data_BAP
#
_chem_comp.id BAP
_chem_comp.name 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C20 H16 O3"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces BPC
_chem_comp.formula_weight 304.339
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code BAP
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1DXA
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
BAP C1 C1 C 0 1 Y N N N N N -4.490 -2.431 15.602 -0.794 0.103 -4.781 C1 BAP 1
BAP C2 C2 C 0 1 Y N N N N N -5.033 -1.167 15.752 0.500 -0.038 -5.242 C2 BAP 2
BAP C3 C3 C 0 1 Y N N N N N -4.198 -0.046 15.655 1.567 -0.166 -4.373 C3 BAP 3
BAP C3A C3A C 0 1 Y N N N N N -2.817 -0.218 15.405 1.352 -0.156 -2.993 C3A BAP 4
BAP C4 C4 C 0 1 Y N N N N N -1.973 0.899 15.309 2.418 -0.285 -2.070 C4 BAP 5
BAP C5 C5 C 0 1 Y N N N N N -0.612 0.723 15.058 2.188 -0.274 -0.737 C5 BAP 6
BAP C5A C5A C 0 1 Y N N N N N -0.075 -0.571 14.858 0.874 -0.132 -0.228 C5A BAP 7
BAP C6 C6 C 0 1 Y N N N N N 1.286 -0.761 14.482 0.625 -0.124 1.153 C6 BAP 8
BAP C7 C7 C 0 1 Y N N N N N 1.769 -2.058 14.224 -0.663 0.018 1.618 C7 BAP 9
BAP C8 C8 C 0 1 Y N N N N N 0.928 -3.151 14.450 -1.730 0.148 0.736 C8 BAP 10
BAP C8A C8A C 0 1 Y N N N N N -0.418 -2.949 14.787 -1.524 0.141 -0.641 C8A BAP 11
BAP C9 C9 C 0 1 Y N N N N N -1.261 -4.064 14.906 -2.592 0.272 -1.562 C9 BAP 12
BAP C10 C10 C 0 1 Y N N N N N -2.603 -3.879 15.198 -2.364 0.261 -2.896 C10 BAP 13
BAP C1A C1A C 0 1 Y N N N N N -3.119 -2.590 15.347 -1.052 0.119 -3.408 C1A BAP 14
BAP C3B C3B C 0 1 Y N N N N N -2.282 -1.490 15.243 0.031 -0.012 -2.511 C3B BAP 15
BAP C5B C5B C 0 1 Y N N N N N -0.924 -1.667 14.967 -0.205 -0.001 -1.126 C5B BAP 16
BAP "C1'" "C1'" C 0 1 N N R N N N 3.168 -2.296 13.682 -0.989 0.050 3.090 "C1'" BAP 17
BAP "O1'" "O1'" O 0 1 N N N N N N 3.122 -3.263 12.653 -2.170 -0.719 3.328 "O1'" BAP 18
BAP "C2'" "C2'" C 0 1 N N R N N N 3.843 -1.049 13.108 0.160 -0.528 3.911 "C2'" BAP 19
BAP "O2'" "O2'" O 0 1 N N N N N N 5.209 -1.304 12.859 -0.079 -0.303 5.302 "O2'" BAP 20
BAP "C3'" "C3'" C 0 1 N N R N N N 3.699 0.097 14.104 1.455 0.175 3.488 "C3'" BAP 21
BAP "O3'" "O3'" O 0 1 N N N N N N 4.262 -0.267 15.349 1.261 1.591 3.505 "O3'" BAP 22
BAP "C4'" "C4'" C 0 1 N N N N N N 2.213 0.428 14.286 1.808 -0.278 2.074 "C4'" BAP 23
BAP H1 H1 H 0 1 N N N N N N -5.160 -3.268 15.672 -1.609 0.201 -5.484 H1 BAP 24
BAP H2 H2 H 0 1 N N N N N N -6.088 -1.133 15.940 0.682 -0.048 -6.306 H2 BAP 25
