data_BUP
#
_chem_comp.id BUP
_chem_comp.name "5-bromouridine 5'-(tetrahydrogen triphosphate)"
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C9 H14 Br N2 O15 P3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2010-06-08
_chem_comp.pdbx_modified_date 2011-06-10
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 563.037
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code BUP
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 3N6N
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
BUP BR BR BR 0 0 N N N N N N 0.564 -48.304 7.117 -6.736 -2.422 -0.709 BR BUP 1
BUP C1 C1 C 0 1 N N N N N N 1.740 -47.259 7.126 -5.478 -1.266 0.099 C1 BUP 2
BUP N1 N1 N 0 1 N N N N N N 4.247 -46.722 7.467 -4.453 -0.376 2.063 N1 BUP 3
BUP O1 O1 O 0 1 N N N N N N 3.408 -49.043 7.759 -6.072 -1.898 2.216 O1 BUP 4
BUP P1 P1 P 0 1 N N N N N N -1.360 -41.503 10.096 2.653 1.418 0.807 P1 BUP 5
BUP C2 C2 C 0 1 N N N N N N 1.466 -45.815 6.804 -4.681 -0.483 -0.660 C2 BUP 6
BUP N2 N2 N 0 1 N N N N N N 2.563 -44.835 6.806 -3.776 0.349 -0.058 N2 BUP 7
BUP O2 O2 O 0 1 N N N N N N 5.031 -44.363 7.157 -2.858 1.136 1.797 O2 BUP 8
BUP P2 P2 P 0 1 N N N N N N -1.230 -38.691 9.314 5.111 -0.229 0.632 P2 BUP 9
BUP C3 C3 C 0 1 N N N N N N 3.976 -45.286 7.146 -3.672 0.394 1.283 C3 BUP 10
BUP O3 O3 O 0 1 N N N N N N 1.431 -42.839 7.511 -1.524 1.000 -0.534 O3 BUP 11
BUP P3 P3 P 0 1 N N N N N N -3.043 -37.579 11.286 7.003 -1.872 -0.951 P3 BUP 12
BUP C4 C4 C 0 1 N N N N N N 3.147 -47.701 7.459 -5.361 -1.205 1.510 C4 BUP 13
BUP O4 O4 O 0 1 N N N N N N 2.476 -42.384 4.326 -4.235 3.215 -1.337 O4 BUP 14
BUP C5 C5 C 0 1 N N S N N N 0.318 -42.582 5.395 -1.811 3.339 -0.986 C5 BUP 15
BUP O5 O5 O 0 1 N N N N N N 0.034 -41.531 4.498 -1.915 3.894 -2.299 O5 BUP 16
BUP C6 C6 C 0 1 N N R N N N 1.663 -43.212 5.125 -3.153 2.696 -0.561 C6 BUP 17
BUP O6 O6 O 0 1 N N N N N N -0.753 -42.497 8.914 1.309 1.426 -0.078 O6 BUP 18
BUP C7 C7 C 0 1 N N R N N N 2.311 -43.422 6.500 -2.911 1.198 -0.881 C7 BUP 19
BUP O7 O7 O 0 1 N N N N N N -0.588 -40.032 10.051 3.571 0.167 0.378 O7 BUP 20
BUP C8 C8 C 0 1 N N R N N N 0.399 -42.055 6.831 -0.810 2.167 -0.975 C8 BUP 21
BUP O8 O8 O 0 1 N N N N N N -1.097 -42.196 11.575 2.269 1.293 2.365 O8 BUP 22
BUP C9 C9 C 0 1 N N N N N N -0.955 -42.222 7.545 0.336 2.471 -0.008 C9 BUP 23
BUP O9 O9 O 0 1 N N N N N N -2.800 -41.335 9.901 3.399 2.677 0.583 O9 BUP 24
BUP O10 O10 O 0 1 N N N N N N -2.765 -38.396 9.868 5.573 -1.314 -0.464 O10 BUP 25
BUP O11 O11 O 0 1 N N N N N N -1.263 -38.909 7.673 5.267 -0.857 2.107 O11 BUP 26
BUP O12 O12 O 0 1 N N N N N N -0.375 -37.539 9.610 5.957 0.979 0.518 O12 BUP 27
BUP O13 O13 O 0 1 N N N N N N -3.732 -36.117 10.940 7.533 -2.975 0.095 O13 BUP 28
