data_8KK # _chem_comp.id 8KK _chem_comp.name "~{N}-[(2~{S})-1-(3-azanylpropylamino)-4-methyl-1-oxidanylidene-pentan-2-yl]-(phenylmethoxycarbonylaminomethyl)phosphonamidic acid" _chem_comp.type NON-POLYMER _chem_comp.pdbx_type HETAIN _chem_comp.formula "C18 H31 N4 O5 P" _chem_comp.mon_nstd_parent_comp_id ? _chem_comp.pdbx_synonyms ? _chem_comp.pdbx_formal_charge 0 _chem_comp.pdbx_initial_date 2017-02-09 _chem_comp.pdbx_modified_date 2017-06-16 _chem_comp.pdbx_ambiguous_flag N _chem_comp.pdbx_release_status REL _chem_comp.pdbx_replaced_by ? _chem_comp.pdbx_replaces ? _chem_comp.formula_weight 414.436 _chem_comp.one_letter_code ? _chem_comp.three_letter_code 8KK _chem_comp.pdbx_model_coordinates_details ? _chem_comp.pdbx_model_coordinates_missing_flag N _chem_comp.pdbx_ideal_coordinates_details Corina _chem_comp.pdbx_ideal_coordinates_missing_flag N _chem_comp.pdbx_model_coordinates_db_code 5N2T _chem_comp.pdbx_subcomponent_list ? _chem_comp.pdbx_processing_site EBI # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.alt_atom_id _chem_comp_atom.type_symbol _chem_comp_atom.charge _chem_comp_atom.pdbx_align _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_leaving_atom_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_backbone_atom_flag _chem_comp_atom.pdbx_n_terminal_atom_flag _chem_comp_atom.pdbx_c_terminal_atom_flag _chem_comp_atom.model_Cartn_x _chem_comp_atom.model_Cartn_y _chem_comp_atom.model_Cartn_z _chem_comp_atom.pdbx_model_Cartn_x_ideal _chem_comp_atom.pdbx_model_Cartn_y_ideal _chem_comp_atom.pdbx_model_Cartn_z_ideal _chem_comp_atom.pdbx_component_atom_id _chem_comp_atom.pdbx_component_comp_id _chem_comp_atom.pdbx_ordinal 8KK C10 C1 C 0 1 N N N N N N 12.232 40.180 -6.935 0.982 -1.914 1.094 C10 8KK 1 8KK C11 C2 C 0 1 N N N N N N 12.986 40.495 -9.328 2.995 -0.556 0.897 C11 8KK 2 8KK C12 C3 C 0 1 N N N N N N 13.950 40.368 -11.502 4.905 0.874 0.834 C12 8KK 3 8KK C13 C4 C 0 1 Y N N N N N 15.466 40.562 -11.634 6.200 1.027 0.079 C13 8KK 4 8KK C14 C5 C 0 1 Y N N N N N 16.125 41.345 -10.705 6.245 1.796 -1.069 C14 8KK 5 8KK C15 C6 C 0 1 Y N N N N N 17.479 41.544 -10.774 7.433 1.936 -1.761 C15 8KK 6 8KK C16 C7 C 0 1 Y N N N N N 18.232 40.982 -11.775 8.577 1.307 -1.305 C16 8KK 7 8KK O01 O1 O 0 1 N N N N N N 12.537 37.576 -6.139 -0.328 -1.754 -1.382 O01 8KK 8 8KK P01 P1 P 0 1 N N N N N N 11.557 38.734 -6.043 -0.356 -1.158 0.114 P01 8KK 9 8KK N01 N1 N 0 1 N N N N N N 11.312 39.288 -4.480 -1.840 -1.505 0.828 N01 8KK 10 8KK C01 C8 C 