data_9I9
#
_chem_comp.id 9I9
_chem_comp.name
(2S,3R)-2-azanyl-N-[(1R)-2-[3-[6,7-bis(chloranyl)-4-oxidanylidene-quinazolin-3-yl]propanoylamino]-1-[3-[4-(trifluoromethyl)phenyl]phenyl]ethyl]-3-oxidanyl-butanamide
_chem_comp.type non-polymer
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C30 H28 Cl2 F3 N5 O4"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2022-01-18
_chem_comp.pdbx_modified_date 2022-04-22
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 650.476
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 9I9
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 7WMF
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site PDBJ
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
9I9 F2 F1 F 0 1 N N N N N N -7.555 3.451 2.164 10.238 -3.887 0.400 F2 9I9 1
9I9 C24 C1 C 0 1 N N N N N N -6.901 2.317 1.854 10.181 -2.616 0.982 C24 9I9 2
9I9 F F2 F 0 1 N N N N N N -7.393 1.910 0.679 10.063 -2.745 2.371 F 9I9 3
9I9 F1 F3 F 0 1 N N N N N N -7.287 1.406 2.745 11.349 -1.910 0.677 F1 9I9 4
9I9 C23 C2 C 0 1 Y N N N N N -5.411 2.487 1.826 8.987 -1.870 0.444 C23 9I9 5
9I9 C22 C3 C 0 1 Y N N N N N -4.783 3.428 2.635 7.767 -1.967 1.087 C22 9I9 6
9I9 C21 C4 C 0 1 Y N N N N N -3.409 3.594 2.597 6.670 -1.285 0.599 C21 9I9 7
9I9 C25 C5 C 0 1 Y N N N N N -4.622 1.712 0.983 9.118 -1.086 -0.688 C25 9I9 8
9I9 C26 C6 C 0 1 Y N N N N N -3.248 1.882 0.940 8.029 -0.400 -1.185 C26 9I9 9
9I9 C20 C7 C 0 1 Y N N N N N -2.611 2.832 1.743 6.795 -0.499 -0.545 C20 9I9 10
9I9 C19 C8 C 0 1 Y N N N N N -1.140 3.045 1.664 5.620 0.236 -1.075 C19 9I9 11
9I9 C18 C9 C 0 1 Y N N N N N -0.589 4.304 1.925 4.387 0.138 -0.434 C18 9I9 12
9I9 C27 C10 C 0 1 Y N N N N N -0.280 2.004 1.307 5.747 1.032 -2.211 C27 9I9 13
9I9 C28 C11 C 0 1 Y N N N N N 1.084 2.219 1.208 4.651 1.714 -2.700 C28 9I9 14
9I9 C29 C12 C 0 1 Y N N N N N 1.611 3.470 1.475 3.428 1.607 -2.064 C29 9I9 15
9I9 C17 C13 C 0 1 Y N N N N N 0.782 4.524 1.831 3.297 0.824 -0.932 C17 9I9 16
9I9 C12 C14 C 0 1 N N R N N N 1.351 5.909 2.068 1.960 0.713 -0.244 C12 9I9 17
9I9 N3 N1 N 0 1 N N N N N N 2.547 5.886 2.908 1.366 2.045 -0.114 N3 9I9 18
9I9 C13 C15 C 0 1 N N N N N N 2.501 5.748 4.238 1.672 2.819 0.946 C13 9I9 19
9I9 O3 O1 O 0 1 N N N N N N 1.458 5.536 4.856 2.507 2.451 1.745 O3 9I9 20
