data_A5Y
#
_chem_comp.id A5Y
_chem_comp.name
6-{[(3-fluorophenyl)methyl]sulfanyl}-2-(oxetan-3-yl)-5-phenyl-2,5-dihydro-4H-pyrazolo[3,4-d]pyrimidin-4-one
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C21 H17 F N4 O2 S"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2017-07-07
_chem_comp.pdbx_modified_date 2019-04-26
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 408.449
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code A5Y
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5WDV
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
A5Y N2 N1 N 0 1 N N N N N N 38.577 -16.244 16.090 -0.638 1.503 -0.040 N2 A5Y 1
A5Y C7 C1 C 0 1 Y N N N N N 34.697 -16.182 15.984 -4.059 -0.048 -0.130 C7 A5Y 2
A5Y C6 C2 C 0 1 Y N N N N N 36.105 -16.325 15.837 -2.733 0.310 -0.118 C6 A5Y 3
A5Y C5 C3 C 0 1 Y N N N N N 36.328 -17.161 14.654 -1.956 -0.935 -0.230 C5 A5Y 4
A5Y C3 C4 C 0 1 N N N N N N 38.672 -17.054 14.914 0.011 0.303 -0.153 C3 A5Y 5
A5Y C1 C5 C 0 1 N N N N N N 37.312 -15.850 16.572 -1.989 1.570 -0.014 C1 A5Y 6
A5Y C21 C6 C 0 1 Y N N N N N 42.449 -17.937 9.732 6.311 -2.140 -0.458 C21 A5Y 7
A5Y C20 C7 C 0 1 Y N N N N N 42.997 -18.210 10.983 5.647 -2.133 0.757 C20 A5Y 8
A5Y C19 C8 C 0 1 Y N N N N N 42.183 -18.505 12.062 4.281 -1.913 0.796 C19 A5Y 9
A5Y C18 C9 C 0 1 Y N N N N N 40.801 -18.527 11.919 3.581 -1.701 -0.377 C18 A5Y 10
A5Y C17 C10 C 0 1 N N N N N N 39.968 -18.837 13.143 2.094 -1.462 -0.335 C17 A5Y 11
A5Y C15 C11 C 0 1 Y N N N N N 40.057 -14.411 16.457 0.499 3.161 1.300 C15 A5Y 12
A5Y N4 N2 N 0 1 N N N N N N 37.567 -17.494 14.233 -0.600 -0.850 -0.243 N4 A5Y 13
A5Y C10 C12 C 0 1 Y N N N N N 39.683 -15.716 16.791 0.111 2.683 0.055 C10 A5Y 14
A5Y C14 C13 C 0 1 Y N N N N N 41.115 -13.778 17.108 1.238 4.325 1.391 C14 A5Y 15
A5Y C13 C14 C 0 1 Y N N N N N 41.800 -14.448 18.121 1.591 5.013 0.244 C13 A5Y 16
A5Y C12 C15 C 0 1 Y N N N N N 41.420 -15.748 18.471 1.207 4.538 -0.996 C12 A5Y 17
A5Y C11 C16 C 0 1 Y N N N N N 40.359 -16.373 17.805 0.468 3.376 -1.094 C11 A5Y 18
A5Y O25 O1 O 0 1 N N N N N N 37.215 -15.132 17.597 -2.565 2.637 0.091 O25 A5Y 19
A5Y N8 N3 N 0 1 Y N N N N N 34.131 -16.858 14.973 -4.120 -1.384 -0.239 N8 A5Y 20
A5Y C26 C17 C 0 1 N N N N N N 32.700 -17.081 14.616 -5.356 -2.170 -0.277 C26 A5Y 21
A5Y C28 C18 C 0 1 N N N N N N 31.765 -16.024 15.170 -5.917 -2.516 1.115 C28 A5Y 22
A5Y O29 O2 O 0 1 N N N N N N 31.420 -15.652 13.832 -7.201 -2.171 0.559 O29 A5Y 23
A5Y C27 C19 C 0 1 N N N N N N 32.270 -16.637 13.231 -6.628 -1.320 -0.455 C27 A5Y 24
A5Y N9 N4 N 0 1 Y N N N N N 35.105 -17.482 14.136 -2.826 -1.915 -0.299 N9 A5Y 25
