data_AI1
#
_chem_comp.id AI1
_chem_comp.name N-BENZYL-3-(ALPHA-D-GALACTOS-1-YL)-BENZAMIDE
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C20 H23 N O7"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms
;N-BENZYL-3-(3,4,5-TRIHYDROXY-6-HYDROXYMETHYL-TETRAHYDRO-PYRAN-2-YLOXY)-BENZAMIDE; BMSC001;
3-BENZYLAMINOCARBONYLPHENYL-ALPHA-D-GALACTOSIDE; BAPG
;
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2000-07-20
_chem_comp.pdbx_modified_date 2020-06-17
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 389.399
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code AI1
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1FD7
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
AI1 C1 C1 C 0 1 N N R N N N 23.163 17.998 34.649 -0.591 0.940 -3.327 C1 AI1 1
AI1 O1 O1 O 0 1 N N N N N N 24.148 18.063 33.579 -1.075 -0.030 -2.397 O1 AI1 2
AI1 C2 C2 C 0 1 N N R N N N 23.719 17.206 35.878 -1.129 0.617 -4.723 C2 AI1 3
AI1 O2 O2 O 0 1 N N N N N N 24.999 17.789 36.219 -2.557 0.672 -4.710 O2 AI1 4
AI1 C3 C3 C 0 1 N N S N N N 24.047 15.815 35.269 -0.671 -0.790 -5.121 C3 AI1 5
AI1 O3 O3 O 0 1 N N N N N N 24.335 15.032 36.437 -1.039 -1.048 -6.478 O3 AI1 6
AI1 C4 C4 C 0 1 N N R N N N 22.700 15.205 34.728 0.852 -0.869 -4.974 C4 AI1 7
AI1 O4 O4 O 0 1 N N N N N N 21.711 15.069 35.735 1.470 -0.005 -5.929 O4 AI1 8
AI1 C5 C5 C 0 1 N N R N N N 22.198 16.112 33.579 1.239 -0.435 -3.558 C5 AI1 9
AI1 O5 O5 O 0 1 N N N N N N 21.926 17.417 34.185 0.834 0.914 -3.341 O5 AI1 10
AI1 C6 C6 C 0 1 N N N N N N 20.862 15.645 32.946 2.756 -0.545 -3.390 C6 AI1 11
AI1 O6 O6 O 0 1 N N N N N N 20.464 16.585 31.978 3.118 -0.143 -2.068 O6 AI1 12
AI1 "C1'" "C1'" C 0 1 Y N N N N N 23.871 19.003 32.522 -0.702 0.390 -1.160 "C1'" AI1 13
AI1 "C2'" "C2'" C 0 1 Y N N N N N 22.663 19.727 32.554 -0.082 1.623 -1.004 "C2'" AI1 14
AI1 "C3'" "C3'" C 0 1 Y N N N N N 22.449 20.623 31.503 0.299 2.057 0.251 "C3'" AI1 15
AI1 "C4'" "C4'" C 0 1 Y N N N N N 23.471 20.727 30.508 0.066 1.267 1.359 "C4'" AI1 16
AI1 "C5'" "C5'" C 0 1 Y N N N N N 24.676 19.983 30.501 -0.555 0.026 1.212 "C5'" AI1 17
AI1 "C6'" "C6'" C 0 1 Y N N N N N 24.890 19.061 31.581 -0.945 -0.407 -0.055 "C6'" AI1 18
AI1 "C7'" "C7'" C 0 1 N N N N N N 25.677 20.064 29.505 -0.806 -0.822 2.396 "C7'" AI1 19
AI1 "O1'" "O1'" O 0 1 N N N N N N 26.875 19.809 29.894 -1.348 -1.902 2.266 "O1'" AI1 20
AI1 "N1'" "N1'" N 0 1 N N N N N N 25.535 20.384 28.293 -0.433 -0.398 3.620 "N1'" AI1 21
AI1 C1B C1* C 0 1 N N N N N N 26.650 20.383 27.306 -0.682 -1.239 4.794 C1B AI1 22
AI1 C2B C2* C 0 1 Y N N N N N 27.186 21.829 27.224 -0.174 -0.541 6.029 C2B AI1 23
AI1 C3B C3* C 0 1 Y N N N N N 28.193 22.110 26.330 -1.010 0.298 6.741 C3B AI1 24
