data_9UD
#
_chem_comp.id 9UD
_chem_comp.name
1-{3-[7-(difluoromethyl)-6-(1-methyl-1H-pyrazol-4-yl)-3,4-dihydroquinolin-1(2H)-yl]-1-(oxan-4-yl)-1,4,6,7-tetrahydro-5H-pyrazolo[4,3-c]pyridin-5-yl}ethan-1-one
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C27 H32 F2 N6 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2017-06-09
_chem_comp.pdbx_modified_date 2018-03-02
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 510.579
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 9UD
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5W0L
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site RCSB
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
9UD C4 C1 C 0 1 Y N N N N N -32.746 -31.286 -0.165 3.404 -0.159 0.394 C4 9UD 1
9UD C5 C2 C 0 1 Y N N N N N -34.001 -31.223 -0.759 3.267 0.411 1.657 C5 9UD 2
9UD C6 C3 C 0 1 Y N N N N N -35.014 -30.422 -0.243 2.013 0.580 2.212 C6 9UD 3
9UD N1 N1 N 0 1 Y N N N N N -29.792 -33.006 -1.584 6.431 -0.191 -1.614 N1 9UD 4
9UD C7 C4 C 0 1 Y N N N N N -34.758 -29.655 0.899 0.888 0.182 1.503 C7 9UD 5
9UD C8 C5 C 0 1 Y N N N N N -33.499 -29.720 1.493 1.022 -0.389 0.241 C8 9UD 6
9UD N2 N2 N 0 1 N N N N N N -35.784 -28.828 1.428 -0.394 0.349 2.041 N2 9UD 7
9UD C9 C6 C 0 1 Y N N N N N -32.483 -30.519 0.976 2.272 -0.560 -0.313 C9 9UD 8
9UD C10 C7 C 0 1 N N N N N N -31.125 -30.518 1.662 2.415 -1.180 -1.679 C10 9UD 9
9UD C11 C8 C 0 1 N N N N N N -36.960 -28.566 0.581 -0.530 0.664 3.469 C11 9UD 10
9UD C12 C9 C 0 1 N N N N N N -37.440 -29.865 -0.013 0.498 1.751 3.809 C12 9UD 11
9UD N3 N3 N 0 1 Y N N N N N -35.357 -28.967 3.763 -2.248 -0.872 1.076 N3 9UD 12
9UD C13 C10 C 0 1 N N N N N N -36.364 -30.404 -0.913 1.902 1.191 3.585 C13 9UD 13
9UD C14 C11 C 0 1 Y N N N N N -35.657 -28.262 2.700 -1.528 0.218 1.230 C14 9UD 14
9UD C15 C12 C 0 1 N N N N N N -34.982 -28.507 6.151 -4.326 -1.523 -0.259 C15 9UD 15
9UD N4 N4 N 0 1 Y N N N N N -35.285 -28.047 4.785 -3.291 -0.586 0.184 N4 9UD 16
9UD N N5 N 0 1 Y N N N N N -30.731 -33.974 -1.542 6.837 -0.937 -0.501 N 9UD 17
9UD C C13 C 0 1 N N N N N N -30.393 -35.322 -1.981 8.161 -1.529 -0.299 C 9UD 18
9UD O O1 O 0 1 N N N N N N -34.749 -30.670 7.991 -5.468 -4.132 -0.186 O 9UD 19
9UD C1 C14 C 0 1 Y N N N N N -31.903 -33.542 -1.059 5.797 -1.015 0.355 C1 9UD 20
9UD C16 C15 C 0 1 N N N N N N -33.798 -29.454 6.133 -5.114 -2.030 0.952 C16 9UD 21
9UD C17 C16 C 0 1 N N N N N N -33.579 -30.006 7.517 -6.140 -3.066 0.487 C17 9UD 22
9UD C18 C17 C 0 1 N N N N N N -35.829 -29.742 8.114 -4.753 -3.725 -1.355 C18 9UD 23
