data_C6H
#
_chem_comp.id C6H
_chem_comp.name 1-(7-chloranyl-4-methoxy-1~{H}-indol-5-yl)-3-[1-(cyclohexylmethyl)piperidin-4-yl]propan-1-one
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C24 H33 Cl N2 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms MR28926
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2017-11-15
_chem_comp.pdbx_modified_date 2020-06-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 416.984
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code C6H
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 6EZH
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
C6H C01 C1 C 0 1 N N N N N N -8.339 1.247 55.123 4.201 -2.684 2.040 C01 C6H 1
C6H O02 O1 O 0 1 N N N N N N -8.967 0.805 54.002 4.495 -2.349 0.683 O02 C6H 2
C6H C03 C2 C 0 1 Y N N N N N -9.074 1.764 52.996 4.429 -1.038 0.345 C03 C6H 3
C6H C04 C3 C 0 1 Y N N N N N -8.242 1.730 51.859 3.226 -0.483 -0.111 C04 C6H 4
C6H C05 C4 C 0 1 N N N N N N -7.135 0.608 51.622 2.030 -1.321 -0.231 C05 C6H 5
C6H O06 O2 O 0 1 N N N N N N -6.106 0.810 50.981 2.081 -2.496 0.064 O06 C6H 6
C6H C07 C5 C 0 1 N N N N N N -7.348 -0.797 52.187 0.737 -0.722 -0.722 C07 C6H 7
C6H C08 C6 C 0 1 N N N N N N -6.225 -1.731 51.677 -0.345 -1.803 -0.754 C08 C6H 8
C6H C09 C7 C 0 1 N N N N N N -5.168 -1.943 52.904 -1.658 -1.196 -1.252 C09 C6H 9
C6H C10 C8 C 0 1 N N N N N N -5.925 -2.374 54.062 -2.708 -2.300 -1.403 C10 C6H 10
C6H C11 C9 C 0 1 N N N N N N -5.196 -3.206 55.100 -4.036 -1.679 -1.843 C11 C6H 11
C6H N12 N1 N 0 1 N N N N N N -4.023 -3.946 54.647 -4.473 -0.696 -0.843 N12 C6H 12
C6H C13 C10 C 0 1 N N N N N N -3.011 -3.451 55.115 -5.810 -0.180 -1.162 C13 C6H 13
C6H C14 C11 C 0 1 N N N N N N -1.625 -4.037 54.777 -6.334 0.642 0.017 C14 C6H 14
C6H C15 C12 C 0 1 N N N N N N -0.644 -3.527 55.824 -7.672 1.283 -0.362 C15 C6H 15
C6H C16 C13 C 0 1 N N N N N N 0.795 -3.902 55.477 -8.196 2.104 0.818 C16 C6H 16
C6H C17 C14 C 0 1 N N N N N N 0.944 -5.400 55.208 -8.393 1.190 2.029 C17 C6H 17
C6H C18 C15 C 0 1 N N N N N N -0.119 -5.948 54.253 -7.056 0.550 2.408 C18 C6H 18
C6H C19 C16 C 0 1 N N N N N N -1.509 -5.576 54.749 -6.532 -0.272 1.228 C19 C6H 19
C6H C20 C17 C 0 1 N N N N N N -4.035 -4.116 53.214 -3.503 0.399 -0.715 C20 C6H 20
C6H C21 C18 C 0 1 N N N N N N -4.115 -2.838 52.433 -2.159 -0.161 -0.241 C21 C6H 21
C6H C22 C19 C 0 1 Y N N N N N -8.426 2.726 50.892 3.168 0.881 -0.453 C22 C6H 22
