data_CMP
#
_chem_comp.id CMP
_chem_comp.name "ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C10 H12 N5 O6 P"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms "CYCLIC AMP; CAMP"
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2020-05-28
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 329.206
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code CMP
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1RUN
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
CMP P P P 0 1 N N R N N N 23.331 65.840 7.282 0.035 0.457 -4.129 P CMP 1
CMP O1P O1P O 0 1 N N N N N N 24.410 65.875 8.285 1.127 1.448 -4.010 O1P CMP 2
CMP O2P O2P O 0 1 N N N N N N 22.096 66.642 7.482 -0.773 0.723 -5.496 O2P CMP 3
CMP "O5'" O5* O 0 1 N N N N N N 24.063 66.219 5.913 0.664 -1.020 -4.167 "O5'" CMP 4
CMP "C5'" C5* C 0 1 N N N N N N 23.590 65.766 4.634 1.291 -1.282 -2.903 "C5'" CMP 5
CMP "C4'" C4* C 0 1 N N R N N N 22.867 64.454 4.776 0.229 -1.157 -1.826 "C4'" CMP 6
CMP "O4'" O4* O 0 1 N N N N N N 23.145 63.564 3.660 0.656 -1.453 -0.497 "O4'" CMP 7
CMP "C3'" C3* C 0 1 N N S N N N 23.378 63.641 5.941 -0.193 0.332 -1.731 "C3'" CMP 8
CMP "O3'" O3* O 0 1 N N N N N N 22.893 64.317 7.078 -0.970 0.624 -2.876 "O3'" CMP 9
CMP "C2'" C2* C 0 1 N N R N N N 22.798 62.275 5.618 -0.954 0.340 -0.394 "C2'" CMP 10
CMP "O2'" O2* O 0 1 N N N N N N 21.396 62.250 5.837 -2.353 0.144 -0.610 "O2'" CMP 11
CMP "C1'" C1* C 0 1 N N R N N N 23.073 62.218 4.113 -0.331 -0.851 0.372 "C1'" CMP 12
CMP N9 N9 N 0 1 Y N N N N N 24.303 61.528 3.719 0.309 -0.374 1.600 N9 CMP 13
CMP C8 C8 C 0 1 Y N N N N N 25.623 61.948 3.754 1.602 0.035 1.728 C8 CMP 14
CMP N7 N7 N 0 1 Y N N N N N 26.473 61.067 3.259 1.836 0.393 2.958 N7 CMP 15
CMP C5 C5 C 0 1 Y N N N N N 25.660 59.993 2.899 0.708 0.241 3.693 C5 CMP 16
CMP C6 C6 C 0 1 Y N N N N N 25.939 58.758 2.334 0.372 0.452 5.041 C6 CMP 17
CMP N6 N6 N 0 1 N N N N N N 27.173 58.368 2.015 1.309 0.938 5.937 N6 CMP 18
CMP N1 N1 N 0 1 Y N N N N N 24.912 57.922 2.097 -0.867 0.180 5.434 N1 CMP 19
CMP C2 C2 C 0 1 Y N N N N N 23.693 58.298 2.413 -1.767 -0.282 4.587 C2 CMP 20
CMP N3 N3 N 0 1 Y N N N N N 23.282 59.438 2.960 -1.496 -0.501 3.317 N3 CMP 21
CMP C4 C4 C 0 1 Y N N N N N 24.329 60.259 3.182 -0.282 -0.258 2.833 C4 CMP 22
CMP HOP2 2HOP H 0 0 N N N N N N 21.400 66.619 6.835 -0.136 0.638 -6.218 HOP2 CMP 23
CMP "H5'1" 1H5* H 0 0 N N N N N N 22.959 66.534 4.128 2.083 -0.554 -2.726 "H5'1" CMP 24
CMP "H5'2" 2H5* H 0 0 N N N N N N 24.413 65.707 3.884 1.706 -2.290 -2.899 "H5'2" CMP 25
CMP "H4'" H4* H 0 1 N N N N N N 21.796 64.749 4.871 -0.632 -1.772 -2.084 "H4'" CMP 26
CMP "H3'" H3* H 0 1 N N N N N N 24.471 63.518 6.123 0.687 0.973 -1.690 "H3'" CMP 27
CMP "H2'" H2* H 0 1 N N N N N N 23.219 61.440 6.226 -0.776 1.272 0.143 "H2'" CMP 28