9UD C19 C18 C 0 1 N N N N N N -36.206 -29.171 6.769 -3.671 -2.715 -0.964 C19 9UD 24
9UD C2 C19 C 0 1 Y N N N N N -31.740 -32.212 -0.751 4.753 -0.335 -0.200 C2 9UD 25
9UD C20 C20 C 0 1 Y N N N N N -35.540 -26.792 4.369 -3.175 0.700 -0.194 C20 9UD 26
9UD C21 C21 C 0 1 Y N N N N N -35.799 -26.845 3.029 -2.095 1.222 0.440 C21 9UD 27
9UD C22 C22 C 0 1 N N N N N N -36.164 -25.628 2.225 -1.637 2.652 0.284 C22 9UD 28
9UD C23 C23 C 0 1 N N N N N N -36.291 -24.482 4.444 -3.830 2.967 -0.936 C23 9UD 29
9UD C24 C24 C 0 1 N N N N N N -35.536 -25.556 5.209 -4.057 1.465 -1.148 C24 9UD 30
9UD C25 C25 C 0 1 N N N N N N -35.352 -23.281 2.574 -1.763 3.979 -1.778 C25 9UD 31
9UD C26 C26 C 0 1 N N N N N N -35.107 -23.149 1.094 -0.308 4.335 -1.607 C26 9UD 32
9UD C3 C27 C 0 1 Y N N N N N -30.404 -31.937 -1.109 5.188 0.171 -1.441 C3 9UD 33
9UD F F1 F 0 1 N N N N N N -31.204 -29.913 2.876 3.506 -2.056 -1.682 F 9UD 34
9UD F1 F2 F 0 1 N N N N N N -30.771 -31.811 1.891 1.249 -1.885 -1.995 F1 9UD 35
9UD N5 N6 N 0 1 N N N N N N -35.882 -24.440 3.034 -2.386 3.229 -0.847 N5 9UD 36
9UD O1 O2 O 0 1 N N N N N N -35.057 -22.381 3.356 -2.372 4.368 -2.751 O1 9UD 37
9UD H1 H1 H 0 1 N N N N N N -34.194 -31.811 -1.644 4.145 0.721 2.205 H1 9UD 38
9UD H2 H2 H 0 1 N N N N N N -33.306 -29.134 2.379 0.144 -0.699 -0.305 H2 9UD 39
9UD H3 H3 H 0 1 N N N N N N -30.396 -30.014 1.011 2.577 -0.395 -2.419 H3 9UD 40
9UD H4 H4 H 0 1 N N N N N N -36.685 -27.871 -0.226 -1.536 1.031 3.672 H4 9UD 41
9UD H5 H5 H 0 1 N N N N N N -37.761 -28.122 1.190 -0.336 -0.228 4.064 H5 9UD 42
9UD H6 H6 H 0 1 N N N N N N -38.357 -29.691 -0.595 0.342 2.616 3.164 H6 9UD 43
9UD H7 H7 H 0 1 N N N N N N -37.647 -30.587 0.791 0.383 2.048 4.852 H7 9UD 44
9UD H8 H8 H 0 1 N N N N N N -36.305 -29.772 -1.811 2.109 0.429 4.336 H8 9UD 45
9UD H9 H9 H 0 1 N N N N N N -36.628 -31.431 -1.204 2.630 1.997 3.680 H9 9UD 46
9UD H10 H10 H 0 1 N N N N N N -34.717 -27.636 6.768 -5.003 -1.019 -0.949 H10 9UD 47
9UD H11 H11 H 0 1 N N N N N N -29.342 -35.350 -2.306 8.805 -0.814 0.213 H11 9UD 48
9UD H12 H12 H 0 1 N N N N N N -30.538 -36.026 -1.148 8.068 -2.431 0.305 H12 9UD 49
9UD H13 H13 H 0 1 N N N N N N -31.044 -35.608 -2.821 8.596 -1.783 -1.266 H13 9UD 50
9UD H14 H14 H 0 1 N N N N N N -32.803 -34.126 -0.935 5.792 -1.524 1.308 H14 9UD 51
9UD H15 H15 H 0 1 N N N N N N -34.000 -30.281 5.436 -4.429 -2.490 1.665 H15 9UD 52
9UD H16 H16 H 0 1 N N N N N N -32.898 -28.911 5.808 -5.629 -1.195 1.428 H16 9UD 53
9UD H17 H17 H 0 1 N N N N N N -32.744 -30.722 7.491 -6.849 -2.595 -0.194 H17 9UD 54
9UD H18 H18 H 0 1 N N N N N N -33.332 -29.179 8.200 -6.674 -3.462 1.351 H18 9UD 55
