data_AND
#
_chem_comp.id AND
_chem_comp.name 3-BETA-HYDROXY-5-ANDROSTEN-17-ONE
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C19 H28 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 288.424
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code AND
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1COY
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
AND C1 C1 C 0 1 N N N N N N -7.621 18.535 23.954 1.325 -0.869 -2.372 C1 AND 1
AND C2 C2 C 0 1 N N N N N N -8.236 17.632 24.993 1.345 -0.340 -3.807 C2 AND 2
AND C3 C3 C 0 1 N N S N N N -7.470 16.328 25.109 -0.065 -0.391 -4.395 C3 AND 3
AND O3 O3 O 0 1 N N N N N N -8.136 15.417 26.030 -0.026 0.021 -5.763 O3 AND 4
AND C4 C4 C 0 1 N N N N N N -6.010 16.557 25.523 -0.981 0.547 -3.605 C4 AND 5
AND C5 C5 C 0 1 N N N N N N -5.343 17.673 24.723 -0.911 0.161 -2.137 C5 AND 6
AND C6 C6 C 0 1 N N N N N N -4.045 17.560 24.399 -2.026 -0.039 -1.499 C6 AND 7
AND C7 C7 C 0 1 N N N N N N -3.273 18.495 23.475 -2.081 -0.431 -0.051 C7 AND 8
AND C8 C8 C 0 1 N N R N N N -4.014 19.799 23.165 -0.821 0.076 0.657 C8 AND 9
AND C9 C9 C 0 1 N N S N N N -5.530 19.604 23.064 0.402 -0.481 -0.081 C9 AND 10
AND C10 C10 C 0 1 N N R N N N -6.155 18.938 24.320 0.426 0.032 -1.511 C10 AND 11
AND C11 C11 C 0 1 N N N N N N -6.235 20.928 22.771 1.706 -0.112 0.620 C11 AND 12
AND C12 C12 C 0 1 N N N N N N -5.660 21.641 21.552 1.699 -0.541 2.096 C12 AND 13
AND C13 C13 C 0 1 N N S N N N -4.142 21.780 21.633 0.503 0.124 2.749 C13 AND 14
AND C14 C14 C 0 1 N N S N N N -3.528 20.398 21.878 -0.768 -0.467 2.086 C14 AND 15
AND C15 C15 C 0 1 N N N N N N -2.060 20.562 21.585 -1.873 0.032 3.026 C15 AND 16
AND C16 C16 C 0 1 N N N N N N -2.082 21.423 20.302 -1.229 -0.149 4.428 C16 AND 17
AND C17 C17 C 0 1 N N N N N N -3.419 22.179 20.354 0.292 -0.147 4.210 C17 AND 18
AND O17 O17 O 0 1 N N N N N N -3.795 22.939 19.463 1.146 -0.331 5.043 O17 AND 19
AND C18 C18 C 0 1 N N N N N N -3.731 22.882 22.676 0.557 1.633 2.508 C18 AND 20
AND C19 C19 C 0 1 N N N N N N -6.184 19.959 25.511 1.039 1.434 -1.491 C19 AND 21
AND H11 1H1 H 0 1 N N N N N N -7.672 18.077 22.938 0.922 -1.882 -2.363 H11 AND 22
AND H12 2H1 H 0 1 N N N N N N -8.254 19.434 23.774 2.340 -0.877 -1.973 H12 AND 23
AND H21 1H2 H 0 1 N N N N N N -8.325 18.143 25.979 2.012 -0.956 -4.411 H21 AND 24
AND H22 2H2 H 0 1 N N N N N N -9.318 17.455 24.793 1.702 0.689 -3.809 H22 AND 25
AND H3 H3 H 0 1 N N N N N N -7.456 15.858 24.097 -0.448 -1.410 -4.334 H3 AND 26
AND HO3 HO3 H 0 1 N N N N N N -7.656 14.600 26.102 -0.933 -0.025 -6.095 HO3 AND 27
AND H41 1H4 H 0 1 N N N N N N -5.928 16.745 26.618 -2.006 0.446 -3.962 H41 AND 28
AND H42 2H4 H 0 1 N N N N N N -5.422 15.611 25.459 -0.647 1.577 -3.730 H42 AND 29
AND H6 H6 H 0 1 N N N N N N -3.604 16.682 24.901 -2.956 0.081 -2.035 H6 AND 30
AND H71 1H7 H 0 1 N N N N N N -2.258 18.706 23.886 -2.132 -1.517 0.029 H71 AND 31
AND H72 2H7 H 0 1 N N N N N N -2.986 17.970 22.533 -2.963 0.010 0.412 H72 AND 32
