data_A97
#
_chem_comp.id A97
_chem_comp.name
N-[(6-methyl-2-oxo-4-propyl-1,2-dihydropyridin-3-yl)methyl]-6-[2-(4-methylpiperazin-1-yl)pyridin-4-yl]-1-(propan-2-yl)-1H-indazole-4-carboxamide
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C31 H39 N7 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2017-07-12
_chem_comp.pdbx_modified_date 2018-06-22
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 541.687
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code A97
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5WFC
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
A97 C18 C1 C 0 1 Y N N N N N 23.478 -0.411 -22.401 -2.266 -1.099 0.132 C18 A97 1
A97 C29 C2 C 0 1 N N N N N N 24.118 2.211 -16.387 3.556 -5.572 0.494 C29 A97 2
A97 C19 C3 C 0 1 Y N N N N N 23.117 -0.953 -21.138 -1.637 -2.442 0.135 C19 A97 3
A97 C25 C4 C 0 1 N N N N N N 23.233 -0.455 -16.155 2.362 -3.288 -0.754 C25 A97 4
A97 C16 C5 C 0 1 Y N N N N N 22.994 -0.126 -24.764 -2.044 1.303 0.225 C16 A97 5
A97 C28 C6 C 0 1 N N N N N N 23.322 2.679 -14.434 3.967 -5.448 -1.889 C28 A97 6
A97 C14 C7 C 0 1 N N N N N N 22.076 -0.438 -25.980 -1.197 2.507 0.326 C14 A97 7
A97 C17 C8 C 0 1 Y N N N N N 22.661 -0.682 -23.520 -1.466 0.041 0.227 C17 A97 8
A97 C12 C9 C 0 1 N N N N N N 20.496 -2.161 -27.006 0.982 3.579 0.520 C12 A97 9
A97 C21 C10 C 0 1 Y N N N N N 22.022 -2.562 -19.727 -1.795 -4.831 0.047 C21 A97 10
A97 C20 C11 C 0 1 Y N N N N N 22.354 -2.111 -21.018 -2.417 -3.601 0.041 C20 A97 11
A97 C26 C12 C 0 1 N N N N N N 22.897 0.664 -15.153 3.876 -3.421 -0.568 C26 A97 12
A97 C23 C13 C 0 1 Y N N N N N 23.127 -0.774 -18.715 0.295 -3.860 0.225 C23 A97 13
A97 C01 C14 C 0 1 N N N N N N 23.701 -0.498 -30.659 2.321 5.297 -3.532 C01 A97 14
A97 C02 C15 C 0 1 N N N N N N 23.412 -1.951 -30.262 2.912 4.940 -2.166 C02 A97 15
A97 C03 C16 C 0 1 N N N N N N 22.311 -2.011 -29.202 2.622 3.471 -1.854 C03 A97 16
A97 C04 C17 C 0 1 N N N N N N 21.998 -3.415 -28.631 3.204 3.119 -0.509 C04 A97 17
A97 C05 C18 C 0 1 N N N N N N 22.556 -4.587 -29.133 4.549 2.741 -0.396 C05 A97 18
A97 C06 C19 C 0 1 N N N N N N 22.197 -5.798 -28.555 5.063 2.427 0.817 C06 A97 19
A97 C07 C20 C 0 1 N N N N N N 22.788 -7.121 -29.089 6.510 2.022 0.931 C07 A97 20
A97 C09 C21 C 0 1 N N N N N N 20.784 -4.726 -27.007 2.994 2.837 1.855 C09 A97 21
A97 C11 C22 C 0 1 N N N N N N 21.100 -3.474 -27.553 2.429 3.170 0.612 C11 A97 22
A97 C30 C23 C 0 1 N N N N N N 23.562 1.448 -17.600 2.043 -5.440 0.308 C30 A97 23