A5Y S16 S1 S 0 1 N N N N N N 40.188 -17.523 14.321 1.773 0.312 -0.178 S16 A5Y 26
A5Y C23 C20 C 0 1 Y N N N N N 40.232 -18.248 10.673 4.246 -1.709 -1.589 C23 A5Y 27
A5Y C22 C21 C 0 1 Y N N N N N 41.059 -17.957 9.579 5.611 -1.922 -1.629 C22 A5Y 28
A5Y F24 F1 F 0 1 N N N N N N 44.314 -18.212 11.182 6.332 -2.342 1.903 F24 A5Y 29
A5Y H1 H1 H 0 1 N N N N N N 34.183 -15.635 16.760 -4.901 0.624 -0.057 H1 A5Y 30
A5Y H2 H2 H 0 1 N N N N N N 43.089 -17.713 8.891 7.377 -2.312 -0.490 H2 A5Y 31
A5Y H3 H3 H 0 1 N N N N N N 42.625 -18.720 13.024 3.762 -1.908 1.743 H3 A5Y 32
A5Y H4 H4 H 0 1 N N N N N N 38.907 -18.910 12.861 1.640 -1.834 -1.253 H4 A5Y 33
A5Y H5 H5 H 0 1 N N N N N N 40.296 -19.790 13.584 1.666 -1.986 0.520 H5 A5Y 34
A5Y H6 H6 H 0 1 N N N N N N 39.518 -13.885 15.683 0.220 2.627 2.196 H6 A5Y 35
A5Y H7 H7 H 0 1 N N N N N N 41.402 -12.775 16.829 1.540 4.698 2.358 H7 A5Y 36
A5Y H8 H8 H 0 1 N N N N N N 42.620 -13.966 18.633 2.168 5.923 0.318 H8 A5Y 37
A5Y H9 H9 H 0 1 N N N N N N 41.946 -16.270 19.256 1.484 5.078 -1.890 H9 A5Y 38
A5Y H10 H10 H 0 1 N N N N N N 40.066 -17.374 18.084 0.168 3.006 -2.063 H10 A5Y 39
A5Y H11 H11 H 0 1 N N N N N N 32.360 -18.101 14.850 -5.297 -3.023 -0.952 H11 A5Y 40
A5Y H12 H12 H 0 1 N N N N N N 32.268 -15.232 15.744 -5.819 -3.568 1.381 H12 A5Y 41
A5Y H13 H13 H 0 1 N N N N N N 30.926 -16.426 15.758 -5.581 -1.844 1.905 H13 A5Y 42
A5Y H14 H14 H 0 1 N N N N N N 31.734 -17.406 12.656 -6.512 -0.282 -0.144 H14 A5Y 43
A5Y H15 H15 H 0 1 N N N N N N 33.082 -16.220 12.618 -7.095 -1.424 -1.434 H15 A5Y 44
A5Y H16 H16 H 0 1 N N N N N N 39.159 -18.257 10.554 3.698 -1.543 -2.505 H16 A5Y 45
A5Y H17 H17 H 0 1 N N N N N N 40.621 -17.747 8.614 6.129 -1.927 -2.577 H17 A5Y 46
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
A5Y C22 C21 DOUB Y N 1
A5Y C22 C23 SING Y N 2
A5Y C21 C20 SING Y N 3
A5Y C23 C18 DOUB Y N 4
A5Y C20 F24 SING N N 5
A5Y C20 C19 DOUB Y N 6
A5Y C18 C19 SING Y N 7
A5Y C18 C17 SING N N 8
A5Y C17 S16 SING N N 9
A5Y C27 O29 SING N N 10
A5Y C27 C26 SING N N 11
A5Y O29 C28 SING N N 12
A5Y N9 C5 DOUB Y N 13
A5Y N9 N8 SING Y N 14
A5Y N4 C5 SING N N 15
A5Y N4 C3 DOUB N N 16
A5Y S16 C3 SING N N 17
A5Y C26 N8 SING N N 18
A5Y C26 C28 SING N N 19
A5Y C5 C6 SING Y N 20
A5Y C3 N2 SING N N 21
A5Y N8 C7 SING Y N 22
A5Y C6 C7 DOUB Y N 23
A5Y C6 C1 SING N N 24
A5Y N2 C1 SING N N 25
A5Y N2 C10 SING N N 26
A5Y C15 C10 DOUB Y N 27
A5Y C15 C14 SING Y N 28
A5Y C1 O25 DOUB N N 29
A5Y C10 C11 SING Y N 30
A5Y C14 C13 DOUB Y N 31
A5Y C11 C12 DOUB Y N 32
A5Y C13 C12 SING Y N 33
A5Y C7 H1 SING N N 34
A5Y C21 H2 SING N N 35
A5Y C19 H3 SING N N 36
A5Y C17 H4 SING N N 37