9UD H19 H19 H 0 1 N N N N N N -35.525 -28.922 8.781 -4.288 -4.595 -1.818 H19 9UD 56
9UD H20 H20 H 0 1 N N N N N N -36.700 -30.259 8.543 -5.444 -3.263 -2.061 H20 9UD 57
9UD H21 H21 H 0 1 N N N N N N -37.005 -28.426 6.896 -3.154 -2.370 -1.859 H21 9UD 58
9UD H22 H22 H 0 1 N N N N N N -36.559 -29.979 6.111 -2.957 -3.189 -0.290 H22 9UD 59
9UD H23 H23 H 0 1 N N N N N N -35.567 -25.599 1.302 -1.851 3.212 1.194 H23 9UD 60
9UD H24 H24 H 0 1 N N N N N N -37.233 -25.658 1.969 -0.568 2.678 0.073 H24 9UD 61
9UD H25 H25 H 0 1 N N N N N N -36.087 -23.504 4.905 -4.251 3.521 -1.775 H25 9UD 62
9UD H26 H26 H 0 1 N N N N N N -37.369 -24.695 4.498 -4.316 3.281 -0.012 H26 9UD 63
9UD H27 H27 H 0 1 N N N N N N -36.034 -25.753 6.170 -3.803 1.199 -2.174 H27 9UD 64
9UD H28 H28 H 0 1 N N N N N N -34.502 -25.230 5.392 -5.102 1.222 -0.954 H28 9UD 65
9UD H29 H29 H 0 1 N N N N N N -34.652 -22.170 0.883 0.077 3.866 -0.702 H29 9UD 66
9UD H30 H30 H 0 1 N N N N N N -34.428 -23.948 0.762 0.256 3.980 -2.470 H30 9UD 67
9UD H31 H31 H 0 1 N N N N N N -36.062 -23.233 0.555 -0.206 5.417 -1.528 H31 9UD 68
9UD H32 H32 H 0 1 N N N N N N -29.938 -30.968 -1.007 4.596 0.757 -2.129 H32 9UD 69
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
9UD C N SING N N 1
9UD N1 N SING Y N 2
9UD N1 C3 DOUB Y N 3
9UD N C1 SING Y N 4
9UD C3 C2 SING Y N 5
9UD C1 C2 DOUB Y N 6
9UD C13 C6 SING N N 7
9UD C13 C12 SING N N 8
9UD C5 C6 DOUB Y N 9
9UD C5 C4 SING Y N 10
9UD C2 C4 SING N N 11
9UD C6 C7 SING Y N 12
9UD C4 C9 DOUB Y N 13
9UD C12 C11 SING N N 14
9UD C11 N2 SING N N 15
9UD C7 N2 SING N N 16
9UD C7 C8 DOUB Y N 17
9UD C9 C8 SING Y N 18
9UD C9 C10 SING N N 19
9UD C26 C25 SING N N 20
9UD N2 C14 SING N N 21
9UD C10 F1 SING N N 22
9UD C10 F SING N N 23
9UD C22 C21 SING N N 24
9UD C22 N5 SING N N 25
9UD C25 N5 SING N N 26
9UD C25 O1 DOUB N N 27
9UD C14 C21 SING Y N 28
9UD C14 N3 DOUB Y N 29
9UD C21 C20 DOUB Y N 30
9UD N5 C23 SING N N 31
9UD N3 N4 SING Y N 32
9UD C20 N4 SING Y N 33
9UD C20 C24 SING N N 34
9UD C23 C24 SING N N 35
9UD N4 C15 SING N N 36
9UD C16 C15 SING N N 37
9UD C16 C17 SING N N 38
9UD C15 C19 SING N N 39
9UD C19 C18 SING N N 40
9UD C17 O SING N N 41
9UD O C18 SING N N 42
9UD C5 H1 SING N N 43
9UD C8 H2 SING N N 44
9UD C10 H3 SING N N 45
9UD C11 H4 SING N N 46
9UD C11 H5 SING N N 47
9UD C12 H6 SING N N 48
9UD C12 H7 SING N N 49
9UD C13 H8 SING N N 50
9UD C13 H9 SING N N 51
9UD C15 H10 SING N N 52
9UD C H11 SING N N 53
9UD C H12 SING N N 54
9UD C H13 SING N N 55
9UD C1 H14 SING N N 56
9UD C16 H15 SING N N 57
9UD C16 H16 SING N N 58
9UD C17 H17 SING N N 59
