data_CXT
#
_chem_comp.id CXT
_chem_comp.name Carboxyatractyloside
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C31 H46 O18 S2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2003-07-21
_chem_comp.pdbx_modified_date 2014-01-14
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 770.816
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code CXT
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 4C9G
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
CXT C1 C1 C 0 1 N N R N N N 20.184 30.401 -15.386 -1.299 -0.127 0.262 C1 CXT 1
CXT O1 O1 O 0 1 N N N N N N 19.793 31.361 -16.363 -1.276 -1.533 0.009 O1 CXT 2
CXT S1 S1 S 0 1 N N N N N N 22.401 33.204 -11.983 -5.638 1.441 0.257 S1 CXT 3
CXT C2 C2 C 0 1 N N R N N N 21.378 30.909 -14.600 -2.540 0.488 -0.389 C2 CXT 4
CXT O2 O2 O 0 1 N N N N N N 20.606 29.217 -16.048 -0.125 0.475 -0.286 O2 CXT 5
CXT S2 S2 S 0 1 N N N N N N 20.782 35.788 -14.589 -5.834 -2.851 -0.551 S2 CXT 6
CXT C3 C3 C 0 1 N N R N N N 21.099 32.277 -13.992 -3.791 -0.205 0.159 C3 CXT 7
CXT O3 O3 O 0 1 N N N N N N 21.646 29.960 -13.574 -2.597 1.906 -0.083 O3 CXT 8
CXT C4 C4 C 0 1 N N R N N N 20.555 33.244 -15.033 -3.684 -1.710 -0.101 C4 CXT 9
CXT O4 O4 O 0 1 N N N N N N 22.304 32.824 -13.464 -4.950 0.312 -0.497 O4 CXT 10
CXT C5 C5 C 0 1 N N R N N N 19.396 32.614 -15.804 -2.398 -2.240 0.540 C5 CXT 11
CXT O5 O5 O 0 1 N N N N N N 20.126 34.417 -14.342 -4.812 -2.376 0.471 O5 CXT 12
CXT C6 C6 C 0 1 N N N N N N 18.949 33.506 -16.953 -2.253 -3.732 0.234 C6 CXT 13
CXT O6 O6 O 0 1 N N N N N N 21.313 34.147 -11.641 -6.860 1.692 -0.423 O6 CXT 14
CXT C7 C7 C 0 1 N N N N N N 23.044 29.575 -13.528 -1.985 2.739 -0.940 C7 CXT 15
CXT O7 O7 O 0 1 N N N N N N 23.711 33.844 -11.729 -5.570 1.102 1.635 O7 CXT 16
CXT C8 C8 C 0 1 N N N N N N 23.591 28.901 -12.297 -2.002 4.225 -0.688 C8 CXT 17
CXT O8 O8 O 0 1 N N N N N N 22.272 31.984 -11.157 -4.783 2.688 0.079 O8 CXT 18
CXT C9 C9 C 0 1 N N N N N N 24.000 27.481 -12.665 -1.240 4.940 -1.805 C9 CXT 19
CXT O9 O9 O 0 1 N N N N N N 22.250 35.651 -14.741 -5.916 -1.834 -1.540 O9 CXT 20
CXT C10 C10 C 0 1 N N N N N N 24.333 26.664 -11.423 -1.978 4.747 -3.131 C10 CXT 21
CXT O10 O10 O 0 1 N N N N N N 20.498 36.671 -13.439 -5.246 -4.074 -1.240 O10 CXT 22
CXT C11 C11 C 0 1 N N N N N N 22.917 26.799 -13.490 -1.149 6.434 -1.485 C11 CXT 23
CXT O11 O11 O 0 1 N N N N N N 20.202 36.375 -15.816 -6.958 -3.309 0.188 O11 CXT 24
CXT O12 O12 O 0 1 N N N N N N 19.981 33.537 -17.945 -1.109 -4.249 0.916 O12 CXT 25
CXT O13 O13 O 0 1 N N N N N N 23.759 29.787 -14.493 -1.421 2.298 -1.913 O13 CXT 26
CXT C21 C21 C 0 1 N N N N N N 20.098 27.101 -16.993 2.219 0.108 -0.694 C21 CXT 27
CXT O21 O21 O 0 1 N N N N N N 20.039 21.158 -18.042 8.238 0.537 -1.126 O21 CXT 28
CXT C22 C22 C 0 1 N N S N N N 19.643 28.172 -16.012 1.097 0.050 0.340 C22 CXT 29
CXT O22 O22 O 0 1 N N N N N N 17.046 28.066 -14.149 1.809 -0.460 4.113 O22 CXT 30