BUP O14 O14 O 0 1 N N N N N N -1.625 -37.342 12.102 6.849 -2.543 -2.407 O14 BUP 29
BUP O15 O15 O 0 1 N N N N N N -3.958 -38.354 12.126 7.970 -0.755 -1.023 O15 BUP 30
BUP HN1 HN1 H 0 1 N N N N N N 5.177 -47.017 7.687 -4.365 -0.331 3.028 HN1 BUP 31
BUP H2 H2 H 0 1 N N N N N N 0.461 -45.497 6.571 -4.758 -0.513 -1.737 H2 BUP 32
BUP HO4 HO4 H 0 1 N N N N N N 3.312 -42.810 4.176 -4.368 4.167 -1.240 HO4 BUP 33
BUP H5 H5 H 0 1 N N N N N N -0.492 -43.314 5.261 -1.512 4.105 -0.271 H5 BUP 34
BUP HO5 HO5 H 0 1 N N N N N N -0.818 -41.163 4.701 -2.574 4.598 -2.377 HO5 BUP 35
BUP H6 H6 H 0 1 N N N N N N 1.545 -44.156 4.573 -3.335 2.842 0.503 H6 BUP 36
BUP H7 H7 H 0 1 N N N N N N 3.294 -42.929 6.495 -3.075 0.998 -1.940 H7 BUP 37
BUP H8 H8 H 0 1 N N N N N N 0.645 -40.983 6.841 -0.418 2.004 -1.979 H8 BUP 38
BUP HO8 HO8 H 0 1 N N N N N N -1.930 -42.349 12.006 1.778 0.489 2.586 HO8 BUP 39
BUP H9 H9 H 0 1 N N N N N N -1.507 -43.055 7.086 -0.053 2.537 1.008 H9 BUP 40
BUP H9A H9A H 0 1 N N N N N N -1.535 -41.293 7.444 0.801 3.418 -0.282 H9A BUP 41
BUP HO11 HO11 H 0 0 N N N N N N -0.724 -38.248 7.254 4.739 -1.653 2.253 HO11 BUP 42
BUP HO13 HO13 H 0 0 N N N N N N -4.586 -36.063 11.352 6.947 -3.738 0.193 HO13 BUP 43
BUP HO14 HO14 H 0 0 N N N N N N -1.678 -37.754 12.956 7.673 -2.902 -2.763 HO14 BUP 44
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
BUP BR C1 SING N N 1
BUP C1 C2 DOUB N N 2
BUP C1 C4 SING N N 3
BUP N1 C3 SING N N 4
BUP N1 C4 SING N N 5
BUP O1 C4 DOUB N N 6
BUP P1 O6 SING N N 7
BUP P1 O7 SING N N 8
BUP P1 O8 SING N N 9
BUP P1 O9 DOUB N N 10
BUP C2 N2 SING N N 11
BUP N2 C3 SING N N 12
BUP N2 C7 SING N N 13
BUP O2 C3 DOUB N N 14
BUP P2 O7 SING N N 15
BUP P2 O10 SING N N 16
BUP P2 O11 SING N N 17
BUP P2 O12 DOUB N N 18
BUP O3 C7 SING N N 19
BUP O3 C8 SING N N 20
BUP P3 O10 SING N N 21
BUP P3 O13 SING N N 22
BUP P3 O14 SING N N 23
BUP P3 O15 DOUB N N 24
BUP O4 C6 SING N N 25
BUP C5 O5 SING N N 26
BUP C5 C6 SING N N 27
BUP C5 C8 SING N N 28
BUP C6 C7 SING N N 29
BUP O6 C9 SING N N 30
BUP C8 C9 SING N N 31
BUP N1 HN1 SING N N 32
BUP C2 H2 SING N N 33
BUP O4 HO4 SING N N 34
BUP C5 H5 SING N N 35
BUP O5 HO5 SING N N 36
BUP C6 H6 SING N N 37
BUP C7 H7 SING N N 38
BUP C8 H8 SING N N 39
BUP O8 HO8 SING N N 40
BUP C9 H9 SING N N 41
BUP C9 H9A SING N N 42
BUP O11 HO11 SING N N 43
BUP O13 HO13 SING N N 44
BUP O14 HO14 SING N N 45
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
BUP SMILES ACDLabs 12.01 O=P(O)(O)OP(=O)(O)OP(=O)(O)OCC2OC(N1C(=O)NC(=O)C(Br)=C1)C(O)C2O
BUP SMILES_CANONICAL CACTVS 3.370 O[C@H]1[C@@H](O)[C@@H](O[C@@H]1CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)N2C=C(Br)C(=O)NC2=O