A97 C31 C24 C 0 1 Y N N N N N 23.493 -0.271 -19.975 -0.252 -2.583 0.226 C31 A97 24
A97 C32 C25 C 0 1 Y N N N N N 24.603 0.421 -22.532 -3.647 -0.985 0.030 C32 A97 25
A97 C33 C26 C 0 1 Y N N N N N 24.950 0.994 -23.812 -4.245 0.270 0.026 C33 A97 26
A97 C34 C27 C 0 1 Y N N N N N 24.148 0.720 -24.906 -3.449 1.427 0.126 C34 A97 27
A97 C35 C28 C 0 1 Y N N N N N 24.719 1.404 -26.022 -4.325 2.533 0.097 C35 A97 28
A97 C38 C29 C 0 1 N N N N N N 27.063 2.395 -23.482 -6.729 -0.161 -0.177 C38 A97 29
A97 C39 C30 C 0 1 N N N N N N 26.819 3.908 -23.537 -7.652 0.077 1.020 C39 A97 30
A97 C40 C31 C 0 1 N N N N N N 28.402 2.044 -24.150 -7.475 0.171 -1.471 C40 A97 31
A97 N08 N1 N 0 1 N N N N N N 21.340 -5.844 -27.527 4.289 2.472 1.931 N08 A97 32
A97 N13 N2 N 0 1 N N N N N N 21.382 -1.730 -25.920 0.141 2.383 0.420 N13 A97 33
A97 N22 N3 N 0 1 Y N N N N N 22.412 -1.890 -18.628 -0.482 -4.929 0.140 N22 A97 34
A97 N24 N4 N 0 1 N N N N N N 23.565 -0.011 -17.511 1.673 -4.017 0.320 N24 A97 35
A97 N27 N5 N 0 1 N N N N N N 23.792 1.712 -15.148 4.245 -4.843 -0.580 N27 A97 36
A97 N36 N6 N 0 1 Y N N N N N 25.810 2.058 -25.599 -5.548 2.096 -0.007 N36 A97 37
A97 N37 N7 N 0 1 Y N N N N N 25.971 1.814 -24.260 -5.547 0.697 -0.060 N37 A97 38
A97 O10 O1 O 0 1 N N N N N N 20.023 -4.808 -26.095 2.312 2.878 2.866 O10 A97 39
A97 O15 O2 O 0 1 N N N N N N 21.917 0.351 -26.884 -1.708 3.610 0.324 O15 A97 40
A97 H1 H1 H 0 1 N N N N N N 25.215 2.214 -16.468 3.842 -5.154 1.459 H1 A97 41
A97 H2 H2 H 0 1 N N N N N N 23.743 3.244 -16.441 3.836 -6.625 0.457 H2 A97 42
A97 H3 H3 H 0 1 N N N N N N 22.362 -1.123 -16.221 2.082 -2.235 -0.716 H3 A97 43
A97 H4 H4 H 0 1 N N N N N N 24.095 -1.014 -15.761 2.076 -3.706 -1.719 H4 A97 44
A97 H5 H5 H 0 1 N N N N N N 23.054 2.302 -13.436 2.895 -5.422 -2.081 H5 A97 45
A97 H6 H6 H 0 1 N N N N N N 24.084 3.466 -14.336 4.489 -4.889 -2.666 H6 A97 46
A97 H7 H7 H 0 1 N N N N N N 22.427 3.094 -14.922 4.312 -6.483 -1.892 H7 A97 47
A97 H8 H8 H 0 1 N N N N N N 21.789 -1.311 -23.419 -0.393 -0.059 0.302 H8 A97 48
A97 H9 H9 H 0 1 N N N N N N 20.462 -1.397 -27.797 0.706 4.144 1.410 H9 A97 49
A97 H10 H10 H 0 1 N N N N N N 19.480 -2.338 -26.623 0.836 4.201 -0.364 H10 A97 50
A97 H11 H11 H 0 1 N N N N N N 21.442 -3.466 -19.616 -2.392 -5.729 -0.020 H11 A97 51
A97 H12 H12 H 0 1 N N N N N N 22.025 -2.650 -21.894 -3.492 -3.531 -0.034 H12 A97 52
A97 H13 H13 H 0 1 N N N N N N 21.903 1.062 -15.403 4.389 -2.905 -1.380 H13 A97 53