C6H C23 C20 C 0 1 Y N N N N N -9.413 3.753 50.994 4.271 1.671 -0.346 C23 C6H 23
C6H CL CL1 CL 0 0 N N N N N N -9.577 4.960 49.726 4.174 3.350 -0.774 CL C6H 24
C6H C25 C21 C 0 1 Y N N N N N -10.230 3.780 52.155 5.482 1.139 0.107 C25 C6H 25
C6H N26 N2 N 0 1 Y N N N N N -11.224 4.634 52.535 6.727 1.681 0.313 N26 C6H 26
C6H C27 C22 C 0 1 Y N N N N N -11.714 4.276 53.711 7.585 0.720 0.774 C27 C6H 27
C6H C28 C23 C 0 1 Y N N N N N -11.040 3.113 54.182 6.942 -0.453 0.882 C28 C6H 28
C6H C29 C24 C 0 1 Y N N N N N -10.064 2.801 53.137 5.560 -0.222 0.454 C29 C6H 29
C6H H1 H1 H 0 1 N N N N N N -8.296 0.435 55.864 4.290 -3.762 2.175 H1 C6H 30
C6H H2 H2 H 0 1 N N N N N N -7.317 1.566 54.869 4.904 -2.176 2.700 H2 C6H 31
C6H H3 H3 H 0 1 N N N N N N -8.895 2.098 55.543 3.185 -2.371 2.280 H3 C6H 32
C6H H4 H4 H 0 1 N N N N N N -7.323 -0.758 53.286 0.430 0.080 -0.051 H4 C6H 33
C6H H5 H5 H 0 1 N N N N N N -8.324 -1.182 51.856 0.880 -0.322 -1.726 H5 C6H 34
C6H H6 H6 H 0 1 N N N N N N -6.650 -2.700 51.376 -0.038 -2.605 -1.425 H6 C6H 35
C6H H7 H7 H 0 1 N N N N N N -5.715 -1.271 50.817 -0.488 -2.204 0.250 H7 C6H 36
C6H H8 H8 H 0 1 N N N N N N -4.726 -0.958 53.114 -1.494 -0.715 -2.217 H8 C6H 37
C6H H9 H9 H 0 1 N N N N N N -6.300 -1.471 54.566 -2.376 -3.018 -2.153 H9 C6H 38
C6H H10 H10 H 0 1 N N N N N N -6.775 -2.970 53.698 -2.843 -2.807 -0.448 H10 C6H 39
C6H H11 H11 H 0 1 N N N N N N -4.871 -2.527 55.902 -3.904 -1.183 -2.805 H11 C6H 40
C6H H12 H12 H 0 1 N N N N N N -5.913 -3.935 55.505 -4.789 -2.461 -1.937 H12 C6H 41
C6H H14 H14 H 0 1 N N N N N N -2.996 -2.400 54.792 -5.754 0.452 -2.049 H14 C6H 42
C6H H15 H15 H 0 1 N N N N N N -3.114 -3.497 56.209 -6.486 -1.014 -1.352 H15 C6H 43
C6H H16 H16 H 0 1 N N N N N N -1.318 -3.651 53.794 -5.615 1.423 0.264 H16 C6H 44
C6H H17 H17 H 0 1 N N N N N N -0.723 -2.431 55.883 -7.531 1.934 -1.224 H17 C6H 45
C6H H18 H18 H 0 1 N N N N N N -0.902 -3.966 56.799 -8.391 0.502 -0.609 H18 C6H 46
C6H H19 H19 H 0 1 N N N N N N 1.448 -3.625 56.318 -7.476 2.885 1.065 H19 C6H 47
C6H H20 H20 H 0 1 N N N N N N 1.100 -3.347 54.578 -9.148 2.561 0.548 H20 C6H 48
C6H H21 H21 H 0 1 N N N N N N 0.865 -5.937 56.165 -8.766 1.776 2.869 H21 C6H 49
C6H H22 H22 H 0 1 N N N N N N 1.936 -5.579 54.768 -9.112 0.410 1.781 H22 C6H 50
C6H H23 H23 H 0 1 N N N N N N -0.032 -7.043 54.202 -6.336 1.331 2.655 H23 C6H 51
