5
CZ8 N HN SING N N 6
CZ8 CB CA SING N N 7
CZ8 CA HA SING N N 8
CZ8 CAN CB SING N N 9
CZ8 CB HB SING N N 10
CZ8 CB HBA SING N N 11
CZ8 CAM CAA SING N N 12
CZ8 CAA HAA SING N N 13
CZ8 CAA HAAA SING N N 14
CZ8 CAA HAAB SING N N 15
CZ8 CAV OAC DOUB N N 16
CZ8 OAD CAW DOUB N N 17
CZ8 OAE CAX DOUB N N 18
CZ8 OAF CAY SING N N 19
CZ8 OAF HOAF SING N N 20
CZ8 BAY OAG SING N N 21
CZ8 OAG HOAG SING N N 22
CZ8 BAY OAH SING N N 23
CZ8 OAH HOAH SING N N 24
CZ8 CAI CAY DOUB Y N 25
CZ8 CAI CAK SING Y N 26
CZ8 CAI HAI SING N N 27
CZ8 CAY CAJ SING Y N 28
CZ8 CAJ CAL DOUB Y N 29
CZ8 CAJ HAJ SING N N 30
CZ8 CAK CAZ DOUB Y N 31
CZ8 CAK HAK SING N N 32
CZ8 CAZ CAL SING Y N 33
CZ8 CAL HAL SING N N 34
CZ8 NBC CAM SING N N 35
CZ8 CAM HAM SING N N 36
CZ8 CAM HAMA SING N N 37
CZ8 CAZ CAN SING N N 38
CZ8 CAN HAN SING N N 39
CZ8 CAN HANA SING N N 40
CZ8 CAP NAS SING N N 41
CZ8 CAP BAY SING N N 42
CZ8 CAP HAP SING N N 43
CZ8 CAP HAPA SING N N 44
CZ8 NBC CAQ SING N N 45
CZ8 CAR CAQ SING N N 46
CZ8 CAQ HAQ SING N N 47
CZ8 CAQ HAQA SING N N 48
CZ8 NBD CAR SING N N 49
CZ8 CAR HAR SING N N 50
CZ8 CAR HARA SING N N 51
CZ8 NAS HNAS SING N N 52
CZ8 CAV NBD SING N N 53
CZ8 CAX CAW SING N N 54
CZ8 CAW NBC SING N N 55
CZ8 CAX NBD SING N N 56
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
CZ8 SMILES ACDLabs 12.01 'O=C(NCB(O)O)C(NC(=O)N1C(=O)C(=O)N(CC)CC1)CCc2ccc(O)cc2'
CZ8 SMILES_CANONICAL CACTVS 3.370 'CCN1CCN(C(=O)N[C@H](CCc2ccc(O)cc2)C(=O)NCB(O)O)C(=O)C1=O'
CZ8 SMILES CACTVS 3.370 'CCN1CCN(C(=O)N[CH](CCc2ccc(O)cc2)C(=O)NCB(O)O)C(=O)C1=O'
CZ8 SMILES_CANONICAL 'OpenEye OEToolkits' 1.7.0 'B(CNC(=O)[C@@H](CCc1ccc(cc1)O)NC(=O)N2CCN(C(=O)C2=O)CC)(O)O'
CZ8 SMILES 'OpenEye OEToolkits' 1.7.0 'B(CNC(=O)C(CCc1ccc(cc1)O)NC(=O)N2CCN(C(=O)C2=O)CC)(O)O'
CZ8 InChI InChI 1.03 'InChI=1S/C18H25BN4O7/c1-2-22-9-10-23(17(27)16(22)26)18(28)21-14(15(25)20-11-19(29)30)8-5-12-3-6-13(24)7-4-12/h3-4,6-7,14,24,29-30H,2,5,8-11H2,1H3,(H,20,25)(H,21,28)/t14-/m1/s1'
CZ8 InChIKey InChI 1.03 RSVZQUMTCHOFDU-CQSZACIVSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
CZ8 'SYSTEMATIC NAME' ACDLabs 12.01 '({[(2R)-2-{[(4-ethyl-2,3-dioxopiperazin-1-yl)carbonyl]amino}-4-(4-hydroxyphenyl)butanoyl]amino}methyl)boronic acid'
CZ8 'SYSTEMATIC NAME' 'OpenEye OEToolkits' 1.7.0 '[[(2R)-2-[(4-ethyl-2,3-dioxo-piperazin-1-yl)carbonylamino]-4-(4-hydroxyphenyl)butanoyl]amino]methylboronic acid'
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
CZ8 'Create component' 2010-07-30 RCSB
CZ8 'Modify aromatic_flag' 2011-06-04 RCSB
CZ8 'Modify descriptor' 2011-06-04 RCSB
CZ8 'Modify PCM' 2024-09-27 PDBE
#
_pdbx_chem_comp_pcm.pcm_id 1
_pdbx_chem_comp_pcm.comp_id CZ8
_pdbx_chem_comp_pcm.modified_residue_id SER
_pdbx_chem_comp_pcm.type None
_pdbx_chem_comp_pcm.category 'Covalent chemical modification'
_pdbx_chem_comp_pcm.position 'Amino-acid side chain'
_pdbx_chem_comp_pcm.polypeptide_position 'Any position'
_pdbx_chem_comp_pcm.comp_id_linking_atom BAY
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom OG
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ?