AI1 C4B C4* C 0 1 Y N N N N N 28.632 23.505 26.310 -0.544 0.939 7.874 C4B AI1 25
AI1 C5B C5* C 0 1 Y N N N N N 28.089 24.431 27.164 0.756 0.740 8.295 C5B AI1 26
AI1 C6B C6* C 0 1 Y N N N N N 27.089 24.030 28.052 1.592 -0.100 7.583 C6B AI1 27
AI1 C7B C7* C 0 1 Y N N N N N 26.638 22.746 28.087 1.125 -0.744 6.453 C7B AI1 28
AI1 H1 H1 H 0 1 N N N N N N 22.951 19.042 34.976 -0.933 1.931 -3.028 H1 AI1 29
AI1 H2 H2 H 0 1 N N N N N N 23.030 17.193 36.754 -0.742 1.342 -5.440 H2 AI1 30
AI1 HO2 HO2 H 0 1 N N N N N N 25.336 17.308 36.965 -2.799 1.571 -4.449 HO2 AI1 31
AI1 H3 H3 H 0 1 N N N N N N 24.836 15.849 34.482 -1.142 -1.525 -4.468 H3 AI1 32
AI1 HO3 HO3 H 0 1 N N N N N N 24.535 14.181 36.064 -2.002 -0.975 -6.525 HO3 AI1 33
AI1 H4 H4 H 0 1 N N N N N N 22.896 14.170 34.361 1.181 -1.894 -5.143 H4 AI1 34
AI1 HO4 HO4 H 0 1 N N N N N N 20.898 14.701 35.408 1.193 -0.311 -6.804 HO4 AI1 35
AI1 H5 H5 H 0 1 N N N N N N 22.972 16.107 32.777 0.746 -1.083 -2.833 H5 AI1 36
AI1 HC61 1HC6 H 0 0 N N N N N N 20.925 14.610 32.534 3.249 0.102 -4.115 HC61 AI1 37
AI1 HC62 2HC6 H 0 0 N N N N N N 20.071 15.460 33.709 3.066 -1.577 -3.554 HC62 AI1 38
AI1 HO6 HO6 H 0 1 N N N N N N 19.645 16.298 31.590 4.080 -0.226 -2.004 HO6 AI1 39
AI1 "H2'" "H2'" H 0 1 N N N N N N 21.922 19.598 33.361 0.102 2.245 -1.867 "H2'" AI1 40
AI1 "H3'" "H3'" H 0 1 N N N N N N 21.521 21.217 31.461 0.781 3.016 0.366 "H3'" AI1 41
AI1 "H4'" "H4'" H 0 1 N N N N N N 23.317 21.438 29.679 0.366 1.608 2.338 "H4'" AI1 42
AI1 "H6'" "H6'" H 0 1 N N N N N N 25.789 18.430 31.682 -1.427 -1.365 -0.174 "H6'" AI1 43
AI1 "HN'1" "1HN'" H 0 0 N N N N N N 24.561 20.632 28.118 -0.000 0.463 3.724 "HN'1" AI1 44
AI1 "H1'1" 1H1* H 0 0 N N N N N N 27.442 19.635 27.542 -1.752 -1.419 4.892 "H1'1" AI1 45
AI1 "H1'2" 2H1* H 0 0 N N N N N N 26.355 19.969 26.313 -0.163 -2.190 4.675 "H1'2" AI1 46
AI1 H3B H3* H 0 1 N N N N N N 28.603 21.304 25.698 -2.027 0.453 6.412 H3B AI1 47
AI1 H4B H4* H 0 1 N N N N N N 29.408 23.875 25.619 -1.197 1.595 8.430 H4B AI1 48
AI1 "H5'" H5* H 0 1 N N N N N N 28.448 25.473 27.137 1.120 1.241 9.180 "H5'" AI1 49
AI1 H6B H6* H 0 1 N N N N N N 26.638 24.754 28.751 2.609 -0.255 7.912 H6B AI1 50
AI1 "H7'" H7* H 0 1 N N N N N N 25.846 22.455 28.798 1.778 -1.400 5.897 "H7'" AI1 51
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
AI1 C1 O1 SING N N 1
AI1 C1 C2 SING N N 2
AI1 C1 O5 SING N N 3
AI1 C1 H1 SING N N 4
AI1 O1 "C1'" SING N N 5
AI1 C2 O2 SING N N 6
AI1 C2 C3 SING N N 7
AI1 C2 H2 SING N N 8
AI1 O2 HO2 SING N N 9
AI1 C3 O3 SING N N 10
AI1 C3 C4 SING N N 11
AI1 C3 H3 SING N N 12
AI1 O3 HO3 SING N N 13
AI1 C4 O4 SING N N 14
AI1 C4 C5 SING N N 15
AI1 C4 H4 SING N N 16
AI1 O4 HO4 SING N N 17