BAP H3 H3 H 0 1 N N N N N N -4.616 0.943 15.777 2.569 -0.275 -4.762 H3 BAP 26
BAP H4 H4 H 0 1 N N N N N N -2.366 1.898 15.421 3.429 -0.394 -2.435 H4 BAP 27
BAP H5 H5 H 0 1 N N N N N N -0.013 1.615 15.011 3.018 -0.375 -0.052 H5 BAP 28
BAP H8 H8 H 0 1 N N N N N N 1.288 -4.161 14.315 -2.732 0.256 1.124 H8 BAP 29
BAP H9 H9 H 0 1 N N N N N N -0.894 -5.067 14.770 -3.601 0.383 -1.195 H9 BAP 30
BAP H10 H10 H 0 1 N N N N N N -3.244 -4.724 15.310 -3.194 0.363 -3.579 H10 BAP 31
BAP "H1'" "H1'" H 0 1 N N N N N N 3.778 -2.694 14.494 -1.165 1.081 3.397 "H1'" BAP 32
BAP HO1 HO1 H 0 1 N N N N N N 4.013 -3.389 12.318 -2.877 -0.313 2.809 HO1 BAP 33
BAP "H2'" "H2'" H 0 1 N N N N N N 3.364 -0.771 12.169 0.245 -1.598 3.721 "H2'" BAP 34
BAP HO2 HO2 H 0 1 N N N N N N 5.639 -1.482 13.699 -0.910 -0.748 5.517 HO2 BAP 35
BAP "H3'" "H3'" H 0 1 N N N N N N 4.236 0.971 13.733 2.260 -0.093 4.172 "H3'" BAP 36
BAP HO3 HO3 H 0 1 N N N N N N 4.176 0.475 15.950 2.096 1.990 3.225 HO3 BAP 37
BAP "H4'1" "1H4'" H 0 0 N N N N N N 2.153 1.035 15.186 2.635 0.324 1.699 "H4'1" BAP 38
BAP "H4'2" "2H4'" H 0 0 N N N N N N 2.085 1.149 15.126 2.110 -1.325 2.098 "H4'2" BAP 39
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
BAP C1 C2 DOUB Y N 1
BAP C1 C1A SING Y N 2
BAP C1 H1 SING N N 3
BAP C2 C3 SING Y N 4
BAP C2 H2 SING N N 5
BAP C3 C3A DOUB Y N 6
BAP C3 H3 SING N N 7
BAP C3A C4 SING Y N 8
BAP C3A C3B SING Y N 9
BAP C4 C5 DOUB Y N 10
BAP C4 H4 SING N N 11
BAP C5 C5A SING Y N 12
BAP C5 H5 SING N N 13
BAP C5A C6 DOUB Y N 14
BAP C5A C5B SING Y N 15
BAP C6 C7 SING Y N 16
BAP C6 "C4'" SING N N 17
BAP C7 C8 DOUB Y N 18
BAP C7 "C1'" SING N N 19
BAP C8 C8A SING Y N 20
BAP C8 H8 SING N N 21
BAP C8A C9 DOUB Y N 22
BAP C8A C5B SING Y N 23
BAP C9 C10 SING Y N 24
BAP C9 H9 SING N N 25
BAP C10 C1A DOUB Y N 26
BAP C10 H10 SING N N 27
BAP C1A C3B SING Y N 28
BAP C3B C5B DOUB Y N 29
BAP "C1'" "O1'" SING N N 30
BAP "C1'" "C2'" SING N N 31
BAP "C1'" "H1'" SING N N 32
BAP "O1'" HO1 SING N N 33
BAP "C2'" "O2'" SING N N 34
BAP "C2'" "C3'" SING N N 35
BAP "C2'" "H2'" SING N N 36
BAP "O2'" HO2 SING N N 37
BAP "C3'" "O3'" SING N N 38
BAP "C3'" "C4'" SING N N 39
BAP "C3'" "H3'" SING N N 40
BAP "O3'" HO3 SING N N 41
BAP "C4'" "H4'1" SING N N 42
BAP "C4'" "H4'2" SING N N 43
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
BAP SMILES ACDLabs 10.04 OC5c2c(c1ccc4c3c1c(c2)ccc3ccc4)CC(O)C5O
BAP SMILES_CANONICAL CACTVS 3.341 O[C@@H]1Cc2c(cc3ccc4cccc5ccc2c3c45)[C@@H](O)[C@@H]1O