9UD C17 H18 SING N N 60
9UD C18 H19 SING N N 61
9UD C18 H20 SING N N 62
9UD C19 H21 SING N N 63
9UD C19 H22 SING N N 64
9UD C22 H23 SING N N 65
9UD C22 H24 SING N N 66
9UD C23 H25 SING N N 67
9UD C23 H26 SING N N 68
9UD C24 H27 SING N N 69
9UD C24 H28 SING N N 70
9UD C26 H29 SING N N 71
9UD C26 H30 SING N N 72
9UD C26 H31 SING N N 73
9UD C3 H32 SING N N 74
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
9UD SMILES ACDLabs 12.01 c1(c(cc2c(c1)CCCN2c4nn(C3CCOCC3)c5CCN(Cc45)C(=O)C)C(F)F)c6cn(nc6)C
9UD InChI InChI 1.03 InChI=1S/C27H32F2N6O2/c1-17(36)33-9-5-24-23(16-33)27(31-35(24)20-6-10-37-11-7-20)34-8-3-4-18-12-21(19-14-30-32(2)15-19)22(26(28)29)13-25(18)34/h12-15,20,26H,3-11,16H2,1-2H3
9UD InChIKey InChI 1.03 LWXLECMNBTVASW-UHFFFAOYSA-N
9UD SMILES_CANONICAL CACTVS 3.385 Cn1cc(cn1)c2cc3CCCN(c3cc2C(F)F)c4nn(C5CCOCC5)c6CCN(Cc46)C(C)=O
9UD SMILES CACTVS 3.385 Cn1cc(cn1)c2cc3CCCN(c3cc2C(F)F)c4nn(C5CCOCC5)c6CCN(Cc46)C(C)=O
9UD SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 CC(=O)N1CCc2c(c(nn2C3CCOCC3)N4CCCc5c4cc(c(c5)c6cnn(c6)C)C(F)F)C1
9UD SMILES "OpenEye OEToolkits" 2.0.6 CC(=O)N1CCc2c(c(nn2C3CCOCC3)N4CCCc5c4cc(c(c5)c6cnn(c6)C)C(F)F)C1
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
9UD "SYSTEMATIC NAME" ACDLabs 12.01 1-{3-[7-(difluoromethyl)-6-(1-methyl-1H-pyrazol-4-yl)-3,4-dihydroquinolin-1(2H)-yl]-1-(oxan-4-yl)-1,4,6,7-tetrahydro-5H-pyrazolo[4,3-c]pyridin-5-yl}ethan-1-one
9UD "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 1-[3-[7-[bis(fluoranyl)methyl]-6-(1-methylpyrazol-4-yl)-3,4-dihydro-2~{H}-quinolin-1-yl]-1-(oxan-4-yl)-6,7-dihydro-4~{H}-pyrazolo[4,3-c]pyridin-5-yl]ethanone
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
9UD 'Create component' 2017-06-09 RCSB
9UD 'Initial release' 2018-03-07 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
9UD C4 C 6.673 2.972 1
9UD C5 C 7.972 3.722 2
9UD C6 C 9.271 2.972 3
9UD N1 N 3.000 4.226 4
9UD C7 C 9.271 1.472 5
9UD C8 C 7.972 0.722 6
9UD N2 N 10.612 0.670 7
9UD C9 C 6.673 1.472 8
9UD C10 C 5.374 0.722 9
9UD C11 C 11.971 1.440 10
9UD C12 C 11.971 3.003 11
9UD N3 N 9.377 -1.692 12
9UD C13 C 10.612 3.774 13
9UD C14 C 10.595 -0.830 14
9UD C15 C 8.918 -4.316 15
9UD N4 N 9.818 -3.116 16
9UD N N 3.750 5.525 17
9UD C C 3.140 6.896 18
9UD O O 7.119 -6.716 19
9UD C1 C 5.217 5.213 20
9UD C16 C 7.429 -4.137 21
9UD C17 C 6.529 -5.337 22
9UD C18 C 8.608 -6.896 23
9UD C19 C 9.508 -5.696 24
9UD C2 C 5.374 3.722 25
9UD C20 C 11.309 -3.140 26
9UD C21 C 11.792 -1.720 27
9UD C22 C 13.263 -1.427 28
9UD C23 C 13.769 -3.975 29
9UD C24 C 12.298 -4.268 30