AI1 C5 O5 SING N N 18
AI1 C5 C6 SING N N 19
AI1 C5 H5 SING N N 20
AI1 C6 O6 SING N N 21
AI1 C6 HC61 SING N N 22
AI1 C6 HC62 SING N N 23
AI1 O6 HO6 SING N N 24
AI1 "C1'" "C2'" DOUB Y N 25
AI1 "C1'" "C6'" SING Y N 26
AI1 "C2'" "C3'" SING Y N 27
AI1 "C2'" "H2'" SING N N 28
AI1 "C3'" "C4'" DOUB Y N 29
AI1 "C3'" "H3'" SING N N 30
AI1 "C4'" "C5'" SING Y N 31
AI1 "C4'" "H4'" SING N N 32
AI1 "C5'" "C6'" DOUB Y N 33
AI1 "C5'" "C7'" SING N N 34
AI1 "C6'" "H6'" SING N N 35
AI1 "C7'" "O1'" DOUB N N 36
AI1 "C7'" "N1'" SING N N 37
AI1 "N1'" C1B SING N N 38
AI1 "N1'" "HN'1" SING N N 39
AI1 C1B C2B SING N N 40
AI1 C1B "H1'1" SING N N 41
AI1 C1B "H1'2" SING N N 42
AI1 C2B C3B DOUB Y N 43
AI1 C2B C7B SING Y N 44
AI1 C3B C4B SING Y N 45
AI1 C3B H3B SING N N 46
AI1 C4B C5B DOUB Y N 47
AI1 C4B H4B SING N N 48
AI1 C5B C6B SING Y N 49
AI1 C5B "H5'" SING N N 50
AI1 C6B C7B DOUB Y N 51
AI1 C6B H6B SING N N 52
AI1 C7B "H7'" SING N N 53
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
AI1 SMILES ACDLabs 10.04 O=C(NCc1ccccc1)c3cc(OC2OC(C(O)C(O)C2O)CO)ccc3
AI1 SMILES_CANONICAL CACTVS 3.341 OC[C@H]1O[C@H](Oc2cccc(c2)C(=O)NCc3ccccc3)[C@H](O)[C@@H](O)[C@H]1O
AI1 SMILES CACTVS 3.341 OC[CH]1O[CH](Oc2cccc(c2)C(=O)NCc3ccccc3)[CH](O)[CH](O)[CH]1O
AI1 SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 c1ccc(cc1)CNC(=O)c2cccc(c2)O[C@@H]3[C@@H]([C@H]([C@H]([C@H](O3)CO)O)O)O
AI1 SMILES "OpenEye OEToolkits" 1.5.0 c1ccc(cc1)CNC(=O)c2cccc(c2)OC3C(C(C(C(O3)CO)O)O)O
AI1 InChI InChI 1.03 InChI=1S/C20H23NO7/c22-11-15-16(23)17(24)18(25)20(28-15)27-14-8-4-7-13(9-14)19(26)21-10-12-5-2-1-3-6-12/h1-9,15-18,20,22-25H,10-11H2,(H,21,26)/t15-,16+,17+,18-,20+/m1/s1
AI1 InChIKey InChI 1.03 FSMWGHKWKYCPKE-QTVCLEQKSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
AI1 "SYSTEMATIC NAME" ACDLabs 10.04 N-benzyl-3-(alpha-D-galactopyranosyloxy)benzamide
AI1 "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 N-(phenylmethyl)-3-[(2R,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxy-benzamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
AI1 'Create component' 2000-07-20 RCSB
AI1 'Modify descriptor' 2011-06-04 RCSB
AI1 'Modify synonyms' 2020-06-05 PDBE
#
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1 AI1 N-BENZYL-3-(3,4,5-TRIHYDROXY-6-HYDROXYMETHYL-TETRAHYDRO-PYRAN-2-YLOXY)-BENZAMIDE ? ?
2 AI1 BMSC001 ? ?
3 AI1 3-BENZYLAMINOCARBONYLPHENYL-ALPHA-D-GALACTOSIDE ? ?
4 AI1 BAPG ? ?
#
_pdbe_chem_comp_drugbank_details.comp_id AI1
_pdbe_chem_comp_drugbank_details.drugbank_id DB03446
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name N-Benzyl-3-(alpha-D-galactopyranosyloxy)benzamide
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number ?