BAP SMILES CACTVS 3.341 O[CH]1Cc2c(cc3ccc4cccc5ccc2c3c45)[CH](O)[CH]1O
BAP SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 c1cc2ccc3cc4c(c5c3c2c(c1)cc5)C[C@H]([C@H]([C@@H]4O)O)O
BAP SMILES "OpenEye OEToolkits" 1.5.0 c1cc2ccc3cc4c(c5c3c2c(c1)cc5)CC(C(C4O)O)O
BAP InChI InChI 1.03 InChI=1S/C20H16O3/c21-16-9-14-13-7-6-11-3-1-2-10-4-5-12(18(13)17(10)11)8-15(14)19(22)20(16)23/h1-8,16,19-23H,9H2/t16-,19-,20-/m1/s1
BAP InChIKey InChI 1.03 GFANZDFKCCJYRF-NSISKUIASA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
BAP "SYSTEMATIC NAME" ACDLabs 10.04 (7R,8R,9R)-7,8,9,10-tetrahydrobenzo[pqr]tetraphene-7,8,9-triol
BAP "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 (7R,8R,9R)-7,8,9,10-tetrahydrobenzo[a]pyrene-7,8,9-triol
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
BAP 'Create component' 1999-07-08 RCSB
BAP 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id BAP
_pdbe_chem_comp_drugbank_details.drugbank_id DB07435
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name '1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE'
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number ?
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_synonyms.comp_id BAP
_pdbe_chem_comp_synonyms.name '1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE'
_pdbe_chem_comp_synonyms.provenance DrugBank
_pdbe_chem_comp_synonyms.type ?
#
_pdbe_chem_comp_drugbank_classification.comp_id BAP
_pdbe_chem_comp_drugbank_classification.drugbank_id DB07435
_pdbe_chem_comp_drugbank_classification.parent Pyrenes
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class Pyrenes
_pdbe_chem_comp_drugbank_classification.superclass Benzenoids
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as pyrenes. These are compounds containing a pyrene moiety, which consists four fused benzene rings, resulting in a flat aromatic system.'
#
loop_
_pdbe_chem_comp_drugbank_targets.comp_id
_pdbe_chem_comp_drugbank_targets.drugbank_id
_pdbe_chem_comp_drugbank_targets.name
_pdbe_chem_comp_drugbank_targets.organism
_pdbe_chem_comp_drugbank_targets.uniprot_id
_pdbe_chem_comp_drugbank_targets.pharmacologically_active
_pdbe_chem_comp_drugbank_targets.ordinal
BAP DB07435 'DNA polymerase kappa' Humans Q9UBT6 unknown 1
BAP DB07435 'DNA polymerase I' 'Geobacillus stearothermophilus' P52026 unknown 2
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
BAP C1 C 9.197 -5.152 1
BAP C2 C 7.876 -5.987 2