0 1 N N S N N N 10.174 38.786 -3.702 -2.950 -1.004 0.006 C01 8KK 11 8KK C02 C9 C 0 1 N N N N N N 10.565 38.856 -2.207 -4.125 -1.982 0.085 C02 8KK 12 8KK C03 C10 C 0 1 N N N N N N 9.495 38.332 -1.263 -3.724 -3.313 -0.553 C03 8KK 13 8KK C04 C11 C 0 1 N N N N N N 9.794 38.694 0.189 -4.840 -4.337 -0.340 C04 8KK 14 8KK C05 C12 C 0 1 N N N N N N 9.349 36.822 -1.402 -3.495 -3.112 -2.052 C05 8KK 15 8KK C06 C13 C 0 1 N N N N N N 8.922 39.626 -3.920 -3.385 0.345 0.518 C06 8KK 16 8KK N02 N2 N 0 1 N N N N N N 9.150 40.985 -4.114 -4.395 1.001 -0.086 N02 8KK 17 8KK C07 C14 C 0 1 N N N N N N 8.050 41.923 -4.246 -4.818 2.313 0.410 C07 8KK 18 8KK C08 C15 C 0 1 N N N N N N 8.349 43.194 -3.453 -5.974 2.835 -0.445 C08 8KK 19 8KK C09 C16 C 0 1 N N N N N N 8.767 43.058 -2.011 -6.415 4.205 0.074 C09 8KK 20 8KK N03 N3 N 0 1 N N N N N N 8.972 44.403 -1.445 -7.524 4.706 -0.748 N03 8KK 21 8KK O02 O2 O 0 1 N N N N N N 7.806 39.187 -3.869 -2.825 0.841 1.472 O02 8KK 22 8KK O03 O3 O 0 1 N N N N N N 10.195 38.357 -6.609 -0.164 0.309 0.064 O03 8KK 23 8KK N04 N4 N 0 1 N N N N N N 12.895 39.758 -8.151 2.273 -1.612 0.472 N04 8KK 24 8KK O04 O4 O 0 1 N N N N N N 13.627 39.745 -10.293 4.182 -0.278 0.326 O04 8KK 25 8KK C17 C17 C 0 1 Y N N N N N 17.615 40.161 -12.693 8.532 0.538 -0.157 C17 8KK 26 8KK C18 C18 C 0 1 Y N N N N N 16.247 39.951 -12.634 7.345 0.403 0.539 C18 8KK 27 8KK O05 O5 O 0 1 N N N N N N 12.561 41.578 -9.423 2.575 0.146 1.796 O05 8KK 28 8KK H1 H1 H 0 1 N N N N N N 12.955 40.699 -6.289 0.962 -1.510 2.107 H1 8KK 29 8KK H2 H2 H 0 1 N N N N N N 11.410 40.865 -7.189 0.840 -2.994 1.131 H2 8KK 30 8KK H3 H3 H 0 1 N N N N N N 13.457 41.350 -11.543 5.116 0.732 1.894 H3 8KK 31 8KK H4 H4 H 0 1 N N N N N N 13.594 39.744 -12.335 4.299 1.770 0.701 H4 8KK 32 8KK H5 H5 H 0 1 N N N N N N 15.562 41.809 -9.909 5.352 2.286 -1.425 H5 8KK 33 8KK H6 H6 H 0 1 N N N N N N 17.963 42.155 -10.026 7.468 2.536 -2.658 H6 8KK 34 8KK H7 H7 H 0 1 N N N N N N 19.292 41.180 -11.842 9.505 1.416 -1.846 H7 8KK 35 8KK H8 H8 H 0 1 N N N N N N 12.107 36.829 -6.539 -0.371 -2.719 -1.421 H8 8KK 36 8KK H9 H9 H 0 1 N N N N N N 12.138 39.068 -3.961 -1.936 -2.494 1.001 H9 8KK 37 8KK H10 H10 H 0 1 N N N N N N 9.963 37.740 -3.970 -2.623 -0.912 -1.029 H10 8KK 38 8KK H11 H11 H 0 1 N N N N N N 11.478 38.260 -2.060 -4.392 -2.145 1.129 H11 8KK 39 8KK H12 H12 H 0 1 N N N N N N 10.768 39.907 -1.951 -4.980 -1.566 -0.448 H12 8KK 40 8KK H13 H13 H 0 1 N N N N N N 8.537 38.795 -1.540 -2.805 -3.675 -0.091 H13 8KK 41 8KK H14 