data_ACM
#
_chem_comp.id ACM
_chem_comp.name ACETAMIDE
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula 'C2 H5 N O'
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 1999-07-08
_chem_comp.pdbx_modified_date 2024-09-27
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces CNM
_chem_comp.formula_weight 59.067
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code ACM
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1PEA
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
_chem_comp.pdbx_pcm Y
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
ACM C1 C1 C 0 1 N N N N N N 49.835 33.373 38.562 0.058 0.000 -0.030 C1 ACM 1
ACM O O O 0 1 N N N N N N 50.281 34.483 38.243 1.244 0.000 -0.284 O ACM 2
ACM N N N 0 1 N N N N N N 48.868 32.792 37.890 -0.845 0.000 -1.030 N ACM 3
ACM C2 C2 C 0 1 N N N N N N 50.440 32.591 39.725 -0.404 0.000 1.403 C2 ACM 4
ACM HN1 1HN H 0 1 N N N N N N 48.463 33.314 37.112 -0.547 0.000 -1.953 HN1 ACM 5
ACM HN2 2HN H 0 1 N N N N N N 48.500 31.877 38.152 -1.793 0.000 -0.826 HN2 ACM 6
ACM H21 1H2 H 0 1 N N N N N N 50.038 31.591 40.012 0.462 0.000 2.065 H21 ACM 7
ACM H22 2H2 H 0 1 N N N N N N 51.534 32.485 39.540 -1.004 0.890 1.591 H22 ACM 8
ACM H23 3H2 H 0 1 N N N N N N 50.423 33.244 40.628 -1.004 -0.890 1.591 H23 ACM 9
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ACM C1 O DOUB N N 1
ACM C1 N SING N N 2
ACM C1 C2 SING N N 3
ACM N HN1 SING N N 4
ACM N HN2 SING N N 5
ACM C2 H21 SING N N 6
ACM C2 H22 SING N N 7
ACM C2 H23 SING N N 8
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
ACM SMILES ACDLabs 10.04 'O=C(N)C'
ACM SMILES_CANONICAL CACTVS 3.341 'CC(N)=O'
ACM SMILES CACTVS 3.341 'CC(N)=O'
ACM SMILES_CANONICAL 'OpenEye OEToolkits' 1.5.0 'CC(=O)N'
ACM SMILES 'OpenEye OEToolkits' 1.5.0 'CC(=O)N'
ACM InChI InChI 1.03 'InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4)'
ACM InChIKey InChI 1.03 DLFVBJFMPXGRIB-UHFFFAOYSA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
ACM 'SYSTEMATIC NAME' ACDLabs 10.04 acetamide
ACM 'SYSTEMATIC NAME' 'OpenEye OEToolkits' 1.5.0 ethanamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
ACM 'Create component' 1999-07-08 EBI
ACM 'Modify descriptor' 2011-06-04 RCSB
ACM 'Modify PCM' 2024-09-27 PDBE
#
_pdbx_chem_comp_pcm.pcm_id 1
_pdbx_chem_comp_pcm.comp_id ACM
_pdbx_chem_comp_pcm.modified_residue_id CYS
_pdbx_chem_comp_pcm.type None
_pdbx_chem_comp_pcm.category 'Covalent chemical modification'
_pdbx_chem_comp_pcm.position 'Amino-acid side chain'
_pdbx_chem_comp_pcm.polypeptide_position 'Any position'
_pdbx_chem_comp_pcm.comp_id_linking_atom C2
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom SG
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession ?
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession ?
#
_pdbe_chem_comp_drugbank_details.comp_id ACM
_pdbe_chem_comp_drugbank_details.drugbank_id DB02736
_pdbe_chem_comp_drugbank_details.type 'small molecule'
_pdbe_chem_comp_drugbank_details.name Acetamide
_pdbe_chem_comp_drugbank_details.description ?
_pdbe_chem_comp_drugbank_details.cas_number 60-35-5
_pdbe_chem_comp_drugbank_details.mechanism_of_action ?
#
_pdbe_chem_comp_drugbank_classification.comp_id ACM
_pdbe_chem_comp_drugbank_classification.drugbank_id DB02736
_pdbe_chem_comp_drugbank_classification.parent 'Carboximidic acids'
_pdbe_chem_comp_drugbank_classification.kingdom 'Organic compounds'
_pdbe_chem_comp_drugbank_classification.class 'Carboximidic acids and derivatives'
_pdbe_chem_comp_drugbank_classification.superclass 'Organic acids and derivatives'
_pdbe_chem_comp_drugbank_classification.description
'This compound belongs to the class of organic compounds known as carboximidic acids. These are organic acids with the general formula RC(=N)-OH (R=H, organic group).'
