data_CHC
#
_chem_comp.id CHC
_chem_comp.name "6-ETHYL-CHENODEOXYCHOLIC ACID"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C26 H44 O4"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2003-04-18
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces IU6
_chem_comp.formula_weight 420.625
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code CHC
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1OSV
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
CHC C1 C1 C 0 1 N N N N N N 18.043 15.416 56.772 -2.337 0.786 3.628 C1 CHC 1
CHC C2 C2 C 0 1 N N N N N N 17.890 15.684 55.231 -2.442 -0.686 4.026 C2 CHC 2
CHC C3 C3 C 0 1 N N R N N N 18.849 16.874 54.782 -1.339 -1.023 5.033 C3 CHC 3
CHC O3 O3 O 0 1 N N N N N N 18.714 17.118 53.418 -1.437 -2.400 5.403 O3 CHC 4
CHC C4 C4 C 0 1 N N N N N N 18.551 18.226 55.614 0.027 -0.760 4.398 C4 CHC 5
CHC C5 C5 C 0 1 N N S N N N 18.701 17.963 57.220 0.179 0.693 3.987 C5 CHC 6
CHC C6 C6 C 0 1 N N R N N N 18.394 19.238 58.110 1.553 0.887 3.343 C6 CHC 7
CHC C7 C7 C 0 1 N N R N N N 16.866 19.703 58.007 1.663 0.005 2.098 C7 CHC 8
CHC O7 O7 O 0 1 N N N N N N 16.517 20.249 56.681 1.502 -1.364 2.469 O7 CHC 9
CHC C8 C8 C 0 1 N N S N N N 15.872 18.539 58.395 0.572 0.395 1.099 C8 CHC 10
CHC C9 C9 C 0 1 N N S N N N 16.114 17.222 57.470 -0.803 0.181 1.750 C9 CHC 11
CHC C10 C10 C 0 1 N N S N N N 17.704 16.703 57.659 -0.970 1.051 2.996 C10 CHC 12
CHC C11 C11 C 0 1 N N N N N N 15.098 16.139 57.863 -1.963 0.455 0.747 C11 CHC 13
CHC C12 C12 C 0 1 N N N N N N 13.590 16.579 57.726 -1.793 -0.319 -0.569 C12 CHC 14
CHC C13 C13 C 0 1 N N R N N N 13.284 17.854 58.608 -0.428 0.031 -1.127 C13 CHC 15
CHC C14 C14 C 0 1 N N S N N N 14.343 18.954 58.233 0.653 -0.479 -0.137 C14 CHC 16
CHC C15 C15 C 0 1 N N N N N N 13.821 20.208 59.057 1.938 -0.355 -0.962 C15 CHC 17
CHC C16 C16 C 0 1 N N N N N N 12.383 20.209 58.617 1.498 -0.854 -2.366 C16 CHC 18
CHC C17 C17 C 0 1 N N R N N N 11.949 18.710 58.276 -0.034 -0.642 -2.444 C17 CHC 19
CHC C18 C18 C 0 1 N N N N N N 13.399 17.417 60.191 -0.298 1.549 -1.264 C18 CHC 20
CHC C19 C19 C 0 1 N N N N N N 17.988 16.179 59.053 -0.866 2.526 2.605 C19 CHC 21
CHC C20 C20 C 0 1 N N R N N N 10.602 18.275 59.040 -0.386 0.250 -3.636 C20 CHC 22
CHC C21 C21 C 0 1 N N N N N N 10.240 16.760 58.632 -1.898 0.476 -3.674 C21 CHC 23
CHC C22 C22 C 0 1 N N N N N N 9.440 19.182 58.656 0.060 -0.429 -4.931 C22 CHC 24
CHC C23 C23 C 0 1 N N N N N N 8.086 18.836 59.366 -0.290 0.463 -6.123 C23 CHC 25
CHC C24 C24 C 0 1 N N N N N N 6.910 19.692 59.025 0.149 -0.206 -7.399 C24 CHC 26
CHC C25 C25 C 0 1 N N N N N N 20.726 20.444 57.752 4.018 0.692 3.698 C25 CHC 27
CHC C26 C26 C 0 1 N N N N N N 19.195 20.408 57.601 2.644 0.498 4.342 C26 CHC 28
CHC OT1 OT1 O 0 1 N N N N N N 6.450 20.423 59.922 -0.057 0.397 -8.580 OT1 CHC 29