BAP C3 C 6.498 -5.251 3
BAP C3A C 6.459 -3.688 4
BAP C4 C 5.106 -2.907 5
BAP C5 C 5.118 -1.345 6
BAP C5A C 6.482 -0.585 7
BAP C6 C 6.482 0.915 8
BAP C7 C 7.782 1.665 9
BAP C8 C 9.081 0.915 10
BAP C8A C 9.081 -0.585 11
BAP C9 C 10.370 -1.327 12
BAP C10 C 10.390 -2.814 13
BAP C1A C 9.121 -3.591 14
BAP C3B C 7.806 -2.897 15
BAP C5B C 7.782 -1.335 16
BAP "C1'" C 7.806 3.228 17
BAP "O1'" O 9.113 3.963 18
BAP "C2'" C 6.459 4.019 19
BAP "O2'" O 6.464 5.519 20
BAP "C3'" C 5.106 3.238 21
BAP "O3'" O 3.804 3.983 22
BAP "C4'" C 5.118 1.676 23
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
BAP C1 C2 DOUBLE NONE 1
BAP C1 C1A SINGLE NONE 2
BAP C2 C3 SINGLE NONE 3
BAP C3 C3A DOUBLE NONE 4
BAP C3A C4 SINGLE NONE 5
BAP C3A C3B SINGLE NONE 6
BAP C4 C5 DOUBLE NONE 7
BAP C5 C5A SINGLE NONE 8
BAP C5A C6 DOUBLE NONE 9
BAP C5A C5B SINGLE NONE 10
BAP C6 C7 SINGLE NONE 11
BAP C6 "C4'" SINGLE NONE 12
BAP C7 C8 DOUBLE NONE 13
BAP C7 "C1'" SINGLE NONE 14
BAP C8 C8A SINGLE NONE 15
BAP C8A C9 DOUBLE NONE 16
BAP C8A C5B SINGLE NONE 17
BAP C9 C10 SINGLE NONE 18
BAP C10 C1A DOUBLE NONE 19
BAP C1A C3B SINGLE NONE 20
BAP C3B C5B DOUBLE NONE 21
BAP "C1'" "O1'" SINGLE BEGINDASH 22
BAP "C1'" "C2'" SINGLE NONE 23
BAP "C2'" "O2'" SINGLE BEGINWEDGE 24
BAP "C2'" "C3'" SINGLE NONE 25
BAP "C3'" "O3'" SINGLE BEGINWEDGE 26
BAP "C3'" "C4'" SINGLE NONE 27
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
BAP MurckoScaffold S1 scaffold c1cc2ccc3cc4c(c5ccc(c1)c2c35)CCCC4 InChI=1S/C20H16/c1-2-7-17-15(4-1)12-16-9-8-13-5-3-6-14-10-11-18(17)20(16)19(13)14/h3,5-6,8-12H,1-2,4,7H2 CTXOSVBTVTWJBN-UHFFFAOYSA-N
BAP napthalene F1 fragment c1ccc2ccccc2c1 InChI=1S/C10H8/c1-2-6-10-8-4-3-7-9(10)5-1/h1-8H UFWIBTONFRDIAS-UHFFFAOYSA-N
BAP phenanthrene F2 fragment c1ccc2c(c1)ccc1ccccc12 InChI=1S/C14H10/c1-3-7-13-11(5-1)9-10-12-6-2-4-8-14(12)13/h1-10H YNPNZTXNASCQKK-UHFFFAOYSA-N
BAP phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
BAP Z335245116 F4 fragment CC(O)c1ccc2ccccc2c1 InChI=1S/C12H12O/c1-9(13)11-7-6-10-4-2-3-5-12(10)8-11/h2-9,13H,1H3 AXRKCRWZRKETCK-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
BAP C1 S1 1
BAP C2 S1 1
BAP C3 S1 1
BAP C3A S1 1
BAP C4 S1 1
BAP C5 S1 1
BAP C5A S1 1
BAP C6 S1 1
BAP C7 S1 1
BAP C8 S1 1
BAP C8A S1 1
BAP C9 S1 1
BAP C10 S1 1
BAP C1A S1 1
BAP C3B S1 1
BAP C5B S1 1
BAP "C1'" S1 1
BAP "C2'" S1 1
BAP "C3'" S1 1
BAP "C4'" S1 1
BAP C1 F1 1
BAP C2 F1 1
BAP C3 F1 1
BAP C3A F1 1
BAP C3B F1 1
BAP C1A F1 1