AND H8 H8 H 0 1 N N N N N N -3.798 20.484 24.017 -0.800 1.166 0.653 H8 AND 33
AND H9 H9 H 0 1 N N N N N N -5.686 18.900 22.213 0.322 -1.567 -0.108 H9 AND 34
AND H111 1H11 H 0 0 N N N N N N -7.335 20.781 22.667 1.846 0.967 0.565 H111 AND 35
AND H112 2H11 H 0 0 N N N N N N -6.225 21.593 23.665 2.535 -0.603 0.111 H112 AND 36
AND H121 1H12 H 0 0 N N N N N N -5.970 21.138 20.606 2.618 -0.213 2.582 H121 AND 37
AND H122 2H12 H 0 0 N N N N N N -6.148 22.630 21.394 1.606 -1.624 2.167 H122 AND 38
AND H14 H14 H 0 1 N N N N N N -3.863 19.576 21.202 -0.737 -1.556 2.078 H14 AND 39
AND H151 1H15 H 0 0 N N N N N N -1.455 20.979 22.423 -2.097 1.082 2.836 H151 AND 40
AND H152 2H15 H 0 0 N N N N N N -1.485 19.609 21.504 -2.769 -0.579 2.930 H152 AND 41
AND H161 1H16 H 0 0 N N N N N N -1.192 22.085 20.187 -1.518 0.674 5.081 H161 AND 42
AND H162 2H16 H 0 0 N N N N N N -1.928 20.840 19.364 -1.542 -1.098 4.862 H162 AND 43
AND H181 1H18 H 0 0 N N N N N N -2.622 22.983 22.735 0.610 1.828 1.437 H181 AND 44
AND H182 2H18 H 0 0 N N N N N N -4.222 23.858 22.456 -0.339 2.099 2.917 H182 AND 45
AND H183 3H18 H 0 0 N N N N N N -4.179 22.687 23.677 1.438 2.049 2.997 H183 AND 46
AND H191 1H19 H 0 0 N N N N N N -5.138 20.246 25.772 1.095 1.821 -2.509 H191 AND 47
AND H192 2H19 H 0 0 N N N N N N -6.825 20.845 25.293 0.417 2.093 -0.885 H192 AND 48
AND H193 3H19 H 0 0 N N N N N N -6.748 19.568 26.390 2.041 1.386 -1.065 H193 AND 49
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
AND C1 C2 SING N N 1
AND C1 C10 SING N N 2
AND C1 H11 SING N N 3
AND C1 H12 SING N N 4
AND C2 C3 SING N N 5
AND C2 H21 SING N N 6
AND C2 H22 SING N N 7
AND C3 O3 SING N N 8
AND C3 C4 SING N N 9
AND C3 H3 SING N N 10
AND O3 HO3 SING N N 11
AND C4 C5 SING N N 12
AND C4 H41 SING N N 13
AND C4 H42 SING N N 14
AND C5 C6 DOUB N N 15
AND C5 C10 SING N N 16
AND C6 C7 SING N N 17
AND C6 H6 SING N N 18
AND C7 C8 SING N N 19
AND C7 H71 SING N N 20
AND C7 H72 SING N N 21
AND C8 C9 SING N N 22
AND C8 C14 SING N N 23
AND C8 H8 SING N N 24
AND C9 C10 SING N N 25
AND C9 C11 SING N N 26
AND C9 H9 SING N N 27
AND C10 C19 SING N N 28
AND C11 C12 SING N N 29
AND C11 H111 SING N N 30
AND C11 H112 SING N N 31
AND C12 C13 SING N N 32
AND C12 H121 SING N N 33
AND C12 H122 SING N N 34
AND C13 C14 SING N N 35
AND C13 C17 SING N N 36
AND C13 C18 SING N N 37
AND C14 C15 SING N N 38
AND C14 H14 SING N N 39
AND C15 C16 SING N N 40
AND C15 H151 SING N N 41
AND C15 H152 SING N N 42
AND C16 C17 SING N N 43
AND C16 H161 SING N N 44
AND C16 H162 SING N N 45
AND C17 O17 DOUB N N 46
AND C18 H181 SING N N 47
AND C18 H182 SING N N 48
AND C18 H183 SING N N 49
AND C19 H191 SING N N 50
AND C19 H192 SING N N 51
AND C19 H193 SING N N 52
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
AND SMILES ACDLabs 10.04 O=C3CCC4C1C(C2(C(=CC1)CC(O)CC2)C)CCC34C
AND SMILES_CANONICAL CACTVS 3.341 C[C@]12CC[C@H]3[C@@H](CC=C4C[C@@H](O)CC[C@]34C)[C@@H]1CCC2=O
