data_C7Z
#
_chem_comp.id C7Z
_chem_comp.name
(1~{S})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C40 H56 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2017-11-17
_chem_comp.pdbx_modified_date 2018-02-16
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 568.871
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code C7Z
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5OY0
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
C7Z C6 C1 C 0 1 N N N N N N 219.560 -96.133 70.609 -11.428 -0.257 0.075 C6 C7Z 1
C7Z C17 C2 C 0 1 N N N N N N 217.664 -97.480 71.214 -12.339 -2.158 -1.219 C17 C7Z 2
C7Z C4 C3 C 0 1 N N N N N N 219.543 -93.664 70.949 -13.022 1.368 1.088 C4 C7Z 3
C7Z C3 C4 C 0 1 N N S N N N 218.035 -93.705 70.749 -13.763 1.268 -0.247 C3 C7Z 4
C7Z O3 O1 O 0 1 N N N N N N 217.446 -92.624 71.478 -15.098 1.752 -0.091 O3 C7Z 5
C7Z C2 C5 C 0 1 N N N N N N 217.483 -95.002 71.300 -13.796 -0.204 -0.677 C2 C7Z 6
C7Z C1 C6 C 0 1 N N N N N N 218.060 -96.181 70.540 -12.372 -0.640 -1.027 C1 C7Z 7
C7Z C5 C7 C 0 1 N N N N N N 220.242 -94.998 70.805 -11.714 0.635 1.009 C5 C7Z 8
C7Z C18 C8 C 0 1 N N N N N N 221.736 -94.948 70.942 -10.669 0.931 2.053 C18 C7Z 9
C7Z C16 C9 C 0 1 N N N N N N 217.571 -96.189 69.099 -11.940 0.044 -2.326 C16 C7Z 10
C7Z O23 O2 O 0 1 N N N N N N 239.597 -112.244 68.351 15.089 -1.762 -0.173 O23 C7Z 11
C7Z C26 C10 C 0 1 N N N N N N 238.225 -109.218 68.074 11.431 0.257 0.096 C26 C7Z 12
C7Z C7 C11 C 0 1 N N N N N N 220.242 -97.434 70.475 -10.160 -0.890 0.121 C7 C7Z 13
C7Z C8 C12 C 0 1 N N N N N N 221.068 -97.854 69.528 -9.026 -0.141 0.108 C8 C7Z 14
C7Z C9 C13 C 0 1 N N N N N N 221.620 -99.213 69.615 -7.769 -0.770 0.129 C9 C7Z 15
C7Z C19 C14 C 0 1 N N N N N N 220.842 -100.322 70.261 -7.679 -2.274 0.164 C19 C7Z 16
C7Z C10 C15 C 0 1 N N N N N N 222.828 -99.429 69.097 -6.629 -0.018 0.117 C10 C7Z 17
C7Z C11 C16 C 0 1 N N N N N N 223.586 -100.667 69.048 -5.376 -0.645 0.137 C11 C7Z 18
C7Z C12 C17 C 0 1 N N N N N N 224.903 -100.636 68.918 -4.227 0.113 0.125 C12 C7Z 19
C7Z C13 C18 C 0 1 N N N N N N 225.668 -101.886 68.853 -2.975 -0.513 0.145 C13 C7Z 20
C7Z C20 C19 C 0 1 N N N N N N 225.025 -103.197 69.186 -2.885 -2.017 0.181 C20 C7Z 21
C7Z C14 C20 C 0 1 N N N N N N 226.947 -101.838 68.479 -1.824 0.246 0.133 C14 C7Z 22
C7Z C15 C21 C 0 1 N N N N N N 227.847 -102.969 68.340 -0.573 -0.379 0.153 C15 C7Z 23
C7Z C35 C22 C 0 1 N N N N N N 229.125 -102.827 68.027 0.578 0.380 0.141 C35 C7Z 24
C7Z C34 C23 C 0 1 N N N N N N 229.959 -104.009 67.880 1.829 -0.246 0.161 C34 C7Z 25
C7Z C33 C24 C 0 1 N N N N N N 231.277 -104.064 68.072 2.979 0.513 0.149 C33 C7Z 26
C7Z C40 C25 C 0 1 N N N N N N 232.016 -102.830 68.496 2.889 2.017 0.113 C40 C7Z 27