C6H H24 H24 H 0 1 N N N N N N 0.036 -5.520 53.251 -7.196 -0.101 3.270 H24 C6H 52
C6H H25 H25 H 0 1 N N N N N N -2.268 -5.993 54.071 -7.251 -1.052 0.981 H25 C6H 53
C6H H26 H26 H 0 1 N N N N N N -1.661 -5.978 55.762 -5.579 -0.728 1.498 H26 C6H 54
C6H H27 H27 H 0 1 N N N N N N -4.905 -4.735 52.949 -3.373 0.884 -1.682 H27 C6H 55
C6H H28 H28 H 0 1 N N N N N N -3.112 -4.638 52.923 -3.869 1.126 0.010 H28 C6H 56
C6H H29 H29 H 0 1 N N N N N N -4.310 -3.084 51.379 -2.285 -0.634 0.732 H29 C6H 57
C6H H30 H30 H 0 1 N N N N N N -3.150 -2.317 52.515 -1.435 0.650 -0.162 H30 C6H 58
C6H H31 H31 H 0 1 N N N N N N -7.787 2.717 50.022 2.239 1.305 -0.805 H31 C6H 59
C6H H32 H32 H 0 1 N N N N N N -11.538 5.419 52.001 6.963 2.608 0.154 H32 C6H 60
C6H H33 H33 H 0 1 N N N N N N -12.507 4.789 54.235 8.626 0.881 1.015 H33 C6H 61
C6H H34 H34 H 0 1 N N N N N N -11.211 2.580 55.105 7.363 -1.389 1.219 H34 C6H 62
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
C6H CL C23 SING N N 1
C6H C22 C23 DOUB Y N 2
C6H C22 C04 SING Y N 3
C6H O06 C05 DOUB N N 4
C6H C23 C25 SING Y N 5
C6H C05 C04 SING N N 6
C6H C05 C07 SING N N 7
C6H C08 C07 SING N N 8
C6H C08 C09 SING N N 9
C6H C04 C03 DOUB Y N 10
C6H C25 N26 SING Y N 11
C6H C25 C29 DOUB Y N 12
C6H C21 C09 SING N N 13
C6H C21 C20 SING N N 14
C6H N26 C27 SING Y N 15
C6H C09 C10 SING N N 16
C6H C03 C29 SING Y N 17
C6H C03 O02 SING N N 18
C6H C29 C28 SING Y N 19
C6H C20 N12 SING N N 20
C6H C27 C28 DOUB Y N 21
C6H O02 C01 SING N N 22
C6H C10 C11 SING N N 23
C6H C18 C19 SING N N 24
C6H C18 C17 SING N N 25
C6H N12 C11 SING N N 26
C6H N12 C13 SING N N 27
C6H C19 C14 SING N N 28
C6H C14 C13 SING N N 29
C6H C14 C15 SING N N 30
C6H C17 C16 SING N N 31
C6H C16 C15 SING N N 32
C6H C01 H1 SING N N 33
C6H C01 H2 SING N N 34
C6H C01 H3 SING N N 35
C6H C07 H4 SING N N 36
C6H C07 H5 SING N N 37
C6H C08 H6 SING N N 38
C6H C08 H7 SING N N 39
C6H C09 H8 SING N N 40
C6H C10 H9 SING N N 41
C6H C10 H10 SING N N 42
C6H C11 H11 SING N N 43
C6H C11 H12 SING N N 44
C6H C13 H14 SING N N 45
C6H C13 H15 SING N N 46
C6H C14 H16 SING N N 47
C6H C15 H17 SING N N 48
C6H C15 H18 SING N N 49
C6H C16 H19 SING N N 50
C6H C16 H20 SING N N 51
C6H C17 H21 SING N N 52
C6H C17 H22 SING N N 53
C6H C18 H23 SING N N 54
C6H C18 H24 SING N N 55
C6H C19 H25 SING N N 56
C6H C19 H26 SING N N 57
C6H C20 H27 SING N N 58
C6H C20 H28 SING N N 59
C6H C21 H29 SING N N 60
