data_8FZ
#
_chem_comp.id 8FZ
_chem_comp.name (5-pyridin-3-yloxyfuran-2-yl)methanamine
_chem_comp.type NON-POLYMER
_chem_comp.pdbx_type HETAIN
_chem_comp.formula "C10 H10 N2 O2"
_chem_comp.mon_nstd_parent_comp_id ?
_chem_comp.pdbx_synonyms ?
_chem_comp.pdbx_formal_charge 0
_chem_comp.pdbx_initial_date 2017-02-06
_chem_comp.pdbx_modified_date 2018-02-23
_chem_comp.pdbx_ambiguous_flag N
_chem_comp.pdbx_release_status REL
_chem_comp.pdbx_replaced_by ?
_chem_comp.pdbx_replaces ?
_chem_comp.formula_weight 190.199
_chem_comp.one_letter_code ?
_chem_comp.three_letter_code 8FZ
_chem_comp.pdbx_model_coordinates_details ?
_chem_comp.pdbx_model_coordinates_missing_flag N
_chem_comp.pdbx_ideal_coordinates_details Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag N
_chem_comp.pdbx_model_coordinates_db_code 5N1D
_chem_comp.pdbx_subcomponent_list ?
_chem_comp.pdbx_processing_site EBI
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_backbone_atom_flag
_chem_comp_atom.pdbx_n_terminal_atom_flag
_chem_comp_atom.pdbx_c_terminal_atom_flag
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
8FZ C4 C1 C 0 1 Y N N N N N 13.516 100.171 28.009 -1.656 2.012 -0.181 C4 8FZ 1
8FZ C5 C2 C 0 1 Y N N N N N 14.045 99.919 26.776 -0.594 1.190 -0.025 C5 8FZ 2
8FZ C6 C3 C 0 1 Y N N N N N 15.859 99.630 25.230 1.648 0.564 -0.081 C6 8FZ 3
8FZ N1 N1 N 0 1 Y N N N N N 17.365 99.595 23.383 3.908 -0.067 0.067 N1 8FZ 4
8FZ C7 C4 C 0 1 Y N N N N N 15.878 98.269 25.319 1.270 -0.775 -0.106 C7 8FZ 5
8FZ C8 C5 C 0 1 Y N N N N N 16.671 97.560 24.441 2.261 -1.740 -0.041 C8 8FZ 6
8FZ C9 C6 C 0 1 Y N N N N N 17.386 98.255 23.491 3.583 -1.345 0.045 C9 8FZ 7
8FZ C10 C7 C 0 1 Y N N N N N 16.605 100.264 24.246 2.996 0.882 0.001 C10 8FZ 8
8FZ N N2 N 0 1 N N N N N N 11.138 96.651 26.767 -3.612 -1.893 -0.662 N 8FZ 9
8FZ C1 C8 C 0 1 N N N N N N 11.036 98.030 26.277 -3.285 -1.203 0.593 C1 8FZ 10
8FZ C2 C9 C 0 1 Y N N N N N 12.122 98.877 26.880 -2.396 -0.022 0.300 C2 8FZ 11
8FZ O1 O1 O 0 1 Y N N N N N 13.232 99.106 26.097 -1.051 -0.039 0.266 O1 8FZ 12
8FZ C3 C10 C 0 1 Y N N N N N 12.275 99.492 28.057 -2.814 1.227 0.029 C3 8FZ 13
8FZ O O2 O 0 1 N N N N N N 15.121 100.423 26.107 0.711 1.546 -0.143 O 8FZ 14
8FZ H7 H1 H 0 1 N N N N N N 13.957 100.770 28.792 -1.626 3.065 -0.417 H7 8FZ 15
8FZ H1 H2 H 0 1 N N N N N N 15.284 97.757 26.062 0.229 -1.055 -0.174 H1 8FZ 16
8FZ H9 H3 H 0 1 N N N N N N 16.730 96.483 24.497 2.005 -2.789 -0.058 H9 8FZ 17
8FZ H10 H4 H 0 1 N N N N N N 17.995 97.695 22.797 4.360 -2.093 0.101 H10 8FZ 18
8FZ H11 H5 H 0 1 N N N N N N 16.567 101.341 24.178 3.300 1.918 0.022 H11 8FZ 19