C7Z C32 C26 C 0 1 N N N N N N 232.010 -105.325 67.873 4.231 -0.112 0.169 C32 C7Z 28
C7Z C31 C27 C 0 1 N N N N N N 233.184 -105.451 68.476 5.380 0.646 0.157 C31 C7Z 29
C7Z C30 C28 C 0 1 N N N N N N 233.999 -106.650 68.333 6.634 0.019 0.177 C30 C7Z 30
C7Z C29 C29 C 0 1 N N N N N N 235.329 -106.663 68.475 7.773 0.771 0.165 C29 C7Z 31
C7Z C39 C30 C 0 1 N N N N N N 236.037 -105.384 68.810 7.683 2.275 0.129 C39 C7Z 32
C7Z C28 C31 C 0 1 N N N N N N 236.103 -107.906 68.310 9.030 0.142 0.185 C28 C7Z 33
C7Z C27 C32 C 0 1 N N N N N N 237.438 -107.966 68.251 10.165 0.891 0.173 C27 C7Z 34
C7Z C21 C33 C 0 1 N N N N N N 238.538 -109.550 66.614 12.348 0.644 -1.028 C21 C7Z 35
C7Z C36 C34 C 0 1 N N N N N N 237.393 -109.215 65.659 11.880 -0.030 -2.319 C36 C7Z 36
C7Z C37 C35 C 0 1 N N N N N N 239.711 -108.659 66.228 12.318 2.163 -1.208 C37 C7Z 37
C7Z C22 C36 C 0 1 N N N N N N 238.950 -111.006 66.384 13.779 0.201 -0.715 C22 C7Z 38
C7Z C23 C37 C 0 1 N N S N N N 238.512 -112.012 67.446 13.752 -1.273 -0.292 C23 C7Z 39
C7Z C24 C38 C 0 1 N N N N N N 237.320 -111.474 68.218 13.044 -1.377 1.061 C24 C7Z 40
C7Z C25 C39 C 0 1 N N N N N N 237.761 -110.217 68.842 11.739 -0.636 1.021 C25 C7Z 41
C7Z C38 C40 C 0 1 N N N N N N 237.703 -110.134 70.341 10.721 -0.931 2.092 C38 C7Z 42
C7Z H1 H1 H 0 1 N N N N N N 218.017 -97.476 72.256 -12.673 -2.647 -0.303 H1 C7Z 43
C7Z H2 H2 H 0 1 N N N N N N 216.569 -97.582 71.198 -12.999 -2.435 -2.040 H2 C7Z 44
C7Z H3 H3 H 0 1 N N N N N N 218.119 -98.325 70.677 -11.321 -2.473 -1.448 H3 C7Z 45
C7Z H4 H4 H 0 1 N N N N N N 219.968 -92.974 70.205 -12.835 2.416 1.320 H4 C7Z 46
C7Z H5 H5 H 0 1 N N N N N N 219.743 -93.281 71.961 -13.635 0.928 1.874 H5 C7Z 47
C7Z H6 H6 H 0 1 N N N N N N 217.802 -93.628 69.677 -13.241 1.858 -1.000 H6 C7Z 48
C7Z H7 H7 H 0 1 N N N N N N 216.503 -92.639 71.361 -15.151 2.674 0.194 H7 C7Z 49
C7Z H8 H8 H 0 1 N N N N N N 216.388 -95.004 71.197 -14.175 -0.816 0.141 H8 C7Z 50
C7Z H9 H9 H 0 1 N N N N N N 217.751 -95.089 72.363 -14.441 -0.317 -1.548 H9 C7Z 51
C7Z H10 H10 H 0 1 N N N N N N 222.056 -93.907 71.095 -9.977 1.683 1.672 H10 C7Z 52
C7Z H11 H11 H 0 1 N N N N N N 222.046 -95.557 71.804 -11.152 1.307 2.955 H11 C7Z 53
C7Z H12 H12 H 0 1 N N N N N N 222.201 -95.344 70.027 -10.120 0.019 2.288 H12 C7Z 54
C7Z H13 H13 H 0 1 N N N N N N 216.472 -96.224 69.084 -10.930 -0.272 -2.585 H13 C7Z 55
C7Z H14 H14 H 0 1 N N N N N N 217.915 -95.277 68.590 -12.624 -0.233 -3.128 H14 C7Z 56
C7Z H15 H15 H 0 1 N N N N N N 217.973 -97.072 68.580 -11.958 1.126 -2.190 H15 C7Z 57
C7Z H16 H16 H 0 1 N N N N N N 239.329 -112.870 69.014 15.146 -2.691 0.093 H16 C7Z 58
C7Z H18 H18 H 0 1 N N N N N N 220.039 -98.146 71.261 -10.096 -1.967 0.165 H18 C7Z 59