A97 H14 H14 H 0 1 N N N N N N 22.874 0.227 -14.144 4.165 -2.978 0.385 H14 A97 54
A97 H15 H15 H 0 1 N N N N N N 24.494 -0.476 -31.421 2.527 6.344 -3.754 H15 A97 55
A97 H16 H16 H 0 1 N N N N N N 22.788 -0.041 -31.068 2.772 4.667 -4.298 H16 A97 56
A97 H17 H17 H 0 1 N N N N N N 24.028 0.066 -29.773 1.243 5.135 -3.515 H17 A97 57
A97 H18 H18 H 0 1 N N N N N N 23.088 -2.511 -31.152 3.990 5.102 -2.183 H18 A97 58
A97 H19 H19 H 0 1 N N N N N N 24.329 -2.404 -29.857 2.461 5.570 -1.399 H19 A97 59
A97 H20 H20 H 0 1 N N N N N N 22.615 -1.366 -28.364 1.544 3.308 -1.837 H20 A97 60
A97 H21 H21 H 0 1 N N N N N N 21.388 -1.617 -29.652 3.073 2.841 -2.621 H21 A97 61
A97 H22 H22 H 0 1 N N N N N N 23.255 -4.556 -29.956 5.175 2.700 -1.275 H22 A97 62
A97 H23 H23 H 0 1 N N N N N N 22.387 -7.964 -28.507 7.123 2.907 1.101 H23 A97 63
A97 H24 H24 H 0 1 N N N N N N 22.515 -7.243 -30.148 6.629 1.331 1.765 H24 A97 64
A97 H25 H25 H 0 1 N N N N N N 23.884 -7.098 -28.993 6.825 1.534 0.008 H25 A97 65
A97 H27 H27 H 0 1 N N N N N N 24.163 1.730 -18.477 1.753 -5.883 -0.645 H27 A97 66
A97 H28 H28 H 0 1 N N N N N N 22.521 1.771 -17.750 1.530 -5.955 1.120 H28 A97 67
A97 H29 H29 H 0 1 N N N N N N 24.065 0.642 -20.046 0.385 -1.714 0.295 H29 A97 68
A97 H30 H30 H 0 1 N N N N N N 25.214 0.634 -21.667 -4.257 -1.873 -0.048 H30 A97 69
A97 H31 H31 H 0 1 N N N N N N 24.338 1.396 -27.032 -4.031 3.570 0.158 H31 A97 70
A97 H32 H32 H 0 1 N N N N N N 27.049 2.041 -22.441 -6.419 -1.206 -0.195 H32 A97 71
A97 H33 H33 H 0 1 N N N N N N 27.605 4.428 -22.970 -8.531 -0.562 0.933 H33 A97 72
A97 H34 H34 H 0 1 N N N N N N 26.839 4.245 -24.584 -7.120 -0.160 1.941 H34 A97 73
A97 H35 H35 H 0 1 N N N N N N 25.837 4.137 -23.097 -7.962 1.121 1.038 H35 A97 74
A97 H36 H36 H 0 1 N N N N N N 29.228 2.479 -23.568 -7.785 1.216 -1.453 H36 A97 75
A97 H37 H37 H 0 1 N N N N N N 28.517 0.951 -24.188 -6.817 0.002 -2.323 H37 A97 76
A97 H38 H38 H 0 1 N N N N N N 28.420 2.451 -25.172 -8.354 -0.467 -1.557 H38 A97 77
A97 H39 H39 H 0 1 N N N N N N 21.515 -2.325 -25.127 0.548 1.503 0.421 H39 A97 78
A97 H26 H26 H 0 1 N N N N N N 21.104 -6.732 -27.132 4.673 2.244 2.792 H26 A97 79
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
A97 C01 C02 SING N N 1
A97 C02 C03 SING N N 2
A97 C03 C04 SING N N 3
A97 C05 C04 SING N N 4
A97 C05 C06 DOUB N N 5
A97 C07 C06 SING N N 6
A97 C04 C11 DOUB N N 7
A97 C06 N08 SING N N 8
A97 C11 C09 SING N N 9
A97 C11 C12 SING N N 10