AND SMILES CACTVS 3.341 C[C]12CC[CH]3[CH](CC=C4C[CH](O)CC[C]34C)[CH]1CCC2=O
AND SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 C[C@]12CC[C@H]3[C@H]([C@@H]1CCC2=O)CC=C4[C@@]3(CC[C@@H](C4)O)C
AND SMILES "OpenEye OEToolkits" 1.5.0 CC12CCC3C(C1CCC2=O)CC=C4C3(CCC(C4)O)C
AND InChI InChI 1.03 InChI=1S/C19H28O2/c1-18-9-7-13(20)11-12(18)3-4-14-15-5-6-17(21)19(15,2)10-8-16(14)18/h3,13-16,20H,4-11H2,1-2H3/t13-,14-,15-,16-,18-,19-/m0/s1
AND InChIKey InChI 1.03 FMGSKLZLMKYGDP-USOAJAOKSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
AND "SYSTEMATIC NAME" ACDLabs 10.04 (3alpha,8alpha)-3-hydroxyandrost-5-en-17-one
AND "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 (3S,8R,9S,10R,13S,14S)-3-hydroxy-10,13-dimethyl-1,2,3,4,7,8,9,11,12,14,15,16-dodecahydrocyclopenta[a]phenanthren-17-one
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
AND 'Create component' 1999-07-08 EBI
AND 'Modify descriptor' 2011-06-04 RCSB
#
_pdbe_chem_comp_drugbank_details.comp_id AND
_pdbe_chem_comp_drugbank_details.drugbank_id DB01708
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name Prasterone
_pdbe_chem_comp_drugbank_details.description
'Prasterone, also known as dehydroepiandrosterone (DHEA) is a major C19 steroid produced by the adrenal cortex. It is also produced in small quantities in the testis and the ovary. Dehydroepiandrosterone (DHEA) can be converted to testosterone; androstenedione; estradiol; and estrone. Most of DHEA is sulfated (dehydroepiandrosterone sulfate) before secretion.  In the United States, DHEA or DHEAS have been advertised with claims that they may be beneficial for a wide variety of ailments. DHEA and DHEAS are readily available in the United States, where they are marketed as over-the-counter dietary supplements. In November 2016, DHEA was approved (as Intrarosa) to treat women experiencing moderate to severe pain during sexual intercourse (dyspareunia), a symptom of vulvar and vaginal atrophy (VVA), due to menopause.  In Canada, a prescription is required to buy DHEA.'
_pdbe_chem_comp_drugbank_details.cas_number 53-43-0
_pdbe_chem_comp_drugbank_details.mechanism_of_action
'DHEA can be understood as a prohormone for the sex steroids. DHEAS may be viewed as buffer and reservoir. As most DHEA is produced by the zona reticularis of the adrenal cortex, it is argued that there is a role in the immune and stress response. DHEAS/DHEA are useful to detect excess adrenal activity as seen in adrenal cancer or hyperplasia, including certain forms of congenital adrenal hyperplasia as it is produced nearly entirely by the adrenal glands. Women with polycystic ovary syndrome tend to have elevated levels of DHEAS.'
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
AND 3-beta-hydroxy-5-androsten-17-one DrugBank ?
AND 3beta-hydroxyandrost-5-en-17-one DrugBank ?
AND '3β-hydroxyandrost-5-en-17-one' DrugBank ?
AND Dehydroandrosterone DrugBank ?
AND Dehydroepiandrosterone DrugBank ?