C7Z H19 H19 H 0 1 N N N N N N 221.332 -97.207 68.704 -9.090 0.936 0.083 H19 C7Z 60
C7Z H20 H20 H 0 1 N N N N N N 219.878 -99.933 70.620 -7.653 -2.661 -0.854 H20 C7Z 61
C7Z H21 H21 H 0 1 N N N N N N 220.664 -101.121 69.526 -6.772 -2.572 0.690 H21 C7Z 62
C7Z H22 H22 H 0 1 N N N N N N 221.414 -100.725 71.110 -8.548 -2.678 0.684 H22 C7Z 63
C7Z H23 H23 H 0 1 N N N N N N 223.308 -98.569 68.654 -6.694 1.059 0.091 H23 C7Z 64
C7Z H24 H24 H 0 1 N N N N N N 223.074 -101.615 69.118 -5.312 -1.723 0.163 H24 C7Z 65
C7Z H25 H25 H 0 1 N N N N N N 225.416 -99.687 68.860 -4.291 1.191 0.099 H25 C7Z 66
C7Z H26 H26 H 0 1 N N N N N N 223.975 -103.030 69.470 -2.859 -2.403 -0.838 H26 C7Z 67
C7Z H27 H27 H 0 1 N N N N N N 225.066 -103.859 68.308 -1.977 -2.314 0.706 H27 C7Z 68
C7Z H28 H28 H 0 1 N N N N N N 225.561 -103.666 70.024 -3.754 -2.420 0.700 H28 C7Z 69
C7Z H29 H29 H 0 1 N N N N N N 227.353 -100.862 68.258 -1.889 1.324 0.107 H29 C7Z 70
C7Z H30 H30 H 0 1 N N N N N N 227.459 -103.964 68.498 -0.509 -1.457 0.179 H30 C7Z 71
C7Z H31 H31 H 0 1 N N N N N N 229.545 -101.842 67.882 0.513 1.458 0.115 H31 C7Z 72
C7Z H32 H32 H 0 1 N N N N N N 229.466 -104.925 67.589 1.893 -1.324 0.187 H32 C7Z 73
C7Z H33 H33 H 0 1 N N N N N N 231.308 -101.993 68.593 2.863 2.404 1.132 H33 C7Z 74
C7Z H34 H34 H 0 1 N N N N N N 232.505 -103.010 69.464 3.759 2.421 -0.406 H34 C7Z 75
C7Z H35 H35 H 0 1 N N N N N N 232.777 -102.581 67.741 1.982 2.315 -0.412 H35 C7Z 76
C7Z H36 H36 H 0 1 N N N N N N 231.607 -106.117 67.259 4.295 -1.190 0.195 H36 C7Z 77
C7Z H37 H37 H 0 1 N N N N N N 233.547 -104.641 69.091 5.316 1.724 0.131 H37 C7Z 78
C7Z H38 H38 H 0 1 N N N N N N 233.502 -107.580 68.099 6.698 -1.059 0.203 H38 C7Z 79
C7Z H39 H39 H 0 1 N N N N N N 235.303 -104.569 68.893 7.657 2.661 1.148 H39 C7Z 80
C7Z H40 H40 H 0 1 N N N N N N 236.568 -105.499 69.767 8.552 2.678 -0.390 H40 C7Z 81
C7Z H41 H41 H 0 1 N N N N N N 236.760 -105.146 68.016 6.776 2.572 -0.396 H41 C7Z 82
C7Z H42 H42 H 0 1 N N N N N N 235.554 -108.833 68.231 9.094 -0.936 0.211 H42 C7Z 83
C7Z H43 H43 H 0 1 N N N N N N 237.985 -107.039 68.338 10.102 1.968 0.222 H43 C7Z 84
C7Z H44 H44 H 0 1 N N N N N N 236.519 -109.838 65.901 10.865 0.293 -2.550 H44 C7Z 85
C7Z H45 H45 H 0 1 N N N N N N 237.127 -108.153 65.764 12.545 0.249 -3.136 H45 C7Z 86
C7Z H46 H46 H 0 1 N N N N N N 237.709 -109.413 64.624 11.896 -1.112 -2.191 H46 C7Z 87
C7Z H47 H47 H 0 1 N N N N N N 240.563 -108.866 66.892 12.678 2.644 -0.299 H47 C7Z 88
C7Z H48 H48 H 0 1 N N N N N N 240.000 -108.864 65.186 12.958 2.442 -2.045 H48 C7Z 89
C7Z H49 H49 H 0 1 N N N N N N 239.417 -107.603 66.326 11.296 2.484 -1.409 H49 C7Z 90
C7Z H50 H50 H 0 1 N N N N N N 238.522 -111.327 65.423 14.400 0.316 -1.603 H50 C7Z 91