A97 N08 C09 SING N N 11
A97 C09 O10 DOUB N N 12
A97 C12 N13 SING N N 13
A97 O15 C14 DOUB N N 14
A97 C35 N36 DOUB Y N 15
A97 C35 C34 SING Y N 16
A97 C14 N13 SING N N 17
A97 C14 C16 SING N N 18
A97 N36 N37 SING Y N 19
A97 C34 C16 DOUB Y N 20
A97 C34 C33 SING Y N 21
A97 C16 C17 SING Y N 22
A97 N37 C33 SING Y N 23
A97 N37 C38 SING N N 24
A97 C40 C38 SING N N 25
A97 C33 C32 DOUB Y N 26
A97 C39 C38 SING N N 27
A97 C17 C18 DOUB Y N 28
A97 C32 C18 SING Y N 29
A97 C18 C19 SING N N 30
A97 C19 C20 DOUB Y N 31
A97 C19 C31 SING Y N 32
A97 C20 C21 SING Y N 33
A97 C31 C23 DOUB Y N 34
A97 C21 N22 DOUB Y N 35
A97 C23 N22 SING Y N 36
A97 C23 N24 SING N N 37
A97 C30 N24 SING N N 38
A97 C30 C29 SING N N 39
A97 N24 C25 SING N N 40
A97 C29 N27 SING N N 41
A97 C25 C26 SING N N 42
A97 C26 N27 SING N N 43
A97 N27 C28 SING N N 44
A97 C29 H1 SING N N 45
A97 C29 H2 SING N N 46
A97 C25 H3 SING N N 47
A97 C25 H4 SING N N 48
A97 C28 H5 SING N N 49
A97 C28 H6 SING N N 50
A97 C28 H7 SING N N 51
A97 C17 H8 SING N N 52
A97 C12 H9 SING N N 53
A97 C12 H10 SING N N 54
A97 C21 H11 SING N N 55
A97 C20 H12 SING N N 56
A97 C26 H13 SING N N 57
A97 C26 H14 SING N N 58
A97 C01 H15 SING N N 59
A97 C01 H16 SING N N 60
A97 C01 H17 SING N N 61
A97 C02 H18 SING N N 62
A97 C02 H19 SING N N 63
A97 C03 H20 SING N N 64
A97 C03 H21 SING N N 65
A97 C05 H22 SING N N 66
A97 C07 H23 SING N N 67
A97 C07 H24 SING N N 68
A97 C07 H25 SING N N 69
A97 C30 H27 SING N N 70
A97 C30 H28 SING N N 71
A97 C31 H29 SING N N 72
A97 C32 H30 SING N N 73
A97 C35 H31 SING N N 74
A97 C38 H32 SING N N 75
A97 C39 H33 SING N N 76
A97 C39 H34 SING N N 77
A97 C39 H35 SING N N 78
A97 C40 H36 SING N N 79
A97 C40 H37 SING N N 80
A97 C40 H38 SING N N 81
A97 N13 H39 SING N N 82
A97 N08 H26 SING N N 83
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
A97 SMILES ACDLabs 12.01 c4(c2ccnc(N1CCN(CC1)C)c2)cc(C(NCC3=C(CCC)C=C(NC3=O)C)=O)c5c(c4)n(C(C)C)nc5
A97 InChI InChI 1.03 InChI=1S/C31H39N7O2/c1-6-7-23-14-21(4)35-31(40)26(23)18-33-30(39)25-15-24(16-28-27(25)19-34-38(28)20(2)3)22-8-9-32-29(17-22)37-12-10-36(5)11-13-37/h8-9,14-17,19-20H,6-7,10-13,18H2,1-5H3,(H,33,39)(H,35,40)
A97 InChIKey InChI 1.03 ULNXAWLQFZMIHX-UHFFFAOYSA-N
A97 SMILES_CANONICAL CACTVS 3.385 CCCC1=C(CNC(=O)c2cc(cc3n(ncc23)C(C)C)c4ccnc(c4)N5CCN(C)CC5)C(=O)NC(=C1)C
A97 SMILES CACTVS 3.385 CCCC1=C(CNC(=O)c2cc(cc3n(ncc23)C(C)C)c4ccnc(c4)N5CCN(C)CC5)C(=O)NC(=C1)C
