data_ABS
#
_chem_comp.id ABS
_chem_comp.name "(S)-(N-PHENYL-2-HYDROXY-ETHYL)-2'-DEOXY-ADENOSINE-5'-MONOPHOSPHATE"
_chem_comp.type "DNA LINKING"
_chem_comp.pdbx_type ATOMN
_chem_comp.formula "C18 H22 N5 O7 P"
_chem_comp.mon_nstd_parent_comp_id DA
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2001-10-12
_chem_comp.pdbx_modified_date 2011-06-04
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 451.370
_chem_comp.one_letter_code A
_chem_comp.three_letter_code ABS
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details ?
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 1K5F
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
ABS P P P 0 1 N N N N N N 0.161 8.534 14.530 -1.714 0.153 -7.037 P ABS 1
ABS OP1 O1P O 0 1 N N N N N N 1.186 7.679 15.169 -2.397 -1.073 -6.570 OP1 ABS 2
ABS OP2 O2P O 0 1 N N N N N N -0.266 9.790 15.187 -2.812 1.273 -7.402 OP2 ABS 3
ABS "O5'" O5* O 0 1 N N N N N N -1.150 7.639 14.259 -0.749 0.706 -5.873 "O5'" ABS 4
ABS "C5'" C5* C 0 1 N N N N N N -2.245 8.170 13.504 0.197 -0.327 -5.596 "C5'" ABS 5
ABS "C4'" C4* C 0 1 N N R N N N -3.429 7.209 13.479 1.149 0.136 -4.491 "C4'" ABS 6
ABS "O4'" O4* O 0 1 N N N N N N -3.051 5.941 12.882 0.416 0.403 -3.274 "O4'" ABS 7
ABS "C1'" C1* C 0 1 N N R N N N -3.190 4.894 13.868 1.397 0.342 -2.215 "C1'" ABS 8
ABS N9 N9 N 0 1 Y N N N N N -2.039 3.972 13.792 0.744 0.107 -0.925 N9 ABS 9
ABS C4 C4 C 0 1 Y N N N N N -2.066 2.650 13.411 1.234 0.456 0.307 C4 ABS 10
ABS N3 N3 N 0 1 Y N N N N N -3.162 1.950 13.060 2.330 1.067 0.743 N3 ABS 11
ABS C2 C2 C 0 1 Y N N N N N -2.862 0.698 12.745 2.520 1.270 2.030 C2 ABS 12
ABS N1 N1 N 0 1 Y N N N N N -1.657 0.136 12.751 1.645 0.889 2.943 N1 ABS 13
ABS C6 C6 C 0 1 Y N N N N N -0.547 0.857 13.109 0.517 0.275 2.602 C6 ABS 14
ABS N6 N6 N 0 1 N N N N N N 0.680 0.257 13.115 -0.392 -0.120 3.567 N6 ABS 15
ABS CA CA C 0 1 N N S N N N 2.663 0.185 14.579 -1.273 -0.396 5.832 CA ABS 16
ABS OA OA O 0 1 N N N N N N 2.774 -1.158 14.133 -1.410 -1.802 5.621 OA ABS 17
ABS CB CB C 0 1 N N N N N N 1.921 0.995 13.518 -0.117 0.136 4.983 CB ABS 18
ABS CS6 CS6 C 0 1 Y N N N N N 4.051 0.740 14.795 -0.990 -0.131 7.288 CS6 ABS 19
ABS CS1 CS1 C 0 1 Y N N N N N 4.299 2.119 14.704 -1.412 1.049 7.871 CS1 ABS 20
ABS CS5 CS5 C 0 1 Y N N N N N 5.097 -0.140 15.089 -0.314 -1.071 8.043 CS5 ABS 21
ABS CS2 CS2 C 0 1 Y N N N N N 5.595 2.610 14.908 -1.153 1.292 9.206 CS2 ABS 22
ABS CS4 CS4 C 0 1 Y N N N N N 6.390 0.349 15.291 -0.051 -0.826 9.378 CS4 ABS 23
ABS CS3 CS3 C 0 1 Y N N N N N 6.641 1.725 15.202 -0.472 0.354 9.960 CS3 ABS 24