CHC OT2 OT2 O 0 1 N N N N N N 6.433 19.645 57.860 0.689 -1.286 -7.360 OT2 CHC 30
CHC HC11 1HC1 H 0 0 N N N N N N 17.430 14.539 57.088 -2.455 1.411 4.513 HC11 CHC 31
CHC HC12 2HC1 H 0 0 N N N N N N 19.058 15.022 57.010 -3.122 1.024 2.909 HC12 CHC 32
CHC HC21 1HC2 H 0 0 N N N N N N 18.060 14.761 54.628 -3.416 -0.872 4.479 HC21 CHC 33
CHC HC22 2HC2 H 0 0 N N N N N N 16.829 15.873 54.944 -2.328 -1.311 3.140 HC22 CHC 34
CHC HC3 HC3 H 0 1 N N N N N N 19.896 16.559 54.998 -1.454 -0.399 5.920 HC3 CHC 35
CHC HO3 HO3 H 0 1 N N N N N N 19.285 17.827 53.150 -2.311 -2.522 5.797 HO3 CHC 36
CHC HC41 1HC4 H 0 0 N N N N N N 19.193 19.071 55.272 0.812 -1.001 5.114 HC41 CHC 37
CHC HC42 2HC4 H 0 0 N N N N N N 17.555 18.657 55.357 0.141 -1.383 3.510 HC42 CHC 38
CHC HC5 HC5 H 0 1 N N N N N N 19.770 17.710 57.410 0.075 1.331 4.865 HC5 CHC 39
CHC HC6 HC6 H 0 1 N N N N N N 18.643 18.952 59.158 1.676 1.933 3.059 HC6 CHC 40
CHC HC7 HC7 H 0 1 N N N N N N 16.754 20.529 58.746 2.642 0.145 1.639 HC7 CHC 41
CHC HO7 HO7 H 0 1 N N N N N N 15.610 20.525 56.619 2.207 -1.569 3.098 HO7 CHC 42
CHC HC8 HC8 H 0 1 N N N N N N 16.084 18.318 59.467 0.688 1.442 0.818 HC8 CHC 43
CHC HC9 HC9 H 0 1 N N N N N N 15.959 17.457 56.391 -0.831 -0.867 2.045 HC9 CHC 44
CHC H111 1H11 H 0 0 N N N N N N 15.283 15.203 57.285 -1.948 1.524 0.537 H111 CHC 45
CHC H112 2H11 H 0 0 N N N N N N 15.302 15.770 58.895 -2.923 0.194 1.193 H112 CHC 46
CHC H121 1H12 H 0 0 N N N N N N 13.305 16.740 56.660 -2.569 -0.024 -1.275 H121 CHC 47
CHC H122 2H12 H 0 0 N N N N N N 12.895 15.740 57.963 -1.852 -1.391 -0.379 H122 CHC 48
CHC H14C CH14 H 0 0 N N N N N N 14.396 19.171 57.140 0.468 -1.521 0.123 H14C CHC 49
CHC H151 1H15 H 0 0 N N N N N N 13.997 20.179 60.157 2.268 0.682 -1.008 H151 CHC 50
CHC H152 2H15 H 0 0 N N N N N N 14.380 21.160 58.907 2.722 -0.992 -0.554 H152 CHC 51
CHC H161 1H16 H 0 0 N N N N N N 11.708 20.688 59.364 1.996 -0.274 -3.142 H161 CHC 52
CHC H162 2H16 H 0 0 N N N N N N 12.197 20.909 57.769 1.736 -1.912 -2.478 H162 CHC 53
CHC H17C CH17 H 0 0 N N N N N N 11.642 18.544 57.216 -0.544 -1.602 -2.528 H17C CHC 54
CHC H181 1H18 H 0 0 N N N N N N 13.183 18.316 60.813 -0.974 1.904 -2.042 H181 CHC 55
CHC H182 2H18 H 0 0 N N N N N N 12.747 16.548 60.447 -0.554 2.022 -0.316 H182 CHC 56
CHC H183 3H18 H 0 0 N N N N N N 14.379 16.946 60.438 0.727 1.803 -1.530 H183 CHC 57
CHC H191 1H19 H 0 0 N N N N N N 17.751 17.076 59.671 -0.985 3.147 3.493 H191 CHC 58
CHC H192 2H19 H 0 0 N N N N N N 17.444 15.247 59.334 0.109 2.716 2.158 H192 CHC 59
CHC H193 3H19 H 0 0 N N N N N N 19.005 15.747 59.204 -1.648 2.767 1.886 H193 CHC 60
CHC H20C CH20 H 0 0 N N N N N N 10.770 18.359 60.139 0.122 1.208 -3.534 H20C CHC 61
CHC H211 1H21 H 0 0 N N N N N N 9.306 16.458 59.161 -2.407 -0.481 -3.776 H211 CHC 62