9I9 C14 C16 C 0 1 N N S N N N 3.833 5.866 4.975 0.977 4.142 1.140 C14 9I9 21
9I9 N4 N2 N 0 1 N N N N N N 3.656 6.702 6.150 1.101 4.560 2.542 N4 9I9 22
9I9 C15 C17 C 0 1 N N R N N N 4.339 4.482 5.411 1.621 5.194 0.234 C15 9I9 23
9I9 C16 C18 C 0 1 N N N N N N 4.876 3.664 4.255 1.000 6.562 0.520 C16 9I9 24
9I9 O2 O2 O 0 1 N N N N N N 5.355 4.664 6.398 3.026 5.246 0.490 O2 9I9 25
9I9 C11 C19 C 0 1 N N N N N N 1.635 6.611 0.737 1.034 -0.181 -1.072 C11 9I9 26
9I9 N2 N3 N 0 1 N N N N N N 1.946 8.009 0.992 -0.301 -0.193 -0.467 N2 9I9 27
9I9 C C20 C 0 1 N N N N N N 1.049 8.986 0.882 -1.288 -0.918 -1.029 C 9I9 28
9I9 O O3 O 0 1 N N N N N N -0.080 8.803 0.435 -1.072 -1.560 -2.035 O 9I9 29
9I9 C1 C21 C 0 1 N N N N N N 1.518 10.351 1.330 -2.661 -0.930 -0.407 C1 9I9 30
9I9 C2 C22 C 0 1 N N N N N N 0.490 11.442 1.071 -3.588 -1.823 -1.234 C2 9I9 31
9I9 N N4 N 0 1 N N N N N N -0.650 11.367 2.000 -4.922 -1.835 -0.630 N 9I9 32
9I9 C10 C23 C 0 1 N N N N N N -0.461 11.789 3.311 -5.839 -0.915 -1.010 C10 9I9 33
9I9 O1 O4 O 0 1 N N N N N N 0.598 12.269 3.676 -5.578 -0.072 -1.848 O1 9I9 34
9I9 C9 C24 C 0 1 Y N N N N N -1.641 11.611 4.169 -7.161 -0.973 -0.372 C9 9I9 35
9I9 C4 C25 C 0 1 Y N N N N N -2.811 11.068 3.626 -7.389 -1.981 0.592 C4 9I9 36
9I9 N1 N5 N 0 1 N N N N N N -2.903 10.689 2.288 -6.387 -2.847 0.888 N1 9I9 37
9I9 C3 C26 C 0 1 N N N N N N -1.851 10.858 1.572 -5.230 -2.774 0.303 C3 9I9 38
9I9 C8 C27 C 0 1 Y N N N N N -1.589 11.971 5.512 -8.175 -0.072 -0.692 C8 9I9 39
9I9 C7 C28 C 0 1 Y N N N N N -2.704 11.791 6.308 -9.397 -0.171 -0.063 C7 9I9 40
9I9 CL1 CL1 CL 0 0 N N N N N N -2.606 12.233 7.979 -10.663 0.949 -0.458 CL1 9I9 41
9I9 C6 C29 C 0 1 Y N N N N N -3.871 11.262 5.776 -9.624 -1.162 0.887 C6 9I9 42
9I9 CL CL2 CL 0 0 N N N N N N -5.292 11.081 6.755 -11.173 -1.266 1.664 CL 9I9 43
9I9 C5 C30 C 0 1 Y N N N N N -3.932 10.894 4.443 -8.634 -2.062 1.217 C5 9I9 44
9I9 H1 H1 H 0 1 N N N N N N -5.375 4.037 3.302 7.671 -2.577 1.973 H1 9I9 45
9I9 H2 H2 H 0 1 N N N N N N -2.946 4.327 3.241 5.718 -1.362 1.102 H2 9I9 46
9I9 H3 H3 H 0 1 N N N N N N -5.087 0.968 0.353 10.075 -1.011 -1.184 H3 9I9 47
9I9 H4 H4 H 0 1 N N N N N N -2.658 1.269 0.274 8.132 0.212 -2.069 H4 9I9 48
9I9 H5 H5 H 0 1 N N N N N N -1.239 5.120 2.204 4.283 -0.474 0.449 H5 9I9 49
9I9 H6 H6 H 0 1 N N N N N N -0.683 1.022 1.106 6.702 1.116 -2.709 H6 9I9 50