CMP "HO2'" *HO2 H 0 0 N N N N N N 21.033 61.395 5.635 -2.775 0.159 0.259 "HO2'" CMP 29
CMP "H1'" H1* H 0 1 N N N N N N 22.248 61.623 3.654 -1.104 -1.580 0.616 "H1'" CMP 30
CMP H8 H8 H 0 1 N N N N N N 25.973 62.916 4.148 2.327 0.059 0.928 H8 CMP 31
CMP HN61 1HN6 H 0 0 N N N N N N 27.378 57.459 1.599 1.063 1.083 6.864 HN61 CMP 32
CMP HN62 2HN6 H 0 0 N N N N N N 27.747 58.456 2.853 2.212 1.129 5.639 HN62 CMP 33
CMP H2 H2 H 0 1 N N N N N N 22.908 57.556 2.188 -2.763 -0.490 4.948 H2 CMP 34
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
CMP P O1P DOUB N N 1
CMP P O2P SING N N 2
CMP P "O5'" SING N N 3
CMP P "O3'" SING N N 4
CMP O2P HOP2 SING N N 5
CMP "O5'" "C5'" SING N N 6
CMP "C5'" "C4'" SING N N 7
CMP "C5'" "H5'1" SING N N 8
CMP "C5'" "H5'2" SING N N 9
CMP "C4'" "O4'" SING N N 10
CMP "C4'" "C3'" SING N N 11
CMP "C4'" "H4'" SING N N 12
CMP "O4'" "C1'" SING N N 13
CMP "C3'" "O3'" SING N N 14
CMP "C3'" "C2'" SING N N 15
CMP "C3'" "H3'" SING N N 16
CMP "C2'" "O2'" SING N N 17
CMP "C2'" "C1'" SING N N 18
CMP "C2'" "H2'" SING N N 19
CMP "O2'" "HO2'" SING N N 20
CMP "C1'" N9 SING N N 21
CMP "C1'" "H1'" SING N N 22
CMP N9 C8 SING Y N 23
CMP N9 C4 SING Y N 24
CMP C8 N7 DOUB Y N 25
CMP C8 H8 SING N N 26
CMP N7 C5 SING Y N 27
CMP C5 C6 SING Y N 28
CMP C5 C4 DOUB Y N 29
CMP C6 N6 SING N N 30
CMP C6 N1 DOUB Y N 31
CMP N6 HN61 SING N N 32
CMP N6 HN62 SING N N 33
CMP N1 C2 SING Y N 34
CMP C2 N3 DOUB Y N 35
CMP C2 H2 SING N N 36
CMP N3 C4 SING Y N 37
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
CMP SMILES ACDLabs 10.04 O=P3(OCC4OC(n1c2ncnc(N)c2nc1)C(O)C4O3)O
CMP SMILES_CANONICAL CACTVS 3.341 Nc1ncnc2n(cnc12)[C@@H]3O[C@@H]4CO[P@](O)(=O)O[C@H]4[C@H]3O
CMP SMILES CACTVS 3.341 Nc1ncnc2n(cnc12)[CH]3O[CH]4CO[P](O)(=O)O[CH]4[CH]3O
CMP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@H]4[C@H](O3)CO[P@](=O)(O4)O)O)N
CMP SMILES "OpenEye OEToolkits" 1.5.0 c1nc(c2c(n1)n(cn2)C3C(C4C(O3)COP(=O)(O4)O)O)N
CMP InChI InChI 1.03 InChI=1S/C10H12N5O6P/c11-8-5-9(13-2-12-8)15(3-14-5)10-6(16)7-4(20-10)1-19-22(17,18)21-7/h2-4,6-7,10,16H,1H2,(H,17,18)(H2,11,12,13)/t4-,6-,7-,10-/m1/s1
CMP InChIKey InChI 1.03 IVOMOUWHDPKRLL-KQYNXXCUSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
CMP "SYSTEMATIC NAME" ACDLabs 10.04 "(2R,4aR,6R,7R,7aS)-6-(6-amino-9H-purin-9-yl)tetrahydro-4H-furo[3,2-d][1,3,2]dioxaphosphinine-2,7-diol 2-oxide"
CMP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 (1R,4R,6S,7R,8R)-8-(6-aminopurin-9-yl)-4-hydroxy-4-oxo-3,5,9-trioxa-4$l^{5}-phosphabicyclo[4.3.0]nonan-7-ol
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
CMP 'Create component' 1999-07-08 EBI
CMP 'Modify descriptor' 2011-06-04 RCSB
CMP 'Modify synonyms' 2020-05-28 PDBE
#
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1 CMP "CYCLIC AMP" ? ?