BUP SMILES CACTVS 3.370 O[CH]1[CH](O)[CH](O[CH]1CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)N2C=C(Br)C(=O)NC2=O
BUP SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 C1=C(C(=O)NC(=O)N1[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)(O)O[P@@](=O)(O)OP(=O)(O)O)O)O)Br
BUP SMILES "OpenEye OEToolkits" 1.7.0 C1=C(C(=O)NC(=O)N1C2C(C(C(O2)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O)Br
BUP InChI InChI 1.03 InChI=1S/C9H14BrN2O15P3/c10-3-1-12(9(16)11-7(3)15)8-6(14)5(13)4(25-8)2-24-29(20,21)27-30(22,23)26-28(17,18)19/h1,4-6,8,13-14H,2H2,(H,20,21)(H,22,23)(H,11,15,16)(H2,17,18,19)/t4-,5-,6-,8-/m1/s1
BUP InChIKey InChI 1.03 IWFHOSULCAJGRM-UAKXSSHOSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
BUP "SYSTEMATIC NAME" ACDLabs 12.01 "5-bromouridine 5'-(tetrahydrogen triphosphate)"
BUP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "[[(2R,3S,4R,5R)-5-(5-bromo-2,4-dioxo-pyrimidin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl] phosphono hydrogen phosphate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
BUP 'Create component' 2010-06-08 PDBJ
BUP 'Modify descriptor' 2011-06-04 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
BUP BR Br 3.733 5.453 1
BUP C1 C 5.032 4.703 2
BUP N1 N 7.630 4.703 3
BUP O1 O 6.331 6.953 4
BUP P1 P 10.336 -3.626 5
BUP C2 C 5.032 3.203 6
BUP N2 N 6.331 2.453 7
BUP O2 O 8.929 2.453 8
BUP P2 P 12.710 -4.683 9
BUP C3 C 7.630 3.203 10
BUP O3 O 7.545 0.071 11
BUP P3 P 15.083 -5.739 12
BUP C4 C 6.331 5.453 13
BUP O4 O 3.691 0.535 14
BUP C5 C 5.581 -1.356 15
BUP O5 O 4.699 -2.569 16
BUP C6 C 5.118 0.071 17
BUP O6 O 9.455 -2.412 18
BUP C7 C 6.331 0.953 19
BUP O7 O 11.218 -4.839 20
BUP C8 C 7.081 -1.356 21
BUP O8 O 11.550 -2.744 22
BUP C9 C 7.963 -2.569 23
BUP O9 O 9.123 -4.508 24
BUP O10 O 14.202 -4.526 25
BUP O11 O 12.867 -6.174 26
BUP O12 O 12.553 -3.191 27
BUP O13 O 15.965 -6.953 28
BUP O14 O 16.297 -4.858 29
BUP O15 O 13.870 -6.621 30
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
BUP BR C1 SINGLE NONE 1
BUP C1 C2 DOUBLE NONE 2
BUP C1 C4 SINGLE NONE 3
BUP N1 C3 SINGLE NONE 4
BUP N1 C4 SINGLE NONE 5
BUP O1 C4 DOUBLE NONE 6
BUP P1 O6 SINGLE NONE 7
BUP P1 O7 SINGLE NONE 8
BUP P1 O8 SINGLE BEGINDASH 9
BUP P1 O9 DOUBLE NONE 10
BUP C2 N2 SINGLE NONE 11
BUP N2 C3 SINGLE NONE 12
BUP C7 N2 SINGLE BEGINDASH 13
BUP O2 C3 DOUBLE NONE 14
BUP P2 O7 SINGLE NONE 15
BUP P2 O10 SINGLE NONE 16
BUP P2 O11 SINGLE BEGINWEDGE 17
BUP P2 O12 DOUBLE NONE 18
BUP O3 C7 SINGLE NONE 19
BUP O3 C8 SINGLE NONE 20
BUP P3 O10 SINGLE NONE 21
BUP P3 O13 SINGLE NONE 22
BUP P3 O14 SINGLE NONE 23
BUP P3 O15 DOUBLE NONE 24
BUP C6 O4 SINGLE BEGINWEDGE 25
BUP C5 O5 SINGLE BEGINWEDGE 26
BUP C5 C6 SINGLE NONE 27
BUP C5 C8 SINGLE NONE 28
BUP C6 C7 SINGLE NONE 29