ABS C5 C5 C 0 1 Y N N N N N -0.762 2.200 13.462 0.270 0.036 1.240 C5 ABS 25
ABS N7 N7 N 0 1 Y N N N N N 0.095 3.226 13.872 -0.735 -0.542 0.541 N7 ABS 26
ABS C8 C8 C 0 1 Y N N N N N -0.729 4.205 14.038 -0.459 -0.502 -0.729 C8 ABS 27
ABS "C2'" C2* C 0 1 N N N N N N -3.267 5.596 15.206 2.302 -0.853 -2.585 "C2'" ABS 28
ABS "C3'" C3* C 0 1 N N S N N N -3.908 6.916 14.889 2.137 -0.990 -4.115 "C3'" ABS 29
ABS "O3'" O3* O 0 1 N N N N N N -5.340 6.837 14.921 3.390 -0.798 -4.774 "O3'" ABS 30
ABS OP3 O3P O 0 1 N Y N N N N 0.641 8.887 13.031 -0.838 -0.184 -8.345 OP3 ABS 31
ABS HOP2 2HOP H 0 0 N N N N N N -0.924 10.338 14.776 -3.367 0.903 -8.101 HOP2 ABS 32
ABS "H5'" 1H5* H 0 1 N N N N N N -1.917 8.354 12.481 0.767 -0.549 -6.498 "H5'" ABS 33
ABS "H5''" 2H5* H 0 0 N N N N N N -2.563 9.112 13.950 -0.329 -1.224 -5.269 "H5''" ABS 34
ABS "H4'" H4* H 0 1 N N N N N N -4.241 7.649 12.909 1.694 1.025 -4.810 "H4'" ABS 35
ABS "H1'" H1* H 0 1 N N N N N N -4.114 4.342 13.696 1.979 1.263 -2.183 "H1'" ABS 36
ABS H2 H2 H 0 1 N N N N N N -3.695 0.060 12.445 3.424 1.766 2.351 H2 ABS 37
ABS H6 H6 H 0 1 N N N N N N 0.752 -0.715 12.846 -1.212 -0.568 3.306 H6 ABS 38
ABS HA HA H 0 1 N N N N N N 2.114 0.216 15.508 -2.197 0.105 5.544 HA ABS 39
ABS HOA HOA H 0 1 N N N N N N 2.645 -1.731 14.892 -0.573 -2.207 5.888 HOA ABS 40
ABS HB1 HB1 H 0 1 N N N N N N 1.671 1.966 13.911 0.806 -0.364 5.271 HB1 ABS 41
ABS HB2 HB2 H 0 1 N N N N N N 2.562 1.109 12.666 -0.013 1.210 5.143 HB2 ABS 42
ABS HS1 HS1 H 0 1 N N N N N N 3.492 2.801 14.476 -1.944 1.782 7.282 HS1 ABS 43
ABS HS5 HS5 H 0 1 N N N N N N 4.904 -1.202 15.157 0.014 -1.994 7.588 HS5 ABS 44
ABS HS2 HS2 H 0 1 N N N N N N 5.787 3.671 14.837 -1.481 2.215 9.661 HS2 ABS 45
ABS HS4 HS4 H 0 1 N N N N N N 7.193 -0.335 15.517 0.480 -1.559 9.967 HS4 ABS 46
ABS HS3 HS3 H 0 1 N N N N N N 7.640 2.103 15.359 -0.269 0.544 11.004 HS3 ABS 47
ABS H8 H8 H 0 1 N N N N N N -0.385 5.186 14.358 -1.090 -0.893 -1.513 H8 ABS 48
ABS "H2'" 1H2* H 0 1 N N N N N N -2.267 5.752 15.613 1.964 -1.758 -2.081 "H2'" ABS 49
ABS "H2''" 2H2* H 0 0 N N N N N N -3.878 5.029 15.903 3.340 -0.638 -2.331 "H2''" ABS 50
ABS "H3'" H3* H 0 1 N N N N N N -3.551 7.688 15.570 1.719 -1.964 -4.368 "H3'" ABS 51
ABS "HO3'" H3T H 0 0 N Y N N N N -5.639 6.653 15.803 3.973 -1.511 -4.478 "HO3'" ABS 52
ABS HOP3 3HOP H 0 0 N N N N N N -0.017 9.435 12.620 -0.410 0.639 -8.616 HOP3 ABS 53
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ABS P OP1 DOUB N N 1
ABS P OP2 SING N N 2
ABS P "O5'" SING N N 3
ABS P OP3 SING N N 4