A5Y C17 H5 SING N N 38
A5Y C15 H6 SING N N 39
A5Y C14 H7 SING N N 40
A5Y C13 H8 SING N N 41
A5Y C12 H9 SING N N 42
A5Y C11 H10 SING N N 43
A5Y C26 H11 SING N N 44
A5Y C28 H12 SING N N 45
A5Y C28 H13 SING N N 46
A5Y C27 H14 SING N N 47
A5Y C27 H15 SING N N 48
A5Y C23 H16 SING N N 49
A5Y C22 H17 SING N N 50
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
A5Y SMILES ACDLabs 12.01 N3(C(c2cn(C1COC1)nc2N=C3SCc4cc(ccc4)F)=O)c5ccccc5
A5Y InChI InChI 1.03 InChI=1S/C21H17FN4O2S/c22-15-6-4-5-14(9-15)13-29-21-23-19-18(10-25(24-19)17-11-28-12-17)20(27)26(21)16-7-2-1-3-8-16/h1-10,17H,11-13H2
A5Y InChIKey InChI 1.03 IBYYWHNJSYBLSJ-UHFFFAOYSA-N
A5Y SMILES_CANONICAL CACTVS 3.385 Fc1cccc(CSC2=Nc3nn(cc3C(=O)N2c4ccccc4)C5COC5)c1
A5Y SMILES CACTVS 3.385 Fc1cccc(CSC2=Nc3nn(cc3C(=O)N2c4ccccc4)C5COC5)c1
A5Y SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 c1ccc(cc1)N2C(=O)c3cn(nc3N=C2SCc4cccc(c4)F)C5COC5
A5Y SMILES "OpenEye OEToolkits" 2.0.6 c1ccc(cc1)N2C(=O)c3cn(nc3N=C2SCc4cccc(c4)F)C5COC5
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
A5Y "SYSTEMATIC NAME" ACDLabs 12.01 6-{[(3-fluorophenyl)methyl]sulfanyl}-2-(oxetan-3-yl)-5-phenyl-2,5-dihydro-4H-pyrazolo[3,4-d]pyrimidin-4-one
A5Y "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 6-[(3-fluorophenyl)methylsulfanyl]-2-(oxetan-3-yl)-5-phenyl-pyrazolo[3,4-d]pyrimidin-4-one
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
A5Y 'Create component' 2017-07-07 RCSB
A5Y 'Initial release' 2019-05-01 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
A5Y N2 N 9.495 1.875 1
A5Y C7 C 13.513 2.332 2
A5Y C6 C 12.093 1.875 3
A5Y C5 C 12.093 0.375 4
A5Y C3 C 9.495 0.375 5
A5Y C1 C 10.794 2.625 6
A5Y C21 C 4.299 -4.125 7
A5Y C20 C 4.299 -2.625 8
A5Y C19 C 5.598 -1.875 9
A5Y C18 C 6.897 -2.625 10
A5Y C17 C 8.196 -1.875 11
A5Y C15 C 8.196 4.125 12
A5Y N4 N 10.794 -0.375 13
A5Y C10 C 8.196 2.625 14
A5Y C14 C 6.897 4.875 15
A5Y C13 C 5.598 4.125 16
A5Y C12 C 5.598 2.625 17
A5Y C11 C 6.897 1.875 18
A5Y O25 O 10.794 4.125 19
A5Y N8 N 14.388 1.125 20
A5Y C26 C 15.888 1.125 21
A5Y C28 C 16.949 0.064 22
A5Y O29 O 18.009 1.125 23
A5Y C27 C 16.949 2.186 24
A5Y N9 N 13.513 -0.082 25
A5Y S16 S 8.196 -0.375 26
A5Y C23 C 6.897 -4.125 27
A5Y C22 C 5.598 -4.875 28
A5Y F24 F 3.000 -1.875 29
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
A5Y C22 C21 DOUBLE NONE 1
A5Y C22 C23 SINGLE NONE 2
A5Y C21 C20 SINGLE NONE 3
A5Y C23 C18 DOUBLE NONE 4
A5Y C20 F24 SINGLE NONE 5
A5Y C20 C19 DOUBLE NONE 6
A5Y C18 C19 SINGLE NONE 7
A5Y C18 C17 SINGLE NONE 8
A5Y C17 S16 SINGLE NONE 9
A5Y C27 O29 SINGLE NONE 10
A5Y C27 C26 SINGLE NONE 11
A5Y O29 C28 SINGLE NONE 12