C7Z H51 H51 H 0 1 N N N N N N 240.048 -111.038 66.326 14.181 0.808 0.097 H51 C7Z 92
C7Z H52 H52 H 0 1 N N N N N N 238.224 -112.951 66.950 13.210 -1.857 -1.035 H52 C7Z 93
C7Z H53 H53 H 0 1 N N N N N N 236.479 -111.285 67.535 12.859 -2.426 1.291 H53 C7Z 94
C7Z H54 H54 H 0 1 N N N N N N 237.011 -112.194 68.990 13.678 -0.945 1.835 H54 C7Z 95
C7Z H56 H56 H 0 1 N N N N N N 237.288 -111.069 70.745 10.016 -1.679 1.728 H56 C7Z 96
C7Z H57 H57 H 0 1 N N N N N N 238.717 -109.981 70.739 11.227 -1.310 2.980 H57 C7Z 97
C7Z H58 H58 H 0 1 N N N N N N 237.062 -109.291 70.637 10.183 -0.017 2.343 H58 C7Z 98
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
C7Z C36 C21 SING N N 1
C7Z C37 C21 SING N N 2
C7Z C22 C21 SING N N 3
C7Z C22 C23 SING N N 4
C7Z C21 C26 SING N N 5
C7Z C23 C24 SING N N 6
C7Z C23 O23 SING N N 7
C7Z C32 C33 SING N N 8
C7Z C32 C31 DOUB N E 9
C7Z C34 C35 SING N N 10
C7Z C34 C33 DOUB N E 11
C7Z C35 C15 DOUB N E 12
C7Z C33 C40 SING N N 13
C7Z C26 C27 SING N N 14
C7Z C26 C25 DOUB N N 15
C7Z C24 C25 SING N N 16
C7Z C27 C28 DOUB N E 17
C7Z C28 C29 SING N N 18
C7Z C30 C29 DOUB N E 19
C7Z C30 C31 SING N N 20
C7Z C15 C14 SING N N 21
C7Z C29 C39 SING N N 22
C7Z C14 C13 DOUB N E 23
C7Z C25 C38 SING N N 24
C7Z C13 C12 SING N N 25
C7Z C13 C20 SING N N 26
C7Z C12 C11 DOUB N E 27
C7Z C11 C10 SING N N 28
C7Z C10 C9 DOUB N E 29
C7Z C16 C1 SING N N 30
C7Z C8 C9 SING N N 31
C7Z C8 C7 DOUB N E 32
C7Z C9 C19 SING N N 33
C7Z C7 C6 SING N N 34
C7Z C1 C6 SING N N 35
C7Z C1 C17 SING N N 36
C7Z C1 C2 SING N N 37
C7Z C6 C5 DOUB N N 38
C7Z C3 C4 SING N N 39
C7Z C3 C2 SING N N 40
C7Z C3 O3 SING N N 41
C7Z C5 C18 SING N N 42
C7Z C5 C4 SING N N 43
C7Z C17 H1 SING N N 44
C7Z C17 H2 SING N N 45
C7Z C17 H3 SING N N 46
C7Z C4 H4 SING N N 47
C7Z C4 H5 SING N N 48
C7Z C3 H6 SING N N 49
C7Z O3 H7 SING N N 50
C7Z C2 H8 SING N N 51
C7Z C2 H9 SING N N 52
C7Z C18 H10 SING N N 53
C7Z C18 H11 SING N N 54
C7Z C18 H12 SING N N 55
C7Z C16 H13 SING N N 56
C7Z C16 H14 SING N N 57
C7Z C16 H15 SING N N 58
C7Z O23 H16 SING N N 59
C7Z C7 H18 SING N N 60
C7Z C8 H19 SING N N 61
C7Z C19 H20 SING N N 62
C7Z C19 H21 SING N N 63
C7Z C19 H22 SING N N 64
C7Z C10 H23 SING N N 65
C7Z C11 H24 SING N N 66
C7Z C12 H25 SING N N 67
C7Z C20 H26 SING N N 68
C7Z C20 H27 SING N N 69
C7Z C20 H28 SING N N 70
C7Z C14 H29 SING N N 71
C7Z C15 H30 SING N N 72
C7Z C35 H31 SING N N 73
C7Z C34 H32 SING N N 74
C7Z C40 H33 SING N N 75
C7Z C40 H34 SING N N 76
C7Z C40 H35 SING N N 77
C7Z C32 H36 SING N N 78
C7Z C31 H37 SING N N 79
C7Z C30 H38 SING N N 80
C7Z C39 H39 SING N N 81
C7Z C39 H40 SING N N 82
C7Z C39 H41 SING N N 83
C7Z C28 H42 SING N N 84
C7Z C27 H43 SING N N 85
C7Z C36 H44 SING N N 86
C7Z C36 H45 SING N N 87
C7Z C36 H46 SING N N 88
C7Z C37 H47 SING N N 89