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
CZ8 C C 10.794 -2.160 1
CZ8 N N 9.495 0.090 2
CZ8 O O 12.093 -1.410 3
CZ8 CA C 9.495 -1.410 4
CZ8 CB C 8.196 -2.160 5
CZ8 CAA C 9.495 7.590 6
CZ8 OAC O 6.897 0.090 7
CZ8 OAD O 5.598 5.340 8
CZ8 OAE O 5.598 2.340 9
CZ8 OAF O 3.000 -6.660 10
CZ8 OAG O 13.392 -6.660 11
CZ8 OAH O 10.794 -6.660 12
CZ8 CAI C 4.299 -4.410 13
CZ8 CAJ C 5.598 -6.660 14
CZ8 CAK C 5.598 -3.660 15
CZ8 CAL C 6.897 -5.910 16
CZ8 CAM C 8.196 6.840 17
CZ8 CAN C 8.196 -3.660 18
CZ8 CAP C 12.093 -4.410 19
CZ8 CAQ C 9.495 4.590 20
CZ8 CAR C 9.495 3.090 21
CZ8 NAS N 10.794 -3.660 22
CZ8 CAV C 8.196 0.840 23
CZ8 CAW C 6.897 4.590 24
CZ8 CAX C 6.897 3.090 25
CZ8 BAY B 12.093 -5.910 26
CZ8 CAY C 4.299 -5.910 27
CZ8 CAZ C 6.897 -4.410 28
CZ8 NBC N 8.196 5.340 29
CZ8 NBD N 8.196 2.340 30
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
CZ8 O C DOUBLE NONE 1
CZ8 C CA SINGLE NONE 2
CZ8 C NAS SINGLE NONE 3
CZ8 CA N SINGLE NONE 4
CZ8 N CAV SINGLE NONE 5
CZ8 CA CB SINGLE BEGINWEDGE 6
CZ8 CAN CB SINGLE NONE 7
CZ8 CAM CAA SINGLE NONE 8
CZ8 CAV OAC DOUBLE NONE 9
CZ8 OAD CAW DOUBLE NONE 10
CZ8 OAE CAX DOUBLE NONE 11
CZ8 OAF CAY SINGLE NONE 12
CZ8 BAY OAG SINGLE NONE 13
CZ8 BAY OAH SINGLE NONE 14
CZ8 CAI CAY DOUBLE NONE 15
CZ8 CAI CAK SINGLE NONE 16
CZ8 CAY CAJ SINGLE NONE 17
CZ8 CAJ CAL DOUBLE NONE 18
CZ8 CAK CAZ DOUBLE NONE 19
CZ8 CAZ CAL SINGLE NONE 20
CZ8 NBC CAM SINGLE NONE 21
CZ8 CAZ CAN SINGLE NONE 22
CZ8 CAP NAS SINGLE NONE 23
CZ8 CAP BAY SINGLE NONE 24
CZ8 NBC CAQ SINGLE NONE 25
CZ8 CAR CAQ SINGLE NONE 26
CZ8 NBD CAR SINGLE NONE 27
CZ8 CAV NBD SINGLE NONE 28
CZ8 CAX CAW SINGLE NONE 29
CZ8 CAW NBC SINGLE NONE 30
CZ8 CAX NBD SINGLE NONE 31
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
CZ8 MurckoScaffold S1 scaffold O=C1NCCN(C(=O)NCCCc2ccccc2)C1=O InChI=1S/C14H17N3O3/c18-12-13(19)17(10-9-15-12)14(20)16-8-4-7-11-5-2-1-3-6-11/h1-3,5-6H,4,7-10H2,(H,15,18)(H,16,20) SLVGIWAWHCYTRV-UHFFFAOYSA-N
CZ8 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
CZ8 peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
CZ8 phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
CZ8 piperazine F4 fragment C1CNCCN1 InChI=1S/C4H10N2/c1-2-6-4-3-5-1/h5-6H,1-4H2 GLUUGHFHXGJENI-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