CHC H212 2H21 H 0 0 N N N N N N 10.166 16.622 57.528 -2.217 0.961 -2.751 H212 CHC 63
CHC H213 3H21 H 0 0 N N N N N N 11.083 16.055 58.820 -2.149 1.112 -4.523 H213 CHC 64
CHC H221 1H22 H 0 0 N N N N N N 9.707 20.250 58.828 1.138 -0.590 -4.904 H221 CHC 65
CHC H222 2H22 H 0 0 N N N N N N 9.306 19.195 57.549 -0.447 -1.388 -5.033 H222 CHC 66
CHC H231 1H23 H 0 0 N N N N N N 7.833 17.765 59.186 -1.368 0.624 -6.151 H231 CHC 67
CHC H232 2H23 H 0 0 N N N N N N 8.234 18.828 60.471 0.217 1.422 -6.022 H232 CHC 68
CHC H251 1H25 H 0 0 N N N N N N 21.318 21.309 57.375 4.795 0.415 4.410 H251 CHC 69
CHC H252 2H25 H 0 0 N N N N N N 20.971 20.298 58.829 4.096 0.064 2.811 H252 CHC 70
CHC H253 3H25 H 0 0 N N N N N N 21.141 19.515 57.296 4.142 1.738 3.414 H253 CHC 71
CHC H261 1H26 H 0 0 N N N N N N 18.949 20.553 56.523 2.520 -0.547 4.625 H261 CHC 72
CHC H262 2H26 H 0 0 N N N N N N 18.779 21.337 58.056 2.566 1.127 5.229 H262 CHC 73
CHC HT1O OHT1 H 0 0 N N N N N N 5.702 20.967 59.705 0.224 -0.031 -9.399 HT1O CHC 74
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
CHC C1 C2 SING N N 1
CHC C1 C10 SING N N 2
CHC C1 HC11 SING N N 3
CHC C1 HC12 SING N N 4
CHC C2 C3 SING N N 5
CHC C2 HC21 SING N N 6
CHC C2 HC22 SING N N 7
CHC C3 O3 SING N N 8
CHC C3 C4 SING N N 9
CHC C3 HC3 SING N N 10
CHC O3 HO3 SING N N 11
CHC C4 C5 SING N N 12
CHC C4 HC41 SING N N 13
CHC C4 HC42 SING N N 14
CHC C5 C6 SING N N 15
CHC C5 C10 SING N N 16
CHC C5 HC5 SING N N 17
CHC C6 C7 SING N N 18
CHC C6 C26 SING N N 19
CHC C6 HC6 SING N N 20
CHC C7 O7 SING N N 21
CHC C7 C8 SING N N 22
CHC C7 HC7 SING N N 23
CHC O7 HO7 SING N N 24
CHC C8 C9 SING N N 25
CHC C8 C14 SING N N 26
CHC C8 HC8 SING N N 27
CHC C9 C10 SING N N 28
CHC C9 C11 SING N N 29
CHC C9 HC9 SING N N 30
CHC C10 C19 SING N N 31
CHC C11 C12 SING N N 32
CHC C11 H111 SING N N 33
CHC C11 H112 SING N N 34
CHC C12 C13 SING N N 35
CHC C12 H121 SING N N 36
CHC C12 H122 SING N N 37
CHC C13 C14 SING N N 38
CHC C13 C17 SING N N 39
CHC C13 C18 SING N N 40
CHC C14 C15 SING N N 41
CHC C14 H14C SING N N 42
CHC C15 C16 SING N N 43
CHC C15 H151 SING N N 44
CHC C15 H152 SING N N 45
CHC C16 C17 SING N N 46
CHC C16 H161 SING N N 47
CHC C16 H162 SING N N 48
CHC C17 C20 SING N N 49
CHC C17 H17C SING N N 50
CHC C18 H181 SING N N 51
CHC C18 H182 SING N N 52
CHC C18 H183 SING N N 53
CHC C19 H191 SING N N 54
CHC C19 H192 SING N N 55
CHC C19 H193 SING N N 56
CHC C20 C21 SING N N 57
CHC C20 C22 SING N N 58
CHC C20 H20C SING N N 59
CHC C21 H211 SING N N 60
CHC C21 H212 SING N N 61
CHC C21 H213 SING N N 62
CHC C22 C23 SING N N 63
CHC C22 H221 SING N N 64
CHC C22 H222 SING N N 65
CHC C23 C24 SING N N 66
CHC C23 H231 SING N N 67
CHC C23 H232 SING N N 68
CHC C24 OT1 SING N N 69
CHC C24 OT2 DOUB N N 70