H14 H 0 1 N N N N N N 8.999 38.298 0.837 -5.759 -3.975 -0.802 H14 8KK 42 8KK H15 H15 H 0 1 N N N N N N 10.759 38.257 0.484 -4.555 -5.286 -0.795 H15 8KK 43 8KK H16 H16 H 0 1 N N N N N N 9.840 39.788 0.292 -5.003 -4.481 0.728 H16 8KK 44 8KK H17 H17 H 0 1 N N N N N N 8.571 36.463 -0.712 -4.414 -2.749 -2.514 H17 8KK 45 8KK H18 H18 H 0 1 N N N N N N 9.064 36.575 -2.435 -2.700 -2.382 -2.204 H18 8KK 46 8KK H19 H19 H 0 1 N N N N N N 10.306 36.337 -1.160 -3.210 -4.060 -2.507 H19 8KK 47 8KK H20 H20 H 0 1 N N N N N N 10.090 41.322 -4.163 -4.843 0.605 -0.850 H20 8KK 48 8KK H21 H21 H 0 1 N N N N N N 7.915 42.179 -5.307 -5.145 2.221 1.446 H21 8KK 49 8KK H22 H22 H 0 1 N N N N N N 7.129 41.461 -3.860 -3.981 3.010 0.354 H22 8KK 50 8KK H23 H23 H 0 1 N N N N N N 9.159 43.722 -3.978 -5.646 2.927 -1.481 H23 8KK 51 8KK H24 H24 H 0 1 N N N N N N 7.438 43.810 -3.471 -6.810 2.138 -0.389 H24 8KK 52 8KK H25 H25 H 0 1 N N N N N N 7.981 42.536 -1.446 -6.742 4.113 1.109 H25 8KK 53 8KK H26 H26 H 0 1 N N N N N N 9.704 42.485 -1.951 -5.578 4.901 0.017 H26 8KK 54 8KK H27 H27 H 0 1 N N N N N N 9.250 44.324 -0.488 -8.288 4.047 -0.765 H27 8KK 55 8KK H28 H28 H 0 1 N N N N N N 9.686 44.876 -1.961 -7.834 5.610 -0.425 H28 8KK 56 8KK H30 H30 H 0 1 N N N N N N 13.326 38.856 -8.145 2.609 -2.172 -0.245 H30 8KK 57 8KK H31 H31 H 0 1 N N N N N N 18.200 39.679 -13.462 9.427 0.051 0.202 H31 8KK 58 8KK H32 H32 H 0 1 N N N N N N 15.774 39.311 -13.364 7.311 -0.197 1.436 H32 8KK 59 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 8KK C17 C18 DOUB Y N 1 8KK C17 C16 SING Y N 2 8KK C18 C13 SING Y N 3 8KK C16 C15 DOUB Y N 4 8KK C13 C12 SING N N 5 8KK C13 C14 DOUB Y N 6 8KK C12 O04 SING N N 7 8KK C15 C14 SING Y N 8 8KK O04 C11 SING N N 9 8KK O05 C11 DOUB N N 10 8KK C11 N04 SING N N 11 8KK N04 C10 SING N N 12 8KK C10 P01 SING N N 13 8KK O03 P01 DOUB N N 14 8KK O01 P01 SING N N 15 8KK P01 N01 SING N N 16 8KK N01 C01 SING N N 17 8KK C07 N02 SING N N 18 8KK C07 C08 SING N N 19 8KK N02 C06 SING N N 20 8KK C06 O02 DOUB N N 21 8KK C06 C01 SING N N 22 8KK C01 C02 SING N N 23 8KK C08 C09 SING N N 24 8KK C02 C03 SING N N 25 8KK C09 N03 SING N N 26 8KK C05 C03 SING N N 27 8KK C03 C04 SING N N 28 8KK C10 H1 SING N N 29 8KK C10 H2 SING N N 30 8KK C12 H3 SING N N 31 8KK C12 H4 SING N N 32 8KK C14 H5 SING N N 33 8KK C15 H6 SING N N 34 8KK C16 H7 SING N N 35 8KK O01 H8 SING N N 36 8KK N01 H9 SING N N 37 8KK C01 H10 SING N N 38 8KK C02 H11 SING N N 39 8KK C02 H12 SING N N 40 8KK C03 H13 SING N N 41 8KK