CXT C23 C23 C 0 1 N N N N N N 19.581 27.592 -14.602 1.404 0.984 1.503 C23 CXT 31
CXT O23 O23 O 0 1 N N N N N N 16.280 26.119 -14.769 3.317 -1.485 2.864 O23 CXT 32
CXT C24 C24 C 0 1 N N N N N N 18.663 26.380 -14.515 2.758 0.684 2.145 C24 CXT 33
CXT O24 O24 O 0 1 N N N N N N 17.954 25.666 -12.376 2.263 2.237 4.025 O24 CXT 34
CXT C25 C25 C 0 1 N N S N N N 19.053 25.354 -15.606 3.858 0.546 1.117 C25 CXT 35
CXT O25 O25 O 0 1 N N N N N N 20.034 25.243 -12.951 4.083 2.540 2.809 O25 CXT 36
CXT C26 C26 C 0 1 N N N N N N 18.256 24.054 -15.591 5.200 0.166 1.736 C26 CXT 37
CXT C27 C27 C 0 1 N N N N N N 19.004 22.996 -16.388 6.304 0.421 0.703 C27 CXT 38
CXT C28 C28 C 0 1 N N R N N N 19.241 23.429 -17.832 6.052 -0.373 -0.560 C28 CXT 39
CXT C29 C29 C 0 1 N N S N N N 19.796 24.866 -17.945 4.642 -0.243 -1.099 C29 CXT 40
CXT C30 C30 C 0 1 N N S N N N 19.141 25.921 -17.026 3.536 -0.373 -0.059 C30 CXT 41
CXT C31 C31 C 0 1 N N N N N N 19.895 25.342 -19.404 4.411 -1.087 -2.338 C31 CXT 42
CXT C32 C32 C 0 1 N N N N N N 18.856 24.777 -20.380 5.118 -2.431 -2.345 C32 CXT 43
CXT C33 C33 C 0 1 N N R N N N 18.546 23.318 -20.098 6.559 -2.312 -1.839 C33 CXT 44
CXT C34 C34 C 0 1 N N N N N N 17.990 23.270 -18.690 6.467 -1.844 -0.361 C34 CXT 45
CXT C35 C35 C 0 1 N N S N N N 20.244 22.494 -18.497 7.010 0.084 -1.692 C35 CXT 46
CXT C36 C36 C 0 1 N N N N N N 19.832 22.591 -19.928 7.235 -1.148 -2.548 C36 CXT 47
CXT C37 C37 C 0 1 N N N N N N 17.234 26.877 -14.487 2.649 -0.499 3.066 C37 CXT 48
CXT C38 C38 C 0 1 N N N N N N 18.902 25.717 -13.189 3.085 1.894 3.021 C38 CXT 49
CXT C39 C39 C 0 1 N N N N N N 17.809 26.423 -17.578 3.364 -1.830 0.355 C39 CXT 50
CXT C40 C40 C 0 1 N N N N N N 20.531 22.093 -20.930 7.889 -1.202 -3.683 C40 CXT 51
CXT H1 H1 H 0 1 N N N N N N 19.355 30.188 -14.695 -1.329 0.048 1.338 H1 CXT 52
CXT H2 H2 H 0 1 N N N N N N 22.241 30.991 -15.277 -2.491 0.349 -1.469 H2 CXT 53
CXT H3 H3 H 0 1 N N N N N N 20.353 32.163 -13.191 -3.868 -0.023 1.231 H3 CXT 54
CXT H4 H4 H 0 1 N N N N N N 21.358 33.493 -15.742 -3.659 -1.894 -1.175 H4 CXT 55
CXT H5 H5 H 0 1 N N N N N N 18.550 32.470 -15.116 -2.443 -2.093 1.619 H5 CXT 56
CXT H6 H6 H 0 1 N N N N N N 18.025 33.104 -17.394 -3.145 -4.261 0.569 H6 CXT 57
CXT H6A H6A H 0 1 N N N N N N 18.765 34.524 -16.580 -2.130 -3.872 -0.840 H6A CXT 58
CXT H8 H8 H 0 1 N N N N N N 24.467 29.456 -11.928 -3.033 4.578 -0.667 H8 CXT 59
CXT H8A H8A H 0 1 N N N N N N 22.818 28.874 -11.515 -1.526 4.436 0.270 H8A CXT 60
CXT HO8 HO8 H 0 1 N N N N N N 21.519 32.067 -10.584 -5.133 3.472 0.523 HO8 CXT 61
CXT H9 H9 H 0 1 N N N N N N 24.908 27.541 -13.283 -0.235 4.524 -1.884 H9 CXT 62
CXT H10 H10 H 0 1 N N N N N N 24.624 25.646 -11.720 -2.042 3.682 -3.359 H10 CXT 63
CXT H10A H10A H 0 0 N N N N N N 25.165 27.140 -10.883 -2.982 5.163 -3.052 H10A CXT 64
CXT H10B H10B H 0 0 N N N N N N 23.450 26.616 -10.768 -1.434 5.256 -3.927 H10B CXT 65