2 CMP CAMP ? ?
#
_pdbe_chem_comp_drugbank_details.comp_id CMP
_pdbe_chem_comp_drugbank_details.drugbank_id DB02527
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name 'Cyclic adenosine monophosphate'
_pdbe_chem_comp_drugbank_details.description
"Cyclic adenosine monophosphate (cAMP, cyclic AMP or 3'-5'-cyclic adenosine monophosphate) is a molecule that is important in many biological processes; it is derived from adenosine triphosphate (ATP)."
_pdbe_chem_comp_drugbank_details.cas_number 60-92-4
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
CMP 'CYCLIC AMP' wwPDB ?
CMP CAMP wwPDB ?
CMP "3',5'-cyclic AMP" DrugBank ?
CMP "Adenosine 3',5'-cyclic monophosphate" DrugBank ?
CMP "Adenosine 3',5'-cyclic phosphate" DrugBank ?
CMP "Adenosine 3',5'-phosphate" DrugBank ?
CMP AMPC DrugBank ?
CMP cAMP DrugBank ?
CMP 'Cyclic adenosine monophosphate' DrugBank ?
CMP 'Cyclic adenylic acid' DrugBank ?
CMP 'Cyclic AMP' DrugBank ?
#
_pdbe_chem_comp_drugbank_classification.comp_id CMP
_pdbe_chem_comp_drugbank_classification.drugbank_id DB02527
_pdbe_chem_comp_drugbank_classification.parent "3',5'-cyclic purine nucleotides"
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Purine nucleotides'
_pdbe_chem_comp_drugbank_classification.superclass 'Nucleosides, nucleotides, and analogues'
_pdbe_chem_comp_drugbank_classification.description
"This compound belongs to the class of organic compounds known as 3',5'-cyclic purine nucleotides. These are purine nucleotides in which the oxygen atoms linked to the C3 and C5 carbon atoms of the ribose moiety are both bonded the same phosphorus atom of the phosphate group."