9I9 H7 H7 H 0 1 N N N N N N 1.738 1.409 0.922 4.749 2.331 -3.581 H7 9I9 51
9I9 H8 H8 H 0 1 N N N N N N 2.677 3.628 1.406 2.572 2.143 -2.449 H8 9I9 52
9I9 H9 H9 H 0 1 N N N N N N 0.580 6.497 2.588 2.096 0.277 0.746 H9 9I9 53
9I9 H10 H10 H 0 1 N N N N N N 3.441 5.978 2.468 0.752 2.371 -0.791 H10 9I9 54
9I9 H11 H11 H 0 1 N N N N N N 4.575 6.319 4.301 -0.078 4.039 0.883 H11 9I9 55
9I9 H12 H12 H 0 1 N N N N N N 4.526 6.783 6.637 2.070 4.663 2.804 H12 9I9 56
9I9 H13 H13 H 0 1 N N N N N N 3.346 7.610 5.869 0.588 5.413 2.712 H13 9I9 57
9I9 H15 H15 H 0 1 N N N N N N 3.493 3.936 5.855 1.451 4.928 -0.809 H15 9I9 58
9I9 H16 H16 H 0 1 N N N N N N 5.222 2.688 4.626 1.169 6.828 1.564 H16 9I9 59
9I9 H17 H17 H 0 1 N N N N N N 4.079 3.512 3.512 1.459 7.312 -0.125 H17 9I9 60
9I9 H18 H18 H 0 1 N N N N N N 5.717 4.198 3.788 -0.072 6.523 0.325 H18 9I9 61
9I9 H19 H19 H 0 1 N N N N N N 5.009 5.178 7.118 3.252 5.477 1.401 H19 9I9 62
9I9 H20 H20 H 0 1 N N N N N N 0.749 6.543 0.089 0.969 0.207 -2.088 H20 9I9 63
9I9 H21 H21 H 0 1 N N N N N N 2.490 6.128 0.241 1.432 -1.195 -1.094 H21 9I9 64
9I9 H22 H22 H 0 1 N N N N N N 2.879 8.247 1.263 -0.473 0.321 0.338 H22 9I9 65
9I9 H23 H23 H 0 1 N N N N N N 1.727 10.314 2.409 -2.596 -1.317 0.610 H23 9I9 66
9I9 H24 H24 H 0 1 N N N N N N 2.441 10.601 0.786 -3.059 0.085 -0.384 H24 9I9 67
9I9 H25 H25 H 0 1 N N N N N N 0.977 12.422 1.187 -3.653 -1.436 -2.251 H25 9I9 68
9I9 H26 H26 H 0 1 N N N N N N 0.115 11.338 0.042 -3.190 -2.838 -1.257 H26 9I9 69
9I9 H27 H27 H 0 1 N N N N N N -1.917 10.572 0.533 -4.472 -3.493 0.576 H27 9I9 70
9I9 H28 H28 H 0 1 N N N N N N -0.684 12.388 5.929 -8.003 0.700 -1.428 H28 9I9 71
9I9 H29 H29 H 0 1 N N N N N N -4.840 10.475 4.036 -8.822 -2.828 1.956 H29 9I9 72
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
9I9 O C DOUB N N 1
9I9 F C24 SING N N 2
9I9 C11 N2 SING N N 3
9I9 C11 C12 SING N N 4
9I9 C N2 SING N N 5
9I9 C C1 SING N N 6
9I9 C26 C25 DOUB Y N 7
9I9 C26 C20 SING Y N 8
9I9 C25 C23 SING Y N 9
9I9 C2 C1 SING N N 10
9I9 C2 N SING N N 11
9I9 C28 C27 DOUB Y N 12
9I9 C28 C29 SING Y N 13
9I9 C27 C19 SING Y N 14
9I9 C29 C17 DOUB Y N 15
9I9 C3 N SING N N 16
9I9 C3 N1 DOUB N N 17
9I9 C19 C20 SING N N 18
9I9 C19 C18 DOUB Y N 19
9I9 C20 C21 DOUB Y N 20
9I9 C23 C24 SING N N 21
9I9 C23 C22 DOUB Y N 22