CXT HO10 HO10 H 0 0 N N N N N N 21.316 36.957 -13.049 -5.821 -4.459 -1.916 HO10 CXT 66
CXT H11 H11 H 0 1 N N N N N N 23.236 25.777 -13.742 -0.624 6.572 -0.540 H11 CXT 67
CXT H11A H11A H 0 0 N N N N N N 21.984 26.759 -12.908 -0.606 6.944 -2.281 H11A CXT 68
CXT H11B H11B H 0 0 N N N N N N 22.748 27.369 -14.415 -2.154 6.850 -1.406 H11B CXT 69
CXT HO12 HO12 H 0 0 N N N N N N 19.710 34.092 -18.667 -0.955 -5.193 0.767 HO12 CXT 70
CXT H21 H21 H 0 1 N N N N N N 21.094 26.743 -16.693 1.970 -0.533 -1.537 H21 CXT 71
CXT H21A H21A H 0 0 N N N N N N 20.155 27.541 -17.999 2.348 1.134 -1.038 H21A CXT 72
CXT HO21 HO21 H 0 0 N N N N N N 20.667 20.581 -18.460 8.885 0.838 -1.779 HO21 CXT 73
CXT H22 H22 H 0 1 N N N N N N 18.648 28.541 -16.303 0.952 -0.967 0.699 H22 CXT 74
CXT HO22 HO22 H 0 0 N N N N N N 16.115 28.253 -14.152 1.774 -1.245 4.676 HO22 CXT 75
CXT H23 H23 H 0 1 N N N N N N 20.594 27.291 -14.299 1.400 2.019 1.148 H23 CXT 76
CXT H23A H23A H 0 0 N N N N N N 19.209 28.368 -13.917 0.622 0.882 2.263 H23A CXT 77
CXT HO24 HO24 H 0 0 N N N N N N 18.238 25.223 -11.585 2.511 3.009 4.551 HO24 CXT 78
CXT H25 H25 H 0 1 N N N N N N 20.083 25.058 -15.356 4.006 1.563 0.674 H25 CXT 79
CXT H26 H26 H 0 1 N N N N N N 18.131 23.712 -14.553 5.403 0.774 2.617 H26 CXT 80
CXT H26A H26A H 0 0 N N N N N N 17.268 24.224 -16.043 5.213 -0.884 2.021 H26A CXT 81
CXT H27 H27 H 0 1 N N N N N N 19.977 22.812 -15.908 6.331 1.486 0.459 H27 CXT 82
CXT H27A H27A H 0 0 N N N N N N 18.413 22.068 -16.388 7.267 0.131 1.128 H27A CXT 83
CXT H29 H29 H 0 1 N N N N N N 20.837 24.795 -17.598 4.562 0.817 -1.459 H29 CXT 84
CXT H31 H31 H 0 1 N N N N N N 19.794 26.437 -19.406 3.338 -1.253 -2.469 H31 CXT 85
CXT H31A H31A H 0 0 N N N N N N 20.891 25.065 -19.779 4.748 -0.513 -3.213 H31A CXT 86
CXT H32 H32 H 0 1 N N N N N N 17.928 25.361 -20.289 4.572 -3.145 -1.727 H32 CXT 87
CXT H32A H32A H 0 0 N N N N N N 19.246 24.866 -21.405 5.134 -2.821 -3.370 H32A CXT 88
CXT H33 H33 H 0 1 N N N N N N 17.877 22.865 -20.845 7.117 -3.243 -1.948 H33 CXT 89
CXT H34 H34 H 0 1 N N N N N N 17.492 22.309 -18.492 7.460 -1.899 0.113 H34 CXT 90
CXT H34A H34A H 0 0 N N N N N N 17.281 24.093 -18.515 5.768 -2.432 0.213 H34A CXT 91
CXT H35 H35 H 0 1 N N N N N N 21.276 22.843 -18.345 6.535 0.875 -2.267 H35 CXT 92
CXT H39 H39 H 0 1 N N N N N N 17.090 25.591 -17.616 4.247 -2.158 0.905 H39 CXT 93
CXT H39A H39A H 0 0 N N N N N N 17.417 27.217 -16.925 2.484 -1.926 0.991 H39A CXT 94
CXT H39B H39B H 0 0 N N N N N N 17.960 26.823 -18.591 3.239 -2.448 -0.534 H39B CXT 95
CXT H40 H40 H 0 1 N N N N N N 21.461 21.579 -20.737 7.987 -2.141 -4.206 H40 CXT 96
CXT H40A H40A H 0 0 N N N N N N 20.173 22.199 -21.943 8.330 -0.306 -4.094 H40A CXT 97
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
CXT O1 C1 SING N N 1
CXT O2 C1 SING N N 2
CXT C1 C2 SING N N 3
CXT C1 H1 SING N N 4