#
loop_
_pdbe_chem_comp_drugbank_targets.comp_id
_pdbe_chem_comp_drugbank_targets.drugbank_id
_pdbe_chem_comp_drugbank_targets.name
_pdbe_chem_comp_drugbank_targets.organism
_pdbe_chem_comp_drugbank_targets.uniprot_id
_pdbe_chem_comp_drugbank_targets.pharmacologically_active
_pdbe_chem_comp_drugbank_targets.ordinal
CMP DB02527 'Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2' Humans Q9UL51 unknown 1
CMP DB02527 'cAMP-dependent protein kinase type I-alpha regulatory subunit' Humans P10644 unknown 2
CMP DB02527 'cAMP-dependent protein kinase type II-beta regulatory subunit' Humans P31323 unknown 3
CMP DB02527 'DNA-binding transcriptional dual regulator CRP' 'Escherichia coli (strain K12)' P0ACJ8 unknown 4
CMP DB02527 'Adenylate cyclase' 'Anabaena sp.' P94182 unknown 5
CMP DB02527 'Cyclic nucleotide-gated potassium channel mll3241' 'Rhizobium loti (strain MAFF303099)' Q98GN8 unknown 6
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
CMP P P 4.965 -0.338 1
CMP O1P O 3.465 -0.338 2
CMP O2P O 4.215 0.961 3
CMP "O5'" O 4.965 -1.838 4
CMP "C5'" C 6.264 -2.588 5
CMP "C4'" C 7.563 -1.838 6
CMP "O4'" O 8.982 -2.295 7
CMP "C3'" C 7.563 -0.338 8
CMP "O3'" O 6.264 0.412 9
CMP "C2'" C 8.982 0.119 10
CMP "O2'" O 9.448 1.545 11
CMP "C1'" C 9.858 -1.088 12
CMP N9 N 11.358 -1.088 13
CMP C8 C 12.233 -2.295 14
CMP N7 N 13.652 -1.838 15
CMP C5 C 13.659 -0.347 16
CMP C6 C 14.775 0.655 17
CMP N6 N 16.201 0.189 18
CMP N1 N 14.466 2.122 19
CMP C2 C 13.040 2.588 20
CMP N3 N 11.924 1.587 21
CMP C4 C 12.233 0.119 22
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
CMP P O1P DOUBLE NONE 1
CMP P O2P SINGLE BEGINWEDGE 2
CMP P "O5'" SINGLE NONE 3
CMP P "O3'" SINGLE NONE 4
CMP "O5'" "C5'" SINGLE NONE 5
CMP "C5'" "C4'" SINGLE NONE 6
CMP "C4'" "O4'" SINGLE NONE 7
CMP "C4'" "C3'" SINGLE NONE 8
CMP "O4'" "C1'" SINGLE NONE 9
CMP "C3'" "O3'" SINGLE NONE 10
CMP "C3'" "C2'" SINGLE NONE 11
CMP "C2'" "O2'" SINGLE BEGINWEDGE 12
CMP "C2'" "C1'" SINGLE NONE 13
CMP "C1'" N9 SINGLE BEGINDASH 14
CMP N9 C8 SINGLE NONE 15
CMP N9 C4 SINGLE NONE 16
CMP C8 N7 DOUBLE NONE 17
CMP N7 C5 SINGLE NONE 18
CMP C5 C6 DOUBLE NONE 19
CMP C5 C4 SINGLE NONE 20
CMP C6 N6 SINGLE NONE 21
CMP C6 N1 SINGLE NONE 22
CMP N1 C2 DOUBLE NONE 23
CMP C2 N3 SINGLE NONE 24
CMP N3 C4 DOUBLE NONE 25
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
CMP MurckoScaffold S1 scaffold 'O=[PH]1OC[C@H]2O[C@@H](n3cnc4cncnc43)C[C@@H]2O1' InChI=1S/C10H11N4O4P/c15-19-16-3-8-7(18-19)1-9(17-8)14-5-13-6-2-11-4-12-10(6)14/h2,4-5,7-9,19H,1,3H2/t7-,8+,9+/m0/s1 LQOCNOQFAOTVSI-DJLDLDEBSA-N
CMP adenine F1 fragment 'Nc1ncnc2nc[nH]c12' InChI=1S/C5H5N5/c6-4-3-5(9-1-7-3)10-2-8-4/h1-2H,(H3,6,7,8,9,10) GFFGJBXGBJISGV-UHFFFAOYSA-N
CMP imidazole F2 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