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
loop_
_pdbe_chem_comp_synonyms.comp_id
_pdbe_chem_comp_synonyms.name
_pdbe_chem_comp_synonyms.provenance
_pdbe_chem_comp_synonyms.type
AI1 N-BENZYL-3-(3,4,5-TRIHYDROXY-6-HYDROXYMETHYL-TETRAHYDRO-PYRAN-2-YLOXY)-BENZAMIDE wwPDB ?
AI1 BMSC001 wwPDB ?
AI1 3-BENZYLAMINOCARBONYLPHENYL-ALPHA-D-GALACTOSIDE wwPDB ?
AI1 BAPG wwPDB ?
AI1 BAPG DrugBank ?
AI1 N-Benzyl-3-(alpha-D-galactopyranosyloxy)benzamide DrugBank ?
AI1 'N-Benzyl-3-(α-D-galactopyranosyloxy)benzamide' DrugBank ?
#
_pdbe_chem_comp_drugbank_classification.comp_id AI1
_pdbe_chem_comp_drugbank_classification.drugbank_id DB03446
_pdbe_chem_comp_drugbank_classification.parent N-benzylbenzamides
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Benzene and substituted derivatives'
_pdbe_chem_comp_drugbank_classification.superclass Benzenoids
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as n-benzylbenzamides. These are compounds containing a benzamide moiety that is N-linked to a benzyl group.'
#
_pdbe_chem_comp_drugbank_targets.comp_id AI1
_pdbe_chem_comp_drugbank_targets.drugbank_id DB03446
_pdbe_chem_comp_drugbank_targets.name 'Heat-labile enterotoxin B chain'
_pdbe_chem_comp_drugbank_targets.organism 'Escherichia coli'
_pdbe_chem_comp_drugbank_targets.uniprot_id P32890
_pdbe_chem_comp_drugbank_targets.pharmacologically_active unknown
_pdbe_chem_comp_drugbank_targets.ordinal 1
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
AI1 C1 C 7.702 -3.893 1
AI1 O1 O 9.002 -3.143 2
AI1 C2 C 7.702 -5.393 3
AI1 O2 O 9.002 -6.143 4
AI1 C3 C 6.404 -6.143 5
AI1 O3 O 6.404 -7.643 6
AI1 C4 C 5.104 -5.393 7
AI1 O4 O 3.805 -6.143 8
AI1 C5 C 5.104 -3.893 9
AI1 O5 O 6.404 -3.143 10
AI1 C6 C 3.805 -3.143 11
AI1 O6 O 3.805 -1.643 12
AI1 "C1'" C 9.002 -1.643 13
AI1 "C2'" C 10.301 -0.892 14
AI1 "C3'" C 10.301 0.608 15
AI1 "C4'" C 9.002 1.357 16
AI1 "C5'" C 7.702 0.608 17
AI1 "C6'" C 7.702 -0.892 18
AI1 "C7'" C 6.404 1.357 19
AI1 "O1'" O 5.104 0.608 20
AI1 "N1'" N 6.404 2.857 21
AI1 C1B C 5.104 3.607 22
AI1 C2B C 5.104 5.107 23
AI1 C3B C 6.404 5.857 24
AI1 C4B C 6.404 7.357 25
AI1 C5B C 5.104 8.107 26
AI1 C6B C 3.805 7.357 27
AI1 C7B C 3.805 5.857 28
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
AI1 C1 O1 SINGLE BEGINDASH 1
AI1 C1 C2 SINGLE NONE 2
AI1 C1 O5 SINGLE NONE 3
AI1 O1 "C1'" SINGLE NONE 4
AI1 C2 O2 SINGLE BEGINDASH 5
AI1 C2 C3 SINGLE NONE 6
AI1 C3 O3 SINGLE BEGINWEDGE 7
AI1 C3 C4 SINGLE NONE 8
AI1 C4 O4 SINGLE BEGINWEDGE 9
AI1 C4 C5 SINGLE NONE 10
AI1 C5 O5 SINGLE NONE 11
AI1 C5 C6 SINGLE BEGINWEDGE 12
AI1 C6 O6 SINGLE NONE 13
AI1 "C1'" "C2'" DOUBLE NONE 14
AI1 "C1'" "C6'" SINGLE NONE 15
AI1 "C2'" "C3'" SINGLE NONE 16