9I9 C17 C18 SING Y N 23
9I9 C17 C12 SING N N 24
9I9 C24 F2 SING N N 25
9I9 C24 F1 SING N N 26
9I9 N C10 SING N N 27
9I9 C12 N3 SING N N 28
9I9 N1 C4 SING N N 29
9I9 C21 C22 SING Y N 30
9I9 N3 C13 SING N N 31
9I9 C10 O1 DOUB N N 32
9I9 C10 C9 SING N N 33
9I9 C4 C9 DOUB Y N 34
9I9 C4 C5 SING Y N 35
9I9 C9 C8 SING Y N 36
9I9 C13 O3 DOUB N N 37
9I9 C13 C14 SING N N 38
9I9 C16 C15 SING N N 39
9I9 C5 C6 DOUB Y N 40
9I9 C14 C15 SING N N 41
9I9 C14 N4 SING N N 42
9I9 C15 O2 SING N N 43
9I9 C8 C7 DOUB Y N 44
9I9 C6 C7 SING Y N 45
9I9 C6 CL SING N N 46
9I9 C7 CL1 SING N N 47
9I9 C22 H1 SING N N 48
9I9 C21 H2 SING N N 49
9I9 C25 H3 SING N N 50
9I9 C26 H4 SING N N 51
9I9 C18 H5 SING N N 52
9I9 C27 H6 SING N N 53
9I9 C28 H7 SING N N 54
9I9 C29 H8 SING N N 55
9I9 C12 H9 SING N N 56
9I9 N3 H10 SING N N 57
9I9 C14 H11 SING N N 58
9I9 N4 H12 SING N N 59
9I9 N4 H13 SING N N 60
9I9 C15 H15 SING N N 61
9I9 C16 H16 SING N N 62
9I9 C16 H17 SING N N 63
9I9 C16 H18 SING N N 64
9I9 O2 H19 SING N N 65
9I9 C11 H20 SING N N 66
9I9 C11 H21 SING N N 67
9I9 N2 H22 SING N N 68
9I9 C1 H23 SING N N 69
9I9 C1 H24 SING N N 70
9I9 C2 H25 SING N N 71
9I9 C2 H26 SING N N 72
9I9 C3 H27 SING N N 73
9I9 C8 H28 SING N N 74
9I9 C5 H29 SING N N 75
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
9I9 InChI InChI 1.03 InChI=1S/C30H28Cl2F3N5O4/c1-16(41)27(36)28(43)39-25(19-4-2-3-18(11-19)17-5-7-20(8-6-17)30(33,34)35)14-37-26(42)9-10-40-15-38-24-13-23(32)22(31)12-21(24)29(40)44/h2-8,11-13,15-16,25,27,41H,9-10,14,36H2,1H3,(H,37,42)(H,39,43)/t16-,25+,27+/m1/s1
9I9 InChIKey InChI 1.03 MITSAJKYFZWXSM-YDZMPMGISA-N
9I9 SMILES_CANONICAL CACTVS 3.385 C[C@@H](O)[C@H](N)C(=O)N[C@@H](CNC(=O)CCN1C=Nc2cc(Cl)c(Cl)cc2C1=O)c3cccc(c3)c4ccc(cc4)C(F)(F)F
9I9 SMILES CACTVS 3.385 C[CH](O)[CH](N)C(=O)N[CH](CNC(=O)CCN1C=Nc2cc(Cl)c(Cl)cc2C1=O)c3cccc(c3)c4ccc(cc4)C(F)(F)F
9I9 SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 C[C@H]([C@@H](C(=O)N[C@@H](CNC(=O)CCN1C=Nc2cc(c(cc2C1=O)Cl)Cl)c3cccc(c3)c4ccc(cc4)C(F)(F)F)N)O
9I9 SMILES "OpenEye OEToolkits" 2.0.7 CC(C(C(=O)NC(CNC(=O)CCN1C=Nc2cc(c(cc2C1=O)Cl)Cl)c3cccc(c3)c4ccc(cc4)C(F)(F)F)N)O
#
_pdbx_chem_comp_identifier.comp_id 9I9
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.7
_pdbx_chem_comp_identifier.identifier