ABS OP2 HOP2 SING N N 5
ABS "O5'" "C5'" SING N N 6
ABS "C5'" "C4'" SING N N 7
ABS "C5'" "H5'" SING N N 8
ABS "C5'" "H5''" SING N N 9
ABS "C4'" "O4'" SING N N 10
ABS "C4'" "C3'" SING N N 11
ABS "C4'" "H4'" SING N N 12
ABS "O4'" "C1'" SING N N 13
ABS "C1'" N9 SING N N 14
ABS "C1'" "C2'" SING N N 15
ABS "C1'" "H1'" SING N N 16
ABS N9 C4 SING Y N 17
ABS N9 C8 SING Y N 18
ABS C4 N3 DOUB Y N 19
ABS C4 C5 SING Y N 20
ABS N3 C2 SING Y N 21
ABS C2 N1 DOUB Y N 22
ABS C2 H2 SING N N 23
ABS N1 C6 SING Y N 24
ABS C6 N6 SING N N 25
ABS C6 C5 DOUB Y N 26
ABS N6 CB SING N N 27
ABS N6 H6 SING N N 28
ABS CA OA SING N N 29
ABS CA CB SING N N 30
ABS CA CS6 SING N N 31
ABS CA HA SING N N 32
ABS OA HOA SING N N 33
ABS CB HB1 SING N N 34
ABS CB HB2 SING N N 35
ABS CS6 CS1 DOUB Y N 36
ABS CS6 CS5 SING Y N 37
ABS CS1 CS2 SING Y N 38
ABS CS1 HS1 SING N N 39
ABS CS5 CS4 DOUB Y N 40
ABS CS5 HS5 SING N N 41
ABS CS2 CS3 DOUB Y N 42
ABS CS2 HS2 SING N N 43
ABS CS4 CS3 SING Y N 44
ABS CS4 HS4 SING N N 45
ABS CS3 HS3 SING N N 46
ABS C5 N7 SING Y N 47
ABS N7 C8 DOUB Y N 48
ABS C8 H8 SING N N 49
ABS "C2'" "C3'" SING N N 50
ABS "C2'" "H2'" SING N N 51
ABS "C2'" "H2''" SING N N 52
ABS "C3'" "O3'" SING N N 53
ABS "C3'" "H3'" SING N N 54
ABS "O3'" "HO3'" SING N N 55
ABS OP3 HOP3 SING N N 56
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
ABS SMILES ACDLabs 10.04 O=P(O)(O)OCC4OC(n2cnc1c(ncnc12)NCC(O)c3ccccc3)CC4O
ABS SMILES_CANONICAL CACTVS 3.341 O[C@H]1C[C@@H](O[C@@H]1CO[P](O)(O)=O)n2cnc3c(NC[C@@H](O)c4ccccc4)ncnc23
ABS SMILES CACTVS 3.341 O[CH]1C[CH](O[CH]1CO[P](O)(O)=O)n2cnc3c(NC[CH](O)c4ccccc4)ncnc23
ABS SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 c1ccc(cc1)[C@@H](CNc2c3c(ncn2)n(cn3)[C@H]4C[C@@H]([C@H](O4)COP(=O)(O)O)O)O
ABS SMILES "OpenEye OEToolkits" 1.5.0 c1ccc(cc1)C(CNc2c3c(ncn2)n(cn3)C4CC(C(O4)COP(=O)(O)O)O)O
ABS InChI InChI 1.03 InChI=1S/C18H22N5O7P/c24-12-6-15(30-14(12)8-29-31(26,27)28)23-10-22-16-17(20-9-21-18(16)23)19-7-13(25)11-4-2-1-3-5-11/h1-5,9-10,12-15,24-25H,6-8H2,(H,19,20,21)(H2,26,27,28)/t12-,13+,14+,15+/m0/s1
ABS InChIKey InChI 1.03 XQQQZMWASYSYAT-GBJTYRQASA-N
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
ABS "SYSTEMATIC NAME" ACDLabs 10.04 "2'-deoxy-N-[(2S)-2-hydroxy-2-phenylethyl]adenosine 5'-(dihydrogen phosphate)"
ABS "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "[(2R,3S,5R)-3-hydroxy-5-[6-[[(2S)-2-hydroxy-2-phenyl-ethyl]amino]purin-9-yl]oxolan-2-yl]methyl dihydrogen phosphate"
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
ABS 'Create component' 2001-10-12 RCSB