C04 H14 SING N N 42 8KK C04 H15 SING N N 43 8KK C04 H16 SING N N 44 8KK C05 H17 SING N N 45 8KK C05 H18 SING N N 46 8KK C05 H19 SING N N 47 8KK N02 H20 SING N N 48 8KK C07 H21 SING N N 49 8KK C07 H22 SING N N 50 8KK C08 H23 SING N N 51 8KK C08 H24 SING N N 52 8KK C09 H25 SING N N 53 8KK C09 H26 SING N N 54 8KK N03 H27 SING N N 55 8KK N03 H28 SING N N 56 8KK N04 H30 SING N N 57 8KK C17 H31 SING N N 58 8KK C18 H32 SING N N 59 # loop_ _pdbx_chem_comp_descriptor.comp_id _pdbx_chem_comp_descriptor.type _pdbx_chem_comp_descriptor.program _pdbx_chem_comp_descriptor.program_version _pdbx_chem_comp_descriptor.descriptor 8KK InChI InChI 1.03 InChI=1S/C18H31N4O5P/c1-14(2)11-16(17(23)20-10-6-9-19)22-28(25,26)13-21-18(24)27-12-15-7-4-3-5-8-15/h3-5,7-8,14,16H,6,9-13,19H2,1-2H3,(H,20,23)(H,21,24)(H2,22,25,26)/t16-/m0/s1 8KK InChIKey InChI 1.03 YXKYWNUEXNHFHI-INIZCTEOSA-N 8KK SMILES_CANONICAL CACTVS 3.385 CC(C)C[C@H](N[P](O)(=O)CNC(=O)OCc1ccccc1)C(=O)NCCCN 8KK SMILES CACTVS 3.385 CC(C)C[CH](N[P](O)(=O)CNC(=O)OCc1ccccc1)C(=O)NCCCN 8KK SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 CC(C)C[C@@H](C(=O)NCCCN)NP(=O)(CNC(=O)OCc1ccccc1)O 8KK SMILES "OpenEye OEToolkits" 2.0.6 CC(C)CC(C(=O)NCCCN)NP(=O)(CNC(=O)OCc1ccccc1)O # _pdbx_chem_comp_identifier.comp_id 8KK _pdbx_chem_comp_identifier.type "SYSTEMATIC NAME" _pdbx_chem_comp_identifier.program "OpenEye OEToolkits" _pdbx_chem_comp_identifier.program_version 2.0.6 _pdbx_chem_comp_identifier.identifier "~{N}-[(2~{S})-1-(3-azanylpropylamino)-4-methyl-1-oxidanylidene-pentan-2-yl]-(phenylmethoxycarbonylaminomethyl)phosphonamidic acid" # loop_ _pdbx_chem_comp_audit.comp_id _pdbx_chem_comp_audit.action_type _pdbx_chem_comp_audit.date _pdbx_chem_comp_audit.processing_site 8KK 'Create component' 2017-02-09 EBI 8KK 'Initial release' 2017-06-21 RCSB # loop_ _software.name _software.version _software.description rdkit 2025.03.3 'Core functionality.' pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.' # loop_ _pdbe_chem_comp_atom_depiction.comp_id _pdbe_chem_comp_atom_depiction.atom_id _pdbe_chem_comp_atom_depiction.element _pdbe_chem_comp_atom_depiction.model_Cartn_x _pdbe_chem_comp_atom_depiction.model_Cartn_y _pdbe_chem_comp_atom_depiction.pdbx_ordinal 8KK C10 C 6.897 1.500 1 8KK C11 C 5.598 -0.750 2 8KK C12 C 4.299 -3.000 3 8KK C13 C 4.299 -4.500 4 8KK C14 C 3.000 -5.250 5 8KK C15 C 3.000 -6.750 6 8KK C16 C 4.299 -7.500 7 8KK O01 O 8.946 0.951 8 8KK P01 P 8.196 2.250 9 8KK N01 N 9.495 3.000 10 8KK C01 C 9.495 