8FZ H2 H6 H 0 1 N N N N N N 10.412 96.097 26.360 -4.207 -2.689 -0.493 H2 8FZ 20
8FZ H3 H7 H 0 1 N N N N N N 12.028 96.272 26.513 -4.035 -1.259 -1.324 H3 8FZ 21
8FZ H5 H9 H 0 1 N N N N N N 11.137 98.035 25.182 -4.203 -0.858 1.068 H5 8FZ 22
8FZ H4 H10 H 0 1 N N N N N N 10.056 98.443 26.556 -2.767 -1.891 1.261 H4 8FZ 23
8FZ H6 H11 H 0 1 N N N N N N 11.584 99.474 28.886 -3.838 1.568 -0.014 H6 8FZ 24
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
8FZ N1 C9 DOUB Y N 1
8FZ N1 C10 SING Y N 2
8FZ C9 C8 SING Y N 3
8FZ C10 C6 DOUB Y N 4
8FZ C8 C7 DOUB Y N 5
8FZ C6 C7 SING Y N 6
8FZ C6 O SING N N 7
8FZ O1 C5 SING Y N 8
8FZ O1 C2 SING Y N 9
8FZ O C5 SING N N 10
8FZ C1 N SING N N 11
8FZ C1 C2 SING N N 12
8FZ C5 C4 DOUB Y N 13
8FZ C2 C3 DOUB Y N 14
8FZ C4 C3 SING Y N 15
8FZ C4 H7 SING N N 16
8FZ C7 H1 SING N N 17
8FZ C8 H9 SING N N 18
8FZ C9 H10 SING N N 19
8FZ C10 H11 SING N N 20
8FZ N H2 SING N N 21
8FZ N H3 SING N N 22
8FZ C1 H5 SING N N 23
8FZ C1 H4 SING N N 24
8FZ C3 H6 SING N N 25
#
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
8FZ InChI InChI 1.03 InChI=1S/C10H10N2O2/c11-6-8-3-4-10(13-8)14-9-2-1-5-12-7-9/h1-5,7H,6,11H2
8FZ InChIKey InChI 1.03 RJCYIPHSGLVRCJ-UHFFFAOYSA-N
8FZ SMILES_CANONICAL CACTVS 3.385 NCc1oc(Oc2cccnc2)cc1
8FZ SMILES CACTVS 3.385 NCc1oc(Oc2cccnc2)cc1
8FZ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 c1cc(cnc1)Oc2ccc(o2)CN
8FZ SMILES "OpenEye OEToolkits" 2.0.6 c1cc(cnc1)Oc2ccc(o2)CN
#
_pdbx_chem_comp_identifier.comp_id 8FZ
_pdbx_chem_comp_identifier.type "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version 2.0.6
_pdbx_chem_comp_identifier.identifier (5-pyridin-3-yloxyfuran-2-yl)methanamine
#
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
8FZ 'Create component' 2017-02-06 EBI
8FZ 'Initial release' 2018-02-28 RCSB
#
loop_
_software.name
_software.version
_software.description
rdkit 2025.03.3 'Core functionality.'
pdbeccdutils 1.0.0 'Wrapper to provide 2D templates and molecular fragments.'
#
loop_
_pdbe_chem_comp_atom_depiction.comp_id
_pdbe_chem_comp_atom_depiction.atom_id
_pdbe_chem_comp_atom_depiction.element
_pdbe_chem_comp_atom_depiction.model_Cartn_x
_pdbe_chem_comp_atom_depiction.model_Cartn_y
_pdbe_chem_comp_atom_depiction.pdbx_ordinal
8FZ C4 C 6.968 -0.075 1
8FZ C5 C 5.598 0.535 2
8FZ C6 C 4.299 -1.715 3
8FZ N1 N 3.000 -3.965 4
8FZ C7 C 5.598 -2.465 5
8FZ C8 C 5.598 -3.965 6
8FZ C9 C 4.299 -4.715 7
8FZ C10 C 3.000 -2.465 8
8FZ N N 9.324 3.865 9
8FZ C1 C 7.832 3.709 10
8FZ C2 C 7.222 2.338 11
8FZ O1 O 5.755 2.027 12
8FZ C3 C 7.972 1.040 13
8FZ O O 4.299 -0.215 14
#
loop_
_pdbe_chem_comp_bond_depiction.comp_id
_pdbe_chem_comp_bond_depiction.atom_id_1