#
_pdbe_chem_comp_drugbank_targets.comp_id ACM
_pdbe_chem_comp_drugbank_targets.drugbank_id DB02736
_pdbe_chem_comp_drugbank_targets.name 'Aliphatic amidase expression-regulating protein'
_pdbe_chem_comp_drugbank_targets.organism 'Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)'
_pdbe_chem_comp_drugbank_targets.uniprot_id P27017
_pdbe_chem_comp_drugbank_targets.pharmacologically_active unknown
_pdbe_chem_comp_drugbank_targets.ordinal 1
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
ACM C1 C 5.104 -0.090 1
ACM O O 6.404 0.660 2
ACM N N 3.805 0.660 3
ACM C2 C 5.104 -1.590 4
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
ACM C1 O DOUBLE NONE 1
ACM C1 N SINGLE NONE 2
ACM C1 C2 SINGLE NONE 3
#
_pdbe_chem_comp_substructure.comp_id ACM
_pdbe_chem_comp_substructure.substructure_name amide
_pdbe_chem_comp_substructure.id F1
_pdbe_chem_comp_substructure.substructure_type fragment
_pdbe_chem_comp_substructure.substructure_smiles CC(N)=O
_pdbe_chem_comp_substructure.substructure_inchis InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4)
_pdbe_chem_comp_substructure.substructure_inchikeys DLFVBJFMPXGRIB-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
ACM N F1 1
ACM C1 F1 1
ACM O F1 1
ACM C2 F1 1
#
_pdbe_chem_comp_rdkit_properties.comp_id ACM
_pdbe_chem_comp_rdkit_properties.exactmw 59.037
_pdbe_chem_comp_rdkit_properties.amw 59.068
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 2
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 1
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 1
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 4
_pdbe_chem_comp_rdkit_properties.NumAtoms 9
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 2
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.500
_pdbe_chem_comp_rdkit_properties.NumRings 0
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 31.747
_pdbe_chem_comp_rdkit_properties.tpsa 43.090
_pdbe_chem_comp_rdkit_properties.CrippenClogP -0.508
_pdbe_chem_comp_rdkit_properties.CrippenMR 14.868
_pdbe_chem_comp_rdkit_properties.chi0v 1.855
_pdbe_chem_comp_rdkit_properties.chi1v 0.678
_pdbe_chem_comp_rdkit_properties.chi2v 0
_pdbe_chem_comp_rdkit_properties.chi3v 0
_pdbe_chem_comp_rdkit_properties.chi4v 0
_pdbe_chem_comp_rdkit_properties.chi0n 6.855
_pdbe_chem_comp_rdkit_properties.chi1n 3.072
_pdbe_chem_comp_rdkit_properties.chi2n 0
_pdbe_chem_comp_rdkit_properties.chi3n 0
_pdbe_chem_comp_rdkit_properties.chi4n 0
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -0.530
_pdbe_chem_comp_rdkit_properties.kappa1 0.379
_pdbe_chem_comp_rdkit_properties.kappa2 0.875
_pdbe_chem_comp_rdkit_properties.kappa3 1.156
_pdbe_chem_comp_rdkit_properties.Phi 0.083
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
ACM UniChem DrugBank DB02736
ACM UniChem 'Guide to Pharmacology' 4661
ACM UniChem 'KEGG LIGAND' C06244
ACM UniChem ChEBI 27856
ACM UniChem ChEBI 49028
ACM UniChem ZINC ZINC000008034818
ACM UniChem eMolecules 27677444
ACM UniChem eMolecules 474292
ACM UniChem fdasrs 8XOE1JSO29
ACM UniChem SureChEMBL SCHEMBL5232
ACM UniChem HMDB HMDB0031645
ACM UniChem 'PubChem TPHARMA' 15296862
ACM UniChem NMRShiftDB 10016739
ACM UniChem LINCS LSM-37224
ACM UniChem ACTor 60-35-5
ACM UniChem 'EPA CompTox Dashboard' DTXSID7020005
ACM UniChem BRENDA 105345
ACM UniChem BRENDA 1057
ACM UniChem BRENDA 21808
ACM UniChem BRENDA 253134
ACM UniChem Rhea 27856
ACM UniChem ChemicalBook CB3358160
ACM UniChem ChemicalBook CB3453432
ACM UniChem MedChemExpress HY-Y0946
ACM UniChem 'Probes And Drugs' PD002828
ACM UniChem CCDC ACEMID
ACM UniChem Nikkaji J2.339F
ACM UniChem PubChem 178
ACM UniChem Mcule MCULE-9280264861
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
ACM C1 0.146 -0.555 0.042 ETKDGv3 1
ACM O 0.102 -1.800 0.227 ETKDGv3 2
ACM N 1.398 0.081 -0.207 ETKDGv3 3
ACM C2 -1.107 0.255 0.119 ETKDGv3 4
ACM HN1 1.451 1.115 -0.346 ETKDGv3 5
ACM HN2 2.277 -0.482 -0.251 ETKDGv3 6
ACM H21 -2.000 -0.405 0.093 ETKDGv3 7
ACM H22 -1.113 0.837 1.064 ETKDGv3 8
ACM H23 -1.155 0.955 -0.741 ETKDGv3 9
#