C7Z C37 H48 SING N N 90
C7Z C37 H49 SING N N 91
C7Z C22 H50 SING N N 92
C7Z C22 H51 SING N N 93
C7Z C23 H52 SING N N 94
C7Z C24 H53 SING N N 95
C7Z C24 H54 SING N N 96
C7Z C38 H56 SING N N 97
C7Z C38 H57 SING N N 98
C7Z C38 H58 SING N N 99
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
C7Z InChI InChI 1.03 InChI=1S/C40H56O2/c1-29(17-13-19-31(3)21-23-37-33(5)25-35(41)27-39(37,7)8)15-11-12-16-30(2)18-14-20-32(4)22-24-38-34(6)26-36(42)28-40(38,9)10/h11-24,35-36,41-42H,25-28H2,1-10H3/b12-11+,17-13+,18-14+,23-21+,24-22+,29-15+,30-16+,31-19+,32-20+/t35-,36-/m0/s1
C7Z InChIKey InChI 1.03 JKQXZKUSFCKOGQ-ANDPMPNWSA-N
C7Z SMILES_CANONICAL CACTVS 3.385 CC(=C/C=C/C=C(C)/C=C/C=C(C)/C=C/C1=C(C)C[C@H](O)CC1(C)C)\C=C\C=C(C)\C=C\C2=C(C)C[C@H](O)CC2(C)C
C7Z SMILES CACTVS 3.385 CC(=CC=CC=C(C)C=CC=C(C)C=CC1=C(C)C[CH](O)CC1(C)C)C=CC=C(C)C=CC2=C(C)C[CH](O)CC2(C)C
C7Z SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 CC1=C(C(C[C@H](C1)O)(C)C)/C=C/C(=C/C=C/C(=C/C=C/C=C(/C=C/C=C(/C=C/C2=C(C[C@@H](CC2(C)C)O)C)\C)\C)/C)/C
C7Z SMILES "OpenEye OEToolkits" 2.0.6 CC1=C(C(CC(C1)O)(C)C)C=CC(=CC=CC(=CC=CC=C(C)C=CC=C(C)C=CC2=C(CC(CC2(C)C)O)C)C)C
#
_pdbx_chem_comp_identifier.comp_id C7Z
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.6
_pdbx_chem_comp_identifier.identifier
(1~{S})-3,5,5-trimethyl-4-[(1~{E},3~{E},5~{E},7~{E},9~{E},11~{E},13~{E},15~{E},17~{E})-3,7,12,16-tetramethyl-18-[(4~{S})-2,6,6-trimethyl-4-oxidanyl-cyclohexen-1-yl]octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohex-3-en-1-ol
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
C7Z 'Create component' 2017-11-17 EBI
C7Z 'Initial release' 2018-02-21 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
C7Z C6 C 5.799 -10.875 1
C7Z C17 C 3.750 -10.326 2
C7Z C4 C 7.098 -13.125 3
C7Z C3 C 5.799 -13.875 4
C7Z O3 O 5.799 -15.375 5
C7Z C2 C 4.500 -13.125 6
C7Z C1 C 4.500 -11.625 7
C7Z C5 C 7.098 -11.625 8
C7Z C18 C 8.397 -10.875 9
C7Z C16 C 3.000 -11.625 10
C7Z O23 O 17.490 15.375 11
C7Z C26 C 17.490 10.875 12
C7Z C7 C 5.799 -9.375 13
C7Z C8 C 7.098 -8.625 14
C7Z C9 C 7.098 -7.125 15
C7Z C19 C 5.799 -6.375 16
C7Z C10 C 8.397 -6.375 17
C7Z C11 C 8.397 -4.875 18
C7Z C12 C 9.696 -4.125 19
C7Z C13 C 9.696 -2.625 20
C7Z C20 C 8.397 -1.875 21
C7Z C14 C 10.995 -1.875 22
C7Z C15 C 10.995 -0.375 23
C7Z C35 C 12.294 0.375 24
C7Z C34 C 12.294 1.875 25
C7Z C33 C 13.593 2.625 26
C7Z C40 C 14.892 1.875 27
C7Z C32 C 13.593 4.125 28
C7Z C31 C 14.892 4.875 29
C7Z C30 C 14.892 6.375 30
C7Z C29 C 16.191 7.125 31
C7Z C39 C 17.490 6.375 32
C7Z C28 C 16.191 8.625 33
C7Z C27 C 17.490 9.375 34
C7Z C21 C 16.191 11.625 35
C7Z C36 C 14.691 11.625 36
C7Z C37 C 15.441 10.326 37
C7Z C22 C 16.191 13.125 38
C7Z C23 C 17.490 13.875 39