ABS 'Modify descriptor' 2011-06-04 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
ABS P P 11.468 7.580 1
ABS OP1 O 11.007 9.008 2
ABS OP2 O 12.896 8.041 3
ABS "O5'" O 11.929 6.153 4
ABS "C5'" C 10.924 5.040 5
ABS "C4'" C 11.385 3.612 6
ABS "O4'" O 10.501 2.400 7
ABS "C1'" C 11.380 1.185 8
ABS N9 N 10.915 -0.240 9
ABS C4 C 9.495 -0.698 10
ABS N3 N 8.196 0.052 11
ABS C2 C 6.897 -0.698 12
ABS N1 N 6.897 -2.197 13
ABS C6 C 8.196 -2.947 14
ABS N6 N 8.196 -4.447 15
ABS CA C 6.897 -6.697 16
ABS OA O 8.196 -7.447 17
ABS CB C 6.897 -5.197 18
ABS CS6 C 5.598 -7.447 19
ABS CS1 C 4.299 -6.697 20
ABS CS5 C 5.598 -8.947 21
ABS CS2 C 3.000 -7.447 22
ABS CS4 C 4.299 -9.697 23
ABS CS3 C 3.000 -8.947 24
ABS C5 C 9.495 -2.197 25
ABS N7 N 10.915 -2.655 26
ABS C8 C 11.790 -1.448 27
ABS "C2'" C 12.808 1.646 28
ABS "C3'" C 12.810 3.146 29
ABS "O3'" O 14.026 4.026 30
ABS OP3 O 10.041 7.119 31
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
ABS P OP1 DOUBLE NONE 1
ABS P OP2 SINGLE NONE 2
ABS P "O5'" SINGLE NONE 3
ABS P OP3 SINGLE NONE 4
ABS "O5'" "C5'" SINGLE NONE 5
ABS "C4'" "C5'" SINGLE BEGINDASH 6
ABS "C4'" "O4'" SINGLE NONE 7
ABS "C4'" "C3'" SINGLE NONE 8
ABS "O4'" "C1'" SINGLE NONE 9
ABS "C1'" N9 SINGLE BEGINDASH 10
ABS "C1'" "C2'" SINGLE NONE 11
ABS N9 C4 SINGLE NONE 12
ABS N9 C8 SINGLE NONE 13
ABS C4 N3 DOUBLE NONE 14
ABS C4 C5 SINGLE NONE 15
ABS N3 C2 SINGLE NONE 16
ABS C2 N1 DOUBLE NONE 17
ABS N1 C6 SINGLE NONE 18
ABS C6 N6 SINGLE NONE 19
ABS C6 C5 DOUBLE NONE 20
ABS N6 CB SINGLE NONE 21
ABS CA OA SINGLE BEGINWEDGE 22
ABS CA CB SINGLE NONE 23
ABS CA CS6 SINGLE NONE 24
ABS CS6 CS1 DOUBLE NONE 25
ABS CS6 CS5 SINGLE NONE 26
ABS CS1 CS2 SINGLE NONE 27
ABS CS5 CS4 DOUBLE NONE 28
ABS CS2 CS3 DOUBLE NONE 29
ABS CS4 CS3 SINGLE NONE 30
ABS C5 N7 SINGLE NONE 31
ABS N7 C8 DOUBLE NONE 32
ABS "C2'" "C3'" SINGLE NONE 33
ABS "C3'" "O3'" SINGLE BEGINWEDGE 34
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
ABS MurckoScaffold S1 scaffold 'c1ccc(CCNc2ncnc3c2ncn3[C@H]2CCCO2)cc1' InChI=1S/C17H19N5O/c1-2-5-13(6-3-1)8-9-18-16-15-17(20-11-19-16)22(12-21-15)14-7-4-10-23-14/h1-3,5-6,11-12,14H,4,7-10H2,(H,18,19,20)/t14-/m1/s1 DQOGHJHTRCTNRQ-CQSZACIVSA-N
ABS adenine F1 fragment 'Nc1ncnc2nc[nH]c12' InChI=1S/C5H5N5/c6-4-3-5(9-1-7-3)10-2-8-4/h1-2H,(H3,6,7,8,9,10) GFFGJBXGBJISGV-UHFFFAOYSA-N
ABS deoxyribose F2 fragment 'OCC1OC[CH2]C1O' InChI=1S/C5H10O3/c6-3-5-4(7)1-2-8-5/h4-7H,1-3H2 NSMOSDAEGJTOIQ-UHFFFAOYSA-N
ABS imidazole F3 fragment 'c1c[nH]cn1' InChI=1S/C3H4N2/c1-2-5-3-4-1/h1-3H,(H,4,5) RAXXELZNTBOGNW-UHFFFAOYSA-N