C6H C21 H30 SING N N 61
C6H C22 H31 SING N N 62
C6H N26 H32 SING N N 63
C6H C27 H33 SING N N 64
C6H C28 H34 SING N N 65
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
C6H InChI InChI 1.03 InChI=1S/C24H33ClN2O2/c1-29-24-19-9-12-26-23(19)21(25)15-20(24)22(28)8-7-17-10-13-27(14-11-17)16-18-5-3-2-4-6-18/h9,12,15,17-18,26H,2-8,10-11,13-14,16H2,1H3
C6H InChIKey InChI 1.03 DUUYHLUSDHATNS-UHFFFAOYSA-N
C6H SMILES_CANONICAL CACTVS 3.385 COc1c(cc(Cl)c2[nH]ccc12)C(=O)CCC3CCN(CC3)CC4CCCCC4
C6H SMILES CACTVS 3.385 COc1c(cc(Cl)c2[nH]ccc12)C(=O)CCC3CCN(CC3)CC4CCCCC4
C6H SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 COc1c2cc[nH]c2c(cc1C(=O)CCC3CCN(CC3)CC4CCCCC4)Cl
C6H SMILES "OpenEye OEToolkits" 2.0.6 COc1c2cc[nH]c2c(cc1C(=O)CCC3CCN(CC3)CC4CCCCC4)Cl
#
_pdbx_chem_comp_identifier.comp_id C6H
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.6
_pdbx_chem_comp_identifier.identifier
1-(7-chloranyl-4-methoxy-1~{H}-indol-5-yl)-3-[1-(cyclohexylmethyl)piperidin-4-yl]propan-1-one
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
C6H 'Create component' 2017-11-15 EBI
C6H 'Initial release' 2018-11-21 RCSB
C6H 'Modify synonyms' 2020-06-05 PDBE
#
_pdbx_chem_comp_synonyms.ordinal 1
_pdbx_chem_comp_synonyms.comp_id C6H
_pdbx_chem_comp_synonyms.name MR28926
_pdbx_chem_comp_synonyms.provenance ?
_pdbx_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_synonyms.comp_id C6H
_pdbe_chem_comp_synonyms.name MR28926
_pdbe_chem_comp_synonyms.provenance wwPDB
_pdbe_chem_comp_synonyms.type ?
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
C6H C01 C 18.588 3.375 1
C6H O02 O 17.290 2.625 2
C6H C03 C 17.290 1.125 3
C6H C04 C 15.990 0.375 4
C6H C05 C 14.691 1.125 5
C6H O06 O 14.691 2.625 6
C6H C07 C 13.392 0.375 7
C6H C08 C 12.093 1.125 8
C6H C09 C 10.794 0.375 9
C6H C10 C 10.794 -1.125 10
C6H C11 C 9.495 -1.875 11
C6H N12 N 8.196 -1.125 12
C6H C13 C 6.897 -1.875 13
C6H C14 C 5.598 -1.125 14
C6H C15 C 4.299 -1.875 15
C6H C16 C 3.000 -1.125 16
C6H C17 C 3.000 0.375 17
C6H C18 C 4.299 1.125 18
C6H C19 C 5.598 0.375 19
C6H C20 C 8.196 0.375 20
C6H C21 C 9.495 1.125 21
C6H C22 C 15.990 -1.125 22
C6H C23 C 17.290 -1.875 23
C6H CL Cl 17.290 -3.375 24
C6H C25 C 18.588 -1.125 25
C6H N26 N 20.008 -1.582 26
C6H C27 C 20.883 -0.375 27
C6H C28 C 20.008 0.832 28
C6H C29 C 18.588 0.375 29
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