A5Y N9 C5 DOUBLE NONE 13
A5Y N9 N8 SINGLE NONE 14
A5Y N4 C5 SINGLE NONE 15
A5Y N4 C3 DOUBLE NONE 16
A5Y S16 C3 SINGLE NONE 17
A5Y C26 N8 SINGLE NONE 18
A5Y C26 C28 SINGLE NONE 19
A5Y C5 C6 SINGLE NONE 20
A5Y C3 N2 SINGLE NONE 21
A5Y N8 C7 SINGLE NONE 22
A5Y C6 C7 DOUBLE NONE 23
A5Y C6 C1 SINGLE NONE 24
A5Y N2 C1 SINGLE NONE 25
A5Y N2 C10 SINGLE NONE 26
A5Y C15 C10 DOUBLE NONE 27
A5Y C15 C14 SINGLE NONE 28
A5Y C1 O25 DOUBLE NONE 29
A5Y C10 C11 SINGLE NONE 30
A5Y C14 C13 DOUBLE NONE 31
A5Y C11 C12 DOUBLE NONE 32
A5Y C13 C12 SINGLE NONE 33
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
A5Y MurckoScaffold S1 scaffold O=c1c2cn(C3COC3)nc2nc(SCc2ccccc2)n1-c1ccccc1 InChI=1S/C21H18N4O2S/c26-20-18-11-24(17-12-27-13-17)23-19(18)22-21(25(20)16-9-5-2-6-10-16)28-14-15-7-3-1-4-8-15/h1-11,17H,12-14H2 SBAWYPHAAHZRMW-UHFFFAOYSA-N
A5Y phenyl F1 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
A5Y pyrazole F2 fragment 'c1cn[nH]c1' InChI=1S/C3H4N2/c1-2-4-5-3-1/h1-3H,(H,4,5) WTKZEGDFNFYCGP-UHFFFAOYSA-N
A5Y pyrimidine F3 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
A5Y N2 S1 1
A5Y C7 S1 1
A5Y C6 S1 1
A5Y C5 S1 1
A5Y C3 S1 1
A5Y C1 S1 1
A5Y C21 S1 1
A5Y C20 S1 1
A5Y C19 S1 1
A5Y C18 S1 1
A5Y C17 S1 1
A5Y C15 S1 1
A5Y N4 S1 1
A5Y C10 S1 1
A5Y C14 S1 1
A5Y C13 S1 1
A5Y C12 S1 1
A5Y C11 S1 1
A5Y O25 S1 1
A5Y N8 S1 1
A5Y C26 S1 1
A5Y C28 S1 1
A5Y O29 S1 1
A5Y C27 S1 1
A5Y N9 S1 1
A5Y S16 S1 1
A5Y C23 S1 1
A5Y C22 S1 1
A5Y C21 F1 1
A5Y C22 F1 1
A5Y C23 F1 1
A5Y C18 F1 1
A5Y C19 F1 1
A5Y C20 F1 1
A5Y C15 F1 2
A5Y C10 F1 2
A5Y C11 F1 2
A5Y C12 F1 2
A5Y C13 F1 2
A5Y C14 F1 2
A5Y C7 F2 1
A5Y C6 F2 1
A5Y C5 F2 1
A5Y N9 F2 1
A5Y N8 F2 1
A5Y C6 F3 1
A5Y C5 F3 1
A5Y N4 F3 1
A5Y C3 F3 1
A5Y N2 F3 1
A5Y C1 F3 1
#
_pdbe_chem_comp_rdkit_properties.comp_id A5Y
_pdbe_chem_comp_rdkit_properties.exactmw 408.106
_pdbe_chem_comp_rdkit_properties.amw 408.458
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 6
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 0
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 5
_pdbe_chem_comp_rdkit_properties.NumHBD 0
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 29
_pdbe_chem_comp_rdkit_properties.NumAtoms 46
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 8
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.190
_pdbe_chem_comp_rdkit_properties.NumRings 5
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 193.386
_pdbe_chem_comp_rdkit_properties.tpsa 61.940
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.704
_pdbe_chem_comp_rdkit_properties.CrippenMR 106.487
_pdbe_chem_comp_rdkit_properties.chi0v 14.708