BAP C5B F1 1
BAP C5A F1 1
BAP C5 F1 1
BAP C4 F1 1
BAP C2 F1 2
BAP C3 F1 2
BAP C3A F1 2
BAP C3B F1 2
BAP C1A F1 2
BAP C1 F1 2
BAP C10 F1 2
BAP C9 F1 2
BAP C8A F1 2
BAP C5B F1 2
BAP C3A F1 3
BAP C4 F1 3
BAP C5 F1 3
BAP C5A F1 3
BAP C5B F1 3
BAP C3B F1 3
BAP C8A F1 3
BAP C8 F1 3
BAP C7 F1 3
BAP C6 F1 3
BAP C4 F1 4
BAP C5 F1 4
BAP C5A F1 4
BAP C5B F1 4
BAP C3B F1 4
BAP C3A F1 4
BAP C1A F1 4
BAP C10 F1 4
BAP C9 F1 4
BAP C8A F1 4
BAP C6 F1 5
BAP C7 F1 5
BAP C8 F1 5
BAP C8A F1 5
BAP C5B F1 5
BAP C5A F1 5
BAP C3B F1 5
BAP C1A F1 5
BAP C10 F1 5
BAP C9 F1 5
BAP C2 F2 1
BAP C1 F2 1
BAP C1A F2 1
BAP C3B F2 1
BAP C3A F2 1
BAP C3 F2 1
BAP C4 F2 1
BAP C5 F2 1
BAP C5A F2 1
BAP C5B F2 1
BAP C8A F2 1
BAP C8 F2 1
BAP C7 F2 1
BAP C6 F2 1
BAP C2 F2 2
BAP C3 F2 2
BAP C3A F2 2
BAP C3B F2 2
BAP C1A F2 2
BAP C1 F2 2
BAP C10 F2 2
BAP C9 F2 2
BAP C8A F2 2
BAP C5B F2 2
BAP C5A F2 2
BAP C6 F2 2
BAP C7 F2 2
BAP C8 F2 2
BAP C1 F3 1
BAP C2 F3 1
BAP C3 F3 1
BAP C3A F3 1
BAP C3B F3 1
BAP C1A F3 1
BAP C3A F3 2
BAP C4 F3 2
BAP C5 F3 2
BAP C5A F3 2
BAP C5B F3 2
BAP C3B F3 2
BAP C5A F3 3
BAP C6 F3 3
BAP C7 F3 3
BAP C8 F3 3
BAP C8A F3 3
BAP C5B F3 3
BAP C8A F3 4
BAP C9 F3 4
BAP C10 F3 4
BAP C1A F3 4
BAP C3B F3 4
BAP C5B F3 4
BAP "C2'" F4 1
BAP "C1'" F4 1
BAP "O1'" F4 1
BAP C7 F4 1
BAP C6 F4 1
BAP C5A F4 1
BAP C5B F4 1
BAP C3B F4 1
BAP C1A F4 1
BAP C10 F4 1
BAP C9 F4 1
BAP C8A F4 1
BAP C8 F4 1
BAP "C2'" F4 2
BAP "C1'" F4 2
BAP "O1'" F4 2
BAP C7 F4 2
BAP C8 F4 2
BAP C8A F4 2
BAP C5B F4 2
BAP C3B F4 2
BAP C3A F4 2
BAP C4 F4 2
BAP C5 F4 2
BAP C5A F4 2
BAP C6 F4 2
#
_pdbe_chem_comp_rdkit_properties.comp_id BAP
_pdbe_chem_comp_rdkit_properties.exactmw 304.110
_pdbe_chem_comp_rdkit_properties.amw 304.345
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 3
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 3
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 3
_pdbe_chem_comp_rdkit_properties.NumHBD 3
_pdbe_chem_comp_rdkit_properties.NumHBA 3
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 23
_pdbe_chem_comp_rdkit_properties.NumAtoms 39
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 3
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.200
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 3
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 155.032
_pdbe_chem_comp_rdkit_properties.tpsa 60.690
_pdbe_chem_comp_rdkit_properties.CrippenClogP 1.501
_pdbe_chem_comp_rdkit_properties.CrippenMR 83.673