C7Z C24 C 18.790 13.125 40
C7Z C25 C 18.790 11.625 41
C7Z C38 C 20.088 10.875 42
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
C7Z C36 C21 SINGLE NONE 1
C7Z C37 C21 SINGLE NONE 2
C7Z C22 C21 SINGLE NONE 3
C7Z C22 C23 SINGLE NONE 4
C7Z C21 C26 SINGLE NONE 5
C7Z C23 C24 SINGLE NONE 6
C7Z C23 O23 SINGLE BEGINWEDGE 7
C7Z C32 C33 SINGLE ENDUPRIGHT 8
C7Z C32 C31 DOUBLE NONE 9
C7Z C34 C35 SINGLE ENDUPRIGHT 10
C7Z C34 C33 DOUBLE NONE 11
C7Z C35 C15 DOUBLE NONE 12
C7Z C33 C40 SINGLE ENDUPRIGHT 13
C7Z C26 C27 SINGLE ENDUPRIGHT 14
C7Z C26 C25 DOUBLE NONE 15
C7Z C24 C25 SINGLE NONE 16
C7Z C27 C28 DOUBLE NONE 17
C7Z C28 C29 SINGLE ENDUPRIGHT 18
C7Z C30 C29 DOUBLE NONE 19
C7Z C30 C31 SINGLE ENDUPRIGHT 20
C7Z C15 C14 SINGLE ENDUPRIGHT 21
C7Z C29 C39 SINGLE ENDUPRIGHT 22
C7Z C14 C13 DOUBLE NONE 23
C7Z C25 C38 SINGLE NONE 24
C7Z C13 C12 SINGLE ENDUPRIGHT 25
C7Z C13 C20 SINGLE ENDDOWNRIGHT 26
C7Z C12 C11 DOUBLE NONE 27
C7Z C11 C10 SINGLE ENDUPRIGHT 28
C7Z C10 C9 DOUBLE NONE 29
C7Z C16 C1 SINGLE NONE 30
C7Z C8 C9 SINGLE ENDDOWNRIGHT 31
C7Z C8 C7 DOUBLE NONE 32
C7Z C9 C19 SINGLE ENDDOWNRIGHT 33
C7Z C7 C6 SINGLE ENDUPRIGHT 34
C7Z C1 C6 SINGLE NONE 35
C7Z C1 C17 SINGLE NONE 36
C7Z C1 C2 SINGLE NONE 37
C7Z C6 C5 DOUBLE NONE 38
C7Z C3 C4 SINGLE NONE 39
C7Z C3 C2 SINGLE NONE 40
C7Z C3 O3 SINGLE BEGINDASH 41
C7Z C5 C18 SINGLE NONE 42
C7Z C5 C4 SINGLE NONE 43
#
_pdbe_chem_comp_substructure.comp_id C7Z
_pdbe_chem_comp_substructure.substructure_name MurckoScaffold
_pdbe_chem_comp_substructure.id S1
_pdbe_chem_comp_substructure.substructure_type scaffold
_pdbe_chem_comp_substructure.substructure_smiles C1=C(/C=C/C=C/C=C/C=C/C=C/C=C/C=C/C=C/C=C/C2=CCCCC2)CCCC1
_pdbe_chem_comp_substructure.substructure_inchis
InChI=1S/C30H36/c1(3-5-7-9-11-13-17-23-29-25-19-15-20-26-29)2-4-6-8-10-12-14-18-24-30-27-21-16-22-28-30/h1-14,17-18,23-25,27H,15-16,19-22,26,28H2/b2-1+,5-3+,6-4+,9-7+,10-8+,13-11+,14-12+,23-17+,24-18+
_pdbe_chem_comp_substructure.substructure_inchikeys RZDCQLYXQKSTLW-HSDZVWSGSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
C7Z C6 S1 1
C7Z C4 S1 1
C7Z C3 S1 1
C7Z C2 S1 1
C7Z C1 S1 1
C7Z C5 S1 1
C7Z C26 S1 1
C7Z C7 S1 1
C7Z C8 S1 1
C7Z C9 S1 1
C7Z C10 S1 1
C7Z C11 S1 1
C7Z C12 S1 1
C7Z C13 S1 1
C7Z C14 S1 1
C7Z C15 S1 1
C7Z C35 S1 1
C7Z C34 S1 1
C7Z C33 S1 1
C7Z C32 S1 1
C7Z C31 S1 1
C7Z C30 S1 1
C7Z C29 S1 1
C7Z C28 S1 1
C7Z C27 S1 1
C7Z C21 S1 1
C7Z C22 S1 1
C7Z C23 S1 1
C7Z C24 S1 1
C7Z C25 S1 1
#
_pdbe_chem_comp_rdkit_properties.comp_id C7Z
_pdbe_chem_comp_rdkit_properties.exactmw 568.428
_pdbe_chem_comp_rdkit_properties.amw 568.886
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 2
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 22