ABS phenyl F4 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
ABS phosphate F5 fragment O=P(O)(O)O InChI=1S/H3O4P/c1-5(2,3)4/h(H3,1,2,3,4) NBIIXXVUZAFLBC-UHFFFAOYSA-N
ABS purine F6 fragment 'c1ncc2[nH]cnc2n1' InChI=1S/C5H4N4/c1-4-5(8-2-6-1)9-3-7-4/h1-3H,(H,6,7,8,9) KDCGOANMDULRCW-UHFFFAOYSA-N
ABS pyrimidine F7 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
ABS "C4'" S1 1
ABS "O4'" S1 1
ABS "C1'" S1 1
ABS N9 S1 1
ABS C4 S1 1
ABS N3 S1 1
ABS C2 S1 1
ABS N1 S1 1
ABS C6 S1 1
ABS N6 S1 1
ABS CA S1 1
ABS CB S1 1
ABS CS6 S1 1
ABS CS1 S1 1
ABS CS5 S1 1
ABS CS2 S1 1
ABS CS4 S1 1
ABS CS3 S1 1
ABS C5 S1 1
ABS N7 S1 1
ABS C8 S1 1
ABS "C2'" S1 1
ABS "C3'" S1 1
ABS N1 F1 1
ABS C6 F1 1
ABS C5 F1 1
ABS C4 F1 1
ABS N3 F1 1
ABS C2 F1 1
ABS N9 F1 1
ABS C8 F1 1
ABS N7 F1 1
ABS N6 F1 1
ABS "C1'" F2 1
ABS "C2'" F2 1
ABS "C3'" F2 1
ABS "O3'" F2 1
ABS "C4'" F2 1
ABS "O4'" F2 1
ABS "C5'" F2 1
ABS "O5'" F2 1
ABS C4 F3 1
ABS C5 F3 1
ABS N7 F3 1
ABS C8 F3 1
ABS N9 F3 1
ABS CS6 F4 1
ABS CS1 F4 1
ABS CS2 F4 1
ABS CS3 F4 1
ABS CS4 F4 1
ABS CS5 F4 1
ABS OP2 F5 1
ABS P F5 1
ABS OP1 F5 1
ABS "O5'" F5 1
ABS OP3 F5 1
ABS N7 F6 1
ABS C8 F6 1
ABS N9 F6 1
ABS C4 F6 1
ABS C5 F6 1
ABS C6 F6 1
ABS N1 F6 1
ABS C2 F6 1
ABS N3 F6 1
ABS C5 F7 1
ABS C4 F7 1
ABS N3 F7 1
ABS C2 F7 1
ABS N1 F7 1
ABS C6 F7 1
#
_pdbe_chem_comp_rdkit_properties.comp_id ABS
_pdbe_chem_comp_rdkit_properties.exactmw 451.126
_pdbe_chem_comp_rdkit_properties.amw 451.376
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 12
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 12
_pdbe_chem_comp_rdkit_properties.NumHBD 5
_pdbe_chem_comp_rdkit_properties.NumHBA 12
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 31
_pdbe_chem_comp_rdkit_properties.NumAtoms 53
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 13
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.389
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 4
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 207.615
_pdbe_chem_comp_rdkit_properties.tpsa 172.080
_pdbe_chem_comp_rdkit_properties.CrippenClogP -0.134
_pdbe_chem_comp_rdkit_properties.CrippenMR 104.448
_pdbe_chem_comp_rdkit_properties.chi0v 15.435
_pdbe_chem_comp_rdkit_properties.chi1v 9.171
_pdbe_chem_comp_rdkit_properties.chi2v 3.593
_pdbe_chem_comp_rdkit_properties.chi3v 3.593
_pdbe_chem_comp_rdkit_properties.chi4v 2.255
_pdbe_chem_comp_rdkit_properties.chi0n 36.541
_pdbe_chem_comp_rdkit_properties.chi1n 18.291
_pdbe_chem_comp_rdkit_properties.chi2n 3.278
_pdbe_chem_comp_rdkit_properties.chi3n 3.278