C6H CL C23 SINGLE NONE 1
C6H C22 C23 DOUBLE NONE 2
C6H C22 C04 SINGLE NONE 3
C6H O06 C05 DOUBLE NONE 4
C6H C23 C25 SINGLE NONE 5
C6H C05 C04 SINGLE NONE 6
C6H C05 C07 SINGLE NONE 7
C6H C08 C07 SINGLE NONE 8
C6H C08 C09 SINGLE NONE 9
C6H C04 C03 DOUBLE NONE 10
C6H C25 N26 SINGLE NONE 11
C6H C25 C29 DOUBLE NONE 12
C6H C21 C09 SINGLE NONE 13
C6H C21 C20 SINGLE NONE 14
C6H N26 C27 SINGLE NONE 15
C6H C09 C10 SINGLE NONE 16
C6H C03 C29 SINGLE NONE 17
C6H C03 O02 SINGLE NONE 18
C6H C29 C28 SINGLE NONE 19
C6H C20 N12 SINGLE NONE 20
C6H C27 C28 DOUBLE NONE 21
C6H O02 C01 SINGLE NONE 22
C6H C10 C11 SINGLE NONE 23
C6H C18 C19 SINGLE NONE 24
C6H C18 C17 SINGLE NONE 25
C6H N12 C11 SINGLE NONE 26
C6H N12 C13 SINGLE NONE 27
C6H C19 C14 SINGLE NONE 28
C6H C14 C13 SINGLE NONE 29
C6H C14 C15 SINGLE NONE 30
C6H C17 C16 SINGLE NONE 31
C6H C16 C15 SINGLE NONE 32
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
C6H MurckoScaffold S1 scaffold 'O=C(CCC1CCN(CC2CCCCC2)CC1)c1ccc2[nH]ccc2c1' InChI=1S/C23H32N2O/c26-23(21-7-8-22-20(16-21)10-13-24-22)9-6-18-11-14-25(15-12-18)17-19-4-2-1-3-5-19/h7-8,10,13,16,18-19,24H,1-6,9,11-12,14-15,17H2 JBJVWRHVBXWURS-UHFFFAOYSA-N
C6H cyclohexane F1 fragment C1CCCCC1 InChI=1S/C6H12/c1-2-4-6-5-3-1/h1-6H2 XDTMQSROBMDMFD-UHFFFAOYSA-N
C6H indole F2 fragment 'c1ccc2[nH]ccc2c1' InChI=1S/C8H7N/c1-2-4-8-7(3-1)5-6-9-8/h1-6,9H SIKJAQJRHWYJAI-UHFFFAOYSA-N
C6H phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
C6H pyrrole F4 fragment 'c1cc[nH]c1' InChI=1S/C4H5N/c1-2-4-5-3-1/h1-5H KAESVJOAVNADME-UHFFFAOYSA-N
C6H Z104477350 F5 fragment CC(=O)c1cccc(Cl)c1 InChI=1S/C8H7ClO/c1-6(10)7-3-2-4-8(9)5-7/h2-5H,1H3 UUWJBXKHMMQDED-UHFFFAOYSA-N
C6H Z54462534 F6 fragment CCC(=O)c1ccccc1OC InChI=1S/C10H12O2/c1-3-9(11)8-6-4-5-7-10(8)12-2/h4-7H,3H2,1-2H3 LEAJWPFHMHVEKV-UHFFFAOYSA-N
C6H Z1429867185 F7 fragment 'COc1cccc2[nH]ccc12' InChI=1S/C9H9NO/c1-11-9-4-2-3-8-7(9)5-6-10-8/h2-6,10H,1H3 LUNOXNMCFPFPMO-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
C6H C03 S1 1
C6H C04 S1 1
C6H C05 S1 1
C6H O06 S1 1
C6H C07 S1 1
C6H C08 S1 1
C6H C09 S1 1
C6H C10 S1 1
C6H C11 S1 1
C6H N12 S1 1
C6H C13 S1 1
C6H C14 S1 1
C6H C15 S1 1
C6H C16 S1 1
C6H C17 S1 1
C6H C18 S1 1
C6H C19 S1 1
C6H C20 S1 1
C6H C21 S1 1
C6H C22 S1 1
C6H C23 S1 1
C6H C25 S1 1
C6H N26 S1 1
C6H C27 S1 1
C6H C28 S1 1
C6H C29 S1 1
C6H C14 F1 1
C6H C19 F1 1
C6H C18 F1 1