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 2
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 42
_pdbe_chem_comp_rdkit_properties.NumAtoms 98
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 2
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.450
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 335.815
_pdbe_chem_comp_rdkit_properties.tpsa 40.460
_pdbe_chem_comp_rdkit_properties.CrippenClogP 10.547
_pdbe_chem_comp_rdkit_properties.CrippenMR 184.172
_pdbe_chem_comp_rdkit_properties.chi0v 20.816
_pdbe_chem_comp_rdkit_properties.chi1v 10.658
_pdbe_chem_comp_rdkit_properties.chi2v 4.142
_pdbe_chem_comp_rdkit_properties.chi3v 4.142
_pdbe_chem_comp_rdkit_properties.chi4v 2.443
_pdbe_chem_comp_rdkit_properties.chi0n 76.816
_pdbe_chem_comp_rdkit_properties.chi1n 38.475
_pdbe_chem_comp_rdkit_properties.chi2n 4.142
_pdbe_chem_comp_rdkit_properties.chi3n 4.142
_pdbe_chem_comp_rdkit_properties.chi4n 2.443
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.940
_pdbe_chem_comp_rdkit_properties.kappa1 6.132
_pdbe_chem_comp_rdkit_properties.kappa2 16.055
_pdbe_chem_comp_rdkit_properties.kappa3 11.743
_pdbe_chem_comp_rdkit_properties.Phi 2.344
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
C7Z UniChem ChEBI 176102
C7Z UniChem ZINC ZINC000086007157
C7Z UniChem fdasrs KRI00MMQ7Y
C7Z UniChem SureChEMBL SCHEMBL10452932
C7Z UniChem NMRShiftDB 60052309
C7Z UniChem LipidMaps LMPR01070645
C7Z UniChem Nikkaji J2.701.286H
C7Z UniChem HMDB HMDB0040162
C7Z UniChem 'PubChem TPHARMA' 87238349
C7Z UniChem PubChem 21772452
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
C7Z C6 11.311 1.222 0.624 ETKDGv3 1
C7Z C17 10.593 1.424 -1.770 ETKDGv3 2
C7Z C4 13.557 0.096 0.452 ETKDGv3 3
C7Z C3 13.575 0.499 -1.024 ETKDGv3 4
C7Z O3 14.879 0.425 -1.544 ETKDGv3 5
C7Z C2 13.008 1.914 -1.172 ETKDGv3 6
C7Z C1 11.534 1.997 -0.685 ETKDGv3 7
C7Z C5 12.211 0.318 1.105 ETKDGv3 8
C7Z C18 11.969 -0.401 2.412 ETKDGv3 9
C7Z C16 11.193 3.492 -0.484 ETKDGv3 10
C7Z O23 -12.956 -0.134 1.765 ETKDGv3 11
C7Z C26 -11.385 -0.447 -1.114 ETKDGv3 12
C7Z C7 10.013 1.411 1.317 ETKDGv3 13
C7Z C8 9.056 0.477 1.261 ETKDGv3 14
C7Z C9 7.724 0.642 1.894 ETKDGv3 15
C7Z C19 7.555 1.540 3.098 ETKDGv3 16
C7Z C10 6.683 -0.023 1.357 ETKDGv3 17
C7Z C11 5.287 0.099 1.831 ETKDGv3 18
C7Z C12 4.315 -0.644 1.289 ETKDGv3 19
C7Z C13 2.892 -0.547 1.703 ETKDGv3 20
C7Z C20 2.529 -0.104 3.102 ETKDGv3 21
C7Z C14 1.947 -0.858 0.795 ETKDGv3 22
C7Z C15 0.492 -0.740 1.036 ETKDGv3 23
C7Z C35 -0.388 -1.135 0.113 ETKDGv3 24
C7Z C34 -1.843 -0.995 0.344 ETKDGv3 25
C7Z C33 -2.790 -1.435 -0.507 ETKDGv3 26
C7Z C40 -2.433 -2.186 -1.769 ETKDGv3 27
C7Z C32 -4.210 -1.151 -0.175 ETKDGv3 28
C7Z C31 -5.167 -1.024 -1.102 ETKDGv3 29