_pdbe_chem_comp_bond_depiction.atom_id_2
_pdbe_chem_comp_bond_depiction.value_order
_pdbe_chem_comp_bond_depiction.bond_dir
_pdbe_chem_comp_bond_depiction.pdbx_ordinal
8FZ N1 C9 DOUBLE NONE 1
8FZ N1 C10 SINGLE NONE 2
8FZ C9 C8 SINGLE NONE 3
8FZ C10 C6 DOUBLE NONE 4
8FZ C8 C7 DOUBLE NONE 5
8FZ C6 C7 SINGLE NONE 6
8FZ C6 O SINGLE NONE 7
8FZ O1 C5 SINGLE NONE 8
8FZ O1 C2 SINGLE NONE 9
8FZ O C5 SINGLE NONE 10
8FZ C1 N SINGLE NONE 11
8FZ C1 C2 SINGLE NONE 12
8FZ C5 C4 DOUBLE NONE 13
8FZ C2 C3 DOUBLE NONE 14
8FZ C4 C3 SINGLE NONE 15
#
loop_
_pdbe_chem_comp_substructure.comp_id
_pdbe_chem_comp_substructure.substructure_name
_pdbe_chem_comp_substructure.id
_pdbe_chem_comp_substructure.substructure_type
_pdbe_chem_comp_substructure.substructure_smiles
_pdbe_chem_comp_substructure.substructure_inchis
_pdbe_chem_comp_substructure.substructure_inchikeys
8FZ MurckoScaffold S1 scaffold c1cncc(Oc2ccco2)c1 InChI=1S/C9H7NO2/c1-3-8(7-10-5-1)12-9-4-2-6-11-9/h1-7H LYBJLBMJHLJSQP-UHFFFAOYSA-N
8FZ furan F1 fragment c1ccoc1 InChI=1S/C4H4O/c1-2-4-5-3-1/h1-4H YLQBMQCUIZJEEH-UHFFFAOYSA-N
8FZ pyridine F2 fragment c1ccncc1 InChI=1S/C5H5N/c1-2-4-6-5-3-1/h1-5H JUJWROOIHBZHMG-UHFFFAOYSA-N
#
loop_
_pdbe_chem_comp_substructure_mapping.comp_id
_pdbe_chem_comp_substructure_mapping.atom_id
_pdbe_chem_comp_substructure_mapping.substructure_id
_pdbe_chem_comp_substructure_mapping.substructure_ordinal
8FZ C4 S1 1
8FZ C5 S1 1
8FZ C6 S1 1
8FZ N1 S1 1
8FZ C7 S1 1
8FZ C8 S1 1
8FZ C9 S1 1
8FZ C10 S1 1
8FZ C2 S1 1
8FZ O1 S1 1
8FZ C3 S1 1
8FZ O S1 1
8FZ C5 F1 1
8FZ C4 F1 1
8FZ C3 F1 1
8FZ C2 F1 1
8FZ O1 F1 1
8FZ C9 F2 1
8FZ C8 F2 1
8FZ C7 F2 1
8FZ C6 F2 1
8FZ C10 F2 1
8FZ N1 F2 1
#
_pdbe_chem_comp_rdkit_properties.comp_id 8FZ
_pdbe_chem_comp_rdkit_properties.exactmw 190.074
_pdbe_chem_comp_rdkit_properties.amw 190.202
_pdbe_chem_comp_rdkit_properties.lipinskiHBA 4
_pdbe_chem_comp_rdkit_properties.lipinskiHBD 2
_pdbe_chem_comp_rdkit_properties.NumRotatableBonds 4
_pdbe_chem_comp_rdkit_properties.NumHBD 1
_pdbe_chem_comp_rdkit_properties.NumHBA 4
_pdbe_chem_comp_rdkit_properties.NumHeavyAtoms 14
_pdbe_chem_comp_rdkit_properties.NumAtoms 24
_pdbe_chem_comp_rdkit_properties.NumHeteroatoms 4
_pdbe_chem_comp_rdkit_properties.NumAmideBonds 0
_pdbe_chem_comp_rdkit_properties.FractionCSP3 0.100
_pdbe_chem_comp_rdkit_properties.NumRings 2
_pdbe_chem_comp_rdkit_properties.NumAromaticRings 2
_pdbe_chem_comp_rdkit_properties.NumAliphaticRings 0
_pdbe_chem_comp_rdkit_properties.NumSaturatedRings 0
_pdbe_chem_comp_rdkit_properties.NumHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumAromaticHeterocycles 2