C6H C17 F1 1
C6H C16 F1 1
C6H C15 F1 1
C6H C25 F2 1
C6H C29 F2 1
C6H C28 F2 1
C6H C27 F2 1
C6H N26 F2 1
C6H C03 F2 1
C6H C04 F2 1
C6H C22 F2 1
C6H C23 F2 1
C6H C03 F3 1
C6H C04 F3 1
C6H C22 F3 1
C6H C23 F3 1
C6H C25 F3 1
C6H C29 F3 1
C6H C25 F4 1
C6H C29 F4 1
C6H C28 F4 1
C6H C27 F4 1
C6H N26 F4 1
C6H C07 F5 1
C6H C05 F5 1
C6H O06 F5 1
C6H C04 F5 1
C6H C03 F5 1
C6H C29 F5 1
C6H C25 F5 1
C6H C23 F5 1
C6H CL F5 1
C6H C22 F5 1
C6H C08 F6 1
C6H C07 F6 1
C6H C05 F6 1
C6H O06 F6 1
C6H C04 F6 1
C6H C22 F6 1
C6H C23 F6 1
C6H C25 F6 1
C6H C29 F6 1
C6H C03 F6 1
C6H O02 F6 1
C6H C01 F6 1
C6H C01 F7 1
C6H O02 F7 1
C6H C03 F7 1
C6H C04 F7 1
C6H C22 F7 1
C6H C23 F7 1
C6H C25 F7 1
C6H N26 F7 1
C6H C27 F7 1
C6H C28 F7 1
C6H C29 F7 1
#
_pdbe_chem_comp_rdkit_properties.comp_id C6H
_pdbe_chem_comp_rdkit_properties.exactmw 416.223
_pdbe_chem_comp_rdkit_properties.amw 416.993
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 4
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 8
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 29
_pdbe_chem_comp_rdkit_properties.NumAtoms 62
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 5
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.625
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 2
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 224.910
_pdbe_chem_comp_rdkit_properties.tpsa 45.330
_pdbe_chem_comp_rdkit_properties.CrippenClogP 5.140
_pdbe_chem_comp_rdkit_properties.CrippenMR 116.082
_pdbe_chem_comp_rdkit_properties.chi0v 14.845
_pdbe_chem_comp_rdkit_properties.chi1v 8.047
_pdbe_chem_comp_rdkit_properties.chi2v 3.695
_pdbe_chem_comp_rdkit_properties.chi3v 3.695
_pdbe_chem_comp_rdkit_properties.chi4v 2.423
_pdbe_chem_comp_rdkit_properties.chi0n 47.089
_pdbe_chem_comp_rdkit_properties.chi1n 24.117
_pdbe_chem_comp_rdkit_properties.chi2n 3.421
_pdbe_chem_comp_rdkit_properties.chi3n 3.421
_pdbe_chem_comp_rdkit_properties.chi4n 2.191
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.520
_pdbe_chem_comp_rdkit_properties.kappa1 4.782
_pdbe_chem_comp_rdkit_properties.kappa2 9.527
_pdbe_chem_comp_rdkit_properties.kappa3 4.803
_pdbe_chem_comp_rdkit_properties.Phi 1.571
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
C6H UniChem PubChem 134828071
C6H UniChem BindingDb 50507209
C6H UniChem BRENDA 230806
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