CZ8 N S1 1
CZ8 CA S1 1
CZ8 CB S1 1
CZ8 OAC S1 1
CZ8 OAD S1 1
CZ8 OAE S1 1
CZ8 CAI S1 1
CZ8 CAJ S1 1
CZ8 CAK S1 1
CZ8 CAL S1 1
CZ8 CAN S1 1
CZ8 CAQ S1 1
CZ8 CAR S1 1
CZ8 CAV S1 1
CZ8 CAW S1 1
CZ8 CAX S1 1
CZ8 CAY S1 1
CZ8 CAZ S1 1
CZ8 NBC S1 1
CZ8 NBD S1 1
CZ8 NAS F1 1
CZ8 C F1 1
CZ8 O F1 1
CZ8 CA F1 1
CZ8 NBC F1 2
CZ8 CAW F1 2
CZ8 OAD F1 2
CZ8 CAX F1 2
CZ8 NBD F1 3
CZ8 CAX F1 3
CZ8 OAE F1 3
CZ8 CAW F1 3
CZ8 O F2 1
CZ8 C F2 1
CZ8 CA F2 1
CZ8 N F2 1
CZ8 OAD F2 2
CZ8 CAW F2 2
CZ8 CAX F2 2
CZ8 NBD F2 2
CZ8 OAE F2 3
CZ8 CAX F2 3
CZ8 CAW F2 3
CZ8 NBC F2 3
CZ8 CAI F3 1
CZ8 CAY F3 1
CZ8 CAJ F3 1
CZ8 CAL F3 1
CZ8 CAZ F3 1
CZ8 CAK F3 1
CZ8 NBC F4 1
CZ8 CAQ F4 1
CZ8 CAR F4 1
CZ8 NBD F4 1
CZ8 CAX F4 1
CZ8 CAW F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id CZ8
_pdbe_chem_comp_rdkit_properties.exactmw 420.182
_pdbe_chem_comp_rdkit_properties.amw 420.231
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 11
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 12
_pdbe_chem_comp_rdkit_properties.NumHBD 5
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 30
_pdbe_chem_comp_rdkit_properties.NumAtoms 55
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 12
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 5
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.444
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 1
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 208.846
_pdbe_chem_comp_rdkit_properties.tpsa 159.510
_pdbe_chem_comp_rdkit_properties.CrippenClogP -2.295
_pdbe_chem_comp_rdkit_properties.CrippenMR 105.040
_pdbe_chem_comp_rdkit_properties.chi0v 14.224
_pdbe_chem_comp_rdkit_properties.chi1v 7.267
_pdbe_chem_comp_rdkit_properties.chi2v 2.755
_pdbe_chem_comp_rdkit_properties.chi3v 2.755
_pdbe_chem_comp_rdkit_properties.chi4v 1.531
_pdbe_chem_comp_rdkit_properties.chi0n 39.224
_pdbe_chem_comp_rdkit_properties.chi1n 19.386
_pdbe_chem_comp_rdkit_properties.chi2n 2.755
_pdbe_chem_comp_rdkit_properties.chi3n 2.755
_pdbe_chem_comp_rdkit_properties.chi4n 1.531
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.115
_pdbe_chem_comp_rdkit_properties.kappa1 6.441
_pdbe_chem_comp_rdkit_properties.kappa2 10.601
_pdbe_chem_comp_rdkit_properties.kappa3 6.191
_pdbe_chem_comp_rdkit_properties.Phi 2.276