4.500 11 8KK C02 C 8.196 5.250 12 8KK C03 C 8.196 6.750 13 8KK C04 C 9.495 7.500 14 8KK C05 C 6.897 7.500 15 8KK C06 C 10.794 5.250 16 8KK N02 N 12.093 4.500 17 8KK C07 C 13.392 5.250 18 8KK C08 C 14.691 4.500 19 8KK C09 C 15.990 5.250 20 8KK N03 N 17.290 4.500 21 8KK O02 O 10.794 6.750 22 8KK O03 O 7.446 3.549 23 8KK N04 N 6.897 0.000 24 8KK O04 O 5.598 -2.250 25 8KK C17 C 5.598 -6.750 26 8KK C18 C 5.598 -5.250 27 8KK O05 O 4.299 0.000 28 # loop_ _pdbe_chem_comp_bond_depiction.comp_id _pdbe_chem_comp_bond_depiction.atom_id_1 _pdbe_chem_comp_bond_depiction.atom_id_2 _pdbe_chem_comp_bond_depiction.value_order _pdbe_chem_comp_bond_depiction.bond_dir _pdbe_chem_comp_bond_depiction.pdbx_ordinal 8KK C17 C18 SINGLE NONE 1 8KK C17 C16 DOUBLE NONE 2 8KK C18 C13 DOUBLE NONE 3 8KK C16 C15 SINGLE NONE 4 8KK C13 C12 SINGLE NONE 5 8KK C13 C14 SINGLE NONE 6 8KK C12 O04 SINGLE NONE 7 8KK C15 C14 DOUBLE NONE 8 8KK O04 C11 SINGLE NONE 9 8KK O05 C11 DOUBLE NONE 10 8KK C11 N04 SINGLE NONE 11 8KK N04 C10 SINGLE NONE 12 8KK C10 P01 SINGLE NONE 13 8KK O03 P01 DOUBLE NONE 14 8KK P01 O01 SINGLE BEGINWEDGE 15 8KK P01 N01 SINGLE NONE 16 8KK N01 C01 SINGLE NONE 17 8KK C07 N02 SINGLE NONE 18 8KK C07 C08 SINGLE NONE 19 8KK N02 C06 SINGLE NONE 20 8KK C06 O02 DOUBLE NONE 21 8KK C06 C01 SINGLE NONE 22 8KK C01 C02 SINGLE BEGINWEDGE 23 8KK C08 C09 SINGLE NONE 24 8KK C02 C03 SINGLE NONE 25 8KK C09 N03 SINGLE NONE 26 8KK C05 C03 SINGLE NONE 27 8KK C03 C04 SINGLE NONE 28 # loop_ _pdbe_chem_comp_substructure.comp_id _pdbe_chem_comp_substructure.substructure_name _pdbe_chem_comp_substructure.id _pdbe_chem_comp_substructure.substructure_type _pdbe_chem_comp_substructure.substructure_smiles _pdbe_chem_comp_substructure.substructure_inchis _pdbe_chem_comp_substructure.substructure_inchikeys 8KK MurckoScaffold S1 scaffold c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N 8KK amide F1 fragment CC(N)=O InChI=1S/C2H5NO/c1-2(3)4/h1H3,(H2,3,4) DLFVBJFMPXGRIB-UHFFFAOYSA-N 8KK peptide F2 fragment NCC=O InChI=1S/C2H5NO/c3-1-2-4/h2H,1,3H2 LYIIBVSRGJSHAV-UHFFFAOYSA-N 8KK phenyl F3 fragment c1ccccc1 InChI=1S/C6H6/c1-2-4-6-5-3-1/h1-6H UHOVQNZJYSORNB-UHFFFAOYSA-N # loop_ _pdbe_chem_comp_substructure_mapping.comp_id _pdbe_chem_comp_substructure_mapping.atom_id _pdbe_chem_comp_substructure_mapping.substructure_id _pdbe_chem_comp_substructure_mapping.substructure_ordinal 8KK C13 S1 1 8KK C14 S1 1 8KK C15 S1 1 8KK C16 S1 1 8KK C17 S1 1 8KK C18 S1 1 8KK N02 F1 1 8KK C06 F1 1 8KK O02 F1 1 