C6H C01 5.133 1.329 2.744 ETKDGv3 1
C6H O02 4.407 0.186 2.317 ETKDGv3 2
C6H C03 4.082 -0.142 0.989 ETKDGv3 3
C6H C04 3.375 -1.279 0.752 ETKDGv3 4
C6H C05 2.847 -2.117 1.854 ETKDGv3 5
C6H O06 2.996 -3.368 1.797 ETKDGv3 6
C6H C07 2.089 -1.526 3.015 ETKDGv3 7
C6H C08 0.616 -1.979 3.075 ETKDGv3 8
C6H C09 -0.316 -1.488 1.932 ETKDGv3 9
C6H C10 -0.068 -0.031 1.501 ETKDGv3 10
C6H C11 -1.120 0.440 0.472 ETKDGv3 11
C6H N12 -1.739 -0.678 -0.286 ETKDGv3 12
C6H C13 -2.390 -0.202 -1.529 ETKDGv3 13
C6H C14 -3.697 0.585 -1.230 ETKDGv3 14
C6H C15 -3.487 2.111 -1.325 ETKDGv3 15
C6H C16 -4.738 2.887 -0.862 ETKDGv3 16
C6H C17 -6.054 2.111 -1.067 ETKDGv3 17
C6H C18 -5.983 1.198 -2.294 ETKDGv3 18
C6H C19 -4.848 0.156 -2.181 ETKDGv3 19
C6H C20 -0.745 -1.728 -0.584 ETKDGv3 20
C6H C21 -0.318 -2.438 0.712 ETKDGv3 21
C6H C22 3.120 -1.728 -0.651 ETKDGv3 22
C6H C23 3.514 -0.986 -1.694 ETKDGv3 23
C6H CL 3.181 -1.507 -3.337 ETKDGv3 24
C6H C25 4.226 0.269 -1.428 ETKDGv3 25
C6H N26 4.695 1.194 -2.395 ETKDGv3 26
C6H C27 5.289 2.228 -1.621 ETKDGv3 27
C6H C28 5.194 1.961 -0.322 ETKDGv3 28
C6H C29 4.499 0.672 -0.196 ETKDGv3 29
C6H H1 6.149 1.326 2.297 ETKDGv3 30
C6H H2 5.242 1.289 3.847 ETKDGv3 31
C6H H3 4.574 2.252 2.488 ETKDGv3 32
C6H H4 2.593 -1.854 3.949 ETKDGv3 33
C6H H5 2.131 -0.418 3.013 ETKDGv3 34
C6H H6 0.570 -3.088 3.148 ETKDGv3 35
C6H H7 0.202 -1.593 4.033 ETKDGv3 36
C6H H8 -1.350 -1.515 2.348 ETKDGv3 37
C6H H9 0.935 0.054 1.032 ETKDGv3 38
C6H H10 -0.090 0.640 2.388 ETKDGv3 39
C6H H11 -1.921 0.973 1.028 ETKDGv3 40
C6H H12 -0.631 1.169 -0.212 ETKDGv3 41
C6H H14 -2.651 -1.083 -2.157 ETKDGv3 42
C6H H15 -1.684 0.404 -2.142 ETKDGv3 43
C6H H16 -4.020 0.345 -0.191 ETKDGv3 44
C6H H17 -2.622 2.437 -0.714 ETKDGv3 45
C6H H18 -3.261 2.380 -2.381 ETKDGv3 46
C6H H19 -4.639 3.135 0.218 ETKDGv3 47
C6H H20 -4.787 3.849 -1.418 ETKDGv3 48
C6H H21 -6.894 2.829 -1.185 ETKDGv3 49
C6H H22 -6.266 1.492 -0.167 ETKDGv3 50
C6H H23 -5.819 1.827 -3.196 ETKDGv3 51
C6H H24 -6.955 0.675 -2.424 ETKDGv3 52
C6H H25 -4.452 -0.025 -3.205 ETKDGv3 53
C6H H26 -5.269 -0.806 -1.815 ETKDGv3 54
C6H H27 0.145 -1.285 -1.087 ETKDGv3 55
C6H H28 -1.167 -2.498 -1.267 ETKDGv3 56
C6H H29 -1.023 -3.274 0.917 ETKDGv3 57
C6H H30 0.674 -2.898 0.550 ETKDGv3 58
C6H H31 2.599 -2.660 -0.831 ETKDGv3 59
C6H H32 4.613 1.141 -3.435 ETKDGv3 60
C6H H33 5.748 3.114 -2.040 ETKDGv3 61
C6H H34 5.567 2.611 0.453 ETKDGv3 62
#