CMP phosphate F3 fragment O=P(O)(O)O InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4) NBIIXXVUZAFLBC-UHFFFAOYSA-N
CMP purine F4 fragment 'c1ncc2[nH]cnc2n1' InChI=1S/C5H4N4/c1-4-5(8-2-6-1)9-3-7-4/h1-3H,(H,6,7,8,9) KDCGOANMDULRCW-UHFFFAOYSA-N
CMP pyrimidine F5 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
CMP ribose F6 fragment OCC1OCC(O)C1O InChI=1S/C5H10O4/c6-1-4-5(8)3(7)2-9-4/h3-8H,1-2H2 KZVAAIRBJJYZOW-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
CMP P S1 1
CMP O1P S1 1
CMP "O5'" S1 1
CMP "C5'" S1 1
CMP "C4'" S1 1
CMP "O4'" S1 1
CMP "C3'" S1 1
CMP "O3'" S1 1
CMP "C2'" S1 1
CMP "C1'" S1 1
CMP N9 S1 1
CMP C8 S1 1
CMP N7 S1 1
CMP C5 S1 1
CMP C6 S1 1
CMP N1 S1 1
CMP C2 S1 1
CMP N3 S1 1
CMP C4 S1 1
CMP N1 F1 1
CMP C6 F1 1
CMP C5 F1 1
CMP C4 F1 1
CMP N3 F1 1
CMP C2 F1 1
CMP N9 F1 1
CMP C8 F1 1
CMP N7 F1 1
CMP N6 F1 1
CMP C5 F2 1
CMP C4 F2 1
CMP N9 F2 1
CMP C8 F2 1
CMP N7 F2 1
CMP O2P F3 1
CMP P F3 1
CMP O1P F3 1
CMP "O5'" F3 1
CMP "O3'" F3 1
CMP N7 F4 1
CMP C8 F4 1
CMP N9 F4 1
CMP C4 F4 1
CMP C5 F4 1
CMP C6 F4 1
CMP N1 F4 1
CMP C2 F4 1
CMP N3 F4 1
CMP C5 F5 1
CMP C6 F5 1
CMP N1 F5 1
CMP C2 F5 1
CMP N3 F5 1
CMP C4 F5 1
CMP "C2'" F6 1
CMP "C3'" F6 1
CMP "C4'" F6 1
CMP "O4'" F6 1
CMP "C1'" F6 1
CMP "C5'" F6 1
CMP "O5'" F6 1
CMP "O3'" F6 1
CMP "O2'" F6 1
#
_pdbe_chem_comp_rdkit_properties.comp_id CMP
_pdbe_chem_comp_rdkit_properties.exactmw 329.053
_pdbe_chem_comp_rdkit_properties.amw 329.209
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 11
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 4
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 4
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 11
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 22
_pdbe_chem_comp_rdkit_properties.NumAtoms 34
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 12
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.500
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 5
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 139.972
_pdbe_chem_comp_rdkit_properties.tpsa 154.840
_pdbe_chem_comp_rdkit_properties.CrippenClogP -1.626
_pdbe_chem_comp_rdkit_properties.CrippenMR 67.273
_pdbe_chem_comp_rdkit_properties.chi0v 11.027
_pdbe_chem_comp_rdkit_properties.chi1v 6.948
_pdbe_chem_comp_rdkit_properties.chi2v 3.392
_pdbe_chem_comp_rdkit_properties.chi3v 3.392
_pdbe_chem_comp_rdkit_properties.chi4v 2.407
_pdbe_chem_comp_rdkit_properties.chi0n 22.133
_pdbe_chem_comp_rdkit_properties.chi1n 11.198
_pdbe_chem_comp_rdkit_properties.chi2n 2.671
_pdbe_chem_comp_rdkit_properties.chi3n 2.671
_pdbe_chem_comp_rdkit_properties.chi4n 1.785
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.620
_pdbe_chem_comp_rdkit_properties.kappa1 6.115
_pdbe_chem_comp_rdkit_properties.kappa2 4.686
_pdbe_chem_comp_rdkit_properties.kappa3 2.024
_pdbe_chem_comp_rdkit_properties.Phi 1.302