AND Dehydroisoandrosterone DrugBank ?
AND DHEA DrugBank ?
AND Prasterone DrugBank ?
AND Biolaif DrugBank 'International brand'
AND Fidelin DrugBank 'International brand'
AND OVIGYN-D DrugBank 'International brand'
#
_pdbe_chem_comp_drugbank_classification.comp_id AND
_pdbe_chem_comp_drugbank_classification.drugbank_id DB01708
_pdbe_chem_comp_drugbank_classification.parent 'Androgens and derivatives'
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Steroids and steroid derivatives'
_pdbe_chem_comp_drugbank_classification.superclass 'Lipids and lipid-like molecules'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as androgens and derivatives. These are 3-hydroxylated C19 steroid hormones. They are known to favor the development of masculine characteristics. They also show profound effects on scalp and body hair in humans.'
#
loop_
_pdbe_chem_comp_drugbank_targets.comp_id
_pdbe_chem_comp_drugbank_targets.drugbank_id
_pdbe_chem_comp_drugbank_targets.name
_pdbe_chem_comp_drugbank_targets.organism
_pdbe_chem_comp_drugbank_targets.uniprot_id
_pdbe_chem_comp_drugbank_targets.pharmacologically_active
_pdbe_chem_comp_drugbank_targets.ordinal
AND DB01708 'Glucose-6-phosphate 1-dehydrogenase' Humans P11413 unknown 1
AND DB01708 'Estrogen receptor' Humans P03372 unknown 2
AND DB01708 'Estrogen receptor beta' Humans Q92731 unknown 3
AND DB01708 'Gamma-aminobutyric acid receptor subunit alpha-1' Humans P14867 unknown 4
AND DB01708 'Gamma-aminobutyric acid receptor subunit alpha-2' Humans P47869 unknown 5
AND DB01708 'Gamma-aminobutyric acid receptor subunit alpha-3' Humans P34903 unknown 6
AND DB01708 'Gamma-aminobutyric acid receptor subunit alpha-4' Humans P48169 unknown 7
AND DB01708 'Gamma-aminobutyric acid receptor subunit alpha-5' Humans P31644 unknown 8
AND DB01708 'Gamma-aminobutyric acid receptor subunit alpha-6' Humans Q16445 unknown 9
AND DB01708 'Gamma-aminobutyric acid receptor subunit beta-1' Humans P18505 unknown 10
AND DB01708 'Gamma-aminobutyric acid receptor subunit beta-2' Humans P47870 unknown 11
AND DB01708 'Gamma-aminobutyric acid receptor subunit beta-3' Humans P28472 unknown 12
AND DB01708 'Gamma-aminobutyric acid receptor subunit delta' Humans O14764 unknown 13
AND DB01708 'Gamma-aminobutyric acid receptor subunit epsilon' Humans P78334 unknown 14
AND DB01708 'Gamma-aminobutyric acid receptor subunit gamma-1' Humans Q8N1C3 unknown 15
AND DB01708 'Gamma-aminobutyric acid receptor subunit gamma-2' Humans P18507 unknown 16
AND DB01708 'Gamma-aminobutyric acid receptor subunit gamma-3' Humans Q99928 unknown 17
AND DB01708 'Gamma-aminobutyric acid receptor subunit pi' Humans O00591 unknown 18
AND DB01708 'Gamma-aminobutyric acid receptor subunit theta' Humans Q9UN88 unknown 19