BUP O6 C9 SINGLE NONE 30
BUP C8 C9 SINGLE BEGINDASH 31
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
BUP MurckoScaffold S1 scaffold 'O=c1ccn([C@H]2CCCO2)c(=O)[nH]1' InChI=1S/C8H10N2O3/c11-6-3-4-10(8(12)9-6)7-2-1-5-13-7/h3-4,7H,1-2,5H2,(H,9,11,12)/t7-/m1/s1 CWWIKVUHBBTKHC-SSDOTTSWSA-N
BUP phosphate F1 fragment O=P(O)(O)O InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4) NBIIXXVUZAFLBC-UHFFFAOYSA-N
BUP pyrimidine F2 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
BUP ribose F3 fragment OCC1OCC(O)C1O InChI=1S/C5H10O4/c6-1-4-5(8)3(7)2-9-4/h3-8H,1-2H2 KZVAAIRBJJYZOW-UHFFFAOYSA-N
BUP Z275128628 F4 fragment 'O=c1[nH]cc(Br)c(=O)[nH]1' InChI=1S/C4H3BrN2O2/c5-2-1-6-4(9)7-3(2)8/h1H,(H2,6,7,8,9) LQLQRFGHAALLLE-UHFFFAOYSA-N
BUP Z285136922 F5 fragment Brc1cncnc1 InChI=1S/C4H3BrN2/c5-4-1-6-3-7-2-4/h1-3H GYCPLYCTMDTEPU-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
BUP C1 S1 1
BUP N1 S1 1
BUP O1 S1 1
BUP C2 S1 1
BUP N2 S1 1
BUP O2 S1 1
BUP C3 S1 1
BUP O3 S1 1
BUP C4 S1 1
BUP C5 S1 1
BUP C6 S1 1
BUP C7 S1 1
BUP C8 S1 1
BUP O6 F1 1
BUP P1 F1 1
BUP O9 F1 1
BUP O7 F1 1
BUP O8 F1 1
BUP O7 F1 2
BUP P2 F1 2
BUP O12 F1 2
BUP O10 F1 2
BUP O11 F1 2
BUP O10 F1 3
BUP P3 F1 3
BUP O15 F1 3
BUP O13 F1 3
BUP O14 F1 3
BUP C1 F2 1
BUP C2 F2 1
BUP N2 F2 1
BUP C3 F2 1
BUP N1 F2 1
BUP C4 F2 1
BUP C6 F3 1
BUP C5 F3 1
BUP C8 F3 1
BUP O3 F3 1
BUP C7 F3 1
BUP C9 F3 1
BUP O6 F3 1
BUP O5 F3 1
BUP O4 F3 1
BUP BR F4 1
BUP C1 F4 1
BUP C2 F4 1
BUP N2 F4 1
BUP C3 F4 1
BUP O2 F4 1
BUP N1 F4 1
BUP C4 F4 1
BUP O1 F4 1
BUP BR F5 1
BUP C1 F5 1
BUP C2 F5 1
BUP N2 F5 1
BUP C3 F5 1
BUP N1 F5 1
BUP C4 F5 1
#
_pdbe_chem_comp_rdkit_properties.comp_id BUP
_pdbe_chem_comp_rdkit_properties.exactmw 561.879
_pdbe_chem_comp_rdkit_properties.amw 563.036
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 17
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 7
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 14
_pdbe_chem_comp_rdkit_properties.NumHBD 7
_pdbe_chem_comp_rdkit_properties.NumHBA 16
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 30
_pdbe_chem_comp_rdkit_properties.NumAtoms 44
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 21
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.556
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 6
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 193.206
_pdbe_chem_comp_rdkit_properties.tpsa 264.370
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.061
_pdbe_chem_comp_rdkit_properties.CrippenMR 94.979
_pdbe_chem_comp_rdkit_properties.chi0v 17.507
_pdbe_chem_comp_rdkit_properties.chi1v 11.602
_pdbe_chem_comp_rdkit_properties.chi2v 6.476
_pdbe_chem_comp_rdkit_properties.chi3v 6.476
_pdbe_chem_comp_rdkit_properties.chi4v 4.436