_pdbe_chem_comp_rdkit_properties.chi4n 2.060
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.440
_pdbe_chem_comp_rdkit_properties.kappa1 7.562
_pdbe_chem_comp_rdkit_properties.kappa2 8.968
_pdbe_chem_comp_rdkit_properties.kappa3 5.076
_pdbe_chem_comp_rdkit_properties.Phi 2.188
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
ABS UniChem ZINC ZINC000058626911
ABS UniChem PubChem 49866602
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
ABS P 4.894 4.365 0.390 ETKDGv3 1
ABS OP1 4.289 4.090 -0.968 ETKDGv3 2
ABS OP2 6.533 3.942 0.373 ETKDGv3 3
ABS "O5'" 4.062 3.480 1.588 ETKDGv3 4
ABS "C5'" 4.274 2.107 1.354 ETKDGv3 5
ABS "C4'" 3.491 1.297 2.391 ETKDGv3 6
ABS "O4'" 2.113 1.568 2.272 ETKDGv3 7
ABS "C1'" 1.415 0.363 2.508 ETKDGv3 8
ABS N9 0.549 0.071 1.367 ETKDGv3 9
ABS C4 -0.560 -0.806 1.359 ETKDGv3 10
ABS N3 -1.162 -1.333 2.380 ETKDGv3 11
ABS C2 -2.189 -2.315 2.116 ETKDGv3 12
ABS N1 -2.446 -2.692 0.886 ETKDGv3 13
ABS C6 -1.730 -2.143 -0.245 ETKDGv3 14
ABS N6 -2.007 -2.643 -1.565 ETKDGv3 15
ABS CA -2.481 -0.612 -2.921 ETKDGv3 16
ABS OA -2.211 0.004 -4.154 ETKDGv3 17
ABS CB -1.709 -1.942 -2.817 ETKDGv3 18
ABS CS6 -3.970 -0.839 -2.784 ETKDGv3 19
ABS CS1 -4.685 -1.392 -3.784 ETKDGv3 20
ABS CS5 -4.651 -0.512 -1.504 ETKDGv3 21
ABS CS2 -6.132 -1.644 -3.616 ETKDGv3 22
ABS CS4 -5.960 -0.748 -1.354 ETKDGv3 23
ABS CS3 -6.737 -1.338 -2.462 ETKDGv3 24
ABS C5 -0.810 -1.207 0.020 ETKDGv3 25
ABS N7 0.169 -0.607 -0.819 ETKDGv3 26
ABS C8 0.925 0.105 -0.025 ETKDGv3 27
ABS "C2'" 2.412 -0.769 2.736 ETKDGv3 28
ABS "C3'" 3.702 -0.203 2.220 ETKDGv3 29
ABS "O3'" 4.787 -0.664 2.982 ETKDGv3 30
ABS OP3 4.752 6.017 0.729 ETKDGv3 31
ABS HOP2 6.851 4.127 1.293 ETKDGv3 32
ABS "H5'" 5.354 1.859 1.457 ETKDGv3 33
ABS "H5''" 3.919 1.820 0.338 ETKDGv3 34
ABS "H4'" 3.820 1.606 3.410 ETKDGv3 35
ABS "H1'" 0.784 0.492 3.415 ETKDGv3 36
ABS H2 -2.738 -2.752 2.938 ETKDGv3 37
ABS H6 -2.560 -3.527 -1.634 ETKDGv3 38
ABS HA -2.150 0.069 -2.104 ETKDGv3 39
ABS HOA -1.285 0.360 -4.101 ETKDGv3 40
ABS HB1 -1.995 -2.593 -3.672 ETKDGv3 41
ABS HB2 -0.617 -1.770 -2.907 ETKDGv3 42
ABS HS1 -4.212 -1.663 -4.719 ETKDGv3 43
ABS HS5 -4.089 -0.085 -0.682 ETKDGv3 44
ABS HS2 -6.699 -2.080 -4.428 ETKDGv3 45
ABS HS4 -6.451 -0.509 -0.420 ETKDGv3 46
ABS HS3 -7.796 -1.525 -2.338 ETKDGv3 47
ABS H8 1.782 0.655 -0.390 ETKDGv3 48
ABS "H2'" 2.488 -0.982 3.826 ETKDGv3 49
ABS "H2''" 2.136 -1.705 2.202 ETKDGv3 50
ABS "H3'" 3.819 -0.483 1.146 ETKDGv3 51
ABS "HO3'" 5.606 -0.429 2.474 ETKDGv3 52
ABS HOP3 5.105 6.116 1.649 ETKDGv3 53
#