(2~{S},3~{R})-2-azanyl-~{N}-[(1~{R})-2-[3-[6,7-bis(chloranyl)-4-oxidanylidene-quinazolin-3-yl]propanoylamino]-1-[3-[4-(trifluoromethyl)phenyl]phenyl]ethyl]-3-oxidanyl-butanamide
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
9I9 'Create component' 2022-01-18 PDBJ
9I9 'Initial release' 2022-04-27 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
9I9 F2 F 21.487 -6.982 1
9I9 C24 C 19.987 -6.982 2
9I9 F F 19.987 -8.482 3
9I9 F1 F 18.487 -6.982 4
9I9 C23 C 19.987 -5.482 5
9I9 C22 C 18.687 -4.732 6
9I9 C21 C 18.687 -3.232 7
9I9 C25 C 21.286 -4.732 8
9I9 C26 C 21.286 -3.232 9
9I9 C20 C 19.987 -2.482 10
9I9 C19 C 19.987 -0.983 11
9I9 C18 C 18.687 -0.233 12
9I9 C27 C 21.286 -0.233 13
9I9 C28 C 21.286 1.268 14
9I9 C29 C 19.987 2.018 15
9I9 C17 C 18.687 1.268 16
9I9 C12 C 17.388 2.018 17
9I9 N3 N 17.388 3.518 18
9I9 C13 C 18.687 4.268 19
9I9 O3 O 19.987 3.518 20
9I9 C14 C 18.687 5.768 21
9I9 N4 N 17.388 6.518 22
9I9 C15 C 19.987 6.518 23
9I9 C16 C 19.987 8.018 24
9I9 O2 O 21.286 5.768 25
9I9 C11 C 16.089 1.268 26
9I9 N2 N 14.790 2.018 27
9I9 C C 13.491 1.268 28
9I9 O O 13.491 -0.233 29
9I9 C1 C 12.192 2.018 30
9I9 C2 C 10.893 1.268 31
9I9 N N 9.594 2.018 32
9I9 C10 C 8.295 1.268 33
9I9 O1 O 8.295 -0.233 34
9I9 C9 C 6.996 2.018 35
9I9 C4 C 6.996 3.518 36
9I9 N1 N 8.295 4.268 37
9I9 C3 C 9.594 3.518 38
9I9 C8 C 5.655 1.216 39
9I9 C7 C 4.296 1.986 40
9I9 CL1 Cl 3.000 1.231 41
9I9 C6 C 4.296 3.549 42
9I9 CL Cl 3.000 4.304 43
9I9 C5 C 5.655 4.320 44
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
9I9 O C DOUBLE NONE 1
9I9 F C24 SINGLE NONE 2
9I9 C11 N2 SINGLE NONE 3
9I9 C12 C11 SINGLE BEGINDASH 4
9I9 C N2 SINGLE NONE 5
9I9 C C1 SINGLE NONE 6
9I9 C26 C25 SINGLE NONE 7
9I9 C26 C20 DOUBLE NONE 8
9I9 C25 C23 DOUBLE NONE 9
9I9 C2 C1 SINGLE NONE 10
9I9 C2 N SINGLE NONE 11
9I9 C28 C27 DOUBLE NONE 12
9I9 C28 C29 SINGLE NONE 13
9I9 C27 C19 SINGLE NONE 14
9I9 C29 C17 DOUBLE NONE 15
9I9 C3 N SINGLE NONE 16
9I9 C3 N1 DOUBLE NONE 17
9I9 C19 C20 SINGLE NONE 18
9I9 C19 C18 DOUBLE NONE 19
9I9 C20 C21 SINGLE NONE 20
9I9 C23 C24 SINGLE NONE 21
9I9 C23 C22 SINGLE NONE 22
9I9 C17 C18 SINGLE NONE 23
9I9 C17 C12 SINGLE NONE 24
9I9 C24 F2 SINGLE NONE 25
9I9 C24 F1 SINGLE NONE 26
9I9 N C10 SINGLE NONE 27
9I9 C12 N3 SINGLE NONE 28
9I9 N1 C4 SINGLE NONE 29
9I9 C21 C22 DOUBLE NONE 30
9I9 N3 C13 SINGLE NONE 31