AND DB01708 'Glutamate receptor ionotropic, NMDA 1' Humans Q05586 unknown 20
AND DB01708 'Glutamate receptor ionotropic, NMDA 2A' Humans Q12879 unknown 21
AND DB01708 'Glutamate receptor ionotropic, NMDA 2B' Humans Q13224 unknown 22
AND DB01708 'Glutamate receptor ionotropic, NMDA 2C' Humans Q14957 unknown 23
AND DB01708 'Glutamate receptor ionotropic, NMDA 2D' Humans O15399 unknown 24
AND DB01708 'Glutamate receptor ionotropic, NMDA 3A' Humans Q8TCU5 unknown 25
AND DB01708 'Glutamate receptor ionotropic, NMDA 3B' Humans O60391 unknown 26
AND DB01708 'Androgen receptor' Humans P10275 unknown 27
AND DB01708 'Peroxisome proliferator-activated receptor alpha' Humans Q07869 unknown 28
AND DB01708 'Sigma non-opioid intracellular receptor 1' Humans Q99720 unknown 29
AND DB01708 'Nuclear receptor subfamily 1 group I member 2' Humans O75469 unknown 30
AND DB01708 'Nuclear receptor subfamily 1 group I member 3' Humans Q14994 unknown 31
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
AND C1 C 6.540 -0.032 1
AND C2 C 5.118 -0.824 2
AND C3 C 5.106 -2.451 3
AND O3 O 3.804 -3.196 4
AND C4 C 6.515 -3.265 5
AND C5 C 7.918 -2.441 6
AND C6 C 9.271 -3.222 7
AND C7 C 10.618 -2.430 8
AND C8 C 10.594 -0.868 9
AND C9 C 9.295 -0.118 10
AND C10 C 7.930 -0.878 11
AND C11 C 9.295 1.382 12
AND C12 C 10.594 2.132 13
AND C13 C 11.893 1.382 14
AND C14 C 11.893 -0.118 15
AND C15 C 13.312 -0.575 16
AND C16 C 14.188 0.632 17
AND C17 C 13.312 1.839 18
AND O17 O 13.779 3.265 19
AND C18 C 11.893 2.882 20
AND C19 C 7.942 0.622 21
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
AND C1 C2 SINGLE NONE 1
AND C1 C10 SINGLE NONE 2
AND C2 C3 SINGLE NONE 3
AND C3 O3 SINGLE BEGINWEDGE 4
AND C3 C4 SINGLE NONE 5
AND C4 C5 SINGLE NONE 6
AND C5 C6 DOUBLE NONE 7
AND C5 C10 SINGLE NONE 8
AND C6 C7 SINGLE NONE 9
AND C7 C8 SINGLE NONE 10
AND C8 C9 SINGLE NONE 11
AND C8 C14 SINGLE NONE 12
AND C9 C10 SINGLE NONE 13
AND C9 C11 SINGLE NONE 14
AND C10 C19 SINGLE BEGINWEDGE 15
AND C11 C12 SINGLE NONE 16
AND C12 C13 SINGLE NONE 17
AND C13 C14 SINGLE NONE 18
AND C13 C17 SINGLE NONE 19
AND C13 C18 SINGLE BEGINWEDGE 20
AND C14 C15 SINGLE NONE 21
AND C15 C16 SINGLE NONE 22
AND C16 C17 SINGLE NONE 23
AND C17 O17 DOUBLE NONE 24
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
AND MurckoScaffold S1 scaffold 'O=C1CC[C@@H]2C1CC[C@@H]1C3CCCCC3=CC[C@@H]21' InChI=1S/C17H24O/c18-17-10-9-15-14-6-5-11-3-1-2-4-12(11)13(14)7-8-16(15)17/h5,12-16H,1-4,6-10H2/t12-,13+,14+,15-,16-/m0/s1 WEMNDRSLPDMESM-OTJKEOIZSA-N
AND cyclohexane F1 fragment C1CCCCC1 InChI=1S/C6H12/c1-2-4-6-5-3-1/h1-6H2 XDTMQSROBMDMFD-UHFFFAOYSA-N
AND cyclopentane F2 fragment C1CCCC1 InChI=1S/C5H10/c1-2-4-5-3-1/h1-5H2 RGSFGYAAUTVSQA-UHFFFAOYSA-N
AND steroid-like F3 fragment C1~C~C~C2~C(~C~1)~C~C~C1~C3~C~C~C~C~3~C~C~C~2~1 ? ?