CHC C25 C26 SING N N 71
CHC C25 H251 SING N N 72
CHC C25 H252 SING N N 73
CHC C25 H253 SING N N 74
CHC C26 H261 SING N N 75
CHC C26 H262 SING N N 76
CHC OT1 HT1O SING N N 77
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
CHC SMILES ACDLabs 10.04 O=C(O)CCC(C4C3(C(C1C(C2(C(C(CC)C1O)CC(O)CC2)C)CC3)CC4)C)C
CHC SMILES_CANONICAL CACTVS 3.341 CC[C@H]1[C@@H](O)[C@H]2[C@@H]3CC[C@H]([C@H](C)CCC(O)=O)[C@@]3(C)CC[C@@H]2[C@@]4(C)CC[C@@H](O)C[C@@H]14
CHC SMILES CACTVS 3.341 CC[CH]1[CH](O)[CH]2[CH]3CC[CH]([CH](C)CCC(O)=O)[C]3(C)CC[CH]2[C]4(C)CC[CH](O)C[CH]14
CHC SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 CC[C@@H]1[C@@H]2C[C@@H](CC[C@@]2([C@H]3CC[C@]4([C@H]([C@@H]3[C@@H]1O)CC[C@@H]4[C@H](C)CCC(=O)O)C)C)O
CHC SMILES "OpenEye OEToolkits" 1.5.0 CCC1C2CC(CCC2(C3CCC4(C(C3C1O)CCC4C(C)CCC(=O)O)C)C)O
CHC InChI InChI 1.03 InChI=1S/C26H44O4/c1-5-17-21-14-16(27)10-12-26(21,4)20-11-13-25(3)18(15(2)6-9-22(28)29)7-8-19(25)23(20)24(17)30/h15-21,23-24,27,30H,5-14H2,1-4H3,(H,28,29)/t15-,16-,17-,18-,19+,20+,21+,23+,24-,25-,26-/m1/s1
CHC InChIKey InChI 1.03 ZXERDUOLZKYMJM-ZWECCWDJSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
CHC "SYSTEMATIC NAME" ACDLabs 10.04 "(3beta,5beta,6alpha,7beta)-6-ethyl-3,7-dihydroxycholan-24-oic acid"
CHC "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(4R)-4-[(3R,5S,6R,7R,8S,9S,10S,13R,14S,17R)-6-ethyl-3,7-dihydroxy-10,13-dimethyl-2,3,4,5,6,7,8,9,11,12,14,15,16,17-tetradecahydro-1H-cyclopenta[a]phenanthren-17-yl]pentanoic acid"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
CHC 'Create component' 2003-04-18 RCSB
CHC 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id CHC
_pdbe_chem_comp_drugbank_details.drugbank_id DB05990
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name 'Obeticholic acid'
_pdbe_chem_comp_drugbank_details.description
'Primary biliary cirrhosis, or PBC, is a progressive and chronic condition that leads to hepatic injury often resulting in end-stage liver failure that requires liver transplantation.[A192786]  Obeticholic acid is a farnesoid-X receptor (FXR) agonist used to treat this condition, possibly allowing for increased survival.[A18696]  In 2016, it was granted approval to treat primary biliary cholangitis in combination with [ursodeoxycholic acid], which was previously the mainstay treatment for this condition.[A18696,L12633] In May 2021, the FDA updated its prescribing information to contraindicate the use of obeticholic acid in patients with PBC and advanced cirrhosis (e.g. those with portal hypertension or hepatic decompensation) due to a risk of liver failure, in some cases requiring liver transplantation.[L34650]   Obeticholic acid is currently being considered for FDA approval to treat fibrosis caused by non-alcoholic liver steatohepatitis (NASH). The NDA from Intercept Pharmaceuticals was approved in November 2019 and obeticholic acid is expected to be granted full approval for this indication in 2020.[L12636]'