AI1 "C3'" "C4'" DOUBLE NONE 17
AI1 "C4'" "C5'" SINGLE NONE 18
AI1 "C5'" "C6'" DOUBLE NONE 19
AI1 "C5'" "C7'" SINGLE NONE 20
AI1 "C7'" "O1'" DOUBLE NONE 21
AI1 "C7'" "N1'" SINGLE NONE 22
AI1 "N1'" C1B SINGLE NONE 23
AI1 C1B C2B SINGLE NONE 24
AI1 C2B C3B DOUBLE NONE 25
AI1 C2B C7B SINGLE NONE 26
AI1 C3B C4B SINGLE NONE 27
AI1 C4B C5B DOUBLE NONE 28
AI1 C5B C6B SINGLE NONE 29
AI1 C6B C7B DOUBLE NONE 30
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
AI1 MurckoScaffold S1 scaffold 'O=C(NCc1ccccc1)c1cccc(O[C@@H]2CCCCO2)c1' InChI=1S/C19H21NO3/c21-19(20-14-15-7-2-1-3-8-15)16-9-6-10-17(13-16)23-18-11-4-5-12-22-18/h1-3,6-10,13,18H,4-5,11-12,14H2,(H,20,21)/t18-/m1/s1 DVVHTLOQXDTERX-GOSISDBHSA-N
AI1 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
AI1 phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
AI1 pyranose F3 fragment OC1CCCCO1 InChI=1S/C5H10O2/c6-5-3-1-2-4-7-5/h5-6H,1-4H2 CELWCAITJAEQNL-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
AI1 C1 S1 1
AI1 O1 S1 1
AI1 C2 S1 1
AI1 C3 S1 1
AI1 C4 S1 1
AI1 C5 S1 1
AI1 O5 S1 1
AI1 "C1'" S1 1
AI1 "C2'" S1 1
AI1 "C3'" S1 1
AI1 "C4'" S1 1
AI1 "C5'" S1 1
AI1 "C6'" S1 1
AI1 "C7'" S1 1
AI1 "O1'" S1 1
AI1 "N1'" S1 1
AI1 C1B S1 1
AI1 C2B S1 1
AI1 C3B S1 1
AI1 C4B S1 1
AI1 C5B S1 1
AI1 C6B S1 1
AI1 C7B S1 1
AI1 "N1'" F1 1
AI1 "C7'" F1 1
AI1 "O1'" F1 1
AI1 "C5'" F1 1
AI1 "C1'" F2 1
AI1 "C2'" F2 1
AI1 "C3'" F2 1
AI1 "C4'" F2 1
AI1 "C5'" F2 1
AI1 "C6'" F2 1
AI1 C2B F2 2
AI1 C3B F2 2
AI1 C4B F2 2
AI1 C5B F2 2
AI1 C6B F2 2
AI1 C7B F2 2
AI1 C4 F3 1
AI1 C5 F3 1
AI1 O5 F3 1
AI1 C1 F3 1
AI1 C2 F3 1
AI1 C3 F3 1
AI1 O1 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id AI1
_pdbe_chem_comp_rdkit_properties.exactmw 389.147
_pdbe_chem_comp_rdkit_properties.amw 389.404
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 10
_pdbe_chem_comp_rdkit_properties.NumHBD 5
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 28
_pdbe_chem_comp_rdkit_properties.NumAtoms 51
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 8
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.350
_pdbe_chem_comp_rdkit_properties.NumRings 3
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 5
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 194.237
_pdbe_chem_comp_rdkit_properties.tpsa 128.480
_pdbe_chem_comp_rdkit_properties.CrippenClogP -0.777
_pdbe_chem_comp_rdkit_properties.CrippenMR 97.307
_pdbe_chem_comp_rdkit_properties.chi0v 13.305
_pdbe_chem_comp_rdkit_properties.chi1v 7.034
_pdbe_chem_comp_rdkit_properties.chi2v 2.871
_pdbe_chem_comp_rdkit_properties.chi3v 2.871
_pdbe_chem_comp_rdkit_properties.chi4v 1.664
_pdbe_chem_comp_rdkit_properties.chi0n 36.305