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
AND C1 S1 1
AND C2 S1 1
AND C3 S1 1
AND C4 S1 1
AND C5 S1 1
AND C6 S1 1
AND C7 S1 1
AND C8 S1 1
AND C9 S1 1
AND C10 S1 1
AND C11 S1 1
AND C12 S1 1
AND C13 S1 1
AND C14 S1 1
AND C15 S1 1
AND C16 S1 1
AND C17 S1 1
AND O17 S1 1
AND C1 F1 1
AND C2 F1 1
AND C3 F1 1
AND C4 F1 1
AND C5 F1 1
AND C10 F1 1
AND C8 F1 2
AND C9 F1 2
AND C11 F1 2
AND C12 F1 2
AND C13 F1 2
AND C14 F1 2
AND C13 F2 1
AND C14 F2 1
AND C15 F2 1
AND C16 F2 1
AND C17 F2 1
AND C2 F3 1
AND C3 F3 1
AND C4 F3 1
AND C5 F3 1
AND C10 F3 1
AND C1 F3 1
AND C9 F3 1
AND C8 F3 1
AND C7 F3 1
AND C6 F3 1
AND C14 F3 1
AND C13 F3 1
AND C12 F3 1
AND C11 F3 1
AND C17 F3 1
AND C16 F3 1
AND C15 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id AND
_pdbe_chem_comp_rdkit_properties.exactmw 288.209
_pdbe_chem_comp_rdkit_properties.amw 288.431
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 2
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 1
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 3
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 2
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 21
_pdbe_chem_comp_rdkit_properties.NumAtoms 49
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 2
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.842
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 4
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 3
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 6
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 166.977
_pdbe_chem_comp_rdkit_properties.tpsa 37.300
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.879
_pdbe_chem_comp_rdkit_properties.CrippenMR 82.717
_pdbe_chem_comp_rdkit_properties.chi0v 10.316
_pdbe_chem_comp_rdkit_properties.chi1v 5.908
_pdbe_chem_comp_rdkit_properties.chi2v 3.556
_pdbe_chem_comp_rdkit_properties.chi3v 3.556
_pdbe_chem_comp_rdkit_properties.chi4v 2.429
_pdbe_chem_comp_rdkit_properties.chi0n 38.316
_pdbe_chem_comp_rdkit_properties.chi1n 19.816
_pdbe_chem_comp_rdkit_properties.chi2n 3.556
_pdbe_chem_comp_rdkit_properties.chi3n 3.556
_pdbe_chem_comp_rdkit_properties.chi4n 2.429
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.630
_pdbe_chem_comp_rdkit_properties.kappa1 2.896
_pdbe_chem_comp_rdkit_properties.kappa2 4.440
_pdbe_chem_comp_rdkit_properties.kappa3 1.776
_pdbe_chem_comp_rdkit_properties.Phi 0.612
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
AND UniChem DrugBank DB01708
AND UniChem 'Guide to Pharmacology' 2370
AND UniChem 'PubChem DOTF' 12014907
AND UniChem 'KEGG LIGAND' C01227
AND UniChem ChEBI 28689
AND UniChem NIH SAM001246922
AND UniChem ZINC ZINC000003807917
AND UniChem eMolecules 29549852
AND UniChem eMolecules 35862385
AND UniChem fdasrs 459AG36T1B
AND UniChem PharmGKB PA451993
AND UniChem HMDB HMDB0000077
AND UniChem Selleck Dehydroepiandrosterone(DHEA)
AND UniChem 'PubChem TPHARMA' 14775640
AND UniChem PubChem 5881
AND UniChem NMRShiftDB 60021119
AND UniChem ACTor 105597-37-3
AND UniChem ACTor 53-43-0
AND UniChem Recon dhea
AND UniChem BindingDb 50223368
AND UniChem 'EPA CompTox Dashboard' DTXSID4020379