CXT O1 C5 SING N N 5
CXT O4 S1 SING N N 6
CXT S1 O7 DOUB N N 7
CXT S1 O6 DOUB N N 8
CXT S1 O8 SING N N 9
CXT C2 C3 SING N N 10
CXT C2 O3 SING N N 11
CXT C2 H2 SING N N 12
CXT O2 C22 SING N N 13
CXT O11 S2 DOUB N N 14
CXT O9 S2 DOUB N N 15
CXT S2 O5 SING N N 16
CXT S2 O10 SING N N 17
CXT C4 C3 SING N N 18
CXT C3 O4 SING N N 19
CXT C3 H3 SING N N 20
CXT O3 C7 SING N N 21
CXT C5 C4 SING N N 22
CXT C4 O5 SING N N 23
CXT C4 H4 SING N N 24
CXT C6 C5 SING N N 25
CXT C5 H5 SING N N 26
CXT O12 C6 SING N N 27
CXT C6 H6 SING N N 28
CXT C6 H6A SING N N 29
CXT O13 C7 DOUB N N 30
CXT C7 C8 SING N N 31
CXT C9 C8 SING N N 32
CXT C8 H8 SING N N 33
CXT C8 H8A SING N N 34
CXT O8 HO8 SING N N 35
CXT C11 C9 SING N N 36
CXT C9 C10 SING N N 37
CXT C9 H9 SING N N 38
CXT C10 H10 SING N N 39
CXT C10 H10A SING N N 40
CXT C10 H10B SING N N 41
CXT O10 HO10 SING N N 42
CXT C11 H11 SING N N 43
CXT C11 H11A SING N N 44
CXT C11 H11B SING N N 45
CXT O12 HO12 SING N N 46
CXT C30 C21 SING N N 47
CXT C21 C22 SING N N 48
CXT C21 H21 SING N N 49
CXT C21 H21A SING N N 50
CXT C35 O21 SING N N 51
CXT O21 HO21 SING N N 52
CXT C22 C23 SING N N 53
CXT C22 H22 SING N N 54
CXT C37 O22 SING N N 55
CXT O22 HO22 SING N N 56
CXT C23 C24 SING N N 57
CXT C23 H23 SING N N 58
CXT C23 H23A SING N N 59
CXT O23 C37 DOUB N N 60
CXT C25 C24 SING N N 61
CXT C24 C37 SING N N 62
CXT C24 C38 SING N N 63
CXT C38 O24 SING N N 64
CXT O24 HO24 SING N N 65
CXT C30 C25 SING N N 66
CXT C25 C26 SING N N 67
CXT C25 H25 SING N N 68
CXT C38 O25 DOUB N N 69
CXT C27 C26 SING N N 70
CXT C26 H26 SING N N 71
CXT C26 H26A SING N N 72
CXT C28 C27 SING N N 73
CXT C27 H27 SING N N 74
CXT C27 H27A SING N N 75
CXT C34 C28 SING N N 76
CXT C35 C28 SING N N 77
CXT C29 C28 SING N N 78
CXT C31 C29 SING N N 79
CXT C29 C30 SING N N 80
CXT C29 H29 SING N N 81
CXT C39 C30 SING N N 82
CXT C32 C31 SING N N 83
CXT C31 H31 SING N N 84
CXT C31 H31A SING N N 85
CXT C32 C33 SING N N 86
CXT C32 H32 SING N N 87
CXT C32 H32A SING N N 88
CXT C33 C36 SING N N 89
CXT C33 C34 SING N N 90
CXT C33 H33 SING N N 91
CXT C34 H34 SING N N 92
CXT C34 H34A SING N N 93
CXT C36 C35 SING N N 94
CXT C35 H35 SING N N 95
CXT C40 C36 DOUB N N 96
CXT C39 H39 SING N N 97
CXT C39 H39A SING N N 98
CXT C39 H39B SING N N 99
CXT C40 H40 SING N N 100
CXT C40 H40A SING N N 101
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
CXT SMILES ACDLabs 12.01 O=C(O)C4(C(=O)O)C5CCC12CC(/C(=C)C1O)CCC2C5(CC(OC3OC(C(OS(=O)(=O)O)C(OS(=O)(=O)O)C3OC(=O)CC(C)C)CO)C4)C
CXT InChI InChI 1.03 InChI=1S/C31H46O18S2/c1-14(2)9-21(33)47-24-23(49-51(42,43)44)22(48-50(39,40)41)18(13-32)46-26(24)45-17-11-29(4)19-6-5-16-10-30(19,25(34)15(16)3)8-7-20(29)31(12-17,27(35)36)28(37)38/h14,16-20,22-26,32,34H,3,5-13H2,1-2,4H3,(H,35,36)(H,37,38)(H,39,40,41)(H,42,43,44)/t16-,17+,18-,19+,20+,22-,23+,24-,25+,26-,29+,30-/m1/s1
CXT InChIKey InChI 1.03 AQFATIOBERWBDY-LNQSNDDKSA-N