_pdbe_chem_comp_rdkit_properties.chi0n 27.238
_pdbe_chem_comp_rdkit_properties.chi1n 12.823
_pdbe_chem_comp_rdkit_properties.chi2n 2.445
_pdbe_chem_comp_rdkit_properties.chi3n 2.445
_pdbe_chem_comp_rdkit_properties.chi4n 1.495
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.550
_pdbe_chem_comp_rdkit_properties.kappa1 12.064
_pdbe_chem_comp_rdkit_properties.kappa2 9.132
_pdbe_chem_comp_rdkit_properties.kappa3 6.722
_pdbe_chem_comp_rdkit_properties.Phi 3.673
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
BUP UniChem 'Guide to Pharmacology' 1731
BUP UniChem ChEBI 88358
BUP UniChem ZINC ZINC000038149754
BUP UniChem 'PubChem TPHARMA' 14837595
BUP UniChem BindingDb 50199192
BUP UniChem MetaboLights MTBLC88358
BUP UniChem BRENDA 12382
BUP UniChem BRENDA 13421
BUP UniChem 'Probes And Drugs' PD051420
BUP UniChem Nikkaji J448.133J
BUP UniChem SureChEMBL SCHEMBL625390
BUP UniChem PubChem 9872620
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
BUP BR 0.529 -1.089 -3.402 ETKDGv3 1
BUP C1 -0.731 0.284 -2.964 ETKDGv3 2
BUP N1 -2.366 2.038 -3.693 ETKDGv3 3
BUP O1 -1.131 0.814 -5.242 ETKDGv3 4
BUP P1 2.470 -0.059 2.682 ETKDGv3 5
BUP C2 -1.006 0.542 -1.681 ETKDGv3 6
BUP N2 -1.938 1.576 -1.294 ETKDGv3 7
BUP O2 -3.536 3.144 -2.016 ETKDGv3 8
BUP P2 2.949 0.559 0.038 ETKDGv3 9
BUP C3 -2.655 2.295 -2.319 ETKDGv3 10
BUP O3 -1.049 1.691 0.894 ETKDGv3 11
BUP P3 3.516 -2.026 -0.727 ETKDGv3 12
BUP C4 -1.400 1.043 -4.033 ETKDGv3 13
BUP O4 -4.329 1.458 1.313 ETKDGv3 14
BUP C5 -2.479 -0.095 1.555 ETKDGv3 15
BUP O5 -3.227 -0.494 2.675 ETKDGv3 16
BUP C6 -3.276 0.806 0.639 ETKDGv3 17
BUP O6 1.022 0.841 2.534 ETKDGv3 18
BUP C7 -2.232 1.810 0.130 ETKDGv3 19
BUP O7 3.645 0.522 1.594 ETKDGv3 20
BUP C8 -1.300 0.789 1.949 ETKDGv3 21
BUP O8 2.234 -1.720 2.424 ETKDGv3 22
BUP C9 -0.041 -0.033 2.237 ETKDGv3 23
BUP O9 3.000 0.136 4.085 ETKDGv3 24
BUP O10 2.253 -0.944 -0.362 ETKDGv3 25
BUP O11 4.148 0.974 -1.083 ETKDGv3 26
BUP O12 1.877 1.624 -0.014 ETKDGv3 27
BUP O13 4.217 -1.617 -2.212 ETKDGv3 28
BUP O14 2.872 -3.586 -0.838 ETKDGv3 29
BUP O15 4.573 -2.012 0.357 ETKDGv3 30
BUP HN1 -2.862 2.568 -4.445 ETKDGv3 31
BUP H2 -0.508 -0.043 -0.919 ETKDGv3 32
BUP HO4 -3.938 1.992 2.055 ETKDGv3 33
BUP H5 -2.141 -0.986 0.973 ETKDGv3 34
BUP HO5 -2.716 -1.225 3.109 ETKDGv3 35
BUP H6 -3.713 0.211 -0.194 ETKDGv3 36
BUP H7 -2.605 2.850 0.264 ETKDGv3 37
BUP H8 -1.558 1.378 2.859 ETKDGv3 38
BUP HO8 1.867 -2.066 3.277 ETKDGv3 39
BUP H9 -0.239 -0.700 3.106 ETKDGv3 40
BUP H9A 0.189 -0.646 1.337 ETKDGv3 41
BUP HO11 4.557 1.801 -0.721 ETKDGv3 42
BUP HO13 4.877 -2.335 -2.387 ETKDGv3 43
BUP HO14 2.180 -3.522 -1.542 ETKDGv3 44
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