A97 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 CCCC1=C(C(=O)NC(=C1)C)CNC(=O)c2cc(cc3c2cnn3C(C)C)c4ccnc(c4)N5CCN(CC5)C
A97 SMILES "OpenEye OEToolkits" 2.0.6 CCCC1=C(C(=O)NC(=C1)C)CNC(=O)c2cc(cc3c2cnn3C(C)C)c4ccnc(c4)N5CCN(CC5)C
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
A97 "SYSTEMATIC NAME" ACDLabs 12.01 N-[(6-methyl-2-oxo-4-propyl-1,2-dihydropyridin-3-yl)methyl]-6-[2-(4-methylpiperazin-1-yl)pyridin-4-yl]-1-(propan-2-yl)-1H-indazole-4-carboxamide
A97 "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 ~{N}-[(6-methyl-2-oxidanylidene-4-propyl-1~{H}-pyridin-3-yl)methyl]-6-[2-(4-methylpiperazin-1-yl)pyridin-4-yl]-1-propan-2-yl-indazole-4-carboxamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
A97 'Create component' 2017-07-12 RCSB
A97 'Modify aromatic_flag' 2017-07-12 RCSB
A97 'Initial release' 2018-06-27 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
A97 C18 C 12.093 -4.125 1
A97 C29 C 5.598 -1.875 2
A97 C19 C 10.794 -4.875 3
A97 C25 C 5.598 -4.875 4
A97 C16 C 13.392 -1.875 5
A97 C28 C 3.000 -1.875 6
A97 C14 C 13.392 -0.375 7
A97 C17 C 12.093 -2.625 8
A97 C12 C 12.093 1.875 9
A97 C21 C 9.495 -7.125 10
A97 C20 C 10.794 -6.375 11
A97 C26 C 4.299 -4.125 12
A97 C23 C 8.196 -4.875 13
A97 C01 C 13.392 7.125 14
A97 C02 C 12.093 6.375 15
A97 C03 C 12.093 4.875 16
A97 C04 C 10.794 4.125 17
A97 C05 C 9.495 4.875 18
A97 C06 C 8.196 4.125 19
A97 C07 C 6.897 4.875 20
A97 C09 C 9.495 1.875 21
A97 C11 C 10.794 2.625 22
A97 C30 C 6.897 -2.625 23
A97 C31 C 9.495 -4.125 24
A97 C32 C 13.392 -4.875 25
A97 C33 C 14.691 -4.125 26
A97 C34 C 14.691 -2.625 27
A97 C35 C 16.111 -2.168 28
A97 C38 C 16.577 -6.008 29
A97 C39 C 15.575 -7.124 30
A97 C40 C 18.044 -6.317 31
A97 N08 N 8.196 2.625 32
A97 N13 N 12.093 0.375 33
A97 N22 N 8.196 -6.375 34
A97 N24 N 6.897 -4.125 35
A97 N27 N 4.299 -2.625 36
A97 N36 N 16.986 -3.375 37
A97 N37 N 16.111 -4.582 38
A97 O10 O 9.495 0.375 39
A97 O15 O 14.691 0.375 40
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
A97 C01 C02 SINGLE NONE 1
A97 C02 C03 SINGLE NONE 2
A97 C03 C04 SINGLE NONE 3
A97 C05 C04 SINGLE NONE 4
A97 C05 C06 DOUBLE NONE 5
A97 C07 C06 SINGLE NONE 6
A97 C04 C11 DOUBLE NONE 7
A97 C06 N08 SINGLE NONE 8
A97 C11 C09 SINGLE NONE 9
A97 C11 C12 SINGLE NONE 10
A97 N08 C09 SINGLE NONE 11
A97 C09 O10 DOUBLE NONE 12
A97 C12 N13 SINGLE NONE 13
A97 O15 C14 DOUBLE NONE 14
A97 C35 N36 DOUBLE NONE 15
A97 C35 C34 SINGLE NONE 16
A97 C14 N13 SINGLE NONE 17
A97 C14 C16 SINGLE NONE 18