9UD C25 C 15.723 -2.263 31
9UD C26 C 16.205 -0.842 32
9UD C3 C 4.004 3.112 33
9UD F F 5.374 -0.778 34
9UD F1 F 4.075 1.472 35
9UD N5 N 14.252 -2.555 36
9UD O1 O 16.712 -3.391 37
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
9UD C N SINGLE NONE 1
9UD N1 N SINGLE NONE 2
9UD N1 C3 DOUBLE NONE 3
9UD N C1 SINGLE NONE 4
9UD C3 C2 SINGLE NONE 5
9UD C1 C2 DOUBLE NONE 6
9UD C13 C6 SINGLE NONE 7
9UD C13 C12 SINGLE NONE 8
9UD C5 C6 DOUBLE NONE 9
9UD C5 C4 SINGLE NONE 10
9UD C2 C4 SINGLE NONE 11
9UD C6 C7 SINGLE NONE 12
9UD C4 C9 DOUBLE NONE 13
9UD C12 C11 SINGLE NONE 14
9UD C11 N2 SINGLE NONE 15
9UD C7 N2 SINGLE NONE 16
9UD C7 C8 DOUBLE NONE 17
9UD C9 C8 SINGLE NONE 18
9UD C9 C10 SINGLE NONE 19
9UD C26 C25 SINGLE NONE 20
9UD N2 C14 SINGLE NONE 21
9UD C10 F1 SINGLE NONE 22
9UD C10 F SINGLE NONE 23
9UD C22 C21 SINGLE NONE 24
9UD C22 N5 SINGLE NONE 25
9UD C25 N5 SINGLE NONE 26
9UD C25 O1 DOUBLE NONE 27
9UD C14 C21 SINGLE NONE 28
9UD C14 N3 DOUBLE NONE 29
9UD C21 C20 DOUBLE NONE 30
9UD N5 C23 SINGLE NONE 31
9UD N3 N4 SINGLE NONE 32
9UD C20 N4 SINGLE NONE 33
9UD C20 C24 SINGLE NONE 34
9UD C23 C24 SINGLE NONE 35
9UD N4 C15 SINGLE NONE 36
9UD C16 C15 SINGLE NONE 37
9UD C16 C17 SINGLE NONE 38
9UD C15 C19 SINGLE NONE 39
9UD C19 C18 SINGLE NONE 40
9UD C17 O SINGLE NONE 41
9UD O C18 SINGLE NONE 42
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
9UD MurckoScaffold S1 scaffold 'c1cc2c(cc1-c1cn[nH]c1)CCCN2c1nn(C2CCOCC2)c2c1CNCC2' InChI=1S/C23H28N6O/c1-2-17-12-16(18-13-25-26-14-18)3-4-21(17)28(9-1)23-20-15-24-8-5-22(20)29(27-23)19-6-10-30-11-7-19/h3-4,12-14,19,24H,1-2,5-11,15H2,(H,25,26) AFJIPEYMVVVUQJ-UHFFFAOYSA-N
9UD amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
9UD phenyl F2 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
9UD pyrazole F3 fragment 'c1cn[nH]c1' InChI=1S/C3H4N2/c1-2-4-5-3-1/h1-3H,(H,4,5) WTKZEGDFNFYCGP-UHFFFAOYSA-N
9UD Z383325512 F4 fragment 'CC(=O)NCc1cn[nH]c1' InChI=1S/C6H9N3O/c1-5(10)7-2-6-3-8-9-4-6/h3-4H,2H2,1H3,(H,7,10)(H,8,9) VFAFDDVJGKOBTH-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
9UD C4 S1 1
9UD C5 S1 1
9UD C6 S1 1
9UD N1 S1 1
9UD C7 S1 1
9UD C8 S1 1
9UD N2 S1 1
9UD C9 S1 1
9UD C11 S1 1
9UD C12 S1 1
9UD N3 S1 1
9UD C13 S1 1
9UD C14 S1 1
9UD C15 S1 1
9UD N4 S1 1
9UD N S1 1
9UD O S1 1
9UD C1 S1 1
9UD C16 S1 1
9UD C17 S1 1
9UD C18 S1 1
9UD C19 S1 1
9UD C2 S1 1
9UD C20 S1 1
9UD C21 S1 1
9UD C22 S1 1
9UD C23 S1 1
9UD C24 S1 1
9UD C3 S1 1
9UD N5 S1 1
9UD N5 F1 1
9UD C25 F1 1
9UD O1 F1 1
9UD C26 F1 1
9UD C4 F2 1
9UD C5 F2 1
9UD C6 F2 1
9UD C7 F2 1
9UD C8 F2 1
9UD C9 F2 1
9UD C14 F3 1