_pdbe_chem_comp_rdkit_properties.chi1n 18.115
_pdbe_chem_comp_rdkit_properties.chi2n 2.871
_pdbe_chem_comp_rdkit_properties.chi3n 2.871
_pdbe_chem_comp_rdkit_properties.chi4n 1.664
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.490
_pdbe_chem_comp_rdkit_properties.kappa1 6.007
_pdbe_chem_comp_rdkit_properties.kappa2 9.135
_pdbe_chem_comp_rdkit_properties.kappa3 4.669
_pdbe_chem_comp_rdkit_properties.Phi 1.960
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
AI1 UniChem DrugBank DB03446
AI1 UniChem ZINC ZINC000006580001
AI1 UniChem SureChEMBL SCHEMBL4327457
AI1 UniChem PubChem 445579
AI1 UniChem 'Probes And Drugs' PD007526
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
AI1 C1 -2.309 0.700 -0.517 ETKDGv3 1
AI1 O1 -1.972 -0.183 -1.592 ETKDGv3 2
AI1 C2 -2.647 -0.072 0.803 ETKDGv3 3
AI1 O2 -2.771 -1.458 0.588 ETKDGv3 4
AI1 C3 -3.909 0.490 1.499 ETKDGv3 5
AI1 O3 -3.602 1.691 2.168 ETKDGv3 6
AI1 C4 -5.097 0.672 0.512 ETKDGv3 7
AI1 O4 -5.923 1.727 0.942 ETKDGv3 8
AI1 C5 -4.599 0.906 -0.943 ETKDGv3 9
AI1 O5 -3.351 1.572 -0.933 ETKDGv3 10
AI1 C6 -5.598 1.716 -1.786 ETKDGv3 11
AI1 O6 -5.206 1.724 -3.132 ETKDGv3 12
AI1 "C1'" -0.792 -0.938 -1.686 ETKDGv3 13
AI1 "C2'" -0.650 -1.765 -2.730 ETKDGv3 14
AI1 "C3'" 0.562 -2.592 -2.872 ETKDGv3 15
AI1 "C4'" 1.539 -2.517 -1.963 ETKDGv3 16
AI1 "C5'" 1.418 -1.593 -0.805 ETKDGv3 17
AI1 "C6'" 0.299 -0.853 -0.675 ETKDGv3 18
AI1 "C7'" 2.500 -1.501 0.205 ETKDGv3 19
AI1 "O1'" 2.224 -1.125 1.378 ETKDGv3 20
AI1 "N1'" 3.859 -1.821 -0.136 ETKDGv3 21
AI1 C1B 4.936 -1.806 0.852 ETKDGv3 22
AI1 C2B 5.312 -0.391 1.196 ETKDGv3 23
AI1 C3B 5.949 0.382 0.297 ETKDGv3 24
AI1 C4B 6.296 1.780 0.631 ETKDGv3 25
AI1 C5B 5.973 2.284 1.827 ETKDGv3 26
AI1 C6B 5.268 1.444 2.817 ETKDGv3 27
AI1 C7B 4.954 0.177 2.520 ETKDGv3 28
AI1 H1 -1.435 1.356 -0.318 ETKDGv3 29
AI1 H2 -1.796 0.061 1.507 ETKDGv3 30
AI1 HO2 -3.560 -1.611 0.007 ETKDGv3 31
AI1 H3 -4.223 -0.237 2.280 ETKDGv3 32
AI1 HO3 -3.345 2.365 1.488 ETKDGv3 33
AI1 H4 -5.696 -0.269 0.500 ETKDGv3 34
AI1 HO4 -6.413 1.399 1.741 ETKDGv3 35
AI1 H5 -4.510 -0.082 -1.452 ETKDGv3 36
AI1 HC61 -5.680 2.759 -1.403 ETKDGv3 37
AI1 HC62 -6.602 1.246 -1.719 ETKDGv3 38
AI1 HO6 -4.482 2.398 -3.216 ETKDGv3 39
AI1 "H2'" -1.433 -1.840 -3.474 ETKDGv3 40
AI1 "H3'" 0.652 -3.272 -3.710 ETKDGv3 41
AI1 "H4'" 2.403 -3.158 -2.072 ETKDGv3 42
AI1 "H6'" 0.202 -0.176 0.162 ETKDGv3 43
AI1 "HN'1" 4.116 -2.010 -1.130 ETKDGv3 44
AI1 "H1'1" 5.825 -2.328 0.435 ETKDGv3 45
AI1 "H1'2" 4.623 -2.370 1.758 ETKDGv3 46
AI1 H3B 6.210 -0.007 -0.679 ETKDGv3 47
AI1 H4B 6.811 2.394 -0.097 ETKDGv3 48
AI1 "H5'" 6.226 3.308 2.072 ETKDGv3 49
AI1 H6B 5.006 1.856 3.783 ETKDGv3 50
AI1 "H7'" 4.436 -0.431 3.251 ETKDGv3 51
#