CXT SMILES_CANONICAL CACTVS 3.385 CC(C)CC(=O)O[C@H]1[C@H](O[C@H]2C[C@@]3(C)[C@@H]4CC[C@@H]5C[C@@]4(CC[C@@H]3C(C2)(C(O)=O)C(O)=O)[C@@H](O)C5=C)O[C@H](CO)[C@@H](O[S](O)(=O)=O)[C@@H]1O[S](O)(=O)=O
CXT SMILES CACTVS 3.385 CC(C)CC(=O)O[CH]1[CH](O[CH]2C[C]3(C)[CH]4CC[CH]5C[C]4(CC[CH]3C(C2)(C(O)=O)C(O)=O)[CH](O)C5=C)O[CH](CO)[CH](O[S](O)(=O)=O)[CH]1O[S](O)(=O)=O
CXT SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 CC(C)CC(=O)O[C@@H]1[C@H]([C@@H]([C@H](O[C@H]1O[C@H]2C[C@]3([C@@H]4CC[C@@H]5C[C@@]4(CC[C@@H]3C(C2)(C(=O)O)C(=O)O)[C@H](C5=C)O)C)CO)OS(=O)(=O)O)OS(=O)(=O)O
CXT SMILES "OpenEye OEToolkits" 1.7.6 CC(C)CC(=O)OC1C(C(C(OC1OC2CC3(C4CCC5CC4(CCC3C(C2)(C(=O)O)C(=O)O)C(C5=C)O)C)CO)OS(=O)(=O)O)OS(=O)(=O)O
#
_pdbx_chem_comp_identifier.comp_id CXT
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program ACDLabs
_pdbx_chem_comp_identifier.program_version 12.01
_pdbx_chem_comp_identifier.identifier
"(2alpha,8alpha,10alpha,13alpha,15beta)-15-hydroxy-2-{[2-O-(3-methylbutanoyl)-3,4-di-O-sulfo-beta-D-glucopyranosyl]oxy}kaur-16-ene-18,19-dioic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
CXT 'Create component' 2003-07-21 EBI
CXT 'Modify descriptor' 2011-06-04 RCSB
CXT 'Modify model coordinates code' 2014-01-14 EBI
CXT 'Other modification' 2014-01-14 EBI
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
CXT C1 C 10.301 -1.623 1
CXT O1 O 9.002 -0.873 2
CXT S1 S 7.702 -6.123 3
CXT C2 C 10.301 -3.123 4
CXT O2 O 11.600 -0.873 5
CXT S2 S 5.104 -3.123 6
CXT C3 C 9.002 -3.873 7
CXT O3 O 11.600 -3.873 8
CXT C4 C 7.702 -3.123 9
CXT O4 O 9.002 -5.373 10
CXT C5 C 7.702 -1.623 11
CXT O5 O 6.404 -3.873 12
CXT C6 C 6.404 -0.873 13
CXT O6 O 8.453 -7.422 14
CXT C7 C 11.600 -5.373 15
CXT O7 O 6.404 -6.873 16
CXT C8 C 12.899 -6.123 17
CXT O8 O 6.952 -4.824 18
CXT C9 C 12.899 -7.623 19
CXT O9 O 4.354 -4.422 20
CXT C10 C 11.600 -8.373 21
CXT O10 O 5.854 -1.824 22
CXT C11 C 14.198 -8.373 23
CXT O11 O 3.805 -2.373 24
CXT O12 O 6.404 0.627 25
CXT O13 O 10.301 -6.123 26
CXT C21 C 13.006 1.447 27
CXT O21 O 15.221 7.748 28
CXT C22 C 11.600 0.627 29
CXT O22 O 7.311 3.632 30
CXT C23 C 10.193 1.447 31
CXT O23 O 7.942 1.810 32
CXT C24 C 10.212 3.074 33
CXT O24 O 10.252 5.672 34
CXT C25 C 11.637 3.860 35
CXT O25 O 8.348 5.366 36
CXT C26 C 11.655 5.423 37
CXT C27 C 13.023 6.178 38
CXT C28 C 14.354 5.360 39
CXT C29 C 14.337 3.860 40
CXT C30 C 12.987 3.074 41
CXT C31 C 15.499 2.912 42
CXT C32 C 16.965 3.228 43
CXT C33 C 17.632 4.572 44
CXT C34 C 15.865 4.433 45
CXT C35 C 15.538 6.282 46
CXT C36 C 16.997 5.931 47
CXT C37 C 8.712 3.097 48
CXT C38 C 9.482 4.384 49
CXT C39 C 13.947 1.921 50
CXT C40 C 17.945 7.093 51
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
CXT O1 C1 SINGLE NONE 1
CXT C1 O2 SINGLE BEGINWEDGE 2
CXT C1 C2 SINGLE NONE 3
CXT O1 C5 SINGLE NONE 4
CXT O4 S1 SINGLE NONE 5
CXT S1 O7 DOUBLE NONE 6
CXT S1 O6 DOUBLE NONE 7