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
CZ8 UniChem ZINC ZINC000198032148
CZ8 UniChem PubChem 49866864
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
CZ8 C -1.906 1.273 0.706 ETKDGv3 1
CZ8 N 0.125 -0.056 0.754 ETKDGv3 2
CZ8 O -2.579 1.927 1.549 ETKDGv3 3
CZ8 CA -1.299 -0.047 1.106 ETKDGv3 4
CZ8 CB -2.028 -1.222 0.423 ETKDGv3 5
CZ8 CAA 7.076 0.012 -1.103 ETKDGv3 6
CZ8 OAC 0.746 1.424 2.451 ETKDGv3 7
CZ8 OAD 4.222 1.267 -2.295 ETKDGv3 8
CZ8 OAE 1.660 1.078 -1.372 ETKDGv3 9
CZ8 OAF -5.850 -5.947 -1.588 ETKDGv3 10
CZ8 OAG -1.643 5.254 0.488 ETKDGv3 11
CZ8 OAH 0.286 4.160 -0.726 ETKDGv3 12
CZ8 CAI -5.350 -3.620 -1.591 ETKDGv3 13
CZ8 CAJ -4.603 -4.953 0.311 ETKDGv3 14
CZ8 CAK -4.744 -2.436 -0.947 ETKDGv3 15
CZ8 CAL -4.057 -3.881 0.898 ETKDGv3 16
CZ8 CAM 6.476 1.304 -0.559 ETKDGv3 17
CZ8 CAN -3.483 -1.359 0.895 ETKDGv3 18
CZ8 CAP -2.136 3.129 -1.011 ETKDGv3 19
CZ8 CAQ 4.816 0.659 1.259 ETKDGv3 20
CZ8 CAR 3.512 1.285 1.767 ETKDGv3 21
CZ8 NAS -1.720 1.784 -0.623 ETKDGv3 22
CZ8 CAV 1.072 0.812 1.397 ETKDGv3 23
CZ8 CAW 4.004 1.133 -1.060 ETKDGv3 24
CZ8 CAX 2.625 1.048 -0.560 ETKDGv3 25
CZ8 BAY -1.138 4.213 -0.403 ETKDGv3 26
CZ8 CAY -5.284 -4.820 -0.994 ETKDGv3 27
CZ8 CAZ -4.137 -2.550 0.248 ETKDGv3 28
CZ8 NBC 5.093 1.082 -0.120 ETKDGv3 29
CZ8 NBD 2.398 0.972 0.861 ETKDGv3 30
CZ8 HN 0.470 -0.714 0.020 ETKDGv3 31
CZ8 HA -1.389 -0.179 2.208 ETKDGv3 32
CZ8 HB -2.003 -1.093 -0.682 ETKDGv3 33
CZ8 HBA -1.487 -2.163 0.667 ETKDGv3 34
CZ8 HAA 7.071 -0.771 -0.315 ETKDGv3 35
CZ8 HAAA 6.492 -0.347 -1.976 ETKDGv3 36
CZ8 HAAB 8.123 0.193 -1.423 ETKDGv3 37
CZ8 HOAF -6.325 -5.896 -2.482 ETKDGv3 38
CZ8 HOAG -1.883 6.004 -0.114 ETKDGv3 39
CZ8 HOAH 0.683 3.589 -0.021 ETKDGv3 40
CZ8 HAI -5.843 -3.509 -2.549 ETKDGv3 41
CZ8 HAJ -4.542 -5.921 0.791 ETKDGv3 42
CZ8 HAK -4.792 -1.479 -1.453 ETKDGv3 43
CZ8 HAL -3.554 -3.990 1.851 ETKDGv3 44
CZ8 HAM 7.098 1.664 0.289 ETKDGv3 45
CZ8 HAMA 6.508 2.092 -1.342 ETKDGv3 46
CZ8 HAN -3.508 -1.478 2.000 ETKDGv3 47
CZ8 HANA -4.055 -0.437 0.648 ETKDGv3 48
CZ8 HAP -2.111 3.218 -2.118 ETKDGv3 49
CZ8 HAPA -3.175 3.322 -0.670 ETKDGv3 50
CZ8 HAQ 4.723 -0.449 1.284 ETKDGv3 51
CZ8 HAQA 5.647 0.950 1.937 ETKDGv3 52
CZ8 HAR 3.630 2.388 1.837 ETKDGv3 53
CZ8 HARA 3.307 0.889 2.786 ETKDGv3 54
CZ8 HNAS -1.239 1.190 -1.335 ETKDGv3 55
#