A97 N36 N37 SINGLE NONE 19
A97 C34 C16 SINGLE NONE 20
A97 C34 C33 DOUBLE NONE 21
A97 C16 C17 DOUBLE NONE 22
A97 N37 C33 SINGLE NONE 23
A97 N37 C38 SINGLE NONE 24
A97 C40 C38 SINGLE NONE 25
A97 C33 C32 SINGLE NONE 26
A97 C39 C38 SINGLE NONE 27
A97 C17 C18 SINGLE NONE 28
A97 C32 C18 DOUBLE NONE 29
A97 C18 C19 SINGLE NONE 30
A97 C19 C20 SINGLE NONE 31
A97 C19 C31 DOUBLE NONE 32
A97 C20 C21 DOUBLE NONE 33
A97 C31 C23 SINGLE NONE 34
A97 C21 N22 SINGLE NONE 35
A97 C23 N22 DOUBLE NONE 36
A97 C23 N24 SINGLE NONE 37
A97 C30 N24 SINGLE NONE 38
A97 C30 C29 SINGLE NONE 39
A97 N24 C25 SINGLE NONE 40
A97 C29 N27 SINGLE NONE 41
A97 C25 C26 SINGLE NONE 42
A97 C26 N27 SINGLE NONE 43
A97 N27 C28 SINGLE NONE 44
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
A97 MurckoScaffold S1 scaffold 'O=C(NCc1ccc[nH]c1=O)c1cc(-c2ccnc(N3CCNCC3)c2)cc2[nH]ncc12' InChI=1S/C23H23N7O2/c31-22-16(2-1-4-26-22)13-27-23(32)18-10-17(11-20-19(18)14-28-29-20)15-3-5-25-21(12-15)30-8-6-24-7-9-30/h1-5,10-12,14,24H,6-9,13H2,(H,26,31)(H,27,32)(H,28,29) PZNRVRYRWHPBQJ-UHFFFAOYSA-N
A97 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
A97 phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
A97 piperazine F3 fragment C1CNCCN1 InChI=1S/C4H10N2/c1-2-6-4-3-5-1/h5-6H,1-4H2 GLUUGHFHXGJENI-UHFFFAOYSA-N
A97 pyrazole F4 fragment 'c1cn[nH]c1' InChI=1S/C3H4N2/c1-2-4-5-3-1/h1-3H,(H,4,5) WTKZEGDFNFYCGP-UHFFFAOYSA-N
A97 pyridine F5 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
A97 C18 S1 1
A97 C29 S1 1
A97 C19 S1 1
A97 C25 S1 1
A97 C16 S1 1
A97 C14 S1 1
A97 C17 S1 1
A97 C12 S1 1
A97 C21 S1 1
A97 C20 S1 1
A97 C26 S1 1
A97 C23 S1 1
A97 C04 S1 1
A97 C05 S1 1
A97 C06 S1 1
A97 C09 S1 1
A97 C11 S1 1
A97 C30 S1 1
A97 C31 S1 1
A97 C32 S1 1
A97 C33 S1 1
A97 C34 S1 1
A97 C35 S1 1
A97 N08 S1 1
A97 N13 S1 1
A97 N22 S1 1
A97 N24 S1 1
A97 N27 S1 1
A97 N36 S1 1
A97 N37 S1 1
A97 O10 S1 1
A97 O15 S1 1
A97 N13 F1 1
A97 C14 F1 1
A97 O15 F1 1
A97 C16 F1 1
A97 C18 F2 1
A97 C17 F2 1
A97 C16 F2 1
A97 C34 F2 1
A97 C33 F2 1
A97 C32 F2 1
A97 N24 F3 1
A97 C30 F3 1
A97 C29 F3 1
A97 N27 F3 1
A97 C26 F3 1
A97 C25 F3 1
A97 C33 F4 1
A97 C34 F4 1
A97 C35 F4 1
A97 N36 F4 1
A97 N37 F4 1
A97 C21 F5 1
A97 C20 F5 1
A97 C19 F5 1
A97 C31 F5 1
A97 C23 F5 1
A97 N22 F5 1
A97 C06 F5 2
A97 C05 F5 2
A97 C04 F5 2
A97 C11 F5 2
A97 C09 F5 2
A97 N08 F5 2
#
_pdbe_chem_comp_rdkit_properties.comp_id A97
_pdbe_chem_comp_rdkit_properties.exactmw 541.317
_pdbe_chem_comp_rdkit_properties.amw 541.700