_pdbe_chem_comp_rdkit_properties.NumSaturatedHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumAliphaticHeterocycles 0
_pdbe_chem_comp_rdkit_properties.NumSpiroAtoms 0
_pdbe_chem_comp_rdkit_properties.NumBridgeheadAtoms 0
_pdbe_chem_comp_rdkit_properties.NumAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.NumUnspecifiedAtomStereoCenters 0
_pdbe_chem_comp_rdkit_properties.labuteASA 95.487
_pdbe_chem_comp_rdkit_properties.tpsa 61.280
_pdbe_chem_comp_rdkit_properties.CrippenClogP 0.946
_pdbe_chem_comp_rdkit_properties.CrippenMR 49.424
_pdbe_chem_comp_rdkit_properties.chi0v 6.711
_pdbe_chem_comp_rdkit_properties.chi1v 3.487
_pdbe_chem_comp_rdkit_properties.chi2v 1.214
_pdbe_chem_comp_rdkit_properties.chi3v 1.214
_pdbe_chem_comp_rdkit_properties.chi4v 0.709
_pdbe_chem_comp_rdkit_properties.chi0n 16.711
_pdbe_chem_comp_rdkit_properties.chi1n 8.382
_pdbe_chem_comp_rdkit_properties.chi2n 1.214
_pdbe_chem_comp_rdkit_properties.chi3n 1.214
_pdbe_chem_comp_rdkit_properties.chi4n 0.709
_pdbe_chem_comp_rdkit_properties.hallKierAlpha -1.810
_pdbe_chem_comp_rdkit_properties.kappa1 2.838
_pdbe_chem_comp_rdkit_properties.kappa2 3.932
_pdbe_chem_comp_rdkit_properties.kappa3 1.917
_pdbe_chem_comp_rdkit_properties.Phi 0.797
#
_pdbe_chem_comp_external_mappings.comp_id 8FZ
_pdbe_chem_comp_external_mappings.source UniChem
_pdbe_chem_comp_external_mappings.resource PubChem
_pdbe_chem_comp_external_mappings.resource_id 82504648
#
loop_
_pdbe_chem_comp_rdkit_conformer.comp_id
_pdbe_chem_comp_rdkit_conformer.atom_id
_pdbe_chem_comp_rdkit_conformer.Cartn_x_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_y_rdkit
_pdbe_chem_comp_rdkit_conformer.Cartn_z_rdkit
_pdbe_chem_comp_rdkit_conformer.rdkit_method
_pdbe_chem_comp_rdkit_conformer.rdkit_ordinal
8FZ C4 -1.306 -2.097 -0.601 ETKDGv3 1
8FZ C5 -0.364 -1.184 -0.426 ETKDGv3 2
8FZ C6 1.872 -0.512 0.422 ETKDGv3 3
8FZ N1 2.537 1.607 1.372 ETKDGv3 4
8FZ C7 3.309 -0.833 0.287 ETKDGv3 5
8FZ C8 4.234 0.051 0.673 ETKDGv3 6
8FZ C9 3.804 1.342 1.243 ETKDGv3 7
8FZ C10 1.523 0.671 0.965 ETKDGv3 8
8FZ N -3.748 1.586 -0.489 ETKDGv3 9
8FZ C1 -3.043 1.007 -1.629 ETKDGv3 10
8FZ C2 -2.139 -0.107 -1.191 ETKDGv3 11
8FZ O1 -0.825 0.076 -0.783 ETKDGv3 12
8FZ C3 -2.480 -1.386 -1.098 ETKDGv3 13
8FZ O 0.931 -1.471 0.019 ETKDGv3 14
8FZ H7 -1.212 -3.158 -0.411 ETKDGv3 15
8FZ H1 3.611 -1.784 -0.132 ETKDGv3 16
8FZ H9 5.287 -0.177 0.572 ETKDGv3 17
8FZ H10 4.542 2.067 1.558 ETKDGv3 18
8FZ H11 0.487 0.924 1.137 ETKDGv3 19
8FZ H2 -4.311 0.836 -0.025 ETKDGv3 20
8FZ H3 -3.044 1.929 0.205 ETKDGv3 21
8FZ H5 -2.436 1.795 -2.124 ETKDGv3 22
8FZ H4 -3.781 0.630 -2.369 ETKDGv3 23
8FZ H6 -3.446 -1.811 -1.337 ETKDGv3 24
#