_pdbe_chem_comp_rdkit_properties.chi0v 11.225
_pdbe_chem_comp_rdkit_properties.chi1v 6.612
_pdbe_chem_comp_rdkit_properties.chi2v 3.878
_pdbe_chem_comp_rdkit_properties.chi3v 3.878
_pdbe_chem_comp_rdkit_properties.chi4v 2.870
_pdbe_chem_comp_rdkit_properties.chi0n 27.225
_pdbe_chem_comp_rdkit_properties.chi1n 14.337
_pdbe_chem_comp_rdkit_properties.chi2n 3.878
_pdbe_chem_comp_rdkit_properties.chi3n 3.878
_pdbe_chem_comp_rdkit_properties.chi4n 2.870
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.200
_pdbe_chem_comp_rdkit_properties.kappa1 4.899
_pdbe_chem_comp_rdkit_properties.kappa2 4.418
_pdbe_chem_comp_rdkit_properties.kappa3 1.643
_pdbe_chem_comp_rdkit_properties.Phi 0.941
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
BAP UniChem DrugBank DB07435
BAP UniChem PubChem 5287739
BAP UniChem 'Probes And Drugs' PD005187
BAP UniChem Nikkaji J1.148G
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
BAP C1 -4.977 0.271 0.376 ETKDGv3 1
BAP C2 -5.278 -0.913 -0.176 ETKDGv3 2
BAP C3 -4.224 -1.839 -0.657 ETKDGv3 3
BAP C3A -2.921 -1.528 -0.561 ETKDGv3 4
BAP C4 -1.872 -2.454 -1.031 ETKDGv3 5
BAP C5 -0.578 -2.125 -0.935 ETKDGv3 6
BAP C5A -0.152 -0.812 -0.358 ETKDGv3 7
BAP C6 1.153 -0.426 -0.280 ETKDGv3 8
BAP C7 1.531 0.856 0.426 ETKDGv3 9
BAP C8 0.583 1.710 0.858 ETKDGv3 10
BAP C8A -0.844 1.388 0.743 ETKDGv3 11
BAP C9 -1.796 2.230 1.182 ETKDGv3 12
BAP C10 -3.224 1.863 1.064 ETKDGv3 13
BAP C1A -3.569 0.685 0.519 ETKDGv3 14
BAP C3B -2.517 -0.239 0.037 ETKDGv3 15
BAP C5B -1.218 0.094 0.141 ETKDGv3 16
BAP "C1'" 2.984 1.274 0.586 ETKDGv3 17
BAP "O1'" 3.193 1.736 1.899 ETKDGv3 18
BAP "C2'" 3.974 0.128 0.301 ETKDGv3 19
BAP "O2'" 5.277 0.640 0.178 ETKDGv3 20
BAP "C3'" 3.611 -0.623 -0.984 ETKDGv3 21
BAP "O3'" 3.670 0.219 -2.113 ETKDGv3 22
BAP "C4'" 2.245 -1.315 -0.852 ETKDGv3 23
BAP H1 -5.775 0.920 0.716 ETKDGv3 24
BAP H2 -6.316 -1.205 -0.275 ETKDGv3 25
BAP H3 -4.527 -2.784 -1.092 ETKDGv3 26
BAP H4 -2.146 -3.415 -1.450 ETKDGv3 27
BAP H5 0.147 -2.853 -1.269 ETKDGv3 28
BAP H8 0.867 2.653 1.313 ETKDGv3 29
BAP H9 -1.531 3.180 1.629 ETKDGv3 30
BAP H10 -3.981 2.551 1.420 ETKDGv3 31
BAP "H1'" 3.169 2.101 -0.140 ETKDGv3 32
BAP HO1 3.930 2.400 1.861 ETKDGv3 33
BAP "H2'" 3.935 -0.603 1.144 ETKDGv3 34
BAP HO2 5.637 0.743 1.097 ETKDGv3 35
BAP "H3'" 4.369 -1.423 -1.133 ETKDGv3 36
BAP HO3 2.856 0.785 -2.127 ETKDGv3 37
BAP "H4'1" 2.354 -2.203 -0.191 ETKDGv3 38
BAP "H4'2" 1.959 -1.669 -1.866 ETKDGv3 39
#