_pdbe_chem_comp_drugbank_details.cas_number 459789-99-2
_pdbe_chem_comp_drugbank_details.mechanism_of_action
'Primary biliary cirrhosis is an autoimmune process by which the bile ducts and liver are damaged progressively, leading to fibrosis and cirrhosis. Bile acids increase the risk of damage and fibrosis to the damaged bile ducts.[A192786,A192795]    Obeticholic acid is a potent agonist of the farnesoid X receptor, which serves to regulate the hepatic metabolism of bile and cholesterol. This drug acts by binding to the farnesoid X receptor (FXR), found in the nucleus of liver and intestinal cells, which in turn increases liver bile flow, suppressing its production and decreasing hepatocyte exposure to excess levels of bile with cholestasis. Cholestasis is a process that normally causes inflammation and cirrhosis of the liver.[A192792,L12633]'
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
CHC '(3α,5β,6α,7α)-6-ethyl-3,7-dihydroxycholan-24-oic acid' DrugBank ?
CHC '6-alpha-ethylchenodeoxycholic acid' DrugBank ?
CHC 6-ECDCA DrugBank ?
CHC 6-Ethyl-CDCA DrugBank ?
CHC '6-ethylchenodeoxycholic acid' DrugBank ?
CHC '6alpha-Ethyl-chenodeoxycholic acid' DrugBank ?
CHC '6α-ethylchenodeoxycholic acid' DrugBank ?
CHC 'Obeticholic acid' DrugBank ?
CHC Ocaliva DrugBank 'International brand'
#
_pdbe_chem_comp_drugbank_classification.comp_id CHC
_pdbe_chem_comp_drugbank_classification.drugbank_id DB05990
_pdbe_chem_comp_drugbank_classification.parent 'Dihydroxy bile acids, alcohols and derivatives'
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Steroids and steroid derivatives'
_pdbe_chem_comp_drugbank_classification.superclass 'Lipids and lipid-like molecules'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as dihydroxy bile acids, alcohols and derivatives. These are compounds containing or derived from a bile acid or alcohol, and which bears exactly two carboxylic acid groups.'
#
_pdbe_chem_comp_drugbank_targets.comp_id CHC
_pdbe_chem_comp_drugbank_targets.drugbank_id DB05990
_pdbe_chem_comp_drugbank_targets.name 'Bile acid receptor'
_pdbe_chem_comp_drugbank_targets.organism Humans
_pdbe_chem_comp_drugbank_targets.uniprot_id Q96RI1
_pdbe_chem_comp_drugbank_targets.pharmacologically_active yes
_pdbe_chem_comp_drugbank_targets.ordinal 1
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
CHC C1 C 6.540 -0.757 1
CHC C2 C 5.118 -1.549 2
CHC C3 C 5.106 -3.177 3
CHC O3 O 3.804 -3.921 4
CHC C4 C 6.515 -3.990 5
CHC C5 C 7.918 -3.166 6
CHC C6 C 9.271 -3.947 7
CHC C7 C 10.618 -3.155 8
CHC O7 O 11.926 -3.890 9
CHC C8 C 10.594 -1.593 10