_pdbe_chem_comp_rdkit_properties.chi1v 8.515
_pdbe_chem_comp_rdkit_properties.chi2v 4.265
_pdbe_chem_comp_rdkit_properties.chi3v 4.265
_pdbe_chem_comp_rdkit_properties.chi4v 2.958
_pdbe_chem_comp_rdkit_properties.chi0n 30.892
_pdbe_chem_comp_rdkit_properties.chi1n 16.198
_pdbe_chem_comp_rdkit_properties.chi2n 3.502
_pdbe_chem_comp_rdkit_properties.chi3n 3.502
_pdbe_chem_comp_rdkit_properties.chi4n 2.265
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -2.970
_pdbe_chem_comp_rdkit_properties.kappa1 7.373
_pdbe_chem_comp_rdkit_properties.kappa2 7.455
_pdbe_chem_comp_rdkit_properties.kappa3 3.450
_pdbe_chem_comp_rdkit_properties.Phi 1.895
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
A5Y UniChem SureChEMBL SCHEMBL19745626
A5Y UniChem PubChem 132258507
A5Y UniChem BindingDb 50459588
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
A5Y N2 -0.251 1.818 -0.368 ETKDGv3 1
A5Y C7 -2.781 -0.946 -0.080 ETKDGv3 2
A5Y C6 -1.844 -0.025 0.044 ETKDGv3 3
A5Y C5 -1.020 -0.410 1.142 ETKDGv3 4
A5Y C3 0.554 1.327 0.751 ETKDGv3 5
A5Y C1 -1.460 1.122 -0.755 ETKDGv3 6
A5Y C21 2.845 -3.107 0.756 ETKDGv3 7
A5Y C20 2.047 -2.530 -0.345 ETKDGv3 8
A5Y C19 2.142 -1.225 -0.629 ETKDGv3 9
A5Y C18 3.038 -0.349 0.168 ETKDGv3 10
A5Y C17 3.083 1.129 -0.108 ETKDGv3 11
A5Y C15 0.477 2.919 -2.390 ETKDGv3 12
A5Y N4 0.185 0.284 1.452 ETKDGv3 13
A5Y C10 0.151 2.995 -1.088 ETKDGv3 14
A5Y C14 0.899 4.131 -3.123 ETKDGv3 15
A5Y C13 0.956 5.310 -2.492 ETKDGv3 16
A5Y C12 0.594 5.402 -1.062 ETKDGv3 17
A5Y C11 0.211 4.305 -0.396 ETKDGv3 18
A5Y O25 -2.158 1.499 -1.735 ETKDGv3 19
A5Y N8 -2.569 -1.901 0.965 ETKDGv3 20
A5Y C26 -3.092 -3.265 0.962 ETKDGv3 21
A5Y C28 -3.285 -3.827 2.352 ETKDGv3 22
A5Y O29 -4.686 -3.849 2.223 ETKDGv3 23
A5Y C27 -4.602 -3.320 0.921 ETKDGv3 24
A5Y N9 -1.408 -1.523 1.663 ETKDGv3 25
A5Y S16 2.143 2.074 1.146 ETKDGv3 26
A5Y C23 3.756 -0.880 1.174 ETKDGv3 27
A5Y C22 3.658 -2.324 1.476 ETKDGv3 28
A5Y F24 1.216 -3.324 -1.064 ETKDGv3 29
A5Y H1 -3.525 -1.014 -0.863 ETKDGv3 30
A5Y H2 2.770 -4.163 0.981 ETKDGv3 31
A5Y H3 1.547 -0.807 -1.432 ETKDGv3 32
A5Y H4 4.137 1.478 -0.095 ETKDGv3 33
A5Y H5 2.678 1.350 -1.118 ETKDGv3 34
A5Y H6 0.446 1.968 -2.909 ETKDGv3 35
A5Y H7 1.164 4.061 -4.170 ETKDGv3 36
A5Y H8 1.266 6.198 -3.027 ETKDGv3 37
A5Y H9 0.638 6.357 -0.556 ETKDGv3 38
A5Y H10 -0.058 4.377 0.650 ETKDGv3 39
A5Y H11 -2.577 -3.947 0.251 ETKDGv3 40
A5Y H12 -2.877 -4.856 2.457 ETKDGv3 41
A5Y H13 -2.973 -3.143 3.172 ETKDGv3 42
A5Y H14 -5.096 -2.325 0.865 ETKDGv3 43
A5Y H15 -4.982 -4.046 0.170 ETKDGv3 44
A5Y H16 4.400 -0.257 1.781 ETKDGv3 45
A5Y H17 4.241 -2.744 2.285 ETKDGv3 46
#