9UD C21 F3 1
9UD C20 F3 1
9UD N4 F3 1
9UD N3 F3 1
9UD C1 F3 2
9UD C2 F3 2
9UD C3 F3 2
9UD N1 F3 2
9UD N F3 2
9UD C26 F4 1
9UD C25 F4 1
9UD O1 F4 1
9UD N5 F4 1
9UD C22 F4 1
9UD C21 F4 1
9UD C14 F4 1
9UD N3 F4 1
9UD N4 F4 1
9UD C20 F4 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 9UD
_pdbe_chem_comp_rdkit_properties.exactmw 510.255
_pdbe_chem_comp_rdkit_properties.amw 510.589
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 8
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 0
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 6
_pdbe_chem_comp_rdkit_properties.NumHBD 0
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 37
_pdbe_chem_comp_rdkit_properties.NumAtoms 69
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 10
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 1
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.519
_pdbe_chem_comp_rdkit_properties.NumRings 6
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 3
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 3
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 1
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 5
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 3
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 259.302
_pdbe_chem_comp_rdkit_properties.tpsa 68.420
_pdbe_chem_comp_rdkit_properties.CrippenClogP 3.202
_pdbe_chem_comp_rdkit_properties.CrippenMR 131.006
_pdbe_chem_comp_rdkit_properties.chi0v 17.756
_pdbe_chem_comp_rdkit_properties.chi1v 9.824
_pdbe_chem_comp_rdkit_properties.chi2v 4.922
_pdbe_chem_comp_rdkit_properties.chi3v 4.922
_pdbe_chem_comp_rdkit_properties.chi4v 3.410
_pdbe_chem_comp_rdkit_properties.chi0n 49.756
_pdbe_chem_comp_rdkit_properties.chi1n 25.824
_pdbe_chem_comp_rdkit_properties.chi2n 4.922
_pdbe_chem_comp_rdkit_properties.chi3n 4.922
_pdbe_chem_comp_rdkit_properties.chi4n 3.410
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.270
_pdbe_chem_comp_rdkit_properties.kappa1 7.223
_pdbe_chem_comp_rdkit_properties.kappa2 9.554
_pdbe_chem_comp_rdkit_properties.kappa3 4.305
_pdbe_chem_comp_rdkit_properties.Phi 1.865
#
loop_
_pdbe_chem_comp_external_mappings.comp_id
_pdbe_chem_comp_external_mappings.source
_pdbe_chem_comp_external_mappings.resource
_pdbe_chem_comp_external_mappings.resource_id
9UD UniChem SureChEMBL SCHEMBL17795251
9UD UniChem PubChem 121373418
9UD UniChem BindingDb 50269849
9UD UniChem MedChemExpress HY-108435
9UD UniChem 'Probes And Drugs' PD102627
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
9UD C4 3.673 -0.913 0.352 ETKDGv3 1
9UD C5 3.787 -0.580 -1.090 ETKDGv3 2