AND UniChem LipidMaps LMST02020021
AND UniChem DrugCentral 795
AND UniChem MetaboLights MTBLC28689
AND UniChem BRENDA 114949
AND UniChem BRENDA 114950
AND UniChem BRENDA 11888
AND UniChem BRENDA 123727
AND UniChem BRENDA 145360
AND UniChem BRENDA 15722
AND UniChem BRENDA 194807
AND UniChem BRENDA 19993
AND UniChem BRENDA 227852
AND UniChem BRENDA 257283
AND UniChem BRENDA 275
AND UniChem BRENDA 32591
AND UniChem BRENDA 43769
AND UniChem BRENDA 44017
AND UniChem BRENDA 4633
AND UniChem BRENDA 56467
AND UniChem BRENDA 8089
AND UniChem BRENDA 8270
AND UniChem BRENDA 8810
AND UniChem BRENDA 9047
AND UniChem Rhea 28689
AND UniChem ChemicalBook CB1475670
AND UniChem SwissLipids SLM:000390142
AND UniChem eMolecules 496736
AND UniChem SureChEMBL SCHEMBL24156
AND UniChem 'PubChem TPHARMA' 14751238
AND UniChem Nikkaji J4.147E
AND UniChem DailyMed PRASTERONE
AND UniChem ClinicalTrials DEHYDROEPIANDROSTERONE
AND UniChem ClinicalTrials INTRAROSA
AND UniChem ClinicalTrials PRASTERONE
AND UniChem ClinicalTrials VAGINORM
AND UniChem rxnorm INTRAROSA
AND UniChem rxnorm PRASTERONE
AND UniChem MedChemExpress HY-14650
AND UniChem 'Probes And Drugs' PD003033
AND UniChem CCDC ZOYMOP
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
AND C1 2.392 -0.423 1.478 ETKDGv3 1
AND C2 3.904 -0.239 1.281 ETKDGv3 2
AND C3 4.355 -0.828 -0.063 ETKDGv3 3
AND O3 5.745 -0.693 -0.223 ETKDGv3 4
AND C4 3.609 -0.172 -1.232 ETKDGv3 5
AND C5 2.108 -0.245 -1.020 ETKDGv3 6
AND C6 1.324 -0.543 -2.081 ETKDGv3 7
AND C7 -0.161 -0.753 -1.990 ETKDGv3 8
AND C8 -0.792 -0.017 -0.800 ETKDGv3 9
AND C9 0.042 -0.307 0.490 ETKDGv3 10
AND C10 1.528 0.198 0.336 ETKDGv3 11
AND C11 -0.665 0.168 1.809 ETKDGv3 12
AND C12 -2.167 -0.207 1.893 ETKDGv3 13
AND C13 -2.901 0.220 0.609 ETKDGv3 14
AND C14 -2.232 -0.505 -0.564 ETKDGv3 15
AND C15 -3.259 -0.471 -1.698 ETKDGv3 16
AND C16 -4.597 -0.677 -0.967 ETKDGv3 17
AND C17 -4.298 -0.280 0.447 ETKDGv3 18
AND O17 -5.125 -0.305 1.346 ETKDGv3 19
AND C18 -2.955 1.768 0.479 ETKDGv3 20
AND C19 1.611 1.748 0.414 ETKDGv3 21
AND H11 2.190 -1.515 1.554 ETKDGv3 22
AND H12 2.119 0.026 2.457 ETKDGv3 23
AND H21 4.439 -0.762 2.104 ETKDGv3 24
AND H22 4.172 0.837 1.344 ETKDGv3 25
AND H3 4.121 -1.916 -0.066 ETKDGv3 26
AND HO3 5.957 0.278 -0.212 ETKDGv3 27
AND H41 3.913 0.891 -1.337 ETKDGv3 28
AND H42 3.910 -0.693 -2.168 ETKDGv3 29
AND H6 1.785 -0.784 -3.036 ETKDGv3 30
AND H71 -0.628 -0.399 -2.934 ETKDGv3 31
AND H72 -0.343 -1.847 -1.908 ETKDGv3 32
AND H8 -0.803 1.064 -1.042 ETKDGv3 33
AND H9 0.089 -1.418 0.575 ETKDGv3 34
AND H111 -0.576 1.262 1.937 ETKDGv3 35
AND H112 -0.160 -0.294 2.683 ETKDGv3 36
AND H121 -2.262 -1.305 2.045 ETKDGv3 37
AND H122 -2.623 0.289 2.778 ETKDGv3 38
AND H14 -2.149 -1.590 -0.301 ETKDGv3 39
AND H151 -3.077 -1.281 -2.437 ETKDGv3 40
AND H152 -3.239 0.512 -2.215 ETKDGv3 41
AND H161 -5.393 -0.035 -1.400 ETKDGv3 42
AND H162 -4.900 -1.746 -0.999 ETKDGv3 43
AND H181 -1.953 2.238 0.476 ETKDGv3 44
AND H182 -3.469 2.081 -0.455 ETKDGv3 45
AND H183 -3.520 2.198 1.334 ETKDGv3 46
AND H191 1.395 2.118 1.436 ETKDGv3 47
AND H192 0.914 2.235 -0.296 ETKDGv3 48
AND H193 2.627 2.114 0.162 ETKDGv3 49
#