9I9 C10 O1 DOUBLE NONE 32
9I9 C10 C9 SINGLE NONE 33
9I9 C4 C9 DOUBLE NONE 34
9I9 C4 C5 SINGLE NONE 35
9I9 C9 C8 SINGLE NONE 36
9I9 C13 O3 DOUBLE NONE 37
9I9 C13 C14 SINGLE NONE 38
9I9 C15 C16 SINGLE BEGINWEDGE 39
9I9 C5 C6 DOUBLE NONE 40
9I9 C14 C15 SINGLE NONE 41
9I9 C14 N4 SINGLE BEGINWEDGE 42
9I9 C15 O2 SINGLE NONE 43
9I9 C8 C7 DOUBLE NONE 44
9I9 C6 C7 SINGLE NONE 45
9I9 C6 CL SINGLE NONE 46
9I9 C7 CL1 SINGLE NONE 47
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
9I9 MurckoScaffold S1 scaffold O=C(CCn1cnc2ccccc2c1=O)NCCc1cccc(-c2ccccc2)c1 InChI=1S/C25H23N3O2/c29-24(14-16-28-18-27-23-12-5-4-11-22(23)25(28)30)26-15-13-19-7-6-10-21(17-19)20-8-2-1-3-9-20/h1-12,17-18H,13-16H2,(H,26,29) OHXHSTRLPAIYJT-UHFFFAOYSA-N
9I9 amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N
9I9 peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N
9I9 phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N
9I9 pyrimidine F4 fragment c1cncnc1 InChI=1S/C4H4N2/c1-2-5-4-6-3-1/h1-4H CZPWVGJYEJSRLH-UHFFFAOYSA-N
9I9 quinazoline F5 fragment c1ccc2ncncc2c1 InChI=1S/C8H6N2/c1-2-4-8-7(3-1)5-9-6-10-8/h1-6H JWVCLYRUEFBMGU-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
9I9 C23 S1 1
9I9 C22 S1 1
9I9 C21 S1 1
9I9 C25 S1 1
9I9 C26 S1 1
9I9 C20 S1 1
9I9 C19 S1 1
9I9 C18 S1 1
9I9 C27 S1 1
9I9 C28 S1 1
9I9 C29 S1 1
9I9 C17 S1 1
9I9 C12 S1 1
9I9 C11 S1 1
9I9 N2 S1 1
9I9 C S1 1
9I9 O S1 1
9I9 C1 S1 1
9I9 C2 S1 1
9I9 N S1 1
9I9 C10 S1 1
9I9 O1 S1 1
9I9 C9 S1 1
9I9 C4 S1 1
9I9 N1 S1 1
9I9 C3 S1 1
9I9 C8 S1 1
9I9 C7 S1 1
9I9 C6 S1 1
9I9 C5 S1 1
9I9 N3 F1 1
9I9 C13 F1 1
9I9 O3 F1 1
9I9 C14 F1 1
9I9 N2 F1 2
9I9 C F1 2
9I9 O F1 2
9I9 C1 F1 2
9I9 O3 F2 1
9I9 C13 F2 1
9I9 C14 F2 1
9I9 N4 F2 1
9I9 C23 F3 1
9I9 C25 F3 1
9I9 C26 F3 1
9I9 C20 F3 1
9I9 C21 F3 1
9I9 C22 F3 1
9I9 C19 F3 2
9I9 C27 F3 2
9I9 C28 F3 2
9I9 C29 F3 2
9I9 C17 F3 2
9I9 C18 F3 2
9I9 C9 F3 3
9I9 C4 F3 3
9I9 C5 F3 3
9I9 C6 F3 3
9I9 C7 F3 3
9I9 C8 F3 3
9I9 C9 F4 1
9I9 C10 F4 1
9I9 N F4 1
9I9 C3 F4 1
9I9 N1 F4 1
9I9 C4 F4 1
9I9 C7 F5 1
9I9 C6 F5 1
9I9 C5 F5 1
9I9 C4 F5 1
9I9 C9 F5 1
9I9 C8 F5 1
9I9 C10 F5 1
9I9 N F5 1
9I9 C3 F5 1
9I9 N1 F5 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 9I9
_pdbe_chem_comp_rdkit_properties.exactmw 649.147
_pdbe_chem_comp_rdkit_properties.amw 650.485