CXT S1 O8 SINGLE NONE 8
CXT C2 C3 SINGLE NONE 9
CXT C2 O3 SINGLE BEGINDASH 10
CXT C22 O2 SINGLE BEGINDASH 11
CXT O11 S2 DOUBLE NONE 12
CXT O9 S2 DOUBLE NONE 13
CXT S2 O5 SINGLE NONE 14
CXT S2 O10 SINGLE NONE 15
CXT C4 C3 SINGLE NONE 16
CXT C3 O4 SINGLE BEGINWEDGE 17
CXT O3 C7 SINGLE NONE 18
CXT C5 C4 SINGLE NONE 19
CXT C4 O5 SINGLE BEGINDASH 20
CXT C5 C6 SINGLE BEGINWEDGE 21
CXT O12 C6 SINGLE NONE 22
CXT O13 C7 DOUBLE NONE 23
CXT C7 C8 SINGLE NONE 24
CXT C9 C8 SINGLE NONE 25
CXT C11 C9 SINGLE NONE 26
CXT C9 C10 SINGLE NONE 27
CXT C30 C21 SINGLE NONE 28
CXT C21 C22 SINGLE NONE 29
CXT C35 O21 SINGLE BEGINWEDGE 30
CXT C22 C23 SINGLE NONE 31
CXT C37 O22 SINGLE NONE 32
CXT C23 C24 SINGLE NONE 33
CXT O23 C37 DOUBLE NONE 34
CXT C25 C24 SINGLE NONE 35
CXT C24 C37 SINGLE NONE 36
CXT C24 C38 SINGLE NONE 37
CXT C38 O24 SINGLE NONE 38
CXT C30 C25 SINGLE NONE 39
CXT C25 C26 SINGLE NONE 40
CXT C38 O25 DOUBLE NONE 41
CXT C27 C26 SINGLE NONE 42
CXT C28 C27 SINGLE BEGINWEDGE 43
CXT C34 C28 SINGLE NONE 44
CXT C35 C28 SINGLE NONE 45
CXT C29 C28 SINGLE NONE 46
CXT C31 C29 SINGLE NONE 47
CXT C29 C30 SINGLE NONE 48
CXT C30 C39 SINGLE BEGINWEDGE 49
CXT C32 C31 SINGLE NONE 50
CXT C32 C33 SINGLE NONE 51
CXT C33 C36 SINGLE NONE 52
CXT C33 C34 SINGLE NONE 53
CXT C36 C35 SINGLE NONE 54
CXT C40 C36 DOUBLE NONE 55
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
CXT MurckoScaffold S1 scaffold 'C=C1C[C@@]23CC[C@@H]4CC[C@@H](O[C@H]5CCCCO5)CC4[C@@H]2CC[C@@H]1C3' InChI=1S/C22H34O2/c1-15-13-22-10-9-16-5-7-18(24-21-4-2-3-11-23-21)12-19(16)20(22)8-6-17(15)14-22/h16-21H,1-14H2/t16-,17+,18+,19+,20-,21-,22+/m0/s1 KYMMCMKQISEDBL-WPAMHUCSSA-N
CXT cyclohexane F1 fragment C1CCCCC1 InChI=1S/C6H12/c1-2-4-6-5-3-1/h1-6H2 XDTMQSROBMDMFD-UHFFFAOYSA-N
CXT cyclopentane F2 fragment C1CCCC1 InChI=1S/C5H10/c1-2-4-5-3-1/h1-5H2 RGSFGYAAUTVSQA-UHFFFAOYSA-N
CXT pyranose F3 fragment OC1CCCCO1 InChI=1S/C5H10O2/c6-5-3-1-2-4-7-5/h5-6H,1-4H2 CELWCAITJAEQNL-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
CXT C1 S1 1
CXT O1 S1 1
CXT C2 S1 1
CXT O2 S1 1
CXT C3 S1 1
CXT C4 S1 1
CXT C5 S1 1
CXT C21 S1 1
CXT C22 S1 1
CXT C23 S1 1
CXT C24 S1 1
CXT C25 S1 1
CXT C26 S1 1
CXT C27 S1 1
CXT C28 S1 1
CXT C29 S1 1
CXT C30 S1 1
CXT C31 S1 1
CXT C32 S1 1
CXT C33 S1 1
CXT C34 S1 1
CXT C35 S1 1
CXT C36 S1 1
CXT C40 S1 1
CXT C21 F1 1
CXT C30 F1 1
CXT C25 F1 1
CXT C24 F1 1
CXT C23 F1 1
CXT C22 F1 1
CXT C25 F1 2
CXT C30 F1 2
CXT C29 F1 2
CXT C28 F1 2
CXT C27 F1 2
CXT C26 F1 2
CXT C28 F1 3
CXT C34 F1 3
CXT C33 F1 3
CXT C32 F1 3
CXT C31 F1 3
CXT C29 F1 3
CXT C28 F2 1
CXT C34 F2 1
CXT C33 F2 1
CXT C36 F2 1
CXT C35 F2 1
CXT C4 F3 1
CXT C5 F3 1
CXT O1 F3 1
CXT C1 F3 1
CXT C2 F3 1
CXT C3 F3 1
CXT O2 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id CXT
_pdbe_chem_comp_rdkit_properties.exactmw 770.213
_pdbe_chem_comp_rdkit_properties.amw 770.825
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 18