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 13
_pdbe_chem_comp_rdkit_properties.NumHBD 2
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 40
_pdbe_chem_comp_rdkit_properties.NumAtoms 79
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 9
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.419
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 4
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 289.680
_pdbe_chem_comp_rdkit_properties.tpsa 99.150
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.802
_pdbe_chem_comp_rdkit_properties.CrippenMR 154.716
_pdbe_chem_comp_rdkit_properties.chi0v 19.447
_pdbe_chem_comp_rdkit_properties.chi1v 10.462
_pdbe_chem_comp_rdkit_properties.chi2v 4.845
_pdbe_chem_comp_rdkit_properties.chi3v 4.845
_pdbe_chem_comp_rdkit_properties.chi4v 3.179
_pdbe_chem_comp_rdkit_properties.chi0n 58.447
_pdbe_chem_comp_rdkit_properties.chi1n 29.857
_pdbe_chem_comp_rdkit_properties.chi2n 4.845
_pdbe_chem_comp_rdkit_properties.chi3n 4.845
_pdbe_chem_comp_rdkit_properties.chi4n 3.179
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.980
_pdbe_chem_comp_rdkit_properties.kappa1 7.075
_pdbe_chem_comp_rdkit_properties.kappa2 11.636
_pdbe_chem_comp_rdkit_properties.kappa3 5.651
_pdbe_chem_comp_rdkit_properties.Phi 2.058
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
A97 UniChem 'Guide to Pharmacology' 8240
A97 UniChem ChEBI 167693
A97 UniChem ZINC ZINC000095564006
A97 UniChem HMDB HMDB0252956
A97 UniChem 'PubChem TPHARMA' 163493645
A97 UniChem 'PubChem TPHARMA' 163513591
A97 UniChem Nikkaji J3.544.025I
A97 UniChem BindingDb 50400778
A97 UniChem ChemicalBook CB52666625
A97 UniChem MedChemExpress HY-13500
A97 UniChem 'Probes And Drugs' PD000032
A97 UniChem SureChEMBL SCHEMBL14716863
A97 UniChem PubChem 71268957
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
A97 C18 1.708 -1.465 0.093 ETKDGv3 1
A97 C29 5.612 3.854 1.616 ETKDGv3 2
A97 C19 3.041 -1.237 0.705 ETKDGv3 3
A97 C25 7.108 1.470 0.855 ETKDGv3 4
A97 C16 -0.570 -0.583 -0.384 ETKDGv3 5
A97 C28 7.255 4.419 -0.116 ETKDGv3 6
A97 C14 -1.614 0.465 -0.334 ETKDGv3 7
A97 C17 0.656 -0.394 0.156 ETKDGv3 8
A97 C12 -2.701 2.440 0.851 ETKDGv3 9
A97 C21 4.933 -2.110 1.974 ETKDGv3 10
A97 C20 3.727 -2.327 1.442 ETKDGv3 11
A97 C26 7.755 2.680 1.542 ETKDGv3 12
A97 C23 4.990 0.165 1.212 ETKDGv3 13
A97 C01 -5.706 0.626 -2.532 ETKDGv3 14
A97 C02 -5.939 2.106 -2.225 ETKDGv3 15
A97 C03 -5.012 2.638 -1.114 ETKDGv3 16