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 9
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 5
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 13
_pdbe_chem_comp_rdkit_properties.NumHBD 4
_pdbe_chem_comp_rdkit_properties.NumHBA 7
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 44
_pdbe_chem_comp_rdkit_properties.NumAtoms 72
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 14
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 2
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.267
_pdbe_chem_comp_rdkit_properties.NumRings 4
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 4
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 1
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 3
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 299.006
_pdbe_chem_comp_rdkit_properties.tpsa 139.340
_pdbe_chem_comp_rdkit_properties.CrippenClogP 4.443
_pdbe_chem_comp_rdkit_properties.CrippenMR 157.118
_pdbe_chem_comp_rdkit_properties.chi0v 22.271
_pdbe_chem_comp_rdkit_properties.chi1v 11.753
_pdbe_chem_comp_rdkit_properties.chi2v 5.424
_pdbe_chem_comp_rdkit_properties.chi3v 5.424
_pdbe_chem_comp_rdkit_properties.chi4v 3.085
_pdbe_chem_comp_rdkit_properties.chi0n 48.759
_pdbe_chem_comp_rdkit_properties.chi1n 24.695
_pdbe_chem_comp_rdkit_properties.chi2n 4.760
_pdbe_chem_comp_rdkit_properties.chi3n 4.760
_pdbe_chem_comp_rdkit_properties.chi4n 2.807
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -3.970
_pdbe_chem_comp_rdkit_properties.kappa1 12.086
_pdbe_chem_comp_rdkit_properties.kappa2 13.768
_pdbe_chem_comp_rdkit_properties.kappa3 7.942
_pdbe_chem_comp_rdkit_properties.Phi 3.782
#
_pdbe_chem_comp_external_mappings.comp_id 9I9
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PubChem
_pdbe_chem_comp_external_mappings.resource_id 163196955
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
9I9 F2 -6.492 1.443 3.525 ETKDGv3 1
9I9 C24 -5.377 2.263 3.563 ETKDGv3 2
9I9 F -5.655 3.435 2.884 ETKDGv3 3
9I9 F1 -5.105 2.564 4.886 ETKDGv3 4
9I9 C23 -4.199 1.581 2.916 ETKDGv3 5
9I9 C22 -2.829 1.773 3.455 ETKDGv3 6
9I9 C21 -1.778 1.205 2.853 ETKDGv3 7
9I9 C25 -4.361 0.862 1.790 ETKDGv3 8
9I9 C26 -3.201 0.230 1.129 ETKDGv3 9
9I9 C20 -1.960 0.387 1.629 ETKDGv3 10
9I9 C19 -0.784 -0.244 0.983 ETKDGv3 11
9I9 C18 -0.642 -0.249 -0.356 ETKDGv3 12