CHC C9 C 9.295 -0.843 11
CHC C10 C 7.930 -1.603 12
CHC C11 C 9.295 0.657 13
CHC C12 C 10.594 1.407 14
CHC C13 C 11.893 0.657 15
CHC C14 C 11.893 -0.843 16
CHC C15 C 13.312 -1.300 17
CHC C16 C 14.188 -0.093 18
CHC C17 C 13.312 1.114 19
CHC C18 C 11.893 2.157 20
CHC C19 C 7.942 -0.103 21
CHC C20 C 13.779 2.540 22
CHC C21 C 12.777 3.656 23
CHC C22 C 15.246 2.849 24
CHC C23 C 15.712 4.275 25
CHC C24 C 17.180 4.584 26
CHC C25 C 7.981 -6.202 27
CHC C26 C 9.277 -5.447 28
CHC OT1 O 17.646 6.010 29
CHC OT2 O 18.182 3.468 30
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
CHC C1 C2 SINGLE NONE 1
CHC C1 C10 SINGLE NONE 2
CHC C2 C3 SINGLE NONE 3
CHC C3 O3 SINGLE BEGINDASH 4
CHC C3 C4 SINGLE NONE 5
CHC C4 C5 SINGLE NONE 6
CHC C5 C6 SINGLE NONE 7
CHC C5 C10 SINGLE NONE 8
CHC C6 C7 SINGLE NONE 9
CHC C6 C26 SINGLE BEGINDASH 10
CHC C7 O7 SINGLE BEGINDASH 11
CHC C7 C8 SINGLE NONE 12
CHC C8 C9 SINGLE NONE 13
CHC C8 C14 SINGLE NONE 14
CHC C9 C10 SINGLE NONE 15
CHC C9 C11 SINGLE NONE 16
CHC C10 C19 SINGLE BEGINWEDGE 17
CHC C11 C12 SINGLE NONE 18
CHC C12 C13 SINGLE NONE 19
CHC C13 C14 SINGLE NONE 20
CHC C13 C17 SINGLE NONE 21
CHC C13 C18 SINGLE BEGINWEDGE 22
CHC C14 C15 SINGLE NONE 23
CHC C15 C16 SINGLE NONE 24
CHC C17 C16 SINGLE BEGINWEDGE 25
CHC C17 C20 SINGLE NONE 26
CHC C20 C21 SINGLE BEGINDASH 27
CHC C20 C22 SINGLE NONE 28
CHC C22 C23 SINGLE NONE 29
CHC C23 C24 SINGLE NONE 30
CHC C24 OT1 SINGLE NONE 31
CHC C24 OT2 DOUBLE NONE 32
CHC C25 C26 SINGLE NONE 33
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
CHC MurckoScaffold S1 scaffold 'C1CC[C@H]2CC[C@H]3[C@@H]4CCCC4CC[C@@H]3C2C1' InChI=1S/C17H28/c1-2-6-14-12(4-1)8-10-17-15-7-3-5-13(15)9-11-16(14)17/h12-17H,1-11H2/t12-,13-,14-,15+,16+,17-/m0/s1 UACIBCPNAKBWHX-ROIMOXLHSA-N
CHC cyclohexane F1 fragment C1CCCCC1 InChI=1S/C6H12/c1-2-4-6-5-3-1/h1-6H2 XDTMQSROBMDMFD-UHFFFAOYSA-N
CHC cyclopentane F2 fragment C1CCCC1 InChI=1S/C5H10/c1-2-4-5-3-1/h1-5H2 RGSFGYAAUTVSQA-UHFFFAOYSA-N
CHC steroid-like F3 fragment C1~C~C~C2~C(~C~1)~C~C~C1~C3~C~C~C~C~3~C~C~C~2~1 ? ?
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
CHC C1 S1 1
CHC C2 S1 1
CHC C3 S1 1
CHC C4 S1 1
CHC C5 S1 1
CHC C6 S1 1
CHC C7 S1 1
CHC C8 S1 1
CHC C9 S1 1
CHC C10 S1 1
CHC C11 S1 1
CHC C12 S1 1
CHC C13 S1 1
CHC C14 S1 1
CHC C15 S1 1
CHC C16 S1 1
CHC C17 S1 1
CHC C1 F1 1
CHC C2 F1 1
CHC C3 F1 1
CHC C4 F1 1
CHC C5 F1 1
CHC C10 F1 1
CHC C5 F1 2
CHC C6 F1 2
CHC C7 F1 2
CHC C8 F1 2
CHC C9 F1 2
CHC C10 F1 2
CHC C8 F1 3
CHC C9 F1 3
CHC C11 F1 3
CHC C12 F1 3
CHC C13 F1 3
CHC C14 F1 3
CHC C13 F2 1
CHC C14 F2 1
CHC C15 F2 1
CHC C16 F2 1
CHC C17 F2 1
CHC C2 F3 1
CHC C3 F3 1
CHC C4 F3 1
CHC C5 F3 1
CHC C10 F3 1
CHC C1 F3 1
CHC C9 F3 1
CHC C8 F3 1
CHC C7 F3 1
CHC C6 F3 1
CHC C14 F3 1
CHC C13 F3 1
CHC C12 F3 1
CHC C11 F3 1