C7Z C30 -6.563 -0.736 -0.708 ETKDGv3 30
C7Z C29 -7.565 -0.515 -1.582 ETKDGv3 31
C7Z C39 -7.323 -0.477 -3.073 ETKDGv3 32
C7Z C28 -8.931 -0.315 -1.037 ETKDGv3 33
C7Z C27 -10.041 -0.616 -1.721 ETKDGv3 34
C7Z C21 -12.125 -1.721 -0.670 ETKDGv3 35
C7Z C36 -11.311 -2.406 0.454 ETKDGv3 36
C7Z C37 -12.226 -2.704 -1.859 ETKDGv3 37
C7Z C22 -13.575 -1.435 -0.171 ETKDGv3 38
C7Z C23 -13.709 -0.111 0.581 ETKDGv3 39
C7Z C24 -13.258 1.031 -0.329 ETKDGv3 40
C7Z C25 -11.885 0.804 -0.917 ETKDGv3 41
C7Z C38 -11.148 2.027 -1.411 ETKDGv3 42
C7Z H1 10.767 1.921 -2.748 ETKDGv3 43
C7Z H2 9.529 1.583 -1.493 ETKDGv3 44
C7Z H3 10.745 0.332 -1.897 ETKDGv3 45
C7Z H4 14.315 0.682 1.016 ETKDGv3 46
C7Z H5 13.834 -0.978 0.524 ETKDGv3 47
C7Z H6 12.947 -0.215 -1.597 ETKDGv3 48
C7Z H7 15.444 1.073 -1.048 ETKDGv3 49
C7Z H8 13.087 2.234 -2.234 ETKDGv3 50
C7Z H9 13.642 2.610 -0.576 ETKDGv3 51
C7Z H10 12.863 -0.981 2.725 ETKDGv3 52
C7Z H11 11.741 0.330 3.216 ETKDGv3 53
C7Z H12 11.123 -1.112 2.305 ETKDGv3 54
C7Z H13 11.433 4.074 -1.400 ETKDGv3 55
C7Z H14 11.777 3.914 0.362 ETKDGv3 56
C7Z H15 10.112 3.638 -0.271 ETKDGv3 57
C7Z H16 -13.280 0.617 2.327 ETKDGv3 58
C7Z H18 9.829 2.362 1.799 ETKDGv3 59
C7Z H19 9.242 -0.419 0.678 ETKDGv3 60
C7Z H20 6.932 1.045 3.871 ETKDGv3 61
C7Z H21 7.082 2.496 2.790 ETKDGv3 62
C7Z H22 8.529 1.756 3.584 ETKDGv3 63
C7Z H23 6.864 -0.672 0.506 ETKDGv3 64
C7Z H24 5.041 0.827 2.591 ETKDGv3 65
C7Z H25 4.564 -1.315 0.474 ETKDGv3 66
C7Z H26 2.177 0.949 3.084 ETKDGv3 67
C7Z H27 1.739 -0.757 3.527 ETKDGv3 68
C7Z H28 3.394 -0.187 3.792 ETKDGv3 69
C7Z H29 2.262 -1.192 -0.189 ETKDGv3 70
C7Z H30 0.126 -0.315 1.962 ETKDGv3 71
C7Z H31 -0.022 -1.546 -0.820 ETKDGv3 72
C7Z H32 -2.155 -0.480 1.247 ETKDGv3 73
C7Z H33 -1.664 -2.959 -1.560 ETKDGv3 74
C7Z H34 -2.054 -1.477 -2.535 ETKDGv3 75
C7Z H35 -3.308 -2.732 -2.178 ETKDGv3 76
C7Z H36 -4.467 -0.990 0.866 ETKDGv3 77
C7Z H37 -4.914 -1.122 -2.148 ETKDGv3 78
C7Z H38 -6.790 -0.734 0.353 ETKDGv3 79
C7Z H39 -7.176 -1.508 -3.457 ETKDGv3 80
C7Z H40 -8.170 -0.006 -3.611 ETKDGv3 81
C7Z H41 -6.431 0.141 -3.308 ETKDGv3 82
C7Z H42 -9.032 0.037 -0.016 ETKDGv3 83
C7Z H43 -9.980 -1.068 -2.702 ETKDGv3 84
C7Z H44 -11.849 -3.295 0.849 ETKDGv3 85
C7Z H45 -11.114 -1.709 1.293 ETKDGv3 86
C7Z H46 -10.326 -2.753 0.075 ETKDGv3 87
C7Z H47 -12.829 -3.595 -1.578 ETKDGv3 88
C7Z H48 -12.711 -2.213 -2.730 ETKDGv3 89
C7Z H49 -11.225 -3.066 -2.176 ETKDGv3 90
C7Z H50 -13.942 -2.263 0.475 ETKDGv3 91
C7Z H51 -14.272 -1.391 -1.039 ETKDGv3 92
C7Z H52 -14.786 0.036 0.832 ETKDGv3 93
C7Z H53 -13.982 1.143 -1.165 ETKDGv3 94
C7Z H54 -13.272 1.978 0.254 ETKDGv3 95
C7Z H56 -10.217 2.173 -0.825 ETKDGv3 96
C7Z H57 -10.897 1.915 -2.487 ETKDGv3 97
C7Z H58 -11.765 2.943 -1.302 ETKDGv3 98
#