9I9 C27 0.265 -0.877 1.821 ETKDGv3 13
9I9 C28 1.332 -1.446 1.252 ETKDGv3 14
9I9 C29 1.488 -1.436 -0.215 ETKDGv3 15
9I9 C17 0.550 -0.870 -0.993 ETKDGv3 16
9I9 C12 0.650 -0.948 -2.503 ETKDGv3 17
9I9 N3 -0.485 -1.718 -3.020 ETKDGv3 18
9I9 C13 -0.666 -3.105 -2.703 ETKDGv3 19
9I9 O3 0.298 -3.780 -2.247 ETKDGv3 20
9I9 C14 -2.033 -3.726 -2.827 ETKDGv3 21
9I9 N4 -1.919 -5.185 -2.948 ETKDGv3 22
9I9 C15 -2.926 -3.292 -1.633 ETKDGv3 23
9I9 C16 -4.371 -3.764 -1.797 ETKDGv3 24
9I9 O2 -2.418 -3.783 -0.417 ETKDGv3 25
9I9 C11 0.669 0.455 -3.138 ETKDGv3 26
9I9 N2 1.772 1.266 -2.624 ETKDGv3 27
9I9 C 3.101 1.176 -3.155 ETKDGv3 28
9I9 O 3.474 0.139 -3.767 ETKDGv3 29
9I9 C1 4.052 2.326 -2.998 ETKDGv3 30
9I9 C2 5.064 2.095 -1.870 ETKDGv3 31
9I9 N 4.406 1.819 -0.586 ETKDGv3 32
9I9 C10 3.664 2.832 0.119 ETKDGv3 33
9I9 O1 3.537 3.991 -0.362 ETKDGv3 34
9I9 C9 3.073 2.500 1.427 ETKDGv3 35
9I9 C4 3.305 1.279 1.947 ETKDGv3 36
9I9 N1 4.070 0.304 1.221 ETKDGv3 37
9I9 C3 4.573 0.536 0.045 ETKDGv3 38
9I9 C8 2.237 3.472 2.173 ETKDGv3 39
9I9 C7 1.720 3.142 3.365 ETKDGv3 40
9I9 CL1 0.707 4.298 4.216 ETKDGv3 41
9I9 C6 1.999 1.805 3.947 ETKDGv3 42
9I9 CL 1.340 1.350 5.512 ETKDGv3 43
9I9 C5 2.753 0.928 3.272 ETKDGv3 44
9I9 H1 -2.667 2.381 4.337 ETKDGv3 45
9I9 H2 -0.787 1.367 3.255 ETKDGv3 46
9I9 H3 -5.343 0.735 1.351 ETKDGv3 47
9I9 H4 -3.374 -0.374 0.248 ETKDGv3 48
9I9 H5 -1.395 0.208 -0.985 ETKDGv3 49
9I9 H6 0.163 -0.900 2.898 ETKDGv3 50
9I9 H7 2.088 -1.916 1.867 ETKDGv3 51
9I9 H8 2.357 -1.915 -0.649 ETKDGv3 52
9I9 H9 1.588 -1.464 -2.807 ETKDGv3 53
9I9 H10 -1.258 -1.222 -3.520 ETKDGv3 54
9I9 H11 -2.486 -3.336 -3.766 ETKDGv3 55
9I9 H12 -1.723 -5.611 -2.014 ETKDGv3 56
9I9 H13 -2.826 -5.573 -3.294 ETKDGv3 57
9I9 H15 -2.958 -2.176 -1.604 ETKDGv3 58
9I9 H16 -4.438 -4.870 -1.722 ETKDGv3 59
9I9 H17 -4.999 -3.324 -0.993 ETKDGv3 60
9I9 H18 -4.778 -3.436 -2.777 ETKDGv3 61
9I9 H19 -1.714 -3.150 -0.118 ETKDGv3 62
9I9 H20 -0.290 0.978 -2.933 ETKDGv3 63
9I9 H21 0.757 0.366 -4.243 ETKDGv3 64
9I9 H22 1.536 2.067 -1.996 ETKDGv3 65
9I9 H23 3.484 3.262 -2.818 ETKDGv3 66
9I9 H24 4.605 2.467 -3.951 ETKDGv3 67
9I9 H25 5.704 2.998 -1.766 ETKDGv3 68
9I9 H26 5.736 1.256 -2.155 ETKDGv3 69
9I9 H27 5.133 -0.247 -0.449 ETKDGv3 70
9I9 H28 2.034 4.447 1.749 ETKDGv3 71
9I9 H29 2.954 -0.051 3.689 ETKDGv3 72
#