9UD C6 2.725 -0.150 -1.786 ETKDGv3 3
9UD N1 6.206 -2.843 2.213 ETKDGv3 4
9UD C7 1.394 -0.055 -1.131 ETKDGv3 5
9UD C8 1.302 -0.302 0.191 ETKDGv3 6
9UD N2 0.245 0.359 -1.914 ETKDGv3 7
9UD C9 2.484 -0.730 0.982 ETKDGv3 8
9UD C10 2.291 -0.970 2.462 ETKDGv3 9
9UD C11 0.388 0.640 -3.349 ETKDGv3 10
9UD C12 1.783 1.175 -3.681 ETKDGv3 11
9UD N3 -1.558 -0.892 -0.933 ETKDGv3 12
9UD C13 2.858 0.177 -3.249 ETKDGv3 13
9UD C14 -1.090 0.219 -1.406 ETKDGv3 14
9UD C15 -3.556 -1.530 0.475 ETKDGv3 15
9UD N4 -2.852 -0.643 -0.454 ETKDGv3 16
9UD N 6.983 -1.834 1.637 ETKDGv3 17
9UD C 8.426 -1.918 1.480 ETKDGv3 18
9UD O -4.424 -3.294 2.290 ETKDGv3 19
9UD C1 6.120 -1.002 0.877 ETKDGv3 20
9UD C16 -3.432 -2.995 0.035 ETKDGv3 21
9UD C17 -4.109 -3.934 1.062 ETKDGv3 22
9UD C18 -3.298 -2.588 2.775 ETKDGv3 23
9UD C19 -3.008 -1.352 1.904 ETKDGv3 24
9UD C2 4.877 -1.435 1.039 ETKDGv3 25
9UD C20 -3.089 0.753 -0.625 ETKDGv3 26
9UD C21 -2.056 1.300 -1.229 ETKDGv3 27
9UD C22 -1.935 2.757 -1.554 ETKDGv3 28
9UD C23 -3.921 2.981 0.067 ETKDGv3 29
9UD C24 -4.306 1.524 -0.233 ETKDGv3 30
9UD C25 -3.094 4.960 -1.297 ETKDGv3 31
9UD C26 -3.948 5.918 -0.522 ETKDGv3 32
9UD C3 4.972 -2.625 1.894 ETKDGv3 33
9UD F 1.414 -0.039 2.990 ETKDGv3 34
9UD F1 1.774 -2.237 2.659 ETKDGv3 35
9UD N5 -3.047 3.549 -0.984 ETKDGv3 36
9UD O1 -2.410 5.411 -2.257 ETKDGv3 37
9UD H1 4.744 -0.692 -1.586 ETKDGv3 38
9UD H2 0.358 -0.187 0.706 ETKDGv3 39
9UD H3 3.243 -0.871 3.023 ETKDGv3 40
9UD H4 0.202 -0.294 -3.923 ETKDGv3 41
9UD H5 -0.362 1.392 -3.671 ETKDGv3 42
9UD H6 1.861 1.347 -4.776 ETKDGv3 43
9UD H7 1.941 2.147 -3.165 ETKDGv3 44
9UD H8 2.763 -0.759 -3.840 ETKDGv3 45
9UD H9 3.857 0.621 -3.457 ETKDGv3 46
9UD H10 -4.638 -1.273 0.470 ETKDGv3 47
9UD H11 8.852 -0.901 1.350 ETKDGv3 48
9UD H12 8.875 -2.383 2.382 ETKDGv3 49
9UD H13 8.668 -2.535 0.589 ETKDGv3 50
9UD H14 6.438 -0.178 0.252 ETKDGv3 51
9UD H15 -3.894 -3.129 -0.967 ETKDGv3 52
9UD H16 -2.357 -3.270 -0.045 ETKDGv3 53
9UD H17 -3.468 -4.824 1.251 ETKDGv3 54
9UD H18 -5.058 -4.311 0.624 ETKDGv3 55
9UD H19 -2.403 -3.251 2.821 ETKDGv3 56
9UD H20 -3.504 -2.260 3.816 ETKDGv3 57
9UD H21 -3.476 -0.453 2.360 ETKDGv3 58
9UD H22 -1.908 -1.184 1.880 ETKDGv3 59
9UD H23 -1.941 2.861 -2.659 ETKDGv3 60
9UD H24 -0.968 3.139 -1.162 ETKDGv3 61
9UD H25 -3.390 3.030 1.043 ETKDGv3 62
9UD H26 -4.865 3.558 0.159 ETKDGv3 63
9UD H27 -4.777 1.079 0.668 ETKDGv3 64
9UD H28 -5.034 1.494 -1.071 ETKDGv3 65
9UD H29 -3.675 6.967 -0.768 ETKDGv3 66
9UD H30 -5.016 5.762 -0.779 ETKDGv3 67
9UD H31 -3.797 5.768 0.568 ETKDGv3 68
9UD H32 4.159 -3.272 2.190 ETKDGv3 69
#