8KK C01 F1 1 8KK O02 F2 1 8KK C06 F2 1 8KK C01 F2 1 8KK N01 F2 1 8KK C13 F3 1 8KK C18 F3 1 8KK C17 F3 1 8KK C16 F3 1 8KK C15 F3 1 8KK C14 F3 1 # _pdbe_chem_comp_rdkit_properties.comp_id 8KK _pdbe_chem_comp_rdkit_properties.exactmw 414.203 _pdbe_chem_comp_rdkit_properties.amw 414.443 _pdbe_chem_comp_rdkit_properties.lipinskiHBA 9 _pdbe_chem_comp_rdkit_properties.lipinskiHBD 6 _pdbe_chem_comp_rdkit_properties.NumRotatableBonds 16 _pdbe_chem_comp_rdkit_properties.NumHBD 5 _pdbe_chem_comp_rdkit_properties.NumHBA 6 _pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 28 _pdbe_chem_comp_rdkit_properties.NumAtoms 59 _pdbe_chem_comp_rdkit_properties.NumHeteroatoms 10 _pdbe_chem_comp_rdkit_properties.NumAmideBonds 2 _pdbe_chem_comp_rdkit_properties.FractionCSP3 0.556 _pdbe_chem_comp_rdkit_properties.NumRings 1 _pdbe_chem_comp_rdkit_properties.NumAromaticRings 1 _pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0 _pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0 _pdbe_chem_comp_rdkit_properties.NumHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0 _pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0 _pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0 _pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 2 _pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0 _pdbe_chem_comp_rdkit_properties.labuteASA 209.395 _pdbe_chem_comp_rdkit_properties.tpsa 142.780 _pdbe_chem_comp_rdkit_properties.CrippenClogP 1.470 _pdbe_chem_comp_rdkit_properties.CrippenMR 107.249 _pdbe_chem_comp_rdkit_properties.chi0v 14.172 _pdbe_chem_comp_rdkit_properties.chi1v 8.024 _pdbe_chem_comp_rdkit_properties.chi2v 2.771 _pdbe_chem_comp_rdkit_properties.chi3v 2.771 _pdbe_chem_comp_rdkit_properties.chi4v 1.724 _pdbe_chem_comp_rdkit_properties.chi0n 44.277 _pdbe_chem_comp_rdkit_properties.chi1n 21.591 _pdbe_chem_comp_rdkit_properties.chi2n 1.955 _pdbe_chem_comp_rdkit_properties.chi3n 1.955 _pdbe_chem_comp_rdkit_properties.chi4n 1.073 _pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.930 _pdbe_chem_comp_rdkit_properties.kappa1 5.031 _pdbe_chem_comp_rdkit_properties.kappa2 12.513 _pdbe_chem_comp_rdkit_properties.kappa3 10.416 _pdbe_chem_comp_rdkit_properties.Phi 2.248 # _pdbe_chem_comp_external_mappings.comp_id 8KK _pdbe_chem_comp_external_mappings.source UniChem _pdbe_chem_comp_external_mappings.resource PubChem _pdbe_chem_comp_external_mappings.resource_id 129009681 # loop_ _pdbe_chem_comp_rdkit_conformer.comp_id _pdbe_chem_comp_rdkit_conformer.atom_id _pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit _pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit _pdbe_chem_comp_rdkit_conformer.rdkit_method _pdbe_chem_comp_rdkit_conformer.rdkit_ordinal 8KK C10 0.417 -0.021 -0.479 ETKDGv3 1 8KK C11 2.880 0.259 -1.030 ETKDGv3 2 8KK C12 5.297 0.586 -1.449 ETKDGv3 3 8KK C13 6.441 1.327 -0.822 ETKDGv3 4 8KK C14 7.276 0.663 0.210 ETKDGv3 5 8KK C15 8.272 1.332 0.804 ETKDGv3 6 8KK C16 8.539 2.739 0.441 ETKDGv3 7 8KK O01 0.345 -1.609 1.904 ETKDGv3 8 8KK P01 0.304 -1.705 0.214 ETKDGv3 9 8KK N01 -1.144 -2.584 -0.307 ETKDGv3 10 8KK C01 -2.426 -1.863 -0.148 ETKDGv3 11 8KK C02 -2.748 -1.529 1.330 ETKDGv3 12 8KK C03 -2.703 -2.754 2.277 ETKDGv3 13 8KK C04 -2.769 -2.288 3.738 ETKDGv3 14 8KK C05 -3.846 -3.742 1.996 ETKDGv3 15 8KK C06 -2.556 -0.696 -1.112 ETKDGv3 16 8KK N02 -2.898 0.633 -0.677 ETKDGv3 17 8KK C07 -3.135 1.725 -1.620 ETKDGv3 18 8KK C08 -4.490 1.568 -2.325 ETKDGv3 19 8KK C09 -5.674 1.573 -1.348 ETKDGv3 20 8KK N03 -5.760 2.846 -0.637 ETKDGv3 21 8KK O02 -2.393 -0.919 -2.343 ETKDGv3 22 8KK O03 1.511 -2.494 -0.241 ETKDGv3 23 8KK N04 1.736 0.546 -0.218 ETKDGv3 24 8KK O04 4.113 0.824 -0.696 ETKDGv3 25 8KK C17 7.780 3.348 -0.478 ETKDGv3 26 8KK C18 6.676 2.614 -1.133 ETKDGv3 27 8KK O05 2.773 -0.491 -2.039 ETKDGv3 28 8KK H1 0.216 -0.040 -1.571 ETKDGv3 29 8KK H2 -0.346 0.613 0.014 ETKDGv3 30 8KK H3 5.149 0.922 -2.499 ETKDGv3 31 8KK H4 5.517 -0.504 -1.465 ETKDGv3 32 8KK H5 7.083 -0.367 0.486 ETKDGv3 33 8KK H6 8.882 0.845 1.554 ETKDGv3 34 8KK H7 9.346 3.275 0.922 ETKDGv3 35 8KK H8 1.194 -1.146 2.114 ETKDGv3 36 8KK H9 -1.013 -2.843 -1.312 ETKDGv3 37 8KK H10 -3.222 -2.564 -0.476 ETKDGv3 38 8KK H11 -2.035 -0.759 1.693 ETKDGv3 39 8KK H12 -3.764 -1.078 1.385 ETKDGv3 40 8KK H13 -1.741 -3.294 2.145 ETKDGv3 41 8KK H14 -2.706 -3.160 4.424 ETKDGv3 42 8KK H15 -1.916 -1.614 3.965 ETKDGv3 43 8KK H16 -3.719 -1.745 3.933 ETKDGv3 44 8KK H17 -4.830 -3.228 2.032 ETKDGv3 45 8KK H18 -3.844 -4.558 2.750 ETKDGv3 46 8KK H19 -3.718 -4.217 1.001 ETKDGv3 47 8KK H20 -2.923 0.872 0.338 ETKDGv3 48 8KK H21 -2.320 1.751 -2.375 ETKDGv3 49 8KK H22 -3.109 2.696 -1.078 ETKDGv3 50 8KK H23 -4.503 0.618 -2.900 ETKDGv3 51 8KK H24 -4.615 2.398 -3.055 ETKDGv3 52 8KK H25 -5.563 0.744 -0.616 ETKDGv3 53 8KK H26 -6.615 1.398 -1.917 ETKDGv3 54 8KK H27 -6.540 2.771 0.055 ETKDGv3 55 8KK H28 -6.040 3.585 -1.322 ETKDGv3 56 8KK H30 1.841 1.229 0.566 ETKDGv3 57 8KK H31 7.971 4.380 -0.742 ETKDGv3 58 8KK H32 6.062 3.129 -1.862 ETKDGv3 59 #