CHC C17 F3 1
CHC C16 F3 1
CHC C15 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id CHC
_pdbe_chem_comp_rdkit_properties.exactmw 420.324
_pdbe_chem_comp_rdkit_properties.amw 420.634
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 4
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 11
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 4
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 30
_pdbe_chem_comp_rdkit_properties.NumAtoms 74
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 4
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.962
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 4
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 4
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 11
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 244.462
_pdbe_chem_comp_rdkit_properties.tpsa 77.760
_pdbe_chem_comp_rdkit_properties.CrippenClogP 5.114
_pdbe_chem_comp_rdkit_properties.CrippenMR 117.811
_pdbe_chem_comp_rdkit_properties.chi0v 14.633
_pdbe_chem_comp_rdkit_properties.chi1v 8.066
_pdbe_chem_comp_rdkit_properties.chi2v 4.658
_pdbe_chem_comp_rdkit_properties.chi3v 4.658
_pdbe_chem_comp_rdkit_properties.chi4v 3.337
_pdbe_chem_comp_rdkit_properties.chi0n 58.633
_pdbe_chem_comp_rdkit_properties.chi1n 29.791
_pdbe_chem_comp_rdkit_properties.chi2n 4.658
_pdbe_chem_comp_rdkit_properties.chi3n 4.658
_pdbe_chem_comp_rdkit_properties.chi4n 3.337
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.610
_pdbe_chem_comp_rdkit_properties.kappa1 4.059
_pdbe_chem_comp_rdkit_properties.kappa2 8.065
_pdbe_chem_comp_rdkit_properties.kappa3 3.356
_pdbe_chem_comp_rdkit_properties.Phi 1.091
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
CHC UniChem DrugBank DB05990
CHC UniChem 'Guide to Pharmacology' 3435
CHC UniChem 'PubChem DOTF' 123055342
CHC UniChem 'KEGG LIGAND' C15636
CHC UniChem ChEBI 43602
CHC UniChem ZINC ZINC000014164617
CHC UniChem fdasrs 0462Z4S4OZ
CHC UniChem ACTor 459789-99-2
CHC UniChem BindingDb 21675
CHC UniChem DrugCentral 5155
CHC UniChem DailyMed 'OBETICHOLIC ACID'
CHC UniChem ClinicalTrials DSP-1747
CHC UniChem ClinicalTrials INT-747
CHC UniChem ClinicalTrials 'OBETICHOLIC ACID'
CHC UniChem rxnorm 'OBETICHOLIC ACID'
CHC UniChem rxnorm OCALIVA
CHC UniChem MedChemExpress HY-12222
CHC UniChem 'Probes And Drugs' PD013001
CHC UniChem CCDC PELLAX
CHC UniChem SureChEMBL SCHEMBL715823
CHC UniChem 'PubChem TPHARMA' 14880306
CHC UniChem 'PubChem TPHARMA' 16101459
CHC UniChem PubChem 447715
CHC UniChem ACTor 865244-30-0
CHC UniChem Nikkaji J2.007.345D
CHC UniChem 'EPA CompTox Dashboard' DTXSID20196671
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
CHC C1 -3.241 1.670 -1.157 ETKDGv3 1
CHC C2 -4.751 1.370 -1.148 ETKDGv3 2
CHC C3 -5.391 1.396 0.247 ETKDGv3 3