A97 C04 -5.130 1.939 0.242 ETKDGv3 17
A97 C05 -6.479 1.467 0.685 ETKDGv3 18
A97 C06 -6.665 0.823 1.845 ETKDGv3 19
A97 C07 -8.039 0.379 2.252 ETKDGv3 20
A97 C09 -4.277 1.151 2.405 ETKDGv3 21
A97 C11 -4.076 1.843 1.107 ETKDGv3 22
A97 C30 4.901 2.675 0.937 ETKDGv3 23
A97 C31 3.653 -0.044 0.596 ETKDGv3 24
A97 C32 1.427 -2.637 -0.518 ETKDGv3 25
A97 C33 0.094 -2.817 -1.115 ETKDGv3 26
A97 C34 -0.823 -1.876 -1.055 ETKDGv3 27
A97 C35 -2.044 -2.467 -1.608 ETKDGv3 28
A97 C38 0.089 -5.337 -1.646 ETKDGv3 29
A97 C39 -0.278 -5.984 -0.309 ETKDGv3 30
A97 C40 -0.420 -6.178 -2.820 ETKDGv3 31
A97 N08 -5.563 0.629 2.736 ETKDGv3 32
A97 N13 -1.689 1.387 0.765 ETKDGv3 33
A97 N22 5.560 -0.825 1.842 ETKDGv3 34
A97 N24 5.665 1.436 1.118 ETKDGv3 35
A97 N27 7.042 3.941 1.260 ETKDGv3 36
A97 N36 -1.809 -3.691 -1.966 ETKDGv3 37
A97 N37 -0.459 -3.981 -1.714 ETKDGv3 38
A97 O10 -3.326 1.024 3.223 ETKDGv3 39
A97 O15 -2.457 0.533 -1.267 ETKDGv3 40
A97 H1 5.525 3.737 2.719 ETKDGv3 41
A97 H2 5.091 4.802 1.357 ETKDGv3 42
A97 H3 7.605 0.551 1.233 ETKDGv3 43
A97 H4 7.281 1.511 -0.241 ETKDGv3 44
A97 H5 6.835 3.720 -0.868 ETKDGv3 45
A97 H6 8.341 4.544 -0.312 ETKDGv3 46
A97 H7 6.780 5.415 -0.250 ETKDGv3 47
A97 H8 0.898 0.544 0.639 ETKDGv3 48
A97 H9 -2.456 3.098 1.713 ETKDGv3 49
A97 H10 -2.630 3.104 -0.029 ETKDGv3 50
A97 H11 5.438 -2.899 2.514 ETKDGv3 51
A97 H12 3.255 -3.293 1.565 ETKDGv3 52
A97 H13 7.759 2.507 2.641 ETKDGv3 53
A97 H14 8.819 2.759 1.230 ETKDGv3 54
A97 H15 -4.657 0.460 -2.855 ETKDGv3 55
A97 H16 -6.381 0.309 -3.355 ETKDGv3 56
A97 H17 -5.920 -0.003 -1.644 ETKDGv3 57
A97 H18 -5.731 2.684 -3.152 ETKDGv3 58
A97 H19 -7.006 2.288 -1.987 ETKDGv3 59
A97 H20 -5.219 3.719 -0.966 ETKDGv3 60
A97 H21 -3.991 2.548 -1.528 ETKDGv3 61
A97 H22 -7.344 1.649 0.065 ETKDGv3 62
A97 H23 -7.980 -0.377 3.062 ETKDGv3 63
A97 H24 -8.618 1.253 2.618 ETKDGv3 64
A97 H25 -8.570 -0.078 1.390 ETKDGv3 65
A97 H27 4.767 2.875 -0.147 ETKDGv3 66
A97 H28 3.893 2.580 1.397 ETKDGv3 67
A97 H29 3.196 0.754 0.025 ETKDGv3 68
A97 H30 2.163 -3.427 -0.590 ETKDGv3 69
A97 H31 -3.016 -1.999 -1.683 ETKDGv3 70
A97 H32 1.197 -5.287 -1.724 ETKDGv3 71
A97 H33 0.157 -7.004 -0.244 ETKDGv3 72
A97 H34 -1.381 -6.052 -0.199 ETKDGv3 73
A97 H35 0.127 -5.377 0.528 ETKDGv3 74
A97 H36 -1.522 -6.304 -2.767 ETKDGv3 75
A97 H37 -0.161 -5.682 -3.780 ETKDGv3 76
A97 H38 0.056 -7.182 -2.805 ETKDGv3 77
A97 H39 -1.039 1.277 1.575 ETKDGv3 78
A97 H26 -5.702 0.140 3.649 ETKDGv3 79
#