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 6
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 19
_pdbe_chem_comp_rdkit_properties.NumHBD 6
_pdbe_chem_comp_rdkit_properties.NumHBA 18
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 51
_pdbe_chem_comp_rdkit_properties.NumAtoms 97
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 20
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.839
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 5
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 5
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 1
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 2
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 12
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 360.022
_pdbe_chem_comp_rdkit_properties.tpsa 287.020
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.122
_pdbe_chem_comp_rdkit_properties.CrippenMR 168.978
_pdbe_chem_comp_rdkit_properties.chi0v 25.298
_pdbe_chem_comp_rdkit_properties.chi1v 15.062
_pdbe_chem_comp_rdkit_properties.chi2v 7.353
_pdbe_chem_comp_rdkit_properties.chi3v 7.353
_pdbe_chem_comp_rdkit_properties.chi4v 5.458
_pdbe_chem_comp_rdkit_properties.chi0n 69.665
_pdbe_chem_comp_rdkit_properties.chi1n 34.845
_pdbe_chem_comp_rdkit_properties.chi2n 6.611
_pdbe_chem_comp_rdkit_properties.chi3n 6.611
_pdbe_chem_comp_rdkit_properties.chi4n 4.747
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.270
_pdbe_chem_comp_rdkit_properties.kappa1 11.389
_pdbe_chem_comp_rdkit_properties.kappa2 13.856
_pdbe_chem_comp_rdkit_properties.kappa3 7.201
_pdbe_chem_comp_rdkit_properties.Phi 3.094
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
CXT UniChem 'Guide to Pharmacology' 4572
CXT UniChem ChEBI 189512
CXT UniChem ZINC ZINC000098208772
CXT UniChem SureChEMBL SCHEMBL1612956
CXT UniChem Nikkaji J674.844I
CXT UniChem MedChemExpress HY-N1502
CXT UniChem 'Probes And Drugs' PD050352
CXT UniChem PubChem 20055804
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
CXT C1 2.003 -0.310 -0.671 ETKDGv3 1
CXT O1 2.646 -0.434 -1.931 ETKDGv3 2
CXT S1 3.025 -3.473 2.240 ETKDGv3 3
CXT C2 2.994 -0.486 0.505 ETKDGv3 4
CXT O2 0.919 -1.222 -0.579 ETKDGv3 5
CXT S2 6.910 -1.945 -0.954 ETKDGv3 6
CXT C3 3.732 -1.828 0.403 ETKDGv3 7
CXT O3 3.951 0.575 0.505 ETKDGv3 8
CXT C4 4.347 -1.995 -1.000 ETKDGv3 9
CXT O4 2.837 -2.895 0.655 ETKDGv3 10
CXT C5 3.329 -1.667 -2.124 ETKDGv3 11
CXT O5 5.445 -1.109 -1.135 ETKDGv3 12
CXT C6 2.371 -2.828 -2.478 ETKDGv3 13
CXT O6 4.366 -4.140 2.382 ETKDGv3 14
CXT C7 3.664 1.881 0.915 ETKDGv3 15
CXT O7 2.908 -2.346 3.229 ETKDGv3 16
CXT C8 4.710 2.941 0.765 ETKDGv3 17
CXT O8 1.814 -4.598 2.545 ETKDGv3 18
CXT C9 4.599 3.663 -0.594 ETKDGv3 19
CXT O9 7.098 -2.905 -2.097 ETKDGv3 20
CXT C10 4.921 2.721 -1.764 ETKDGv3 21
CXT O10 6.947 -2.775 0.510 ETKDGv3 22
CXT C11 5.539 4.875 -0.624 ETKDGv3 23