CHC O3 -6.753 1.055 0.172 ETKDGv3 4
CHC C4 -4.661 0.509 1.290 ETKDGv3 5
CHC C5 -3.193 0.125 0.925 ETKDGv3 6
CHC C6 -3.003 -1.368 0.417 ETKDGv3 7
CHC C7 -1.734 -1.568 -0.443 ETKDGv3 8
CHC O7 -2.007 -1.306 -1.800 ETKDGv3 9
CHC C8 -0.608 -0.652 0.076 ETKDGv3 10
CHC C9 -0.939 0.827 -0.289 ETKDGv3 11
CHC C10 -2.431 1.266 0.131 ETKDGv3 12
CHC C11 0.228 1.782 0.129 ETKDGv3 13
CHC C12 1.617 1.320 -0.382 ETKDGv3 14
CHC C13 1.922 -0.142 0.032 ETKDGv3 15
CHC C14 0.774 -1.011 -0.521 ETKDGv3 16
CHC C15 1.282 -2.441 -0.417 ETKDGv3 17
CHC C16 2.779 -2.324 -0.741 ETKDGv3 18
CHC C17 3.130 -0.812 -0.694 ETKDGv3 19
CHC C18 2.079 -0.231 1.579 ETKDGv3 20
CHC C19 -2.372 2.522 1.064 ETKDGv3 21
CHC C20 4.615 -0.508 -0.282 ETKDGv3 22
CHC C21 5.072 -1.005 1.110 ETKDGv3 23
CHC C22 4.971 0.986 -0.480 ETKDGv3 24
CHC C23 6.484 1.220 -0.594 ETKDGv3 25
CHC C24 6.771 2.667 -0.841 ETKDGv3 26
CHC C25 -4.829 -3.165 0.713 ETKDGv3 27
CHC C26 -4.236 -2.100 -0.214 ETKDGv3 28
CHC OT1 6.892 3.542 0.234 ETKDGv3 29
CHC OT2 6.861 3.102 -2.020 ETKDGv3 30
CHC HC11 -2.854 1.154 -2.060 ETKDGv3 31
CHC HC12 -3.095 2.751 -1.373 ETKDGv3 32
CHC HC21 -4.931 0.397 -1.643 ETKDGv3 33
CHC HC22 -5.265 2.123 -1.786 ETKDGv3 34
CHC HC3 -5.359 2.449 0.594 ETKDGv3 35
CHC HO3 -6.817 0.132 -0.188 ETKDGv3 36
CHC HC41 -5.259 -0.390 1.535 ETKDGv3 37
CHC HC42 -4.651 1.073 2.249 ETKDGv3 38
CHC HC5 -2.681 0.111 1.917 ETKDGv3 39
CHC HC6 -2.770 -1.939 1.348 ETKDGv3 40
CHC HC7 -1.432 -2.635 -0.324 ETKDGv3 41
CHC HO7 -1.379 -1.856 -2.336 ETKDGv3 42
CHC HC8 -0.568 -0.775 1.176 ETKDGv3 43
CHC HC9 -0.872 0.876 -1.397 ETKDGv3 44
CHC H111 0.053 2.789 -0.305 ETKDGv3 45
CHC H112 0.269 1.894 1.231 ETKDGv3 46
CHC H121 2.382 2.011 0.024 ETKDGv3 47
CHC H122 1.643 1.419 -1.490 ETKDGv3 48
CHC H14C 0.692 -0.818 -1.620 ETKDGv3 49
CHC H151 0.772 -3.108 -1.146 ETKDGv3 50
CHC H152 1.129 -2.835 0.611 ETKDGv3 51
CHC H161 2.981 -2.726 -1.758 ETKDGv3 52
CHC H162 3.356 -2.939 -0.024 ETKDGv3 53
CHC H17C 3.067 -0.477 -1.758 ETKDGv3 54
CHC H181 2.841 0.494 1.924 ETKDGv3 55
CHC H182 1.161 0.038 2.131 ETKDGv3 56
CHC H183 2.365 -1.251 1.907 ETKDGv3 57
CHC H191 -1.900 3.389 0.559 ETKDGv3 58
CHC H192 -3.368 2.877 1.375 ETKDGv3 59
CHC H193 -1.816 2.299 1.999 ETKDGv3 60
CHC H20C 5.225 -1.081 -1.018 ETKDGv3 61
CHC H211 6.160 -1.222 1.085 ETKDGv3 62
CHC H212 4.573 -1.937 1.428 ETKDGv3 63
CHC H213 4.920 -0.239 1.896 ETKDGv3 64
CHC H221 4.493 1.362 -1.412 ETKDGv3 65
CHC H222 4.581 1.581 0.372 ETKDGv3 66
CHC H231 6.992 0.914 0.345 ETKDGv3 67
CHC H232 6.901 0.615 -1.428 ETKDGv3 68
CHC H251 -5.137 -2.719 1.682 ETKDGv3 69
CHC H252 -5.720 -3.623 0.235 ETKDGv3 70
CHC H253 -4.081 -3.964 0.904 ETKDGv3 71
CHC H261 -5.043 -1.408 -0.492 ETKDGv3 72
CHC H262 -3.958 -2.624 -1.154 ETKDGv3 73
CHC HT1O 7.069 4.529 0.084 ETKDGv3 74
#