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
CMP UniChem DrugBank DB02527
CMP UniChem 'Guide to Pharmacology' 2352
CMP UniChem 'Guide to Pharmacology' 5096
CMP UniChem 'KEGG LIGAND' C00575
CMP UniChem ChEBI 17489
CMP UniChem ZINC ZINC000003873977
CMP UniChem eMolecules 474950
CMP UniChem atlas cAMP
CMP UniChem fdasrs E0399OZS9N
CMP UniChem SureChEMBL SCHEMBL1244
CMP UniChem HMDB HMDB0000058
CMP UniChem 'PubChem TPHARMA' 15189713
CMP UniChem NMRShiftDB 60020908
CMP UniChem ACTor 11002-78-1
CMP UniChem ACTor 54532-48-8
CMP UniChem Nikkaji J4.811I
CMP UniChem BindingDb 10851
CMP UniChem BindingDb 50384264
CMP UniChem 'EPA CompTox Dashboard' DTXSID8040436
CMP UniChem MetaboLights MTBLC17489
CMP UniChem BRENDA 102164
CMP UniChem BRENDA 109775
CMP UniChem BRENDA 135757
CMP UniChem BRENDA 149147
CMP UniChem BRENDA 153381
CMP UniChem BRENDA 154365
CMP UniChem BRENDA 16561
CMP UniChem BRENDA 210657
CMP UniChem BRENDA 2119
CMP UniChem BRENDA 268
CMP UniChem BRENDA 34419
CMP UniChem BRENDA 43706
CMP UniChem BRENDA 49501
CMP UniChem BRENDA 5121
CMP UniChem BRENDA 5478
CMP UniChem BRENDA 7108
CMP UniChem BRENDA 92293
CMP UniChem BRENDA 92810
CMP UniChem BRENDA 92982
CMP UniChem BRENDA 969
CMP UniChem ChemicalBook CB8747868
CMP UniChem rxnorm 'CYCLIC AMP'
CMP UniChem MedChemExpress HY-B1511
CMP UniChem 'Probes And Drugs' PD002818
CMP UniChem CCDC ILITAA
CMP UniChem PubChem 6076
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
CMP P -4.435 -0.276 0.745 ETKDGv3 1
CMP O1P -5.187 -0.961 1.863 ETKDGv3 2
CMP O2P -5.533 0.273 -0.420 ETKDGv3 3
CMP "O5'" -3.555 1.051 1.382 ETKDGv3 4
CMP "C5'" -2.683 1.585 0.394 ETKDGv3 5
CMP "C4'" -1.964 0.522 -0.471 ETKDGv3 6
CMP "O4'" -0.599 0.789 -0.661 ETKDGv3 7
CMP "C3'" -2.061 -0.844 0.173 ETKDGv3 8
CMP "O3'" -3.352 -1.388 0.025 ETKDGv3 9
CMP "C2'" -0.984 -1.596 -0.569 ETKDGv3 10
CMP "O2'" -1.494 -2.182 -1.740 ETKDGv3 11
CMP "C1'" 0.001 -0.466 -0.934 ETKDGv3 12
CMP N9 1.245 -0.583 -0.173 ETKDGv3 13
CMP C8 1.374 -0.560 1.267 ETKDGv3 14
CMP N7 2.546 -0.190 1.715 ETKDGv3 15
CMP C5 3.317 0.091 0.556 ETKDGv3 16
CMP C6 4.530 0.628 0.440 ETKDGv3 17
CMP N6 5.339 0.922 1.579 ETKDGv3 18
CMP N1 4.994 0.935 -0.895 ETKDGv3 19
CMP C2 4.233 0.729 -1.946 ETKDGv3 20
CMP N3 2.900 0.188 -1.791 ETKDGv3 21
CMP C4 2.517 -0.129 -0.592 ETKDGv3 22
CMP HOP2 -6.030 1.004 0.027 ETKDGv3 23
CMP "H5'1" -3.253 2.279 -0.261 ETKDGv3 24
CMP "H5'2" -1.918 2.197 0.918 ETKDGv3 25
CMP "H4'" -2.461 0.496 -1.471 ETKDGv3 26
CMP "H3'" -1.773 -0.805 1.252 ETKDGv3 27
CMP "H2'" -0.511 -2.371 0.080 ETKDGv3 28
CMP "HO2'" -1.895 -3.051 -1.474 ETKDGv3 29
CMP "H1'" 0.240 -0.516 -2.020 ETKDGv3 30
CMP H8 0.561 -0.807 1.935 ETKDGv3 31
CMP HN61 5.008 0.710 2.547 ETKDGv3 32
CMP HN62 6.280 1.354 1.452 ETKDGv3 33
CMP H2 4.601 0.974 -2.932 ETKDGv3 34
#