CXT O11 8.036 -0.951 -0.970 ETKDGv3 24
CXT O12 3.075 -3.885 -3.074 ETKDGv3 25
CXT O13 2.528 2.179 1.376 ETKDGv3 26
CXT C21 -1.232 -0.132 -0.586 ETKDGv3 27
CXT O21 -7.276 -0.062 0.102 ETKDGv3 28
CXT C22 -0.114 -0.749 0.272 ETKDGv3 29
CXT O22 0.074 -0.714 3.490 ETKDGv3 30
CXT C23 -0.659 -1.943 1.068 ETKDGv3 31
CXT O23 -2.075 -0.094 3.947 ETKDGv3 32
CXT C24 -1.819 -1.551 2.022 ETKDGv3 33
CXT O24 -1.923 -3.318 3.835 ETKDGv3 34
CXT C25 -2.929 -0.811 1.169 ETKDGv3 35
CXT O25 -3.163 -3.563 1.927 ETKDGv3 36
CXT C26 -4.282 -0.591 1.911 ETKDGv3 37
CXT C27 -4.981 0.722 1.576 ETKDGv3 38
CXT C28 -5.026 1.013 0.050 ETKDGv3 39
CXT C29 -3.625 0.776 -0.695 ETKDGv3 40
CXT C30 -2.433 0.394 0.268 ETKDGv3 41
CXT C31 -3.270 1.907 -1.721 ETKDGv3 42
CXT C32 -4.493 2.448 -2.507 ETKDGv3 43
CXT C33 -5.807 2.437 -1.688 ETKDGv3 44
CXT C34 -5.487 2.464 -0.196 ETKDGv3 45
CXT C35 -6.138 0.196 -0.690 ETKDGv3 46
CXT C36 -6.479 1.104 -1.833 ETKDGv3 47
CXT C37 -1.287 -0.721 3.189 ETKDGv3 48
CXT C38 -2.366 -2.852 2.598 ETKDGv3 49
CXT C39 -1.949 1.658 1.051 ETKDGv3 50
CXT C40 -7.265 0.760 -2.859 ETKDGv3 51
CXT H1 1.625 0.738 -0.644 ETKDGv3 52
CXT H2 2.447 -0.465 1.471 ETKDGv3 53
CXT H3 4.579 -1.809 1.128 ETKDGv3 54
CXT H4 4.644 -3.063 -1.124 ETKDGv3 55
CXT H5 3.939 -1.518 -3.042 ETKDGv3 56
CXT H6 1.579 -2.461 -3.170 ETKDGv3 57
CXT H6A 1.862 -3.226 -1.581 ETKDGv3 58
CXT H8 5.716 2.482 0.874 ETKDGv3 59
CXT H8A 4.587 3.675 1.592 ETKDGv3 60
CXT HO8 1.938 -4.857 3.493 ETKDGv3 61
CXT H9 3.559 4.037 -0.720 ETKDGv3 62
CXT H10 4.882 3.276 -2.726 ETKDGv3 63
CXT H10A 5.933 2.278 -1.646 ETKDGv3 64
CXT H10B 4.174 1.902 -1.821 ETKDGv3 65
CXT HO10 6.559 -3.666 0.317 ETKDGv3 66
CXT H11 6.596 4.554 -0.501 ETKDGv3 67
CXT H11A 5.280 5.582 0.193 ETKDGv3 68
CXT H11B 5.437 5.416 -1.589 ETKDGv3 69
CXT HO12 3.240 -3.624 -4.018 ETKDGv3 70
CXT H21 -1.582 -0.902 -1.310 ETKDGv3 71
CXT H21A -0.793 0.688 -1.192 ETKDGv3 72
CXT HO21 -7.726 0.799 0.305 ETKDGv3 73
CXT H22 0.249 0.012 0.999 ETKDGv3 74
CXT HO22 0.432 -0.185 4.276 ETKDGv3 75
CXT H23 0.172 -2.412 1.639 ETKDGv3 76
CXT H23A -1.009 -2.714 0.344 ETKDGv3 77
CXT HO24 -2.258 -4.197 4.210 ETKDGv3 78
CXT H25 -3.206 -1.575 0.403 ETKDGv3 79
CXT H26 -4.172 -0.654 3.010 ETKDGv3 80
CXT H26A -4.979 -1.420 1.649 ETKDGv3 81
CXT H27 -4.492 1.542 2.132 ETKDGv3 82
CXT H27A -6.003 0.698 2.009 ETKDGv3 83
CXT H29 -3.746 -0.115 -1.349 ETKDGv3 84
CXT H31 -2.523 1.538 -2.456 ETKDGv3 85
CXT H31A -2.802 2.766 -1.198 ETKDGv3 86
CXT H32 -4.276 3.493 -2.817 ETKDGv3 87
CXT H32A -4.618 1.863 -3.446 ETKDGv3 88
CXT H33 -6.483 3.273 -1.973 ETKDGv3 89
CXT H34 -4.720 3.223 0.071 ETKDGv3 90
CXT H34A -6.404 2.705 0.387 ETKDGv3 91
CXT H35 -5.765 -0.781 -1.064 ETKDGv3 92
CXT H39 -2.758 2.373 1.275 ETKDGv3 93
CXT H39A -1.428 1.428 1.989 ETKDGv3 94
CXT H39B -1.223 2.242 0.446 ETKDGv3 95
CXT H40 -7.463 1.465 -3.661 ETKDGv3 96
CXT H40A -7.712 -0.228 -2.903 ETKDGv3 97
#